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BibTeX records: Falk Schreiber
@article{DBLP:journals/jcheminf/JaegerHonzKS24, author = {Sabrina Jaeger{-}Honz and Karsten Klein and Falk Schreiber}, title = {Systematic analysis, aggregation and visualisation of interaction fingerprints for molecular dynamics simulation data}, journal = {J. Cheminformatics}, volume = {16}, number = {1}, pages = {28}, year = {2024}, url = {https://doi.org/10.1186/s13321-024-00822-3}, doi = {10.1186/S13321-024-00822-3}, timestamp = {Thu, 21 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcheminf/JaegerHonzKS24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/GolebiewskiBGGKKMNSWS24, author = {Martin Golebiewski and Gary D. Bader and Padraig Gleeson and Thomas E. Gorochowski and Sarah M. Keating and Matthias K{\"{o}}nig and Chris J. Myers and David P. Nickerson and Bj{\"{o}}rn Sommer and Dagmar Waltemath and Falk Schreiber}, title = {Specifications of standards in systems and synthetic biology: status, developments, and tools in 2024}, journal = {J. Integr. Bioinform.}, volume = {21}, number = {1}, year = {2024}, url = {https://doi.org/10.1515/jib-2024-0015}, doi = {10.1515/JIB-2024-0015}, timestamp = {Sun, 08 Sep 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jib/GolebiewskiBGGKKMNSWS24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tvcg/FeyerPKBKKBSK24, author = {Stefan P. Feyer and Bruno Pinaud and Stephen G. Kobourov and Nicolas Brich and Michael Krone and Andreas Kerren and Michael Behrisch and Falk Schreiber and Karsten Klein}, title = {2D, 2.5D, or 3D? An Exploratory Study on Multilayer Network Visualisations in Virtual Reality}, journal = {{IEEE} Trans. Vis. Comput. Graph.}, volume = {30}, number = {1}, pages = {469--479}, year = {2024}, url = {https://doi.org/10.1109/TVCG.2023.3327402}, doi = {10.1109/TVCG.2023.3327402}, timestamp = {Sat, 13 Jan 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/tvcg/FeyerPKBKKBSK24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@misc{DBLP:data/10/AichemKKS24, author = {Michael Aichem and Karsten Klein and Stephen G. Kobourov and Falk Schreiber}, title = {Supplemental Materials for: "De-emphasise, Aggregate, and Hide: {A} Study on Interactive Visual Transformations for Group Structures in Network Visualisations" {(2.0)}}, publisher = {DaRUS}, year = {2024}, month = feb, howpublished = {\url{https://darus.uni-stuttgart.de/dataset.xhtml?persistentId=doi:10.18419/darus-3706{\&}version=2.0}}, note = {Accessed on YYYY-MM-DD.}, url = {https://darus.uni-stuttgart.de/dataset.xhtml?persistentId=doi:10.18419/darus-3706\&\#38;version=2.0}, timestamp = {Tue, 18 Jun 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/data/10/AichemKKS24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2407-00511, author = {Kathryn Gray and Brian Bell and Diana Sieper and Stephen G. Kobourov and Falk Schreiber and Karsten Klein and Seokhee Hong}, title = {Wooly Graphs : {A} Mathematical Framework For Knitting}, journal = {CoRR}, volume = {abs/2407.00511}, year = {2024}, url = {https://doi.org/10.48550/arXiv.2407.00511}, doi = {10.48550/ARXIV.2407.00511}, eprinttype = {arXiv}, eprint = {2407.00511}, timestamp = {Tue, 13 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-2407-00511.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/KernJSS23, author = {Martin Kern and Sabrina Jaeger{-}Honz and Falk Schreiber and Bj{\"{o}}rn Sommer}, title = {APL@voro - interactive visualization and analysis of cell membrane simulations}, journal = {Bioinform.}, volume = {39}, number = {2}, year = {2023}, url = {https://doi.org/10.1093/bioinformatics/btad083}, doi = {10.1093/BIOINFORMATICS/BTAD083}, timestamp = {Fri, 22 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/KernJSS23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/KonigGGGHKMNSWS23, author = {Matthias K{\"{o}}nig and Padraig Gleeson and Martin Golebiewski and Thomas E. Gorochowski and Michael Hucka and Sarah M. Keating and Chris J. Myers and David P. Nickerson and Bj{\"{o}}rn Sommer and Dagmar Waltemath and Falk Schreiber}, title = {Specifications of standards in systems and synthetic biology: status and developments in 2022 and the {COMBINE} meeting 2022}, journal = {J. Integr. Bioinform.}, volume = {20}, number = {1}, year = {2023}, url = {https://doi.org/10.1515/jib-2023-0004}, doi = {10.1515/JIB-2023-0004}, timestamp = {Wed, 17 May 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jib/KonigGGGHKMNSWS23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/vciba/ZhangKSS23, author = {Ying Zhang and Karsten Klein and Falk Schreiber and Kamran Safi}, title = {Beyond the horizon: immersive developments for animal ecology research}, journal = {Vis. Comput. Ind. Biomed. Art}, volume = {6}, number = {1}, pages = {11}, year = {2023}, url = {https://doi.org/10.1186/s42492-023-00138-3}, doi = {10.1186/S42492-023-00138-3}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/vciba/ZhangKSS23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gd/EadesGKESHS23, author = {Peter Eades and Niklas Gr{\"{o}}ne and Karsten Klein and Patrick Eades and Leo Schreiber and Ulf Hailer and Falk Schreiber}, editor = {Michael A. Bekos and Markus Chimani}, title = {CelticGraph: Drawing Graphs as Celtic Knots and Links}, booktitle = {Graph Drawing and Network Visualization - 31st International Symposium, {GD} 2023, Isola delle Femmine, Palermo, Italy, September 20-22, 2023, Revised Selected Papers, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14465}, pages = {18--35}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-3-031-49272-3\_2}, doi = {10.1007/978-3-031-49272-3\_2}, timestamp = {Fri, 26 Jan 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/gd/EadesGKESHS23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@misc{DBLP:data/10/AichemKKS23, author = {Michael Aichem and Karsten Klein and Stephen G. Kobourov and Falk Schreiber}, title = {Supplemental Materials for: "De-emphasise, Aggregate, and Hide: Exploring the Effects of Group-Based Visual Transformations for Interactive Clutter Reduction in Network Visualisations" {(1.0)}}, publisher = {DaRUS}, year = {2023}, month = sep, howpublished = {\url{https://darus.uni-stuttgart.de/dataset.xhtml?persistentId=doi:10.18419/darus-3706{\&}version=1.0}}, note = {Accessed on YYYY-MM-DD.}, url = {https://darus.uni-stuttgart.de/dataset.xhtml?persistentId=doi:10.18419/darus-3706\&\#38;version=1.0}, timestamp = {Tue, 18 Jun 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/data/10/AichemKKS23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@misc{DBLP:data/10/FeyerPKBKKSK23, author = {Stefan P. Feyer and Bruno Pinaud and Stephen G. Kobourov and Nicolas Brich and Michael Krone and Andreas Kerren and Falk Schreiber and Karsten Klein}, title = {Supplemental Material: "2D, 2.5D, or 3D? An Exploratory Study on Multilayer Network Visualizations in Virtual Reality" {(1.0)}}, publisher = {DaRUS}, year = {2023}, month = aug, howpublished = {\url{https://darus.uni-stuttgart.de/dataset.xhtml?persistentId=doi:10.18419/darus-3387{\&}version=1.0}}, note = {Accessed on YYYY-MM-DD.}, url = {https://darus.uni-stuttgart.de/dataset.xhtml?persistentId=doi:10.18419/darus-3387\&\#38;version=1.0}, timestamp = {Tue, 18 Jun 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/data/10/FeyerPKBKKSK23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@misc{DBLP:data/10/GarkovMBWS23, author = {Dimitar Garkov and Christoph M{\"{u}}ller and Matthias Braun and Daniel Weiskopf and Falk Schreiber}, title = {"Research Data Curation in Visualization : Position Paper" (Data) {(1.2)}}, publisher = {DaRUS}, year = {2023}, month = jan, howpublished = {\url{https://darus.uni-stuttgart.de/dataset.xhtml?persistentId=doi:10.18419/darus-3144{\&}version=1.2}}, note = {Accessed on YYYY-MM-DD.}, url = {https://darus.uni-stuttgart.de/dataset.xhtml?persistentId=doi:10.18419/darus-3144\&\#38;version=1.2}, timestamp = {Tue, 18 Jun 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/data/10/GarkovMBWS23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@misc{DBLP:data/10/GarkovMBWS23a, author = {Dimitar Garkov and Christoph M{\"{u}}ller and Matthias Braun and Daniel Weiskopf and Falk Schreiber}, title = {"Research Data Curation in Visualization : Position Paper" (Data) {(1.3)}}, publisher = {DaRUS}, year = {2023}, month = aug, howpublished = {\url{https://darus.uni-stuttgart.de/dataset.xhtml?persistentId=doi:10.18419/darus-3144{\&}version=1.3}}, note = {Accessed on YYYY-MM-DD.}, url = {https://darus.uni-stuttgart.de/dataset.xhtml?persistentId=doi:10.18419/darus-3144\&\#38;version=1.3}, timestamp = {Tue, 18 Jun 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/data/10/GarkovMBWS23a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2307-10674, author = {Stefan P. Feyer and Bruno Pinaud and Stephen G. Kobourov and Nicolas Brich and Michael Krone and Andreas Kerren and Michael Behrisch and Falk Schreiber and Karsten Klein}, title = {2D, 2.5D, or 3D? An Exploratory Study on Multilayer Network Visualisations in Virtual Reality}, journal = {CoRR}, volume = {abs/2307.10674}, year = {2023}, url = {https://doi.org/10.48550/arXiv.2307.10674}, doi = {10.48550/ARXIV.2307.10674}, eprinttype = {arXiv}, eprint = {2307.10674}, timestamp = {Wed, 26 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-2307-10674.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2309-02852, author = {Peter Eades and Niklas Gr{\"{o}}ne and Karsten Klein and Patrick Eades and Leo Schreiber and Ulf Hailer and Falk Schreiber}, title = {CelticGraph: Drawing Graphs as Celtic Knots and Links}, journal = {CoRR}, volume = {abs/2309.02852}, year = {2023}, url = {https://doi.org/10.48550/arXiv.2309.02852}, doi = {10.48550/ARXIV.2309.02852}, eprinttype = {arXiv}, eprint = {2309.02852}, timestamp = {Fri, 22 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-2309-02852.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bib/NiarakisWGSKNCS22, author = {Anna Niarakis and Dagmar Waltemath and James A. Glazier and Falk Schreiber and Sarah M. Keating and David P. Nickerson and Claudine Chaouiya and Anne Siegel and Vincent No{\"{e}}l and Henning Hermjakob and Tom{\'{a}}s Helikar and Sylvain Soliman and Laurence Calzone}, title = {Addressing \emph{barriers in comprehensiveness, accessibility, reusability, interoperability and reproducibility of computational models in systems biology}}, journal = {Briefings Bioinform.}, volume = {23}, number = {4}, year = {2022}, url = {https://doi.org/10.1093/bib/bbac212}, doi = {10.1093/BIB/BBAC212}, timestamp = {Sat, 08 Jun 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bib/NiarakisWGSKNCS22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/cgf/KrausFSKEKS22, author = {Matthias Kraus and Johannes Fuchs and Bj{\"{o}}rn Sommer and Karsten Klein and Ulrich Engelke and Daniel A. Keim and Falk Schreiber}, title = {Immersive Analytics with Abstract 3D Visualizations: {A} Survey}, journal = {Comput. Graph. Forum}, volume = {41}, number = {1}, pages = {201--229}, year = {2022}, url = {https://doi.org/10.1111/cgf.14430}, doi = {10.1111/CGF.14430}, timestamp = {Thu, 18 Apr 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/cgf/KrausFSKEKS22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/it/SchreiberW22, author = {Falk Schreiber and Daniel Weiskopf}, title = {Quantitative visual computing}, journal = {it Inf. Technol.}, volume = {64}, number = {4-5}, pages = {119--120}, year = {2022}, url = {https://doi.org/10.1515/itit-2022-0048}, doi = {10.1515/ITIT-2022-0048}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/it/SchreiberW22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/it/KleinSS22, author = {Karsten Klein and Michael Sedlmair and Falk Schreiber}, title = {Immersive analytics: An overview}, journal = {it Inf. Technol.}, volume = {64}, number = {4-5}, pages = {155--168}, year = {2022}, url = {https://doi.org/10.1515/itit-2022-0037}, doi = {10.1515/ITIT-2022-0037}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/it/KleinSS22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/SchreiberC22, author = {Falk Schreiber and Tobias Czauderna}, title = {Design considerations for representing systems biology information with the Systems Biology Graphical Notation}, journal = {J. Integr. Bioinform.}, volume = {19}, number = {2}, year = {2022}, url = {https://doi.org/10.1515/jib-2022-0024}, doi = {10.1515/JIB-2022-0024}, timestamp = {Mon, 26 Sep 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jib/SchreiberC22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/AichemKCGZLS22, author = {Michael Aichem and Karsten Klein and Tobias Czauderna and Dimitar Garkov and Jinxin Zhao and Jian Li and Falk Schreiber}, title = {Towards a hybrid user interface for the visual exploration of large biomolecular networks using virtual reality}, journal = {J. Integr. Bioinform.}, volume = {19}, number = {4}, year = {2022}, url = {https://doi.org/10.1515/jib-2022-0034}, doi = {10.1515/JIB-2022-0034}, timestamp = {Tue, 31 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jib/AichemKCGZLS22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tvcg/JoosJSK022, author = {Lucas Joos and Sabrina Jaeger{-}Honz and Falk Schreiber and Daniel A. Keim and Karsten Klein}, title = {Visual Comparison of Networks in {VR}}, journal = {{IEEE} Trans. Vis. Comput. Graph.}, volume = {28}, number = {11}, pages = {3651--3661}, year = {2022}, url = {https://doi.org/10.1109/TVCG.2022.3203001}, doi = {10.1109/TVCG.2022.3203001}, timestamp = {Fri, 04 Nov 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/tvcg/JoosJSK022.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/vciba/BienrothNGKJRS22, author = {Denis Bienroth and Hieu T. Nim and Dimitar Garkov and Karsten Klein and Sabrina Jaeger{-}Honz and Mirana Ramialison and Falk Schreiber}, title = {Spatially resolved transcriptomics in immersive environments}, journal = {Vis. Comput. Ind. Biomed. Art}, volume = {5}, number = {1}, pages = {2}, year = {2022}, url = {https://doi.org/10.1186/s42492-021-00098-6}, doi = {10.1186/S42492-021-00098-6}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/vciba/BienrothNGKJRS22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/beliv/GarkovMBWS22, author = {Dimitar Garkov and Christoph M{\"{u}}ller and Matthias Braun and Daniel Weiskopf and Falk Schreiber}, title = {Research Data Curation in Visualization : Position Paper}, booktitle = {{IEEE} Evaluation and Beyond - Methodological Approaches for Visualization, {BELIV} 2022, Oklahoma City, OK, USA, October 17, 2022}, pages = {56--65}, publisher = {{IEEE}}, year = {2022}, url = {https://doi.org/10.1109/BELIV57783.2022.00011}, doi = {10.1109/BELIV57783.2022.00011}, timestamp = {Sun, 12 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/beliv/GarkovMBWS22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@misc{DBLP:data/10/GarkovMBWS22, author = {Dimitar Garkov and Christoph M{\"{u}}ller and Matthias Braun and Daniel Weiskopf and Falk Schreiber}, title = {"Research Data Curation in Visualization : Position Paper" (Data) {(1.0)}}, publisher = {DaRUS}, year = {2022}, month = sep, howpublished = {\url{https://darus.uni-stuttgart.de/dataset.xhtml?persistentId=doi:10.18419/darus-3144{\&}version=1.0}}, note = {Accessed on YYYY-MM-DD.}, url = {https://darus.uni-stuttgart.de/dataset.xhtml?persistentId=doi:10.18419/darus-3144\&\#38;version=1.0}, timestamp = {Tue, 18 Jun 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/data/10/GarkovMBWS22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@misc{DBLP:data/10/GarkovMBWS22a, author = {Dimitar Garkov and Christoph M{\"{u}}ller and Matthias Braun and Daniel Weiskopf and Falk Schreiber}, title = {"Research Data Curation in Visualization : Position Paper" (Data) {(1.1)}}, publisher = {DaRUS}, year = {2022}, month = nov, howpublished = {\url{https://darus.uni-stuttgart.de/dataset.xhtml?persistentId=doi:10.18419/darus-3144{\&}version=1.1}}, note = {Accessed on YYYY-MM-DD.}, url = {https://darus.uni-stuttgart.de/dataset.xhtml?persistentId=doi:10.18419/darus-3144\&\#38;version=1.1}, timestamp = {Tue, 18 Jun 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/data/10/GarkovMBWS22a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@misc{DBLP:data/10/GarkovMKES22, author = {Dimitar Garkov and Christoph M{\"{u}}ller and Karsten Klein and Thomas Ertl and Falk Schreiber}, title = {Guidelines on Replication and Research Data Management by Task Force {A} {(1.0)}}, publisher = {DaRUS}, year = {2022}, month = may, howpublished = {\url{https://darus.uni-stuttgart.de/dataset.xhtml?persistentId=doi:10.18419/darus-2843{\&}version=1.0}}, note = {Accessed on YYYY-MM-DD.}, url = {https://darus.uni-stuttgart.de/dataset.xhtml?persistentId=doi:10.18419/darus-2843\&\#38;version=1.0}, timestamp = {Tue, 18 Jun 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/data/10/GarkovMKES22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/biodb/KleinGRBS21, author = {Karsten Klein and Dimitar Garkov and Sina R{\"{u}}tschlin and Thomas B{\"{o}}ttcher and Falk Schreiber}, title = {{QSDB} - a graphical Quorum Sensing Database}, journal = {Database J. Biol. Databases Curation}, volume = {2021}, year = {2021}, url = {https://doi.org/10.1093/database/baab058}, doi = {10.1093/DATABASE/BAAB058}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/biodb/KleinGRBS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/biodb/KleinGRBS21a, author = {Karsten Klein and Dimitar Garkov and Sina R{\"{u}}tschlin and Thomas B{\"{o}}ttcher and Falk Schreiber}, title = {Corrigendum to: {QSDB} - a graphical Quorum Sensing Database}, journal = {Database J. Biol. Databases Curation}, volume = {2021}, year = {2021}, url = {https://doi.org/10.1093/database/baab071}, doi = {10.1093/DATABASE/BAAB071}, timestamp = {Wed, 22 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/biodb/KleinGRBS21a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/AichemCZZKKLS21, author = {Michael Aichem and Tobias Czauderna and Yan Zhu and Jinxin Zhao and Matthias Klapperst{\"{u}}ck and Karsten Klein and Jian Li and Falk Schreiber}, title = {Visual exploration of large metabolic models}, journal = {Bioinform.}, volume = {37}, number = {23}, pages = {4460--4468}, year = {2021}, url = {https://doi.org/10.1093/bioinformatics/btab335}, doi = {10.1093/BIOINFORMATICS/BTAB335}, timestamp = {Wed, 20 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/AichemCZZKKLS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/cga/KrausKFKSSR21, author = {Matthias Kraus and Karsten Klein and Johannes Fuchs and Daniel A. Keim and Falk Schreiber and Michael Sedlmair and Theresa{-}Marie Rhyne}, title = {The Value of Immersive Visualization}, journal = {{IEEE} Computer Graphics and Applications}, volume = {41}, number = {4}, pages = {125--132}, year = {2021}, url = {https://doi.org/10.1109/MCG.2021.3075258}, doi = {10.1109/MCG.2021.3075258}, timestamp = {Thu, 18 Apr 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/cga/KrausKFKSSR21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/SchreiberGGGHKK21, author = {Falk Schreiber and Padraig Gleeson and Martin Golebiewski and Thomas E. Gorochowski and Michael Hucka and Sarah M. Keating and Matthias K{\"{o}}nig and Chris J. Myers and David P. Nickerson and Bj{\"{o}}rn Sommer and Dagmar Waltemath}, title = {Specifications of standards in systems and synthetic biology: status and developments in 2021}, journal = {J. Integr. Bioinform.}, volume = {18}, number = {3}, year = {2021}, url = {https://doi.org/10.1515/jib-2021-0026}, doi = {10.1515/JIB-2021-0026}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jib/SchreiberGGGHKK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jvis/KleinJMWHBS21, author = {Karsten Klein and Sabrina Jaeger and J{\"{o}}rg Melzheimer and Bettina Wachter and Heribert Hofer and Artur Baltabayev and Falk Schreiber}, title = {Visual analytics of sensor movement data for cheetah behaviour analysis}, journal = {J. Vis.}, volume = {24}, number = {4}, pages = {807--825}, year = {2021}, url = {https://doi.org/10.1007/s12650-021-00742-6}, doi = {10.1007/S12650-021-00742-6}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jvis/KleinJMWHBS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jvis/KleinAZESS21, author = {Karsten Klein and Michael Aichem and Ying Zhang and Stefan Erk and Bj{\"{o}}rn Sommer and Falk Schreiber}, title = {TEAMwISE: synchronised immersive environments for exploration and analysis of animal behaviour}, journal = {J. Vis.}, volume = {24}, number = {4}, pages = {845--859}, year = {2021}, url = {https://doi.org/10.1007/s12650-021-00746-2}, doi = {10.1007/S12650-021-00746-2}, timestamp = {Wed, 08 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jvis/KleinAZESS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/SchreiberSCGGHK20, author = {Falk Schreiber and Bj{\"{o}}rn Sommer and Tobias Czauderna and Martin Golebiewski and Thomas E. Gorochowski and Michael Hucka and Sarah M. Keating and Matthias K{\"{o}}nig and Chris J. Myers and David P. Nickerson and Dagmar Waltemath}, title = {Specifications of standards in systems and synthetic biology: status and developments in 2020}, journal = {J. Integr. Bioinform.}, volume = {17}, number = {2-3}, year = {2020}, url = {https://doi.org/10.1515/jib-2020-0022}, doi = {10.1515/JIB-2020-0022}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jib/SchreiberSCGGHK20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/WaltemathGBGHHI20, author = {Dagmar Waltemath and Martin Golebiewski and Michael L. Blinov and Padraig Gleeson and Henning Hermjakob and Michael Hucka and Esther Thea Inau and Sarah M. Keating and Matthias K{\"{o}}nig and Olga Krebs and Rahuman S. Malik{-}Sheriff and David P. Nickerson and Ernst Oberortner and Herbert M. Sauro and Falk Schreiber and Lucian P. Smith and Melanie I. Stefan and Ulrike Wittig and Chris J. Myers}, title = {The first 10 years of the international coordination network for standards in systems and synthetic biology {(COMBINE)}}, journal = {J. Integr. Bioinform.}, volume = {17}, number = {2-3}, year = {2020}, url = {https://doi.org/10.1515/jib-2020-0005}, doi = {10.1515/JIB-2020-0005}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jib/WaltemathGBGHHI20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apvis/KotlarekKMEK0S20, author = {Joseph Kotlarek and Oh{-}Hyun Kwon and Kwan{-}Liu Ma and Peter Eades and Andreas Kerren and Karsten Klein and Falk Schreiber}, title = {A Study of Mental Maps in Immersive Network Visualization}, booktitle = {2020 {IEEE} Pacific Visualization Symposium, PacificVis 2020, Tianjin, China, June 3-5, 2020}, pages = {1--10}, publisher = {{IEEE}}, year = {2020}, url = {https://doi.org/10.1109/PacificVis48177.2020.4722}, doi = {10.1109/PACIFICVIS48177.2020.4722}, timestamp = {Tue, 19 May 2020 18:04:13 +0200}, biburl = {https://dblp.org/rec/conf/apvis/KotlarekKMEK0S20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2001-06462, author = {Joseph Kotlarek and Oh{-}Hyun Kwon and Kwan{-}Liu Ma and Peter Eades and Andreas Kerren and Karsten Klein and Falk Schreiber}, title = {A Study of Mental Maps in Immersive Network Visualization}, journal = {CoRR}, volume = {abs/2001.06462}, year = {2020}, url = {https://arxiv.org/abs/2001.06462}, eprinttype = {arXiv}, eprint = {2001.06462}, timestamp = {Fri, 24 Jan 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/corr/abs-2001-06462.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/RougnyTMBCBDMDB19, author = {Adrien Rougny and Vasundra Tour{\'{e}} and Stuart L. Moodie and Irina Balaur and Tobias Czauderna and Hanna Borlinghaus and Ugur Dogrusoz and Alexander Mazein and Andreas Dr{\"{a}}ger and Michael L. Blinov and Alice Vill{\'{e}}ger and Robin Haw and Emek Demir and Huaiyu Mi and Anatoly A. Sorokin and Falk Schreiber and Augustin Luna}, title = {Systems Biology Graphical Notation: Process Description language Level 1 Version 2.0}, journal = {J. Integr. Bioinform.}, volume = {16}, number = {2}, year = {2019}, url = {https://doi.org/10.1515/jib-2019-0022}, doi = {10.1515/JIB-2019-0022}, timestamp = {Tue, 14 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jib/RougnyTMBCBDMDB19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/SchreiberSBGGHK19, author = {Falk Schreiber and Bj{\"{o}}rn Sommer and Gary D. Bader and Padraig Gleeson and Martin Golebiewski and Michael Hucka and Sarah M. Keating and Matthias K{\"{o}}nig and Chris J. Myers and David P. Nickerson and Dagmar Waltemath}, title = {Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2019}, journal = {J. Integr. Bioinform.}, volume = {16}, number = {2}, year = {2019}, url = {https://doi.org/10.1515/jib-2019-0035}, doi = {10.1515/JIB-2019-0035}, timestamp = {Wed, 08 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jib/SchreiberSBGGHK19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/GarkovKKS19, author = {Dimitar Garkov and Karsten Klein and Christian Klukas and Falk Schreiber}, title = {Mental-Map Preserving Visualisation of Partitioned Networks in Vanted}, journal = {J. Integr. Bioinform.}, volume = {16}, number = {3}, year = {2019}, url = {https://doi.org/10.1515/jib-2019-0026}, doi = {10.1515/JIB-2019-0026}, timestamp = {Tue, 14 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jib/GarkovKKS19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/FriedrichsSCISS19, author = {Marcel Friedrichs and Alban Shoshi and Piotr Chmura and Jon C. Ison and Veit Schw{\"{a}}mmle and Falk Schreiber and Ralf Hofest{\"{a}}dt and Bj{\"{o}}rn Sommer}, title = {JIB.tools 2.0 - {A} Bioinformatics Registry for Journal Published Tools with Interoperability to bio.tools}, journal = {J. Integr. Bioinform.}, volume = {16}, number = {4}, year = {2019}, url = {https://doi.org/10.1515/jib-2019-0059}, doi = {10.1515/JIB-2019-0059}, timestamp = {Wed, 08 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jib/FriedrichsSCISS19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apvis/Jaeger0JZRKYPRS19, author = {Sabrina Jaeger and Karsten Klein and Lucas Joos and Johannes Zagermann and Michael de Ridder and Jinman Kim and Jean Yee Hwa Yang and Ulrike Pfeil and Harald Reiterer and Falk Schreiber}, title = {Challenges for Brain Data Analysis in {VR} Environments}, booktitle = {{IEEE} Pacific Visualization Symposium, PacificVis 2019, Bangkok, Thailand, April 23-26, 2019}, pages = {42--46}, publisher = {{IEEE}}, year = {2019}, url = {https://doi.org/10.1109/PacificVis.2019.00013}, doi = {10.1109/PACIFICVIS.2019.00013}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apvis/Jaeger0JZRKYPRS19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ei-sda/0001DAMRWZ0KS19, author = {Bj{\"{o}}rn Sommer and Alexandra Diehl and Michael Aichem and Philipp Meschenmoser and Kim Rehberg and David Weber and Ying Zhang and Karsten Klein and Daniel A. Keim and Falk Schreiber}, editor = {Andrew J. Woods and Gregg E. Favalora and Nicolas S. Holliman and Takashi Kawai}, title = {Tiled Stereoscopic 3D Display Wall - Concept, Applications and Evaluation}, booktitle = {Stereoscopic Displays and Applications XXX, Burlingame, CA, USA, January 13-17, 2019}, pages = {1--15}, publisher = {Society for Imaging Science and Technology}, year = {2019}, url = {https://doi.org/10.2352/ISSN.2470-1173.2019.3.SDA-641}, doi = {10.2352/ISSN.2470-1173.2019.3.SDA-641}, timestamp = {Sun, 06 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/ei-sda/0001DAMRWZ0KS19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ervr/SommerFK0WFFFNW19, author = {Bjorn Sommer and Stefan P. Feyer and Daniel Klinkhammer and Karsten Klein and Jonathan Wieland and Daniel Fink and Wolfgang Fiedler and Andrea Flack and M{\'{a}}t{\'{e}} Nagy and Martin Wikelski and Harald Reiterer and Falk Schreiber}, editor = {Margaret Dolinsky and Ian E. McDowall}, title = {BinocularsVR - {A} {VR} experience for the exhibition "From Lake Constance to Africa, a long distance travel with ICARUS"}, booktitle = {The Engineering Reality of Virtual Reality 2019, Burlingame, CA, USA, 13-17 January 2019}, publisher = {Society for Imaging Science and Technology}, year = {2019}, url = {https://doi.org/10.2352/ISSN.2470-1173.2019.2.ERVR-177}, doi = {10.2352/ISSN.2470-1173.2019.2.ERVR-177}, timestamp = {Sun, 12 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/ervr/SommerFK0WFFFNW19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/vinci/0001ASEZS19, author = {Karsten Klein and Michael Aichem and Bj{\"{o}}rn Sommer and Stefan Erk and Ying Zhang and Falk Schreiber}, title = {TEAMwISE: Synchronised Immersive Environments for Exploration and Analysis of Movement Data}, booktitle = {Proceedings of the 12th International Symposium on Visual Information Communication and Interaction, {VINCI} 2019, Shanghai, China, September 20-22, 2019}, pages = {9:1--9:5}, publisher = {{ACM}}, year = {2019}, url = {https://doi.org/10.1145/3356422.3356450}, doi = {10.1145/3356422.3356450}, timestamp = {Wed, 08 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/vinci/0001ASEZS19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/vinci/0001JMWHBS19, author = {Karsten Klein and Sabrina Jaeger and J{\"{o}}rg Melzheimer and Bettina Wachter and Heribert Hofer and Artur Baltabayev and Falk Schreiber}, title = {Visual Analytics for Cheetah Behaviour Analysis}, booktitle = {Proceedings of the 12th International Symposium on Visual Information Communication and Interaction, {VINCI} 2019, Shanghai, China, September 20-22, 2019}, pages = {16:1--16:8}, publisher = {{ACM}}, year = {2019}, url = {https://doi.org/10.1145/3356422.3356435}, doi = {10.1145/3356422.3356435}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/vinci/0001JMWHBS19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@incollection{DBLP:series/lncs/BinucciBDGHKMSSS19, author = {Carla Binucci and Ulrik Brandes and Tim Dwyer and Martin Gronemann and Reinhard von Hanxleden and Marc J. van Kreveld and Petra Mutzel and Marcus Schaefer and Falk Schreiber and Bettina Speckmann}, editor = {Bernhard Steffen and Gerhard J. Woeginger}, title = {10 Reasons to Get Interested in Graph Drawing}, booktitle = {Computing and Software Science - State of the Art and Perspectives}, series = {Lecture Notes in Computer Science}, volume = {10000}, pages = {85--104}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-319-91908-9\_6}, doi = {10.1007/978-3-319-91908-9\_6}, timestamp = {Tue, 12 Sep 2023 07:58:41 +0200}, biburl = {https://dblp.org/rec/series/lncs/BinucciBDGHKMSSS19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/SchreiberBGGHKN18, author = {Falk Schreiber and Gary D. Bader and Padraig Gleeson and Martin Golebiewski and Michael Hucka and Sarah M. Keating and Nicolas Le Nov{\`{e}}re and Chris J. Myers and David P. Nickerson and Bj{\"{o}}rn Sommer and Dagmar Waltemath}, title = {Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2017}, journal = {J. Integr. Bioinform.}, volume = {15}, number = {1}, year = {2018}, url = {https://doi.org/10.1515/jib-2018-0013}, doi = {10.1515/JIB-2018-0013}, timestamp = {Wed, 08 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jib/SchreiberBGGHKN18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/BiereGDJRFHSKS18, author = {Niklas Biere and Mehmood Ghaffar and Anja Doebbe and Daniel J{\"{a}}ger and Nils Rothe and Benjamin M. Friedrich and Ralf Hofest{\"{a}}dt and Falk Schreiber and Olaf Kruse and Bj{\"{o}}rn Sommer}, title = {Heuristic Modeling and 3D Stereoscopic Visualization of a Chlamydomonas reinhardtii Cell}, journal = {J. Integr. Bioinform.}, volume = {15}, number = {2}, year = {2018}, url = {https://doi.org/10.1515/jib-2018-0003}, doi = {10.1515/JIB-2018-0003}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jib/BiereGDJRFHSKS18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/vlc/KlapperstuckCGG18, author = {Matthias Klapperst{\"{u}}ck and Tobias Czauderna and Cagatay Goncu and Jaroslaw Glowacki and Tim Dwyer and Falk Schreiber and Kim Marriott}, title = {ContextuWall: Multi-site collaboration using display walls}, journal = {J. Vis. Lang. Comput.}, volume = {46}, pages = {35--42}, year = {2018}, url = {https://doi.org/10.1016/j.jvlc.2017.10.002}, doi = {10.1016/J.JVLC.2017.10.002}, timestamp = {Sat, 05 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/vlc/KlapperstuckCGG18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ervr/BaltabayevGBBBK18, author = {Artur Baltabayev and Alexej Gluschkow and Johannes Blank and Gero Birkh{\"{o}}lzer and Jean B{\"{u}}sche and Martin Kern and Fabian Klopfer and Lisa{-}Maria Mayer and Gabriel Scheibler and Karsten Klein and Falk Schreiber and Bj{\"{o}}rn Sommer}, editor = {Margaret Dolinsky and Ian E. McDowall}, title = {Virtual Reality for Sensor Data Visualization and Analysis}, booktitle = {The Engineering Reality of Virtual Reality 2018, Burlingame, CA, USA, 28 January - 1 February 2018}, publisher = {Society for Imaging Science and Technology}, year = {2018}, url = {https://doi.org/10.2352/ISSN.2470-1173.2018.03.ERVR-451}, doi = {10.2352/ISSN.2470-1173.2018.03.ERVR-451}, timestamp = {Wed, 19 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/ervr/BaltabayevGBBBK18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/grapp/Schreiber18, author = {Falk Schreiber}, editor = {Dominique Bechmann and Ana Paula Cl{\'{a}}udio and Jos{\'{e}} Braz}, title = {Immersive Analytics - Methodology and Applications in the Life Sciences}, booktitle = {Proceedings of the 13th International Joint Conference on Computer Vision, Imaging and Computer Graphics Theory and Applications {(VISIGRAPP} 2018) - Volume 1: GRAPP, Funchal, Madeira, Portugal, January 27-29, 2018}, pages = {9}, publisher = {SciTePress}, year = {2018}, timestamp = {Thu, 23 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/grapp/Schreiber18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/um/WangBSSR18, author = {Yunlong Wang and Corinna Breitinger and Bj{\"{o}}rn Sommer and Falk Schreiber and Harald Reiterer}, editor = {Tanja Mitrovic and Jie Zhang and Li Chen and David Chin}, title = {Comparing Sequential and Temporal Patterns from Human Mobility Data for Next-Place Prediction}, booktitle = {Adjunct Publication of the 26th Conference on User Modeling, Adaptation and Personalization, {UMAP} 2018, Singapore, July 08-11, 2018}, pages = {157--164}, publisher = {{ACM}}, year = {2018}, url = {https://doi.org/10.1145/3213586.3226212}, doi = {10.1145/3213586.3226212}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/um/WangBSSR18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/vinci/GhaffarBJKSKS18, author = {Mehmood Ghaffar and Niklas Biere and Daniel J{\"{a}}ger and Karsten Klein and Falk Schreiber and Olaf Kruse and Bj{\"{o}}rn Sommer}, editor = {Andreas Kerren and Karsten Klein and Yi{-}Na Li}, title = {3D Modelling and Visualisation of Heterogeneous Cell Membranes in Blender}, booktitle = {Proceedings of the 11th International Symposium on Visual Information Communication and Interaction, {VINCI} 2018, V{\"{a}}xj{\"{o}}, Sweden, August 13-15, 2018}, pages = {64--71}, publisher = {{ACM}}, year = {2018}, url = {https://doi.org/10.1145/3231622.3231639}, doi = {10.1145/3231622.3231639}, timestamp = {Wed, 08 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/vinci/GhaffarBJKSKS18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@incollection{DBLP:series/lncs/DwyerM00RSST18, author = {Tim Dwyer and Kim Marriott and Tobias Isenberg and Karsten Klein and Nathalie Henry Riche and Falk Schreiber and Wolfgang Stuerzlinger and Bruce H. Thomas}, editor = {Kim Marriott and Falk Schreiber and Tim Dwyer and Karsten Klein and Nathalie Henry Riche and Takayuki Itoh and Wolfgang Stuerzlinger and Bruce H. Thomas}, title = {Immersive Analytics: An Introduction}, booktitle = {Immersive Analytics}, series = {Lecture Notes in Computer Science}, volume = {11190}, pages = {1--23}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-030-01388-2\_1}, doi = {10.1007/978-3-030-01388-2\_1}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/series/lncs/DwyerM00RSST18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@incollection{DBLP:series/lncs/CzaudernaHKK0KOSS18, author = {Tobias Czauderna and Jason Haga and Jinman Kim and Matthias Klapperst{\"{u}}ck and Karsten Klein and Torsten W. Kuhlen and Steffen Oeltze{-}Jafra and Bj{\"{o}}rn Sommer and Falk Schreiber}, editor = {Kim Marriott and Falk Schreiber and Tim Dwyer and Karsten Klein and Nathalie Henry Riche and Takayuki Itoh and Wolfgang Stuerzlinger and Bruce H. Thomas}, title = {Immersive Analytics Applications in Life and Health Sciences}, booktitle = {Immersive Analytics}, series = {Lecture Notes in Computer Science}, volume = {11190}, pages = {289--330}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-030-01388-2\_10}, doi = {10.1007/978-3-030-01388-2\_10}, timestamp = {Wed, 08 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/series/lncs/CzaudernaHKK0KOSS18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@book{DBLP:series/lncs/11190, editor = {Kim Marriott and Falk Schreiber and Tim Dwyer and Karsten Klein and Nathalie Henry Riche and Takayuki Itoh and Wolfgang Stuerzlinger and Bruce H. Thomas}, title = {Immersive Analytics}, series = {Lecture Notes in Computer Science}, volume = {11190}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-030-01388-2}, doi = {10.1007/978-3-030-01388-2}, isbn = {978-3-030-01387-5}, timestamp = {Tue, 14 May 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/series/lncs/11190.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1807-00546, author = {Yunlong Wang and Bj{\"{o}}rn Sommer and Falk Schreiber and Harald Reiterer}, title = {Clustering with Temporal Constraints on Spatio-Temporal Data of Human Mobility}, journal = {CoRR}, volume = {abs/1807.00546}, year = {2018}, url = {http://arxiv.org/abs/1807.00546}, eprinttype = {arXiv}, eprint = {1807.00546}, timestamp = {Wed, 08 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/corr/abs-1807-00546.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/it/SommerS17, author = {Bj{\"{o}}rn Sommer and Falk Schreiber}, title = {Integration and virtual reality exploration of biomedical data with CmPI and {VANTED}}, journal = {it Inf. Technol.}, volume = {59}, number = {4}, pages = {181}, year = {2017}, url = {https://doi.org/10.1515/itit-2016-0030}, doi = {10.1515/ITIT-2016-0030}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/it/SommerS17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/HofestadtSSA17, author = {Ralf Hofest{\"{a}}dt and Falk Schreiber and Bj{\"{o}}rn Sommer and Jens Allmer}, title = {Computational miRNomics - Integrative Approaches}, journal = {J. Integr. Bioinform.}, volume = {14}, number = {1}, year = {2017}, url = {https://doi.org/10.1515/jib-2017-0012}, doi = {10.1515/JIB-2017-0012}, timestamp = {Wed, 08 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jib/HofestadtSSA17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ei-sda/0001BBCCCK0NNSV17, author = {Bj{\"{o}}rn Sommer and David G. Barnes and Sarah E. Boyd and Tom Chandler and Maxime Cordeil and Tobias Czauderna and Matthias Klapperst{\"{u}}ck and Karsten Klein and To{\`{a}}n D. Nguy{\^{e}}n and Hieu T. Nim and Kingsley Stephens and Dany Vohl and Stephen Jia Wang and Elliott Wilson and Yan Zhu and Jian Li and Jon McCormack and Kim Marriott and Falk Schreiber}, editor = {Andrew J. Woods and Gregg E. Favalora and Nicolas S. Holliman and Takashi Kawai}, title = {3D-Stereoscopic Immersive Analytics Projects at Monash University and University of Konstanz}, booktitle = {Stereoscopic Displays and Applications XXVIII, Burlingame, CA, USA, January 29 - February 2, 2017}, pages = {179--187}, publisher = {Society for Imaging Science and Technology}, year = {2017}, url = {https://doi.org/10.2352/ISSN.2470-1173.2017.5.SDA-109}, doi = {10.2352/ISSN.2470-1173.2017.5.SDA-109}, timestamp = {Sun, 06 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/ei-sda/0001BBCCCK0NNSV17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gi/Schreiber17, author = {Falk Schreiber}, editor = {Maximilian Eibl and Martin Gaedke}, title = {Analyse und Aufzeigen von Zusammenh{\"{a}}ngen}, booktitle = {47. Jahrestagung der Gesellschaft f{\"{u}}r Informatik, Digitale Kulturen, {INFORMATIK} 2017, Chemnitz, Germany, September 25-29, 2017}, series = {{LNI}}, volume = {{P-275}}, pages = {597}, publisher = {{GI}}, year = {2017}, url = {https://doi.org/10.18420/in2017\_55}, doi = {10.18420/IN2017\_55}, timestamp = {Wed, 13 Jan 2021 11:37:14 +0100}, biburl = {https://dblp.org/rec/conf/gi/Schreiber17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/vcbm/NimSKFSNFWS17, author = {Hieu T. Nim and Bj{\"{o}}rn Sommer and Karsten Klein and Andrea Flack and Kamran Safi and M{\'{a}}t{\'{e}} Nagy and Wolfgang Fiedler and Martin Wikelski and Falk Schreiber}, title = {Design Considerations for Immersive Analytics of Bird Movements Obtained by Miniaturised {GPS} Sensors}, booktitle = {{VCBM} 17: Eurographics Workshop on Visual Computing for Biology and Medicine, Bremen, Germany, September 7-8, 2017}, pages = {27--31}, publisher = {Eurographics Association}, year = {2017}, url = {https://doi.org/10.2312/vcbm.20171234}, doi = {10.2312/VCBM.20171234}, timestamp = {Wed, 08 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/vcbm/NimSKFSNFWS17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/vissym/KerrenKLS17, author = {Andreas Kerren and Kostiantyn Kucher and Yuan{-}Fang Li and Falk Schreiber}, editor = {Anna Puig and Tobias Isenberg}, title = {MDS-based Visual Survey of Biological Data Visualization Techniques}, booktitle = {19th Eurographics Conference on Visualization, EuroVis 2017 - Posters, Barcelona, Spain, June 12-16, 2017}, pages = {85--87}, publisher = {Eurographics Association}, year = {2017}, url = {https://doi.org/10.2312/eurp.20171175}, doi = {10.2312/EURP.20171175}, timestamp = {Wed, 01 Jul 2020 13:35:20 +0200}, biburl = {https://dblp.org/rec/conf/vissym/KerrenKLS17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wsc/MyersBGGHNNSW17, author = {Chris J. Myers and Gary D. Bader and Padraig Gleeson and Martin Golebiewski and Michael Hucka and Nicolas Le Nov{\`{e}}re and David P. Nickerson and Falk Schreiber and Dagmar Waltemath}, title = {A brief history of {COMBINE}}, booktitle = {2017 Winter Simulation Conference, {WSC} 2017, Las Vegas, NV, USA, December 3-6, 2017}, pages = {884--895}, publisher = {{IEEE}}, year = {2017}, url = {https://doi.org/10.1109/WSC.2017.8247840}, doi = {10.1109/WSC.2017.8247840}, timestamp = {Wed, 16 Oct 2019 14:14:56 +0200}, biburl = {https://dblp.org/rec/conf/wsc/MyersBGGHNNSW17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/SchreiberBGGHNM16, author = {Falk Schreiber and Gary D. Bader and Padraig Gleeson and Martin Golebiewski and Michael Hucka and Nicolas Le Nov{\`{e}}re and Chris J. Myers and David P. Nickerson and Bj{\"{o}}rn Sommer and Dagmar Waltemath}, title = {Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2016}, journal = {J. Integr. Bioinform.}, volume = {13}, number = {3}, year = {2016}, url = {https://doi.org/10.2390/biecoll-jib-2016-289}, doi = {10.2390/BIECOLL-JIB-2016-289}, timestamp = {Wed, 08 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jib/SchreiberBGGHNM16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tbe/WaltemathKBCHKL16, author = {Dagmar Waltemath and Jonathan R. Karr and Frank T. Bergmann and Vijayalakshmi Chelliah and Michael Hucka and Marcus Krantz and Wolfram Liebermeister and Pedro Mendes and Chris J. Myers and Pinar Pir and Begum Alaybeyoglu and Naveen K. Aranganathan and Kambiz Baghalian and Arne T. Bittig and Paulo E. Pinto Burke and Matteo Cantarelli and Yin Hoon Chew and Rafael S. Costa and Joseph Cursons and Tobias Czauderna and Arthur P. Goldberg and Harold F. G{\'{o}}mez and Jens Hahn and Tuure Hameri and Daniel F. Hernandez Gardiol and Denis Kazakiewicz and Ilya Kiselev and Vincent Knight{-}Schrijver and Christian Kn{\"{u}}pfer and Matthias K{\"{o}}nig and Daewon Lee and Audald Lloret{-}Villas and Nikita Mandrik and J. Kyle Medley and Bertrand Moreau and Hojjat Naderi{-}Meshkin and Sucheendra K. Palaniappan and Daniel Priego{-}Espinosa and Martin Scharm and Mahesh Sharma and Kieran Smallbone and Natalie J. Stanford and Je{-}Hoon Song and Tom Theile and Milenko Tokic and Namrata Tomar and Vasundra Tour{\'{e}} and Jannis Uhlendorf and Thawfeek M. Varusai and Leandro H. Watanabe and Florian Wendland and Markus Wolfien and James T. Yurkovich and Yan Zhu and Argyris Zardilis and Anna Zhukova and Falk Schreiber}, title = {Toward Community Standards and Software for Whole-Cell Modeling}, journal = {{IEEE} Trans. Biomed. Eng.}, volume = {63}, number = {10}, pages = {2007--2014}, year = {2016}, url = {https://doi.org/10.1109/TBME.2016.2560762}, doi = {10.1109/TBME.2016.2560762}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/tbe/WaltemathKBCHKL16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bdva/KlapperstuckCGG16, author = {Matthias Klapperst{\"{u}}ck and Tobias Czauderna and Cagatay Goncu and Jaroslaw Glowacki and Tim Dwyer and Falk Schreiber and Kim Marriott}, title = {ContextuWall: Peer Collaboration Using (Large) Displays}, booktitle = {2016 Big Data Visual Analytics, {BDVA} 2016, Sydney, Australia, November 22-25, 2016}, pages = {1--8}, publisher = {{IEEE}}, year = {2016}, url = {https://doi.org/10.1109/BDVA.2016.7787047}, doi = {10.1109/BDVA.2016.7787047}, timestamp = {Sat, 05 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/bdva/KlapperstuckCGG16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bdva/NimWZSSBW16, author = {Hieu T. Nim and Mengyang Wang and Yujie Zhu and Bj{\"{o}}rn Sommer and Falk Schreiber and Sarah E. Boyd and Stephen Jia Wang}, title = {Communicating the Effect of Human Behaviour on the Great Barrier Reef via Mixed Reality Visualisation}, booktitle = {2016 Big Data Visual Analytics, {BDVA} 2016, Sydney, Australia, November 22-25, 2016}, pages = {1--6}, publisher = {{IEEE}}, year = {2016}, url = {https://doi.org/10.1109/BDVA.2016.7787046}, doi = {10.1109/BDVA.2016.7787046}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/bdva/NimWZSSBW16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ei-sda/0001HKCKBCTBS16, author = {Bj{\"{o}}rn Sommer and Andreas Hamacher and Owen Kaluza and Tobias Czauderna and Matthias Klapperst{\"{u}}ck and Niklas Biere and Marco Civico and Bruce H. Thomas and David G. Barnes and Falk Schreiber}, editor = {Andrew J. Woods and Nicolas S. Holliman and Gregg E. Favalora and Takashi Kawai}, title = {Stereoscopic Space Map - Semi-immersive Configuration of 3D-stereoscopic Tours in Multi-display Environments}, booktitle = {Stereoscopic Displays and Applications XXVII, San Francisco, CA, USA, February 14-18, 2016}, pages = {1--9}, publisher = {Society for Imaging Science and Technology}, year = {2016}, url = {https://doi.org/10.2352/ISSN.2470-1173.2016.5.SDA-429}, doi = {10.2352/ISSN.2470-1173.2016.5.SDA-429}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/ei-sda/0001HKCKBCTBS16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@incollection{DBLP:series/cb/KochS16, author = {Ina Koch and Falk Schreiber}, editor = {Ina Koch and Wolfgang Reisig and Falk Schreiber}, title = {Introduction}, booktitle = {Modeling in Systems Biology, The Petri Net Approach}, series = {Computational Biology}, volume = {16}, pages = {3--18}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-1-84996-474-6\_1}, doi = {10.1007/978-1-84996-474-6\_1}, timestamp = {Mon, 05 Feb 2024 20:35:58 +0100}, biburl = {https://dblp.org/rec/series/cb/KochS16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/shonan-reports/ItohMSW16, author = {Takayuki Itoh and Kim Marriott and Falk Schreiber and Uwe W{\"{o}}ssner}, title = {Immersive Analytics: {A} new multidisciplinary initiative to explore future interaction technologies for data analytics {(NII} Shonan Meeting 2016-2)}, journal = {{NII} Shonan Meet. Rep.}, volume = {2016}, year = {2016}, url = {https://shonan.nii.ac.jp/seminars/074/}, timestamp = {Thu, 04 Mar 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/shonan-reports/ItohMSW16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/BakerPSJ15, author = {Syed Murtuza Baker and C. Hart Poskar and Falk Schreiber and Bj{\"{o}}rn H. Junker}, title = {A unified framework for estimating parameters of kinetic biological models}, journal = {{BMC} Bioinform.}, volume = {16}, pages = {104:1--104:21}, year = {2015}, url = {https://doi.org/10.1186/s12859-015-0500-9}, doi = {10.1186/S12859-015-0500-9}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/BakerPSJ15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/MiSMCDHLNSV15, author = {Huaiyu Mi and Falk Schreiber and Stuart L. Moodie and Tobias Czauderna and Emek Demir and Robin Haw and Augustin Luna and Nicolas Le Nov{\`{e}}re and Anatoly A. Sorokin and Alice Vill{\'{e}}ger}, title = {Systems Biology Graphical Notation: Activity Flow language Level 1 Version 1.2}, journal = {J. Integr. Bioinform.}, volume = {12}, number = {2}, year = {2015}, url = {https://doi.org/10.2390/biecoll-jib-2015-265}, doi = {10.2390/BIECOLL-JIB-2015-265}, timestamp = {Sun, 25 Jul 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jib/MiSMCDHLNSV15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/SchreiberBGHKNM15, author = {Falk Schreiber and Gary D. Bader and Martin Golebiewski and Michael Hucka and Benjamin Kormeier and Nicolas Le Nov{\`{e}}re and Chris J. Myers and David P. Nickerson and Bj{\"{o}}rn Sommer and Dagmar Waltemath and Stephan Weise}, title = {Specifications of Standards in Systems and Synthetic Biology}, journal = {J. Integr. Bioinform.}, volume = {12}, number = {2}, year = {2015}, url = {https://doi.org/10.2390/biecoll-jib-2015-258}, doi = {10.2390/BIECOLL-JIB-2015-258}, timestamp = {Wed, 08 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jib/SchreiberBGHKNM15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/SorokinNLCDHMMS15, author = {Anatoly A. Sorokin and Nicolas Le Nov{\`{e}}re and Augustin Luna and Tobias Czauderna and Emek Demir and Robin Haw and Huaiyu Mi and Stuart L. Moodie and Falk Schreiber and Alice Vill{\'{e}}ger}, title = {Systems Biology Graphical Notation: Entity Relationship language Level 1 Version 2}, journal = {J. Integr. Bioinform.}, volume = {12}, number = {2}, year = {2015}, url = {https://doi.org/10.2390/biecoll-jib-2015-264}, doi = {10.2390/BIECOLL-JIB-2015-264}, timestamp = {Sun, 25 Jul 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jib/SorokinNLCDHMMS15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bdva/SommerWXCS15, author = {Bj{\"{o}}rn Sommer and Stephen Jia Wang and Lifeng Xu and Ming Chen and Falk Schreiber}, title = {Hybrid-Dimensional Visualization and Interaction - Integrating 2D and 3D Visualization with Semi-Immersive Navigation Techniques}, booktitle = {Big Data Visual Analytics, {BDVA} 2015, Hobart, Australia, September 22-25, 2015}, pages = {65--72}, publisher = {{IEEE}}, year = {2015}, url = {https://doi.org/10.1109/BDVA.2015.7314295}, doi = {10.1109/BDVA.2015.7314295}, timestamp = {Wed, 08 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bdva/SommerWXCS15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bdva/ChandlerCCDGGKK15, author = {Tom Chandler and Maxime Cordeil and Tobias Czauderna and Tim Dwyer and Jaroslaw Glowacki and Cagatay Goncu and Matthias Klapperst{\"{u}}ck and Karsten Klein and Kim Marriott and Falk Schreiber and Elliott Wilson}, title = {Immersive Analytics}, booktitle = {Big Data Visual Analytics, {BDVA} 2015, Hobart, Australia, September 22-25, 2015}, pages = {73--80}, publisher = {{IEEE}}, year = {2015}, url = {https://doi.org/10.1109/BDVA.2015.7314296}, doi = {10.1109/BDVA.2015.7314296}, timestamp = {Wed, 26 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/bdva/ChandlerCCDGGKK15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bdva/NimDSB15, author = {Hieu T. Nim and Terence Done and Falk Schreiber and Sarah E. Boyd}, title = {Interactive Geolocational and Coral Compositional Visualisation of Great Barrier Reef Heat Stress Data}, booktitle = {Big Data Visual Analytics, {BDVA} 2015, Hobart, Australia, September 22-25, 2015}, pages = {81--87}, publisher = {{IEEE}}, year = {2015}, url = {https://doi.org/10.1109/BDVA.2015.7314297}, doi = {10.1109/BDVA.2015.7314297}, timestamp = {Sun, 02 Jun 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/bdva/NimDSB15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/cga/KerrenS14, author = {Andreas Kerren and Falk Schreiber}, title = {Why Integrate InfoVis and SciVis?: An Example from Systems Biology}, journal = {{IEEE} Computer Graphics and Applications}, volume = {34}, number = {6}, pages = {69--73}, year = {2014}, url = {https://doi.org/10.1109/MCG.2014.122}, doi = {10.1109/MCG.2014.122}, timestamp = {Wed, 14 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/cga/KerrenS14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/it/KochRS14, author = {Ina Koch and Wolfgang Reisig and Falk Schreiber}, title = {Petri Nets in the Biosciences}, journal = {it Inf. Technol.}, volume = {56}, number = {2}, pages = {43--45}, year = {2014}, url = {https://doi.org/10.1515/itit-2014-1042}, doi = {10.1515/ITIT-2014-1042}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/it/KochRS14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/KlapperstuckS14, author = {Matthias Klapperst{\"{u}}ck and Falk Schreiber}, title = {BioNetLink - An Architecture for Working with Network Data}, journal = {J. Integr. Bioinform.}, volume = {11}, number = {2}, year = {2014}, url = {https://doi.org/10.2390/biecoll-jib-2014-241}, doi = {10.2390/BIECOLL-JIB-2014-241}, timestamp = {Tue, 14 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jib/KlapperstuckS14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@incollection{DBLP:books/sp/14/KerrenS14, author = {Andreas Kerren and Falk Schreiber}, editor = {Ming Chen and Ralf Hofest{\"{a}}dt}, title = {Network Visualization for Integrative Bioinformatics}, booktitle = {Approaches in Integrative Bioinformatics - Towards the Virtual Cell}, pages = {173--202}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-642-41281-3\_7}, doi = {10.1007/978-3-642-41281-3\_7}, timestamp = {Sun, 25 Oct 2020 22:32:13 +0100}, biburl = {https://dblp.org/rec/books/sp/14/KerrenS14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/BakerPSJ13, author = {Syed Murtuza Baker and C. Hart Poskar and Falk Schreiber and Bj{\"{o}}rn H. Junker}, title = {An improved constraint filtering technique for inferring hidden states and parameters of a biological model}, journal = {Bioinform.}, volume = {29}, number = {8}, pages = {1052--1059}, year = {2013}, url = {https://doi.org/10.1093/bioinformatics/btt097}, doi = {10.1093/BIOINFORMATICS/BTT097}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/BakerPSJ13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/CzaudernaWMS13, author = {Tobias Czauderna and Michael Wybrow and Kim Marriott and Falk Schreiber}, title = {Conversion of {KEGG} metabolic pathways to {SBGN} maps including automatic layout}, journal = {{BMC} Bioinform.}, volume = {14}, pages = {250}, year = {2013}, url = {https://doi.org/10.1186/1471-2105-14-250}, doi = {10.1186/1471-2105-14-250}, timestamp = {Sat, 05 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/CzaudernaWMS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/VogtCS13, author = {Torsten Vogt and Tobias Czauderna and Falk Schreiber}, title = {Translation of {SBGN} maps: Process Description to Activity Flow}, journal = {{BMC} Syst. Biol.}, volume = {7}, pages = {115}, year = {2013}, url = {https://doi.org/10.1186/1752-0509-7-115}, doi = {10.1186/1752-0509-7-115}, timestamp = {Sat, 05 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/VogtCS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/BuchelRSWCKMSGGIKRWHHK0MZCSSLDN13, author = {Finja B{\"{u}}chel and Nicolas Rodriguez and Neil Swainston and Clemens Wrzodek and Tobias Czauderna and Roland Keller and Florian Mittag and Michael Schubert and Mihai Glont and Martin Golebiewski and Martijn P. van Iersel and Sarah M. Keating and Matthias Rall and Michael Wybrow and Henning Hermjakob and Michael Hucka and Douglas B. Kell and Wolfgang M{\"{u}}ller and Pedro Mendes and Andreas Zell and Claudine Chaouiya and Julio Saez{-}Rodriguez and Falk Schreiber and Camille Laibe and Andreas Dr{\"{a}}ger and Nicolas Le Nov{\`{e}}re}, title = {Path2Models: large-scale generation of computational models from biochemical pathway maps}, journal = {{BMC} Syst. Biol.}, volume = {7}, pages = {116}, year = {2013}, url = {https://doi.org/10.1186/1752-0509-7-116}, doi = {10.1186/1752-0509-7-116}, timestamp = {Thu, 03 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/BuchelRSWCKMSGGIKRWHHK0MZCSSLDN13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ivs/JusufiKS13, author = {Ilir Jusufi and Andreas Kerren and Falk Schreiber}, title = {Exploring biological data: Mappings between ontology- and cluster-based representations}, journal = {Inf. Vis.}, volume = {12}, number = {3-4}, pages = {291--307}, year = {2013}, url = {https://doi.org/10.1177/1473871612468880}, doi = {10.1177/1473871612468880}, timestamp = {Thu, 24 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ivs/JusufiKS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/HofestadtKLSSW13, author = {Ralf Hofest{\"{a}}dt and Benjamin Kormeier and Matthias Lange and Falk Schreiber and Bj{\"{o}}rn Sommer and Stephan Weise}, title = {Editorial}, journal = {J. Integr. Bioinform.}, volume = {10}, number = {1}, year = {2013}, url = {https://doi.org/10.2390/biecoll-jib-2013-226}, doi = {10.2390/BIECOLL-JIB-2013-226}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jib/HofestadtKLSSW13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/dagstuhl/KohlbacherSW13, author = {Oliver Kohlbacher and Falk Schreiber and Matthew O. Ward}, editor = {Andreas Kerren and Helen C. Purchase and Matthew O. Ward}, title = {Multivariate Networks in the Life Sciences}, booktitle = {Multivariate Network Visualization - Dagstuhl Seminar {\#}13201, Dagstuhl Castle, Germany, May 12-17, 2013, Revised Discussions}, series = {Lecture Notes in Computer Science}, volume = {8380}, pages = {61--73}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-319-06793-3\_4}, doi = {10.1007/978-3-319-06793-3\_4}, timestamp = {Tue, 21 Mar 2023 21:00:28 +0100}, biburl = {https://dblp.org/rec/conf/dagstuhl/KohlbacherSW13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/dagstuhl/SchreiberKBHZ13, author = {Falk Schreiber and Andreas Kerren and Katy B{\"{o}}rner and Hans Hagen and Dirk Zeckzer}, editor = {Andreas Kerren and Helen C. Purchase and Matthew O. Ward}, title = {Heterogeneous Networks on Multiple Levels}, booktitle = {Multivariate Network Visualization - Dagstuhl Seminar {\#}13201, Dagstuhl Castle, Germany, May 12-17, 2013, Revised Discussions}, series = {Lecture Notes in Computer Science}, volume = {8380}, pages = {175--206}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-319-06793-3\_9}, doi = {10.1007/978-3-319-06793-3\_9}, timestamp = {Fri, 19 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/dagstuhl/SchreiberKBHZ13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gi/ColmseeCGHLMWSS13, author = {Christian Colmsee and Tobias Czauderna and Eva Grafahrend{-}Belau and Anja Hartmann and Matthias Lange and Martin Mascher and Stephan Weise and Uwe Scholz and Falk Schreiber}, editor = {Matthias Horbach}, title = {OPTIMAS-DW, MetaCrop and {VANTED:} {A} Case Study for Data Integration, Curation and Visualisation in Life Sciences}, booktitle = {43. Jahrestagung der Gesellschaft f{\"{u}}r Informatik, Informatik angepasst an Mensch, Organisation und Umwelt, {INFORMATIK} 2013, Koblenz, Germany, September 16-20, 2013}, series = {{LNI}}, volume = {{P-220}}, pages = {1834--1840}, publisher = {{GI}}, year = {2013}, url = {https://dl.gi.de/handle/20.500.12116/20615}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gi/ColmseeCGHLMWSS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@incollection{DBLP:reference/crc/BachmaierBS13, author = {Christian Bachmaier and Ulrik Brandes and Falk Schreiber}, editor = {Roberto Tamassia}, title = {Biological Networks}, booktitle = {Handbook on Graph Drawing and Visualization}, pages = {621--651}, publisher = {Chapman and Hall/CRC}, year = {2013}, timestamp = {Wed, 12 Jul 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/reference/crc/BachmaierBS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/GrasslerKS12, author = {Johannes Gr{\"{a}}{\ss}ler and Dirk Kosch{\"{u}}tzki and Falk Schreiber}, title = {CentiLib: comprehensive analysis and exploration of network centralities}, journal = {Bioinform.}, volume = {28}, number = {8}, pages = {1178--1179}, year = {2012}, url = {https://doi.org/10.1093/bioinformatics/bts106}, doi = {10.1093/BIOINFORMATICS/BTS106}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/GrasslerKS12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/IerselVCBBLDSDMFAMMKNS12, author = {Martijn P. van Iersel and Alice Vill{\'{e}}ger and Tobias Czauderna and Sarah E. Boyd and Frank T. Bergmann and Augustin Luna and Emek Demir and Anatoly A. Sorokin and Ugur Dogrus{\"{o}}z and Yukiko Matsuoka and Akira Funahashi and Mirit I. Aladjem and Huaiyu Mi and Stuart L. Moodie and Hiroaki Kitano and Nicolas Le Nov{\`{e}}re and Falk Schreiber}, title = {Software support for {SBGN} maps: {SBGN-ML} and LibSBGN}, journal = {Bioinform.}, volume = {28}, number = {15}, pages = {2016--2021}, year = {2012}, url = {https://doi.org/10.1093/bioinformatics/bts270}, doi = {10.1093/BIOINFORMATICS/BTS270}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/IerselVCBBLDSDMFAMMKNS12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/RohnHJJS12, author = {Hendrik Rohn and Anja Hartmann and Astrid Junker and Bj{\"{o}}rn H. Junker and Falk Schreiber}, title = {FluxMap: {A} {VANTED} add-on for the visual exploration of flux distributions in biological networks}, journal = {{BMC} Syst. Biol.}, volume = {6}, pages = {33}, year = {2012}, url = {https://doi.org/10.1186/1752-0509-6-33}, doi = {10.1186/1752-0509-6-33}, timestamp = {Tue, 05 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/RohnHJJS12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcsb/RohnJHGTKCKS12, author = {Hendrik Rohn and Astrid Junker and Anja Hartmann and Eva Grafahrend{-}Belau and Hendrik Treutler and Matthias Klapperst{\"{u}}ck and Tobias Czauderna and Christian Klukas and Falk Schreiber}, title = {{VANTED} v2: a framework for systems biology applications}, journal = {{BMC} Syst. Biol.}, volume = {6}, pages = {139}, year = {2012}, url = {https://doi.org/10.1186/1752-0509-6-139}, doi = {10.1186/1752-0509-6-139}, timestamp = {Sun, 25 Jul 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcsb/RohnJHGTKCKS12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ivs/JusufiKKS12, author = {Ilir Jusufi and Christian Klukas and Andreas Kerren and Falk Schreiber}, title = {Guiding the interactive exploration of metabolic pathway interconnections}, journal = {Inf. Vis.}, volume = {11}, number = {2}, pages = {136--150}, year = {2012}, url = {https://doi.org/10.1177/1473871611405677}, doi = {10.1177/1473871611405677}, timestamp = {Thu, 24 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ivs/JusufiKKS12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/LotzSW12, author = {Katrin Lotz and Falk Schreiber and R{\"{o}}bbe W{\"{u}}nschiers}, title = {Nutrilyzer: {A} Tool for Deciphering Atomic Stoichiometry of Differentially Expressed Paralogous Proteins}, journal = {J. Integr. Bioinform.}, volume = {9}, number = {2}, year = {2012}, url = {https://doi.org/10.2390/biecoll-jib-2012-196}, doi = {10.2390/BIECOLL-JIB-2012-196}, timestamp = {Tue, 14 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jib/LotzSW12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/MehlhornLSS12, author = {Hendrik Mehlhorn and Matthias Lange and Uwe Scholz and Falk Schreiber}, title = {IDPredictor: predict database links in biomedical database}, journal = {J. Integr. Bioinform.}, volume = {9}, number = {2}, year = {2012}, url = {https://doi.org/10.2390/biecoll-jib-2012-190}, doi = {10.2390/BIECOLL-JIB-2012-190}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jib/MehlhornLSS12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SchreiberCCGHJJKSW12, author = {Falk Schreiber and Christian Colmsee and Tobias Czauderna and Eva Grafahrend{-}Belau and Anja Hartmann and Astrid Junker and Bj{\"{o}}rn H. Junker and Matthias Klapperst{\"{u}}ck and Uwe Scholz and Stephan Weise}, title = {MetaCrop 2.0: managing and exploring information about crop plant metabolism}, journal = {Nucleic Acids Res.}, volume = {40}, number = {Database-Issue}, pages = {1173--1177}, year = {2012}, url = {https://doi.org/10.1093/nar/gkr1004}, doi = {10.1093/NAR/GKR1004}, timestamp = {Sat, 05 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SchreiberCCGHJJKSW12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/vda/JusufiKAS12, author = {Ilir Jusufi and Andreas Kerren and Vladyslav Aleksakhin and Falk Schreiber}, editor = {Pak Chung Wong and David L. Kao and Ming C. Hao and Chaomei Chen and Robert Kosara and Mark A. Livingston and Jinah Park and Ian Roberts}, title = {Visualization of mappings between the gene ontology and cluster trees}, booktitle = {Visualization and Data Analysis 2012, Burlingame, CA, USA, January 23-25, 2012}, series = {{SPIE} Proceedings}, volume = {8294}, pages = {82940N}, publisher = {{SPIE}}, year = {2012}, url = {https://doi.org/10.1117/12.906700}, doi = {10.1117/12.906700}, timestamp = {Mon, 05 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/vda/JusufiKAS12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wsc/KerrenS12, author = {Andreas Kerren and Falk Schreiber}, editor = {Oliver Rose and Adelinde M. Uhrmacher}, title = {Toward the role of interaction in visual analytics}, booktitle = {Winter Simulation Conference, {WSC} '12, Berlin, Germany, December 9-12, 2012}, pages = {420:1--420:13}, publisher = {{WSC}}, year = {2012}, url = {https://doi.org/10.1109/WSC.2012.6465208}, doi = {10.1109/WSC.2012.6465208}, timestamp = {Thu, 10 Jun 2021 22:19:08 +0200}, biburl = {https://dblp.org/rec/conf/wsc/KerrenS12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/RohnKS11, author = {Hendrik Rohn and Christian Klukas and Falk Schreiber}, title = {Creating views on integrated multidomain data}, journal = {Bioinform.}, volume = {27}, number = {13}, pages = {1839--1845}, year = {2011}, url = {https://doi.org/10.1093/bioinformatics/btr282}, doi = {10.1093/BIOINFORMATICS/BTR282}, timestamp = {Tue, 08 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/RohnKS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/HartmannCHSS11, author = {Anja Hartmann and Tobias Czauderna and Roberto Hoffmann and Nils Stein and Falk Schreiber}, title = {HTPheno: An Image Analysis Pipeline for High-Throughput Plant Phenotyping}, journal = {{BMC} Bioinform.}, volume = {12}, pages = {148}, year = {2011}, url = {https://doi.org/10.1186/1471-2105-12-148}, doi = {10.1186/1471-2105-12-148}, timestamp = {Sat, 05 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/HartmannCHSS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/it/WeiseCJKLSS11, author = {Stephan Weise and Jinbo Chen and Bj{\"{o}}rn H. Junker and Matthias Klapperst{\"{u}}ck and Matthias Lange and Falk Schreiber and Uwe Scholz}, title = {Das Informationssystem MetaCrop zur Unterst{\"{u}}tzung systembiologischer Forschung an Kulturpflanzen}, journal = {it Inf. Technol.}, volume = {53}, number = {5}, pages = {234--240}, year = {2011}, url = {https://doi.org/10.1524/itit.2011.0648}, doi = {10.1524/ITIT.2011.0648}, timestamp = {Fri, 06 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/it/WeiseCJKLSS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/MehlhornS11, author = {Hendrik Mehlhorn and Falk Schreiber}, title = {{DBE2} - Management of experimental data for the {VANTED} system}, journal = {J. Integr. Bioinform.}, volume = {8}, number = {2}, year = {2011}, url = {https://doi.org/10.2390/biecoll-jib-2011-162}, doi = {10.2390/BIECOLL-JIB-2011-162}, timestamp = {Tue, 14 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jib/MehlhornS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gi/MehlhornS11, author = {Hendrik Mehlhorn and Falk Schreiber}, editor = {Hans{-}Ulrich Hei{\ss} and Peter Pepper and Holger Schlingloff and J{\"{o}}rg Schneider}, title = {Integration and exploration of biological networks}, booktitle = {41. Jahrestagung der Gesellschaft f{\"{u}}r Informatik, Informatik schafft Communities, {INFORMATIK} 2011, Berlin, Germany, October 4-7, 2011, Abstract Proceedings}, series = {{LNI}}, volume = {{P-192}}, pages = {160}, publisher = {{GI}}, year = {2011}, url = {https://dl.gi.de/handle/20.500.12116/18873}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gi/MehlhornS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/imagapp/RohnKS11, author = {Hendrik Rohn and Christian Klukas and Falk Schreiber}, editor = {Gabriela Csurka and Martin Kraus and Jos{\'{e}} Braz}, title = {Visual Analytics of Multimodal Biological Data}, booktitle = {{IMAGAPP} {\&} {IVAPP} 2011 - Proceedings of the International Conference on Imaging Theory and Applications and International Conference on Information Visualization Theory and Applications, Vilamoura, Algarve, Portugal, March 5-7, 2011}, pages = {256--261}, publisher = {SciTePress}, year = {2011}, timestamp = {Tue, 30 Jul 2024 10:15:00 +0200}, biburl = {https://dblp.org/rec/conf/imagapp/RohnKS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@book{DBLP:series/cb/16, editor = {Ina Koch and Wolfgang Reisig and Falk Schreiber}, title = {Modeling in Systems Biology, The Petri Net Approach}, series = {Computational Biology}, volume = {16}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-1-84996-474-6}, doi = {10.1007/978-1-84996-474-6}, isbn = {978-1-84996-473-9}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/series/cb/16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/CzaudernaKS10, author = {Tobias Czauderna and Christian Klukas and Falk Schreiber}, title = {Editing, validating and translating of {SBGN} maps}, journal = {Bioinform.}, volume = {26}, number = {18}, pages = {2340--2341}, year = {2010}, url = {https://doi.org/10.1093/bioinformatics/btq407}, doi = {10.1093/BIOINFORMATICS/BTQ407}, timestamp = {Sat, 05 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/CzaudernaKS10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/ScharfePS10, author = {Michael Scharfe and Rainer Pielot and Falk Schreiber}, title = {Fast multi-core based multimodal registration of 2D cross-sections and 3D datasets}, journal = {{BMC} Bioinform.}, volume = {11}, pages = {20}, year = {2010}, url = {https://doi.org/10.1186/1471-2105-11-20}, doi = {10.1186/1471-2105-11-20}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/ScharfePS10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/KlukasS10, author = {Christian Klukas and Falk Schreiber}, title = {Integration of -omics data and networks for biomedical research with {VANTED}}, journal = {J. Integr. Bioinform.}, volume = {7}, number = {2}, year = {2010}, url = {https://doi.org/10.2390/biecoll-jib-2010-112}, doi = {10.2390/BIECOLL-JIB-2010-112}, timestamp = {Tue, 14 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jib/KlukasS10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/HippeCCGJKSSW10, author = {Klaus Hippe and Christian Colmsee and Tobias Czauderna and Eva Grafahrend{-}Belau and Bj{\"{o}}rn H. Junker and Christian Klukas and Uwe Scholz and Falk Schreiber and Stephan Weise}, title = {Novel Developments of the MetaCrop Information System for Facilitating Systems Biological Approaches}, journal = {J. Integr. Bioinform.}, volume = {7}, number = {3}, year = {2010}, url = {https://doi.org/10.2390/biecoll-jib-2010-125}, doi = {10.2390/BIECOLL-JIB-2010-125}, timestamp = {Tue, 14 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jib/HippeCCGJKSSW10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/Grafahrend-BelauKJS09, author = {Eva Grafahrend{-}Belau and Christian Klukas and Bj{\"{o}}rn H. Junker and Falk Schreiber}, title = {FBA-SimVis: interactive visualization of constraint-based metabolic models}, journal = {Bioinform.}, volume = {25}, number = {20}, pages = {2755--2757}, year = {2009}, url = {https://doi.org/10.1093/bioinformatics/btp408}, doi = {10.1093/BIOINFORMATICS/BTP408}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/Grafahrend-BelauKJS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/KashaniAENAAMSM09, author = {Zahra Razaghi Moghadam Kashani and Hayedeh Ahrabian and Elahe Elahi and Abbas Nowzari{-}Dalini and Elnaz Saberi Ansari and Sahar Asadi and Shahin Mohammadi and Falk Schreiber and Ali Masoudi{-}Nejad}, title = {Kavosh: a new algorithm for finding network motifs}, journal = {{BMC} Bioinform.}, volume = {10}, pages = {318}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-318}, doi = {10.1186/1471-2105-10-318}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/KashaniAENAAMSM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/SchreiberDMW09, author = {Falk Schreiber and Tim Dwyer and Kim Marriott and Michael Wybrow}, title = {A generic algorithm for layout of biological networks}, journal = {{BMC} Bioinform.}, volume = {10}, pages = {375}, year = {2009}, url = {https://doi.org/10.1186/1471-2105-10-375}, doi = {10.1186/1471-2105-10-375}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/SchreiberDMW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/insk/Schreiber09, author = {Falk Schreiber}, title = {Analyse und Visualisierung biologischer Netzwerke}, journal = {Inform. Spektrum}, volume = {32}, number = {4}, pages = {301--309}, year = {2009}, url = {https://doi.org/10.1007/s00287-009-0351-8}, doi = {10.1007/S00287-009-0351-8}, timestamp = {Thu, 13 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/insk/Schreiber09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/dils/WeiseCGJKLSS09, author = {Stephan Weise and Christian Colmsee and Eva Grafahrend{-}Belau and Bj{\"{o}}rn H. Junker and Christian Klukas and Matthias Lange and Uwe Scholz and Falk Schreiber}, editor = {Norman W. Paton and Paolo Missier and Cornelia Hedeler}, title = {An Integration and Analysis Pipeline for Systems Biology in Crop Plant Metabolism}, booktitle = {Data Integration in the Life Sciences, 6th International Workshop, {DILS} 2009, Manchester, UK, July 20-22, 2009. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5647}, pages = {196--203}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-02879-3\_16}, doi = {10.1007/978-3-642-02879-3\_16}, timestamp = {Sun, 02 Jun 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/dils/WeiseCGJKLSS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/FesterSS09, author = {Thilo Fester and Falk Schreiber and Marc Strickert}, editor = {Ivo Grosse and Steffen Neumann and Stefan Posch and Falk Schreiber and Peter F. Stadler}, title = {CUDA-based Multi-core Implementation of MDS-based Bioinformatics Algorithms}, booktitle = {German Conference on Bioinformatics 2009, 28th to 30th September 2009, Martin Luther University Halle-Wittenberg, Germany}, series = {{LNI}}, volume = {{P-157}}, pages = {67--79}, publisher = {{GI}}, year = {2009}, url = {https://dl.gi.de/handle/20.500.12116/20311}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/FesterSS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/RohnKS09, author = {Hendrik Rohn and Christian Klukas and Falk Schreiber}, editor = {Ivo Grosse and Steffen Neumann and Stefan Posch and Falk Schreiber and Peter F. Stadler}, title = {Integration and Visualisation of Multimodal Biological Data}, booktitle = {German Conference on Bioinformatics 2009, 28th to 30th September 2009, Martin Luther University Halle-Wittenberg, Germany}, series = {{LNI}}, volume = {{P-157}}, pages = {105--115}, publisher = {{GI}}, year = {2009}, url = {https://dl.gi.de/handle/20.500.12116/20314}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/RohnKS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gd/AlbrechtKKKMPSW09, author = {Mario Albrecht and Andreas Kerren and Karsten Klein and Oliver Kohlbacher and Petra Mutzel and Wolfgang Paul and Falk Schreiber and Michael Wybrow}, editor = {David Eppstein and Emden R. Gansner}, title = {On Open Problems in Biological Network Visualization}, booktitle = {Graph Drawing, 17th International Symposium, {GD} 2009, Chicago, IL, USA, September 22-25, 2009. Revised Papers}, series = {Lecture Notes in Computer Science}, volume = {5849}, pages = {256--267}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-11805-0\_25}, doi = {10.1007/978-3-642-11805-0\_25}, timestamp = {Sun, 13 Nov 2022 09:57:30 +0100}, biburl = {https://dblp.org/rec/conf/gd/AlbrechtKKKMPSW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gi/WeiseCGJKLSS09, author = {Stephan Weise and Christian Colmsee and Eva Grafahrend{-}Belau and Bj{\"{o}}rn H. Junker and Christian Klukas and Matthias Lange and Uwe Scholz and Falk Schreiber}, editor = {Stefan Fischer and Erik Maehle and R{\"{u}}diger Reischuk}, title = {Datenaustausch und Datenintegration zur Modellierung und Analyse metabolischer Netzwerke am Beispiel von Kulturpflanzen}, booktitle = {39. Jahrestagung der Gesellschaft f{\"{u}}r Informatik, Im Focus das Leben, {INFORMATIK} 2009, L{\"{u}}beck, Germany, September 28 - October 2, 2009, Proceedings}, series = {{LNI}}, volume = {{P-154}}, pages = {693--697}, publisher = {{GI}}, year = {2009}, url = {https://dl.gi.de/handle/20.500.12116/31246}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gi/WeiseCGJKLSS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/iv/FungHKSX09, author = {David Cho Yau Fung and Seok{-}Hee Hong and Dirk Kosch{\"{u}}tzki and Falk Schreiber and Kai Xu}, editor = {Ebad Banissi and Liz J. Stuart and Theodor G. Wyeld and Mikael Jern and Gennady L. Andrienko and Nasrullah Memon and Reda Alhajj and Remo Aslak Burkhard and Georges G. Grinstein and Dennis P. Groth and Anna Ursyn and Jimmy Johansson and Camilla Forsell and Urska Cvek and Marjan Trutschl and Francis T. Marchese and Carsten Maple and Andrew J. Cowell and Andrew Vande Moere}, title = {Visual Analysis of Overlapping Biological Networks}, booktitle = {13th International Conference on Information Visualisation, {IV} 2009, 15-17 July 2009, Barcelona, Spain}, pages = {337--342}, publisher = {{IEEE} Computer Society}, year = {2009}, url = {https://doi.org/10.1109/IV.2009.55}, doi = {10.1109/IV.2009.55}, timestamp = {Thu, 27 Apr 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/iv/FungHKSX09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/visapp/PielotSMWVSW09, author = {Rainer Pielot and Udo Seiffert and Bertram Manz and Diana Weier and Frank Volke and Falk Schreiber and Winfriede Weschke}, editor = {Alpesh Ranchordas and Helder Ara{\'{u}}jo}, title = {Multimodal Registration of NMR-volumes and Histological Cross-sections of Barley Grains on the Cell Broadband Engine Processor}, booktitle = {{VISAPP} 2009 - Proceedings of the Fourth International Conference on Computer Vision Theory and Applications, Lisboa, Portugal, February 5-8, 2009 - Volume 1}, pages = {241--244}, publisher = {{INSTICC} Press}, year = {2009}, timestamp = {Fri, 07 Jan 2011 13:47:42 +0100}, biburl = {https://dblp.org/rec/conf/visapp/PielotSMWVSW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/gcb/2009, editor = {Ivo Grosse and Steffen Neumann and Stefan Posch and Falk Schreiber and Peter F. Stadler}, title = {German Conference on Bioinformatics 2009, 28th to 30th September 2009, Martin Luther University Halle-Wittenberg, Germany}, series = {{LNI}}, volume = {{P-157}}, publisher = {{GI}}, year = {2009}, url = {https://dl.gi.de/handle/20.500.12116/21225}, isbn = {978-3-88579-251-2}, timestamp = {Wed, 13 Jan 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/gcb/2009.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/Grafahrend-BelauSHSJGSWK08, author = {Eva Grafahrend{-}Belau and Falk Schreiber and Monika Heiner and Andrea Sackmann and Bj{\"{o}}rn H. Junker and Stefanie Grunwald and Astrid Speer and Katja Winder and Ina Koch}, title = {Modularization of biochemical networks based on classification of Petri net t-invariants}, journal = {{BMC} Bioinform.}, volume = {9}, year = {2008}, url = {https://doi.org/10.1186/1471-2105-9-90}, doi = {10.1186/1471-2105-9-90}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/Grafahrend-BelauSHSJGSWK08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/FungHKSX08, author = {David Cho Yau Fung and Seok{-}Hee Hong and Dirk Kosch{\"{u}}tzki and Falk Schreiber and Kai Xu}, title = {2.5D Visualisation of Overlapping Biological Networks}, journal = {J. Integr. Bioinform.}, volume = {5}, number = {1}, year = {2008}, url = {https://doi.org/10.2390/biecoll-jib-2008-90}, doi = {10.2390/BIECOLL-JIB-2008-90}, timestamp = {Thu, 27 Apr 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jib/FungHKSX08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/Grafahrend-BelauWKSJS08, author = {Eva Grafahrend{-}Belau and Stephan Weise and Dirk Kosch{\"{u}}tzki and Uwe Scholz and Bj{\"{o}}rn H. Junker and Falk Schreiber}, title = {MetaCrop: a detailed database of crop plant metabolism}, journal = {Nucleic Acids Res.}, volume = {36}, number = {Database-Issue}, pages = {954--958}, year = {2008}, url = {https://doi.org/10.1093/nar/gkm835}, doi = {10.1093/NAR/GKM835}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/Grafahrend-BelauWKSJS08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tvcg/DwyerMSSWW08, author = {Tim Dwyer and Kim Marriott and Falk Schreiber and Peter J. Stuckey and Michael Woodward and Michael Wybrow}, title = {Exploration of Networks using overview+detail with Constraint-based cooperative layout}, journal = {{IEEE} Trans. Vis. Comput. Graph.}, volume = {14}, number = {6}, pages = {1293--1300}, year = {2008}, url = {https://doi.org/10.1109/TVCG.2008.130}, doi = {10.1109/TVCG.2008.130}, timestamp = {Wed, 14 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/tvcg/DwyerMSSWW08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/KlukasS07, author = {Christian Klukas and Falk Schreiber}, title = {Dynamic exploration and editing of {KEGG} pathway diagrams}, journal = {Bioinform.}, volume = {23}, number = {3}, pages = {344--350}, year = {2007}, url = {https://doi.org/10.1093/bioinformatics/btl611}, doi = {10.1093/BIOINFORMATICS/BTL611}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/KlukasS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/TelgkampKSS07, author = {Michael Telgkamp and Dirk Kosch{\"{u}}tzki and Henning Schw{\"{o}}bbermeyer and Falk Schreiber}, title = {Community-based Linking of Biological Network Resources: Databases, Formats and Tools}, journal = {J. Integr. Bioinform.}, volume = {4}, number = {3}, year = {2007}, url = {https://doi.org/10.2390/biecoll-jib-2007-71}, doi = {10.2390/BIECOLL-JIB-2007-71}, timestamp = {Tue, 14 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jib/TelgkampKSS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/JunkerKS06, author = {Bj{\"{o}}rn H. Junker and Christian Klukas and Falk Schreiber}, title = {{VANTED:} {A} system for advanced data analysis and visualization in the context of biological networks}, journal = {{BMC} Bioinform.}, volume = {7}, pages = {109}, year = {2006}, url = {https://doi.org/10.1186/1471-2105-7-109}, doi = {10.1186/1471-2105-7-109}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/JunkerKS06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/JunkerKS06a, author = {Bj{\"{o}}rn H. Junker and Dirk Kosch{\"{u}}tzki and Falk Schreiber}, title = {Exploration of biological network centralities with CentiBiN}, journal = {{BMC} Bioinform.}, volume = {7}, pages = {219}, year = {2006}, url = {https://doi.org/10.1186/1471-2105-7-219}, doi = {10.1186/1471-2105-7-219}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/JunkerKS06a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/WeiseGKKSSJ06, author = {Stephan Weise and Ivo Grosse and Christian Klukas and Dirk Kosch{\"{u}}tzki and Uwe Scholz and Falk Schreiber and Bj{\"{o}}rn H. Junker}, title = {Meta-All: a system for managing metabolic pathway information}, journal = {{BMC} Bioinform.}, volume = {7}, pages = {465}, year = {2006}, url = {https://doi.org/10.1186/1471-2105-7-465}, doi = {10.1186/1471-2105-7-465}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/WeiseGKKSSJ06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/JunkerKS06, author = {Bj{\"{o}}rn H. Junker and Dirk Kosch{\"{u}}tzki and Falk Schreiber}, title = {Kinetic Modelling with the Systems Biology Modelling Environment SyBME}, journal = {J. Integr. Bioinform.}, volume = {3}, number = {1}, year = {2006}, url = {https://doi.org/10.2390/biecoll-jib-2006-18}, doi = {10.2390/BIECOLL-JIB-2006-18}, timestamp = {Tue, 14 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jib/JunkerKS06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apvis/KlukasSS06, author = {Christian Klukas and Falk Schreiber and Henning Schw{\"{o}}bbermeyer}, editor = {Kazuo Misue and Kozo Sugiyama and Jiro Tanaka}, title = {Coordinated perspectives and enhanced force-directed layout for the analysis of network motifs}, booktitle = {Asia-Pacific Symposium on Information Visualisation, {APVIS} 2006, Tokyo, Japan, February 1-3, 2006}, series = {{CRPIT}}, volume = {60}, pages = {39--48}, publisher = {Australian Computer Society}, year = {2006}, url = {https://dl.acm.org/citation.cfm?id=1151910}, timestamp = {Wed, 28 Nov 2018 12:57:16 +0100}, biburl = {https://dblp.org/rec/conf/apvis/KlukasSS06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apvis/DwyerHKSX06, author = {Tim Dwyer and Seok{-}Hee Hong and Dirk Kosch{\"{u}}tzki and Falk Schreiber and Kai Xu}, editor = {Kazuo Misue and Kozo Sugiyama and Jiro Tanaka}, title = {Visual analysis of network centralities}, booktitle = {Asia-Pacific Symposium on Information Visualisation, {APVIS} 2006, Tokyo, Japan, February 1-3, 2006}, series = {{CRPIT}}, volume = {60}, pages = {189--197}, publisher = {Australian Computer Society}, year = {2006}, url = {https://dl.acm.org/citation.cfm?id=1151931}, timestamp = {Thu, 27 Apr 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apvis/DwyerHKSX06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/SchreiberS05, author = {Falk Schreiber and Henning Schw{\"{o}}bbermeyer}, title = {MAVisto: a tool for the exploration of network motifs}, journal = {Bioinform.}, volume = {21}, number = {17}, pages = {3572--3574}, year = {2005}, url = {https://doi.org/10.1093/bioinformatics/bti556}, doi = {10.1093/BIOINFORMATICS/BTI556}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/SchreiberS05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jgaa/KlukasKS05, author = {Christian Klukas and Dirk Kosch{\"{u}}tzki and Falk Schreiber}, title = {Graph Pattern Analysis with PatternGravisto}, journal = {J. Graph Algorithms Appl.}, volume = {9}, number = {1}, pages = {19--29}, year = {2005}, url = {https://doi.org/10.7155/jgaa.00098}, doi = {10.7155/JGAA.00098}, timestamp = {Tue, 16 Feb 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jgaa/KlukasKS05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tcsb/SchreiberS05, author = {Falk Schreiber and Henning Schw{\"{o}}bbermeyer}, title = {Frequency Concepts and Pattern Detection for the Analysis of Motifs in Networks}, journal = {Trans. Comp. Sys. Biology}, volume = {3}, pages = {89--104}, year = {2005}, url = {https://doi.org/10.1007/11599128\_7}, doi = {10.1007/11599128\_7}, timestamp = {Wed, 06 Jan 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/tcsb/SchreiberS05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/BorisjukHKRS04, author = {Ljudmilla Borisjuk and Mohammad{-}Reza Hajirezaei and Christian Klukas and Hardy Rolletschek and Falk Schreiber}, title = {Integrating data from biological experiments into metabolic networks with the {DBE} information system}, journal = {Silico Biol.}, volume = {5}, number = {2}, pages = {93--102}, year = {2004}, url = {http://content.iospress.com/articles/in-silico-biology/isb00171}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/BorisjukHKRS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jib/BrandesDS04, author = {Ulrik Brandes and Tim Dwyer and Falk Schreiber}, title = {Visual Understanding of Metabolic Pathways Across Organisms Using Layout in Two and a Half Dimensions}, journal = {J. Integr. Bioinform.}, volume = {1}, number = {1}, year = {2004}, url = {https://doi.org/10.2390/biecoll-jib-2004-2}, doi = {10.2390/BIECOLL-JIB-2004-2}, timestamp = {Tue, 14 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jib/BrandesDS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/acsc/FriedrichS04, author = {Carsten Friedrich and Falk Schreiber}, editor = {Vladimir Estivill{-}Castro}, title = {Flexible Layering in Hierarchical Drawings with Nodes of Arbitrary Size}, booktitle = {Computer Science 2004, Twenty-Seveth Australasian Computer Science Conference (ACSC2004), Dunedin, New Zealand, January 2004}, series = {{CRPIT}}, volume = {26}, pages = {369--376}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV26Friedrich.html}, timestamp = {Wed, 10 Feb 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/acsc/FriedrichS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/DwyerRS04, author = {Tim Dwyer and Hardy Rolletschek and Falk Schreiber}, editor = {Yi{-}Ping Phoebe Chen}, title = {Representing Experimental Biological Data in Metabolic Networks}, booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January 18-22, 2004, Dunedin, New Zealand}, series = {{CRPIT}}, volume = {29}, pages = {13--20}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Dwyer.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/DwyerRS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apvis/DwyerS04, author = {Tim Dwyer and Falk Schreiber}, editor = {Neville Churcher and Clare Churcher}, title = {Optimal Leaf Ordering for Two and a Half Dimensional Phylogenetic Tree Visualisation}, booktitle = {Australasian Symposium on Information Visualisation, InVis.au, Christchurch, New Zealand, 23-24 January 2004}, series = {{CRPIT}}, volume = {35}, pages = {109--115}, publisher = {Australian Computer Society}, year = {2004}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV35Dwyer.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apvis/DwyerS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/KoschutzkiS04, author = {Dirk Kosch{\"{u}}tzki and Falk Schreiber}, editor = {Robert Giegerich and Jens Stoye}, title = {Comparison of Centralities for Biological Networks}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {199--206}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28667}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/KoschutzkiS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/vissym/BrandesDS04, author = {Ulrik Brandes and Tim Dwyer and Falk Schreiber}, editor = {Oliver Deussen and Charles D. Hansen and Daniel A. Keim and Dietmar Saupe}, title = {Visual Triangulation of Network-Based Phylogenetic Trees}, booktitle = {6th Joint Eurographics - {IEEE} {TCVG} Symposium on Visualization, VisSym 2004, Konstanz, Germany, May 19-21, 2004}, pages = {75--83}, publisher = {Eurographics Association}, year = {2004}, url = {https://doi.org/10.2312/VisSym/VisSym04/075-084}, doi = {10.2312/VISSYM/VISSYM04/075-084}, timestamp = {Wed, 01 Jul 2020 11:42:27 +0200}, biburl = {https://dblp.org/rec/conf/vissym/BrandesDS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@incollection{DBLP:books/sp/04/BrandenburgFPRS04, author = {Franz J. Brandenburg and Michael Forster and Andreas Pick and Marcus Raitner and Falk Schreiber}, editor = {Michael J{\"{u}}nger and Petra Mutzel}, title = {BioPath - Exploration and Visualization of Biochemical Pathways}, booktitle = {Graph Drawing Software}, pages = {215--235}, publisher = {Springer}, year = {2004}, url = {https://doi.org/10.1007/978-3-642-18638-7\_10}, doi = {10.1007/978-3-642-18638-7\_10}, timestamp = {Sat, 03 Aug 2019 22:40:46 +0200}, biburl = {https://dblp.org/rec/books/sp/04/BrandenburgFPRS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/vlc/Schreiber03, author = {Falk Schreiber}, title = {Visual comparison of metabolic pathways}, journal = {J. Vis. Lang. Comput.}, volume = {14}, number = {4}, pages = {327--340}, year = {2003}, url = {https://doi.org/10.1016/S1045-926X(03)00030-2}, doi = {10.1016/S1045-926X(03)00030-2}, timestamp = {Fri, 26 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/vlc/Schreiber03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/apbc/Schreiber03, author = {Falk Schreiber}, editor = {Yi{-}Ping Phoebe Chen}, title = {Comparison of Metabolic Pathways using Constraint Graph Drawing}, booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February 4-7, 2003, Adelaide, Australia}, series = {{CRPIT}}, volume = {19}, pages = {105--110}, publisher = {Australian Computer Society}, year = {2003}, url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Schreiber.html}, timestamp = {Thu, 25 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/apbc/Schreiber03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gd/BrandesDS03, author = {Ulrik Brandes and Tim Dwyer and Falk Schreiber}, editor = {Giuseppe Liotta}, title = {Visualizing Related Metabolic Pathways in Two and a Half Dimensions}, booktitle = {Graph Drawing, 11th International Symposium, {GD} 2003, Perugia, Italy, September 21-24, 2003, Revised Papers}, series = {Lecture Notes in Computer Science}, volume = {2912}, pages = {111--122}, publisher = {Springer}, year = {2003}, url = {https://doi.org/10.1007/978-3-540-24595-7\_10}, doi = {10.1007/978-3-540-24595-7\_10}, timestamp = {Sun, 13 Nov 2022 09:57:34 +0100}, biburl = {https://dblp.org/rec/conf/gd/BrandesDS03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/Schreiber02, author = {Falk Schreiber}, title = {High quality visualization of biochemical pathways in BioPath}, journal = {Silico Biol.}, volume = {2}, number = {2}, pages = {59--73}, year = {2002}, url = {http://content.iospress.com/articles/in-silico-biology/isb00029}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/Schreiber02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/ForsterPRSB02, author = {Michael Forster and Andreas Pick and Marcus Raitner and Falk Schreiber and Franz{-}Josef Brandenburg}, title = {The system architecture of the BioPath system}, journal = {Silico Biol.}, volume = {2}, number = {3}, pages = {415--426}, year = {2002}, url = {http://content.iospress.com/articles/in-silico-biology/isb00060}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/ForsterPRSB02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@phdthesis{DBLP:phd/basesearch/Schreiber01, author = {Falk Schreiber}, title = {Visualisierung biochemischer Reaktionsnetze}, school = {Passau University, Germany}, year = {2001}, url = {https://opus4.kobv.de/opus4-uni-passau/frontdoor/index/index/docId/18}, urn = {urn:nbn:de:bvb:739-opus-215}, timestamp = {Wed, 20 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/phd/basesearch/Schreiber01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/BrandenburgFPRS01, author = {Franz{-}Josef Brandenburg and Michael Forster and Andreas Pick and Marcus Raitner and Falk Schreiber}, editor = {Edgar Wingender}, title = {BioPath Visualization of Biochemical Pathways}, booktitle = {Computer science and biology: Proceedings of the German Conference on Bioinformatics, {GCB} 2001, October 7-10, 2001, Braunschweig, Germany}, pages = {11--15}, publisher = {German Research Center for Biotechnology}, year = {2001}, timestamp = {Tue, 15 Mar 2005 13:06:29 +0100}, biburl = {https://dblp.org/rec/conf/gcb/BrandenburgFPRS01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gd/BrandenburgFPRS00, author = {Franz{-}Josef Brandenburg and Michael Forster and Andreas Pick and Marcus Raitner and Falk Schreiber}, editor = {Petra Mutzel and Michael J{\"{u}}nger and Sebastian Leipert}, title = {BioPath}, booktitle = {Graph Drawing, 9th International Symposium, {GD} 2001 Vienna, Austria, September 23-26, 2001, Revised Papers}, series = {Lecture Notes in Computer Science}, volume = {2265}, pages = {455--456}, publisher = {Springer}, year = {2001}, url = {https://doi.org/10.1007/3-540-45848-4\_43}, doi = {10.1007/3-540-45848-4\_43}, timestamp = {Sun, 13 Nov 2022 09:57:35 +0100}, biburl = {https://dblp.org/rec/conf/gd/BrandenburgFPRS00.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/KanneST99, author = {Carl{-}Christian Kanne and Falk Schreiber and Dietrich Tr{\"{u}}mbach}, title = {Interactive Biochemical Pathways}, booktitle = {Proceedings of the German Conference on Bioinformatics, {GCB} 1999, October 4-6, 1999, Hannover, Germany}, pages = {204--205}, year = {1999}, timestamp = {Fri, 02 Aug 2019 15:48:16 +0200}, biburl = {https://dblp.org/rec/conf/gcb/KanneST99.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gd/BrandenburgJMMS99, author = {Franz{-}Josef Brandenburg and Michael J{\"{u}}nger and Joe Marks and Petra Mutzel and Falk Schreiber}, editor = {Jan Kratochv{\'{\i}}l}, title = {Graph-Drawing Contest Report}, booktitle = {Graph Drawing, 7th International Symposium, GD'99, Stir{\'{\i}}n Castle, Czech Republic, September 1999, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {1731}, pages = {400--409}, publisher = {Springer}, year = {1999}, url = {https://doi.org/10.1007/3-540-46648-7\_41}, doi = {10.1007/3-540-46648-7\_41}, timestamp = {Sun, 13 Nov 2022 09:57:36 +0100}, biburl = {https://dblp.org/rec/conf/gd/BrandenburgJMMS99.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gd/KanneST99, author = {Carl{-}Christian Kanne and Falk Schreiber and Dietrich Tr{\"{u}}mbach}, editor = {Jan Kratochv{\'{\i}}l}, title = {Electronic Biochemical Pathways}, booktitle = {Graph Drawing, 7th International Symposium, GD'99, Stir{\'{\i}}n Castle, Czech Republic, September 1999, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {1731}, pages = {418--419}, publisher = {Springer}, year = {1999}, url = {https://doi.org/10.1007/3-540-46648-7\_44}, doi = {10.1007/3-540-46648-7\_44}, timestamp = {Sun, 13 Nov 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/gd/KanneST99.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gd/SchreiberS98, author = {Falk Schreiber and Konstantin Skodinis}, editor = {Sue Whitesides}, title = {NP-Completeness of Some Tree-Clustering Problems}, booktitle = {Graph Drawing, 6th International Symposium, GD'98, Montr{\'{e}}al, Canada, August 1998, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {1547}, pages = {288--301}, publisher = {Springer}, year = {1998}, url = {https://doi.org/10.1007/3-540-37623-2\_22}, doi = {10.1007/3-540-37623-2\_22}, timestamp = {Sun, 13 Nov 2022 09:57:36 +0100}, biburl = {https://dblp.org/rec/conf/gd/SchreiberS98.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/tacas/BeeckBCDFKMSS97, author = {Michael von der Beeck and Volker Braun and Andreas Cla{\ss}en and Achim Dannecker and Carsten Friedrich and Dirk Kosch{\"{u}}tzki and Tiziana Margaria and Falk Schreiber and Bernhard Steffen}, editor = {Ed Brinksma}, title = {Graphs in METAFrame: The Unifying Power of Polymorphism}, booktitle = {Tools and Algorithms for Construction and Analysis of Systems, Third International Workshop, {TACAS} '97, Enschede, The Netherlands, April 2-4, 1997, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {1217}, pages = {112--129}, publisher = {Springer}, year = {1997}, url = {https://doi.org/10.1007/BFb0035384}, doi = {10.1007/BFB0035384}, timestamp = {Sun, 02 Jun 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/tacas/BeeckBCDFKMSS97.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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