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BibTeX records: Sven Thiele
@article{DBLP:journals/bioinformatics/ThieleKBSK22, author = {Sven Thiele and Axel von Kamp and Pavlos Stephanos Bekiaris and Philipp Schneider and Steffen Klamt}, title = {CNApy: a CellNetAnalyzer {GUI} in Python for analyzing and designing metabolic networks}, journal = {Bioinform.}, volume = {38}, number = {5}, pages = {1467--1469}, year = {2022}, url = {https://doi.org/10.1093/bioinformatics/btab828}, doi = {10.1093/BIOINFORMATICS/BTAB828}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/ThieleKBSK22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tcbb/ThieleHHBFSK19, author = {Sven Thiele and Sandra Heise and Wiebke Hessenkemper and Hannes Bongartz and Melissa Fensky and Fred Schaper and Steffen Klamt}, title = {Designing Optimal Experiments to Discriminate Interaction Graph Models}, journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.}, volume = {16}, number = {3}, pages = {925--935}, year = {2019}, url = {https://doi.org/10.1109/TCBB.2018.2812184}, doi = {10.1109/TCBB.2018.2812184}, timestamp = {Mon, 03 Apr 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/tcbb/ThieleHHBFSK19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/PrigentFDTLCGGE17, author = {Sylvain Prigent and Cl{\'{e}}mence Frioux and Simon M. Dittami and Sven Thiele and Abdelhalim Larhlimi and Guillaume Collet and Fabien Gutknecht and Jeanne Got and Damien Eveillard and J{\'{e}}r{\'{e}}mie Bourdon and Fr{\'{e}}d{\'{e}}ric Plewniak and Thierry Tonon and Anne Siegel}, title = {Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks}, journal = {PLoS Comput. Biol.}, volume = {13}, number = {1}, year = {2017}, url = {https://doi.org/10.1371/journal.pcbi.1005276}, doi = {10.1371/JOURNAL.PCBI.1005276}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/PrigentFDTLCGGE17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ThieleCSSGK15, author = {Sven Thiele and Luca Cerone and Julio Saez{-}Rodriguez and Anne Siegel and Carito Guziolowski and Steffen Klamt}, title = {Extended notions of sign consistency to relate experimental data to signaling and regulatory network topologies}, journal = {{BMC} Bioinform.}, volume = {16}, pages = {345:1--345:13}, year = {2015}, url = {https://doi.org/10.1186/s12859-015-0733-7}, doi = {10.1186/S12859-015-0733-7}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ThieleCSSGK15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tcs/VidelaGETGNSSS15, author = {Santiago Videla and Carito Guziolowski and Federica Eduati and Sven Thiele and Martin Gebser and Jacques Nicolas and Julio Saez{-}Rodriguez and Torsten Schaub and Anne Siegel}, title = {Learning Boolean logic models of signaling networks with {ASP}}, journal = {Theor. Comput. Sci.}, volume = {599}, pages = {79--101}, year = {2015}, url = {https://doi.org/10.1016/j.tcs.2014.06.022}, doi = {10.1016/J.TCS.2014.06.022}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/tcs/VidelaGETGNSSS15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/GuziolowskiVETCSS14, author = {Carito Guziolowski and Santiago Videla and Federica Eduati and Sven Thiele and Thomas Cokelaer and Anne Siegel and Julio Saez{-}Rodriguez}, title = {Exhaustively characterizing feasible logic models of a signaling network using Answer Set Programming}, journal = {Bioinform.}, volume = {30}, number = {13}, pages = {1942}, year = {2014}, url = {https://doi.org/10.1093/bioinformatics/btu357}, doi = {10.1093/BIOINFORMATICS/BTU357}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/GuziolowskiVETCSS14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/GuziolowskiVETCSS13, author = {Carito Guziolowski and Santiago Videla and Federica Eduati and Sven Thiele and Thomas Cokelaer and Anne Siegel and Julio Saez{-}Rodriguez}, title = {Exhaustively characterizing feasible logic models of a signaling network using Answer Set Programming}, journal = {Bioinform.}, volume = {29}, number = {18}, pages = {2320--2326}, year = {2013}, url = {https://doi.org/10.1093/bioinformatics/btt393}, doi = {10.1093/BIOINFORMATICS/BTT393}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/GuziolowskiVETCSS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/lpnmr/BordronEMST13, author = {Philippe Bordron and Damien Eveillard and Alejandro Maass and Anne Siegel and Sven Thiele}, editor = {Pedro Cabalar and Tran Cao Son}, title = {An {ASP} Application in Integrative Biology: Identification of Functional Gene Units}, booktitle = {Logic Programming and Nonmonotonic Reasoning, 12th International Conference, {LPNMR} 2013, Corunna, Spain, September 15-19, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8148}, pages = {206--218}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-40564-8\_21}, doi = {10.1007/978-3-642-40564-8\_21}, timestamp = {Sat, 05 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/lpnmr/BordronEMST13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/lpnmr/ColletEGPSST13, author = {Guillaume Collet and Damien Eveillard and Martin Gebser and Sylvain Prigent and Torsten Schaub and Anne Siegel and Sven Thiele}, editor = {Pedro Cabalar and Tran Cao Son}, title = {Extending the Metabolic Network of \emph{Ectocarpus Siliculosus} Using Answer Set Programming}, booktitle = {Logic Programming and Nonmonotonic Reasoning, 12th International Conference, {LPNMR} 2013, Corunna, Spain, September 15-19, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8148}, pages = {245--256}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-40564-8\_25}, doi = {10.1007/978-3-642-40564-8\_25}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/lpnmr/ColletEGPSST13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@phdthesis{DBLP:phd/dnb/Thiele12, author = {Sven Thiele}, title = {Modeling biological systems with Answer Set Programming}, school = {University of Potsdam}, year = {2012}, url = {http://opus.kobv.de/ubp/volltexte/2012/5938/}, urn = {urn:nbn:de:kobv:517-opus-59383}, timestamp = {Sat, 17 Jul 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/phd/dnb/Thiele12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/VidelaGETGSS12, author = {Santiago Videla and Carito Guziolowski and Federica Eduati and Sven Thiele and Niels Grabe and Julio Saez{-}Rodriguez and Anne Siegel}, editor = {David R. Gilbert and Monika Heiner}, title = {Revisiting the Training of Logic Models of Protein Signaling Networks with {ASP}}, booktitle = {Computational Methods in Systems Biology - 10th International Conference, {CMSB} 2012, London, UK, October 3-5, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7605}, pages = {342--361}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-33636-2\_20}, doi = {10.1007/978-3-642-33636-2\_20}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/VidelaGETGSS12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1210-0690, author = {Santiago Videla and Carito Guziolowski and Federica Eduati and Sven Thiele and Niels Grabe and Julio Saez{-}Rodriguez and Anne Siegel}, title = {Revisiting the Training of Logic Models of Protein Signaling Networks with a Formal Approach based on Answer Set Programming}, journal = {CoRR}, volume = {abs/1210.0690}, year = {2012}, url = {http://arxiv.org/abs/1210.0690}, eprinttype = {arXiv}, eprint = {1210.0690}, timestamp = {Mon, 13 Aug 2018 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-1210-0690.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tplp/GebserSTV11, author = {Martin Gebser and Torsten Schaub and Sven Thiele and Philippe Veber}, title = {Detecting inconsistencies in large biological networks with answer set programming}, journal = {Theory Pract. Log. Program.}, volume = {11}, number = {2-3}, pages = {323--360}, year = {2011}, url = {https://doi.org/10.1017/S1471068410000554}, doi = {10.1017/S1471068410000554}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/tplp/GebserSTV11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ictai/GebserKSTV10, author = {Martin Gebser and Arne K{\"{o}}nig and Torsten Schaub and Sven Thiele and Philippe Veber}, title = {The BioASP Library: {ASP} Solutions for Systems Biology}, booktitle = {22nd {IEEE} International Conference on Tools with Artificial Intelligence, {ICTAI} 2010, Arras, France, 27-29 October 2010 - Volume 1}, pages = {383--389}, publisher = {{IEEE} Computer Society}, year = {2010}, url = {https://doi.org/10.1109/ICTAI.2010.62}, doi = {10.1109/ICTAI.2010.62}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/ictai/GebserKSTV10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/kr/GebserGISSTV10, author = {Martin Gebser and Carito Guziolowski and Mihail Ivanchev and Torsten Schaub and Anne Siegel and Sven Thiele and Philippe Veber}, editor = {Fangzhen Lin and Ulrike Sattler and Miroslaw Truszczynski}, title = {Repair and Prediction (under Inconsistency) in Large Biological Networks with Answer Set Programming}, booktitle = {Principles of Knowledge Representation and Reasoning: Proceedings of the Twelfth International Conference, {KR} 2010, Toronto, Ontario, Canada, May 9-13, 2010}, publisher = {{AAAI} Press}, year = {2010}, url = {http://aaai.org/ocs/index.php/KR/KR2010/paper/view/1334}, timestamp = {Tue, 08 Mar 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/kr/GebserGISSTV10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1007-0134, author = {Martin Gebser and Torsten Schaub and Sven Thiele and Philippe Veber}, title = {Detecting Inconsistencies in Large Biological Networks with Answer Set Programming}, journal = {CoRR}, volume = {abs/1007.0134}, year = {2010}, url = {http://arxiv.org/abs/1007.0134}, eprinttype = {arXiv}, eprint = {1007.0134}, timestamp = {Mon, 13 Aug 2018 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-1007-0134.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/iclp/SchaubT09, author = {Torsten Schaub and Sven Thiele}, editor = {Patricia M. Hill and David Scott Warren}, title = {Metabolic Network Expansion with Answer Set Programming}, booktitle = {Logic Programming, 25th International Conference, {ICLP} 2009, Pasadena, CA, USA, July 14-17, 2009. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5649}, pages = {312--326}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-02846-5\_27}, doi = {10.1007/978-3-642-02846-5\_27}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/iclp/SchaubT09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/lpnmr/GebserKOST09, author = {Martin Gebser and Roland Kaminski and Max Ostrowski and Torsten Schaub and Sven Thiele}, editor = {Esra Erdem and Fangzhen Lin and Torsten Schaub}, title = {On the Input Language of {ASP} Grounder Gringo}, booktitle = {Logic Programming and Nonmonotonic Reasoning, 10th International Conference, {LPNMR} 2009, Potsdam, Germany, September 14-18, 2009. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5753}, pages = {502--508}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-04238-6\_49}, doi = {10.1007/978-3-642-04238-6\_49}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/lpnmr/GebserKOST09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/iclp/GebserSTUV08, author = {Martin Gebser and Torsten Schaub and Sven Thiele and Bj{\"{o}}rn Usadel and Philippe Veber}, editor = {Maria Garcia de la Banda and Enrico Pontelli}, title = {Detecting Inconsistencies in Large Biological Networks with Answer Set Programming}, booktitle = {Logic Programming, 24th International Conference, {ICLP} 2008, Udine, Italy, December 9-13 2008, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5366}, pages = {130--144}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-89982-2\_19}, doi = {10.1007/978-3-540-89982-2\_19}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/iclp/GebserSTUV08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/iclp/GebserKKOST08, author = {Martin Gebser and Roland Kaminski and Benjamin Kaufmann and Max Ostrowski and Torsten Schaub and Sven Thiele}, editor = {Maria Garcia de la Banda and Enrico Pontelli}, title = {Engineering an Incremental {ASP} Solver}, booktitle = {Logic Programming, 24th International Conference, {ICLP} 2008, Udine, Italy, December 9-13 2008, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5366}, pages = {190--205}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-89982-2\_23}, doi = {10.1007/978-3-540-89982-2\_23}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/iclp/GebserKKOST08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ecsqaru/DelgrandeLST07, author = {James P. Delgrande and Daphne H. Liu and Torsten Schaub and Sven Thiele}, editor = {Khaled Mellouli}, title = {{COBA} 2.0: {A} Consistency-Based Belief Change System}, booktitle = {Symbolic and Quantitative Approaches to Reasoning with Uncertainty, 9th European Conference, {ECSQARU} 2007, Hammamet, Tunisia, October 31 - November 2, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4724}, pages = {78--90}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-75256-1\_10}, doi = {10.1007/978-3-540-75256-1\_10}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/ecsqaru/DelgrandeLST07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/lpnmr/GebserST07, author = {Martin Gebser and Torsten Schaub and Sven Thiele}, editor = {Chitta Baral and Gerhard Brewka and John S. Schlipf}, title = {GrinGo : {A} New Grounder for Answer Set Programming}, booktitle = {Logic Programming and Nonmonotonic Reasoning, 9th International Conference, {LPNMR} 2007, Tempe, AZ, USA, May 15-17, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4483}, pages = {266--271}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72200-7\_24}, doi = {10.1007/978-3-540-72200-7\_24}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/lpnmr/GebserST07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ecai/GressmannJMSTT06, author = {Jean Gressmann and Tomi Janhunen and Robert E. Mercer and Torsten Schaub and Sven Thiele and Richard Tichy}, editor = {Gerhard Brewka and Silvia Coradeschi and Anna Perini and Paolo Traverso}, title = {On Probing and Multi-Threading in Platypus}, booktitle = {{ECAI} 2006, 17th European Conference on Artificial Intelligence, August 29 - September 1, 2006, Riva del Garda, Italy, Including Prestigious Applications of Intelligent Systems {(PAIS} 2006), Proceedings}, series = {Frontiers in Artificial Intelligence and Applications}, volume = {141}, pages = {392--396}, publisher = {{IOS} Press}, year = {2006}, timestamp = {Thu, 12 Feb 2009 12:51:20 +0100}, biburl = {https://dblp.org/rec/conf/ecai/GressmannJMSTT06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/lpnmr/GressmannJMSTT05, author = {Jean Gressmann and Tomi Janhunen and Robert E. Mercer and Torsten Schaub and Sven Thiele and Richard Tichy}, editor = {Chitta Baral and Gianluigi Greco and Nicola Leone and Giorgio Terracina}, title = {Platypus: {A} Platform for Distributed Answer Set Solving}, booktitle = {Logic Programming and Nonmonotonic Reasoning, 8th International Conference, {LPNMR} 2005, Diamante, Italy, September 5-8, 2005, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {3662}, pages = {227--239}, publisher = {Springer}, year = {2005}, url = {https://doi.org/10.1007/11546207\_18}, doi = {10.1007/11546207\_18}, timestamp = {Tue, 14 May 2019 10:00:48 +0200}, biburl = {https://dblp.org/rec/conf/lpnmr/GressmannJMSTT05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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