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Falk Schreiber
Person information

- affiliation: University of Konstanz, Germany
- affiliation (former): Monash University, Melbourne, Australia
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2020 – today
- 2022
- [j79]Anna Niarakis
, Dagmar Waltemath
, James Glazier, Falk Schreiber, Sarah M. Keating
, David P. Nickerson, Claudine Chaouiya
, Anne Siegel
, Vincent Noël
, Henning Hermjakob
, Tomás Helikar
, Sylvain Soliman
, Laurence Calzone
:
Addressing barriers in comprehensiveness, accessibility, reusability, interoperability and reproducibility of computational models in systems biology. Briefings Bioinform. 23(4) (2022) - [j78]Matthias Kraus
, Johannes Fuchs, Björn Sommer, Karsten Klein, Ulrich Engelke, Daniel A. Keim, Falk Schreiber:
Immersive Analytics with Abstract 3D Visualizations: A Survey. Comput. Graph. Forum 41(1): 201-229 (2022) - [j77]Falk Schreiber, Daniel Weiskopf:
Quantitative visual computing. it Inf. Technol. 64(4-5): 119-120 (2022) - [j76]Karsten Klein, Michael Sedlmair, Falk Schreiber:
Immersive analytics: An overview. it Inf. Technol. 64(4-5): 155-168 (2022) - [j75]Falk Schreiber, Tobias Czauderna
:
Design considerations for representing systems biology information with the Systems Biology Graphical Notation. J. Integr. Bioinform. 19(2) (2022) - [j74]Michael Aichem, Karsten Klein, Tobias Czauderna, Dimitar Garkov, Jinxin Zhao, Jian Li, Falk Schreiber:
Towards a hybrid user interface for the visual exploration of large biomolecular networks using virtual reality. J. Integr. Bioinform. 19(4) (2022) - [j73]Lucas Joos, Sabrina Jaeger-Honz, Falk Schreiber, Daniel A. Keim, Karsten Klein:
Visual Comparison of Networks in VR. IEEE Trans. Vis. Comput. Graph. 28(11): 3651-3661 (2022) - [j72]Denis Bienroth, Hieu T. Nim, Dimitar Garkov
, Karsten Klein
, Sabrina Jaeger-Honz, Mirana Ramialison
, Falk Schreiber:
Spatially resolved transcriptomics in immersive environments. Vis. Comput. Ind. Biomed. Art 5(1): 2 (2022) - [c49]Dimitar Garkov, Christoph Müller, Matthias Braun, Daniel Weiskopf, Falk Schreiber:
Research Data Curation in Visualization : Position Paper. BELIV 2022: 56-65 - 2021
- [j71]Karsten Klein, Dimitar Garkov
, Sina Rütschlin, Thomas Böttcher
, Falk Schreiber:
QSDB - a graphical Quorum Sensing Database. Database J. Biol. Databases Curation 2021 (2021) - [j70]Karsten Klein, Dimitar Garkov, Sina Rütschlin, Thomas Böttcher, Falk Schreiber:
Corrigendum to: QSDB - a graphical Quorum Sensing Database. Database J. Biol. Databases Curation 2021 (2021) - [j69]Michael Aichem
, Tobias Czauderna
, Yan Zhu, Jinxin Zhao, Matthias Klapperstück, Karsten Klein, Jian Li
, Falk Schreiber:
Visual exploration of large metabolic models. Bioinform. 37(23): 4460-4468 (2021) - [j68]Matthias Kraus
, Karsten Klein, Johannes Fuchs
, Daniel A. Keim, Falk Schreiber, Michael Sedlmair
, Theresa-Marie Rhyne:
The Value of Immersive Visualization. IEEE Computer Graphics and Applications 41(4): 125-132 (2021) - [j67]Falk Schreiber, Padraig Gleeson, Martin Golebiewski, Thomas E. Gorochowski, Michael Hucka, Sarah M. Keating
, Matthias König
, Chris J. Myers, David P. Nickerson, Björn Sommer, Dagmar Waltemath
:
Specifications of standards in systems and synthetic biology: status and developments in 2021. J. Integr. Bioinform. 18(3) (2021) - [j66]Karsten Klein
, Sabrina Jaeger
, Jörg Melzheimer, Bettina Wachter
, Heribert Hofer, Artur Baltabayev, Falk Schreiber:
Visual analytics of sensor movement data for cheetah behaviour analysis. J. Vis. 24(4): 807-825 (2021) - [j65]Karsten Klein
, Michael Aichem, Ying Zhang, Stefan Erk, Björn Sommer, Falk Schreiber:
TEAMwISE: synchronised immersive environments for exploration and analysis of animal behaviour. J. Vis. 24(4): 845-859 (2021) - 2020
- [j64]Falk Schreiber, Björn Sommer, Tobias Czauderna
, Martin Golebiewski, Thomas E. Gorochowski, Michael Hucka
, Sarah M. Keating
, Matthias König, Chris J. Myers, David P. Nickerson
, Dagmar Waltemath
:
Specifications of standards in systems and synthetic biology: status and developments in 2020. J. Integr. Bioinform. 17(2-3) (2020) - [j63]Dagmar Waltemath
, Martin Golebiewski
, Michael L. Blinov
, Padraig Gleeson
, Henning Hermjakob
, Michael Hucka
, Esther Thea Inau
, Sarah M. Keating
, Matthias König
, Olga Krebs
, Rahuman S. Malik-Sheriff
, David P. Nickerson
, Ernst Oberortner, Herbert M. Sauro
, Falk Schreiber, Lucian P. Smith
, Melanie I. Stefan
, Ulrike Wittig
, Chris J. Myers
:
The first 10 years of the international coordination network for standards in systems and synthetic biology (COMBINE). J. Integr. Bioinform. 17(2-3) (2020) - [c48]Joseph Kotlarek, Oh-Hyun Kwon, Kwan-Liu Ma, Peter Eades, Andreas Kerren, Karsten Klein, Falk Schreiber:
A Study of Mental Maps in Immersive Network Visualization. PacificVis 2020: 1-10 - [i3]Joseph Kotlarek, Oh-Hyun Kwon, Kwan-Liu Ma, Peter Eades, Andreas Kerren, Karsten Klein, Falk Schreiber:
A Study of Mental Maps in Immersive Network Visualization. CoRR abs/2001.06462 (2020)
2010 – 2019
- 2019
- [j62]Adrien Rougny
, Vasundra Touré
, Stuart L. Moodie, Irina Balaur
, Tobias Czauderna
, Hanna Borlinghaus
, Ugur Dogrusoz
, Alexander Mazein
, Andreas Dräger
, Michael L. Blinov
, Alice Villéger, Robin Haw
, Emek Demir, Huaiyu Mi
, Anatoly A. Sorokin
, Falk Schreiber, Augustin Luna
:
Systems Biology Graphical Notation: Process Description language Level 1 Version 2.0. J. Integr. Bioinform. 16(2) (2019) - [j61]Falk Schreiber, Björn Sommer, Gary D. Bader, Padraig Gleeson
, Martin Golebiewski, Michael Hucka
, Sarah M. Keating
, Matthias König
, Chris J. Myers
, David P. Nickerson
, Dagmar Waltemath
:
Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2019. J. Integr. Bioinform. 16(2) (2019) - [j60]Dimitar Garkov
, Karsten Klein, Christian Klukas, Falk Schreiber:
Mental-Map Preserving Visualisation of Partitioned Networks in Vanted. J. Integr. Bioinform. 16(3) (2019) - [j59]Marcel Friedrichs
, Alban Shoshi, Piotr Chmura
, Jon C. Ison, Veit Schwämmle
, Falk Schreiber, Ralf Hofestädt, Björn Sommer:
JIB.tools 2.0 - A Bioinformatics Registry for Journal Published Tools with Interoperability to bio.tools. J. Integr. Bioinform. 16(4) (2019) - [c47]Sabrina Jaeger
, Karsten Klein, Lucas Joos, Johannes Zagermann, Michael de Ridder, Jinman Kim, Jean Yee Hwa Yang
, Ulrike Pfeil, Harald Reiterer
, Falk Schreiber:
Challenges for Brain Data Analysis in VR Environments. PacificVis 2019: 42-46 - [c46]Bjorn Sommer, Stefan P. Feyer, Daniel Klinkhammer, Karsten Klein, Jonathan Wieland, Daniel Immanuel Fink
, Wolfgang Fiedler, Andrea Flack, Máté Nagy, Martin Wikelski, Harald Reiterer
, Falk Schreiber:
BinocularsVR - A VR experience for the exhibition "From Lake Constance to Africa, a long distance travel with ICARUS". ERVR 2019 - [c45]Karsten Klein, Michael Aichem, Björn Sommer, Stefan Erk, Ying Zhang, Falk Schreiber:
TEAMwISE: Synchronised Immersive Environments for Exploration and Analysis of Movement Data. VINCI 2019: 9:1-9:5 - [c44]Karsten Klein, Sabrina Jaeger
, Jörg Melzheimer, Bettina Wachter
, Heribert Hofer, Artur Baltabayev, Falk Schreiber:
Visual Analytics for Cheetah Behaviour Analysis. VINCI 2019: 16:1-16:8 - [p6]Carla Binucci, Ulrik Brandes, Tim Dwyer, Martin Gronemann, Reinhard von Hanxleden, Marc J. van Kreveld
, Petra Mutzel, Marcus Schaefer, Falk Schreiber, Bettina Speckmann:
10 Reasons to Get Interested in Graph Drawing. Computing and Software Science 2019: 85-104 - 2018
- [j58]Falk Schreiber, Gary D. Bader, Padraig Gleeson, Martin Golebiewski, Michael Hucka
, Sarah M. Keating
, Nicolas Le Novère, Chris J. Myers, David P. Nickerson, Björn Sommer, Dagmar Waltemath:
Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2017. J. Integr. Bioinform. 15(1) (2018) - [j57]Niklas Biere
, Mehmood Ghaffar, Anja Doebbe, Daniel Jäger, Nils Rothe, Benjamin M. Friedrich, Ralf Hofestädt, Falk Schreiber, Olaf Kruse
, Björn Sommer:
Heuristic Modeling and 3D Stereoscopic Visualization of a Chlamydomonas reinhardtii Cell. J. Integr. Bioinform. 15(2) (2018) - [j56]Matthias Klapperstück, Tobias Czauderna
, Cagatay Goncu, Jaroslaw Glowacki, Tim Dwyer
, Falk Schreiber, Kim Marriott:
ContextuWall: Multi-site collaboration using display walls. J. Vis. Lang. Comput. 46: 35-42 (2018) - [c43]Artur Baltabayev, Alexej Gluschkow, Johannes Blank, Gero Birkhölzer, Jean Büsche, Martin Kern, Fabian Klopfer, Lisa-Maria Mayer, Gabriel Scheibler, Karsten Klein, Falk Schreiber, Björn Sommer:
Virtual Reality for Sensor Data Visualization and Analysis. ERVR 2018 - [c42]Falk Schreiber:
Immersive Analytics - Methodology and Applications in the Life Sciences. VISIGRAPP (1: GRAPP) 2018: 9 - [c41]Yunlong Wang
, Corinna Breitinger, Björn Sommer, Falk Schreiber, Harald Reiterer
:
Comparing Sequential and Temporal Patterns from Human Mobility Data for Next-Place Prediction. UMAP (Adjunct Publication) 2018: 157-164 - [c40]Mehmood Ghaffar, Niklas Biere, Daniel Jäger, Karsten Klein, Falk Schreiber, Olaf Kruse, Björn Sommer:
3D Modelling and Visualisation of Heterogeneous Cell Membranes in Blender. VINCI 2018: 64-71 - [p5]Tim Dwyer, Kim Marriott, Tobias Isenberg, Karsten Klein, Nathalie Henry Riche, Falk Schreiber, Wolfgang Stuerzlinger
, Bruce H. Thomas
:
Immersive Analytics: An Introduction. Immersive Analytics 2018: 1-23 - [p4]Tobias Czauderna
, Jason Haga, Jinman Kim, Matthias Klapperstück, Karsten Klein, Torsten W. Kuhlen, Steffen Oeltze-Jafra, Björn Sommer, Falk Schreiber:
Immersive Analytics Applications in Life and Health Sciences. Immersive Analytics 2018: 289-330 - [e3]Kim Marriott, Falk Schreiber, Tim Dwyer, Karsten Klein, Nathalie Henry Riche, Takayuki Itoh, Wolfgang Stuerzlinger, Bruce H. Thomas:
Immersive Analytics. Lecture Notes in Computer Science 11190, Springer 2018, ISBN 978-3-030-01387-5 [contents] - [i2]Yunlong Wang, Björn Sommer, Falk Schreiber, Harald Reiterer:
Clustering with Temporal Constraints on Spatio-Temporal Data of Human Mobility. CoRR abs/1807.00546 (2018) - 2017
- [j55]Björn Sommer, Falk Schreiber:
Integration and virtual reality exploration of biomedical data with CmPI and VANTED. it Inf. Technol. 59(4): 181 (2017) - [j54]Ralf Hofestädt, Falk Schreiber, Björn Sommer, Jens Allmer:
Computational miRNomics - Integrative Approaches. J. Integr. Bioinform. 14(1) (2017) - [c39]Falk Schreiber:
Analyse und Aufzeigen von Zusammenhängen. GI-Jahrestagung 2017: 597 - [c38]Hieu T. Nim, Björn Sommer, Karsten Klein, Andrea Flack, Kamran Safi
, Máté Nagy, Wolfgang Fiedler, Martin Wikelski, Falk Schreiber:
Design Considerations for Immersive Analytics of Bird Movements Obtained by Miniaturised GPS Sensors. VCBM 2017: 27-31 - [c37]Andreas Kerren, Kostiantyn Kucher, Yuan-Fang Li, Falk Schreiber:
MDS-based Visual Survey of Biological Data Visualization Techniques. EuroVis (Posters) 2017: 85-87 - [c36]Chris J. Myers, Gary D. Bader, Padraig Gleeson, Martin Golebiewski, Michael Hucka
, Nicolas Le Novère, David P. Nickerson, Falk Schreiber, Dagmar Waltemath:
A brief history of COMBINE. WSC 2017: 884-895 - 2016
- [j53]Falk Schreiber, Gary D. Bader
, Padraig Gleeson
, Martin Golebiewski, Michael Hucka
, Nicolas Le Novère, Chris J. Myers, David P. Nickerson
, Björn Sommer, Dagmar Waltemath:
Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2016. J. Integr. Bioinform. 13(3) (2016) - [j52]Dagmar Waltemath
, Jonathan R. Karr
, Frank T. Bergmann, Vijayalakshmi Chelliah, Michael Hucka
, Marcus Krantz, Wolfram Liebermeister
, Pedro Mendes, Chris J. Myers, Pinar Pir, Begum Alaybeyoglu, Naveen K. Aranganathan, Kambiz Baghalian, Arne T. Bittig, Paulo E. Pinto Burke, Matteo Cantarelli, Yin Hoon Chew
, Rafael S. Costa, Joseph Cursons
, Tobias Czauderna
, Arthur P. Goldberg, Harold F. Gómez, Jens Hahn
, Tuure Hameri, Daniel F. Hernandez Gardiol, Denis Kazakiewicz, Ilya Kiselev
, Vincent Knight-Schrijver, Christian Knüpfer, Matthias König
, Daewon Lee
, Audald Lloret-Villas
, Nikita Mandrik, J. Kyle Medley, Bertrand Moreau, Hojjat Naderi-Meshkin
, Sucheendra K. Palaniappan, Daniel Priego-Espinosa
, Martin Scharm, Mahesh Sharma, Kieran Smallbone, Natalie J. Stanford
, Je-Hoon Song, Tom Theile, Milenko Tokic, Namrata Tomar, Vasundra Touré, Jannis Uhlendorf, Thawfeek M. Varusai
, Leandro H. Watanabe, Florian Wendland, Markus Wolfien
, James T. Yurkovich, Yan Zhu
, Argyris Zardilis, Anna Zhukova, Falk Schreiber:
Toward Community Standards and Software for Whole-Cell Modeling. IEEE Trans. Biomed. Eng. 63(10): 2007-2014 (2016) - [c35]Matthias Klapperstück, Tobias Czauderna
, Cagatay Goncu, Jaroslaw Glowacki, Tim Dwyer
, Falk Schreiber, Kim Marriott:
ContextuWall: Peer Collaboration Using (Large) Displays. BDVA 2016: 1-8 - [c34]Hieu T. Nim, Mengyang Wang, Yujie Zhu, Björn Sommer, Falk Schreiber, Sarah E. Boyd, Stephen Jia Wang
:
Communicating the Effect of Human Behaviour on the Great Barrier Reef via Mixed Reality Visualisation. BDVA 2016: 1-6 - [p3]Ina Koch, Falk Schreiber:
Introduction. Modeling in Systems Biology, The Petri Net Approach 2016: 3-18 - [i1]Takayuki Itoh, Kim Marriott, Falk Schreiber, Uwe Wössner:
Immersive Analytics: A new multidisciplinary initiative to explore future interaction technologies for data analytics (NII Shonan Meeting 2016-2). NII Shonan Meet. Rep. 2016 (2016) - 2015
- [j51]Syed Murtuza Baker
, C. Hart Poskar, Falk Schreiber, Björn H. Junker:
A unified framework for estimating parameters of kinetic biological models. BMC Bioinform. 16: 104:1-104:21 (2015) - [j50]Huaiyu Mi, Falk Schreiber, Stuart L. Moodie, Tobias Czauderna
, Emek Demir, Robin Haw
, Augustin Luna, Nicolas Le Novère, Anatoly A. Sorokin
, Alice Villéger:
Systems Biology Graphical Notation: Activity Flow language Level 1 Version 1.2 . J. Integr. Bioinform. 12(2) (2015) - [j49]Falk Schreiber, Gary D. Bader
, Martin Golebiewski
, Michael Hucka
, Benjamin Kormeier, Nicolas Le Novère, Chris J. Myers
, David P. Nickerson
, Björn Sommer, Dagmar Waltemath, Stephan Weise
:
Specifications of Standards in Systems and Synthetic Biology. J. Integr. Bioinform. 12(2) (2015) - [j48]Anatoly A. Sorokin
, Nicolas Le Novère, Augustin Luna, Tobias Czauderna
, Emek Demir, Robin Haw
, Huaiyu Mi, Stuart L. Moodie, Falk Schreiber, Alice Villéger:
Systems Biology Graphical Notation: Entity Relationship language Level 1 Version 2. J. Integr. Bioinform. 12(2) (2015) - [c33]Björn Sommer, Stephen Jia Wang
, Lifeng Xu, Ming Chen
, Falk Schreiber:
Hybrid-Dimensional Visualization and Interaction - Integrating 2D and 3D Visualization with Semi-Immersive Navigation Techniques. BDVA 2015: 65-72 - [c32]Tom Chandler, Maxime Cordeil, Tobias Czauderna
, Tim Dwyer
, Jaroslaw Glowacki, Cagatay Goncu, Matthias Klapperstück, Karsten Klein, Kim Marriott, Falk Schreiber, Elliot Wilson:
Immersive Analytics. BDVA 2015: 73-80 - [c31]Hieu T. Nim, Terence Done, Falk Schreiber, Sarah E. Boyd
:
Interactive Geolocational and Coral Compositional Visualisation of Great Barrier Reef Heat Stress Data. BDVA 2015: 81-87 - 2014
- [j47]Andreas Kerren, Falk Schreiber:
Why Integrate InfoVis and SciVis?: An Example from Systems Biology. IEEE Computer Graphics and Applications 34(6): 69-73 (2014) - [j46]Ina Koch, Wolfgang Reisig, Falk Schreiber:
Petri Nets in the Biosciences. it Inf. Technol. 56(2): 43-45 (2014) - [j45]Matthias Klapperstück, Falk Schreiber:
BioNetLink - An Architecture for Working with Network Data. J. Integr. Bioinform. 11(2) (2014) - [p2]Andreas Kerren, Falk Schreiber:
Network Visualization for Integrative Bioinformatics. Approaches in Integrative Bioinformatics 2014: 173-202 - 2013
- [j44]Syed Murtuza Baker
, C. Hart Poskar, Falk Schreiber, Björn H. Junker:
An improved constraint filtering technique for inferring hidden states and parameters of a biological model. Bioinform. 29(8): 1052-1059 (2013) - [j43]Tobias Czauderna
, Michael Wybrow
, Kim Marriott, Falk Schreiber:
Conversion of KEGG metabolic pathways to SBGN maps including automatic layout. BMC Bioinform. 14: 250 (2013) - [j42]Torsten Vogt, Tobias Czauderna
, Falk Schreiber:
Translation of SBGN maps: Process Description to Activity Flow. BMC Syst. Biol. 7: 115 (2013) - [j41]Finja Büchel
, Nicolas Rodriguez
, Neil Swainston, Clemens Wrzodek
, Tobias Czauderna
, Roland Keller, Florian Mittag
, Michael Schubert
, Mihai Glont
, Martin Golebiewski
, Martijn P. van Iersel
, Sarah M. Keating
, Matthias Rall, Michael Wybrow
, Henning Hermjakob
, Michael Hucka
, Douglas B. Kell
, Wolfgang Müller, Pedro Mendes
, Andreas Zell, Claudine Chaouiya
, Julio Saez-Rodriguez
, Falk Schreiber, Camille Laibe
, Andreas Dräger
, Nicolas Le Novère:
Path2Models: large-scale generation of computational models from biochemical pathway maps. BMC Syst. Biol. 7: 116 (2013) - [j40]Ilir Jusufi
, Andreas Kerren, Falk Schreiber:
Exploring biological data: Mappings between ontology- and cluster-based representations. Inf. Vis. 12(3-4): 291-307 (2013) - [j39]Ralf Hofestädt, Benjamin Kormeier, Matthias Lange, Falk Schreiber, Björn Sommer, Stephan Weise
:
Editorial. J. Integr. Bioinform. 10(1) (2013) - [c30]Oliver Kohlbacher, Falk Schreiber, Matthew O. Ward:
Multivariate Networks in the Life Sciences. Multivariate Network Visualization 2013: 61-73 - [c29]Falk Schreiber, Andreas Kerren, Katy Börner, Hans Hagen, Dirk Zeckzer:
Heterogeneous Networks on Multiple Levels. Multivariate Network Visualization 2013: 175-206 - [c28]Christian Colmsee, Tobias Czauderna, Eva Grafahrend-Belau, Anja Hartmann, Matthias Lange, Martin Mascher, Stephan Weise, Uwe Scholz, Falk Schreiber:
OPTIMAS-DW, MetaCrop and VANTED: A Case Study for Data Integration, Curation and Visualisation in Life Sciences. GI-Jahrestagung 2013: 1834-1840 - [r1]Christian Bachmaier, Ulrik Brandes, Falk Schreiber:
Biological Networks. Handbook of Graph Drawing and Visualization 2013: 621-651 - 2012
- [j38]Johannes Gräßler, Dirk Koschützki, Falk Schreiber:
CentiLib: comprehensive analysis and exploration of network centralities. Bioinform. 28(8): 1178-1179 (2012) - [j37]Martijn P. van Iersel
, Alice Villéger, Tobias Czauderna
, Sarah E. Boyd
, Frank T. Bergmann
, Augustin Luna, Emek Demir, Anatoly A. Sorokin
, Ugur Dogrusöz, Yukiko Matsuoka, Akira Funahashi
, Mirit I. Aladjem, Huaiyu Mi, Stuart L. Moodie, Hiroaki Kitano, Nicolas Le Novère, Falk Schreiber:
Software support for SBGN maps: SBGN-ML and LibSBGN. Bioinform. 28(15): 2016-2021 (2012) - [j36]Hendrik Rohn, Anja Hartmann, Astrid Junker
, Björn H. Junker, Falk Schreiber:
FluxMap: A VANTED add-on for the visual exploration of flux distributions in biological networks. BMC Syst. Biol. 6: 33 (2012) - [j35]Hendrik Rohn, Astrid Junker
, Anja Hartmann, Eva Grafahrend-Belau, Hendrik Treutler, Matthias Klapperstück, Tobias Czauderna, Christian Klukas, Falk Schreiber:
VANTED v2: a framework for systems biology applications. BMC Syst. Biol. 6: 139 (2012) - [j34]Ilir Jusufi
, Christian Klukas, Andreas Kerren, Falk Schreiber:
Guiding the interactive exploration of metabolic pathway interconnections. Inf. Vis. 11(2): 136-150 (2012) - [j33]Katrin Lotz, Falk Schreiber, Röbbe Wünschiers:
Nutrilyzer: A Tool for Deciphering Atomic Stoichiometry of Differentially Expressed Paralogous Proteins. J. Integr. Bioinform. 9(2) (2012) - [j32]Hendrik Mehlhorn
, Matthias Lange, Uwe Scholz
, Falk Schreiber:
IDPredictor: predict database links in biomedical database. J. Integr. Bioinform. 9(2) (2012) - [j31]Falk Schreiber, Christian Colmsee
, Tobias Czauderna
, Eva Grafahrend-Belau, Anja Hartmann, Astrid Junker
, Björn H. Junker, Matthias Klapperstück, Uwe Scholz
, Stephan Weise
:
MetaCrop 2.0: managing and exploring information about crop plant metabolism. Nucleic Acids Res. 40(Database-Issue): 1173-1177 (2012) - [c27]Ilir Jusufi
, Andreas Kerren, Vladyslav Aleksakhin, Falk Schreiber:
Visualization of mappings between the gene ontology and cluster trees. Visualization and Data Analysis 2012: 82940N - [c26]Andreas Kerren, Falk Schreiber:
Toward the role of interaction in visual analytics. WSC 2012: 420:1-420:13 - 2011
- [j30]Hendrik Rohn, Christian Klukas, Falk Schreiber:
Creating views on integrated multidomain data. Bioinform. 27(13): 1839-1845 (2011) - [j29]Anja Hartmann, Tobias Czauderna
, Roberto Hoffmann, Nils Stein
, Falk Schreiber:
HTPheno: An Image Analysis Pipeline for High-Throughput Plant Phenotyping. BMC Bioinform. 12: 148 (2011) - [j28]Stephan Weise
, Jinbo Chen, Björn H. Junker, Matthias Klapperstück, Matthias Lange
, Falk Schreiber, Uwe Scholz:
Das Informationssystem MetaCrop zur Unterstützung systembiologischer Forschung an Kulturpflanzen. it Inf. Technol. 53(5): 234-240 (2011) - [j27]Hendrik Mehlhorn
, Falk Schreiber:
DBE2 - Management of experimental data for the VANTED system. J. Integr. Bioinform. 8(2) (2011) - [c25]Hendrik Mehlhorn, Falk Schreiber:
Integration and exploration of biological networks. GI-Jahrestagung 2011: 160 - [c24]Hendrik Rohn, Christian Klukas, Falk Schreiber:
Visual Analytics of Multimodal Biological Data. IMAGAPP/IVAPP 2011: 256-261 - [e2]Ina Koch, Wolfgang Reisig, Falk Schreiber:
Modeling in Systems Biology, The Petri Net Approach. Computational Biology 16, Springer 2011, ISBN 978-1-84996-473-9 [contents] - 2010
- [j26]Tobias Czauderna
, Christian Klukas, Falk Schreiber:
Editing, validating and translating of SBGN maps. Bioinform. 26(18): 2340-2341 (2010) - [j25]Michael Scharfe, Rainer Pielot, Falk Schreiber:
Fast multi-core based multimodal registration of 2D cross-sections and 3D datasets. BMC Bioinform. 11: 20 (2010) - [j24]Christian Klukas, Falk Schreiber:
Integration of -omics data and networks for biomedical research with VANTED. J. Integr. Bioinform. 7(2) (2010) - [j23]Klaus Hippe, Christian Colmsee, Tobias Czauderna, Eva Grafahrend-Belau, Björn H. Junker, Christian Klukas, Uwe Scholz
, Falk Schreiber, Stephan Weise:
Novel Developments of the MetaCrop Information System for Facilitating Systems Biological Approaches. J. Integr. Bioinform. 7(3) (2010)
2000 – 2009
- 2009
- [j22]Eva Grafahrend-Belau, Christian Klukas, Björn H. Junker, Falk Schreiber:
FBA-SimVis: interactive visualization of constraint-based metabolic models. Bioinform. 25(20): 2755-2757 (2009) - [j21]Zahra Razaghi Moghadam Kashani, Hayedeh Ahrabian, Elahe Elahi, Abbas Nowzari-Dalini, Elnaz Saberi Ansari, Sahar Asadi
, Shahin Mohammadi
, Falk Schreiber, Ali Masoudi-Nejad:
Kavosh: a new algorithm for finding network motifs. BMC Bioinform. 10: 318 (2009) - [j20]Falk Schreiber, Tim Dwyer, Kim Marriott, Michael Wybrow
:
A generic algorithm for layout of biological networks. BMC Bioinform. 10: 375 (2009) - [j19]Falk Schreiber:
Analyse und Visualisierung biologischer Netzwerke. Inform. Spektrum 32(4): 301-309 (2009) - [c23]Stephan Weise
, Christian Colmsee
, Eva Grafahrend-Belau, Björn H. Junker, Christian Klukas, Matthias Lange
, Uwe Scholz, Falk Schreiber:
An Integration and Analysis Pipeline for Systems Biology in Crop Plant Metabolism. DILS 2009: 196-203 - [c22]Thilo Fester, Falk Schreiber, Marc Strickert:
CUDA-based Multi-core Implementation of MDS-based Bioinformatics Algorithms. GCB 2009: 67-79 - [c21]Hendrik Rohn, Christian Klukas, Falk Schreiber:
Integration and Visualisation of Multimodal Biological Data. GCB 2009: 105-115 - [c20]Mario Albrecht, Andreas Kerren, Karsten Klein, Oliver Kohlbacher
, Petra Mutzel
, Wolfgang Paul, Falk Schreiber, Michael Wybrow
:
On Open Problems in Biological Network Visualization. GD 2009: 256-267 - [c19]Stephan Weise, Christian Colmsee, Eva Grafahrend-Belau, Björn H. Junker, Christian Klukas, Matthias Lange, Uwe Scholz, Falk Schreiber:
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