GCB 2009:
Halle-Wittenberg,
Germany
Ivo Grosse, Steffen Neumann, Stefan Posch, Falk Schreiber, Peter F. Stadler (Eds.):
German Conference on Bioinformatics 2009, 28th to 30th September 2009, Martin Luther University Halle-Wittenberg, Germany.
LNI 157 GI 2009, ISBN 978-3-88579-251-2 
- Ronny Lorenz, Christoph Flamm, Ivo L. Hofacker:
2D Projections of RNA Folding Landscapes.
11-20
- Thomas Fober, Marco Mernberger, Ralph Moritz, Eyke Hüllermeier:
Graph-Kernels for the Comparative Analysis of Protein Active Sites.
21-31
- Inken Wohlers, Lars Petzold, Francisco S. Domingues, Gunnar W. Klau:
Aligning Protein Structures Using Distance Matrices and Combinatorial Optimization.
33-43
- Theodore Alexandrov:
Self-taught Learning for Classification of Mass Spectrometry Data: A Case Study of Colorectal Cancer.
45-54
- Juliane Perner, André Altmann, Thomas Lengauer:
Semi-Supervised Learning for Improving Prediction of HIV Drug Resistance.
55-65
- Thilo Fester, Falk Schreiber, Marc Strickert:
CUDA-based Multi-core Implementation of MDS-based Bioinformatics Algorithms.
67-79
- Loïc Royer, Conrad Plake, Michael Schroeder:
Identifying Hot Cancer and Novel Novel Cell-cycle Genes from Literature.
81-92
- Todd Ingalls, Georg Martius, Manja Marz, Sonja J. Proshaka, Marc Hellmuth:
Converting DNA to Music: ComposAlign.
93-103
- Hendrik Rohn, Christian Klukas, Falk Schreiber:
Integration and Visualisation of Multimodal Biological Data.
105-115
- Eduardo Gorrón, Fausto Rodríguez, Diana Bernal, Silvia Restrepo, Joe Tohme:
A New Method for the Design of Degenerate Primers and its Use to Identify Homologues of Apomixis-associated Genes in Brachiaria.
117-131
- Oliver Stegle, Katherine J. Denby, David L. Wild, Stuart McHattie, Andrew Meade, Zoubin Ghahramani, Karsten M. Borgwardt:
Discovering Temporal Patterns of Differential Gene Expression in Microarray Time Series.
133-142
- Mingzhou Song, Chung-Chien Hong, Yang Zhang, Laura Buttitta, Bruce Edgar:
Comparative Generalized Logic Modeling Reveals Differential Gene Interactions during Cell Cycle Exit in Drosophila Wing Development.
143-152
- Achuthanunni Chokkathukalam, Mark G. Poolman, Chiara Ferrazzi, David A. Fell:
Expression Profiles of Metabolic Models to Predict Compartmentation of Enzymes in Multicompartmental Systems.
153-162
- Zhengyu Ouyang, Mingzhou Song:
Comparative Identification of Differential Interactions from Trajectories of Dynamic Biological Networks.
163-172
- Hisayuki Horai, Masanori Arita, Yuya Ojima, Yoshito Nihei, Shigehiko Kanaya, Takeshi Nishioka:
Traceable Analysis of Multiple-Stage Mass Spectra through Precursor-Product Annotations.
173-178
- Christoph Kaleta, Luis F. de Figueiredo, Jörn Behre, Stefan Schuster:
Computing Elementary Flux Modes in Genome-scale Metabolic Networks.
179-189
- Marcel Kronfeld, Andreas Dräger, Moritz Aschoff, Andreas Zell:
On the Benefits of Multimodal Optimization for Metablic Network Modeling.
191-200
- Anna Katharina Dehof, Alexander Rurainski, Hans-Peter Lenhof, Andreas Hildebrandt:
Automated Bond Order Assignment as an Optimization Problem.
201-209
- Peter Menzel, Jan Gorodkin, Peter F. Stadler:
Maximum Likelihood Estimation of Weight Matrices for Targeted Homology Search.
211-220
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