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Publication search results
found 526 matches
- 2021
- Marvin van Aalst, Oliver Ebenhöh, Anna Matuszynska:
Constructing and analysing dynamic models with modelbase v1.2.3: a software update. BMC Bioinform. 22(1): 203 (2021) - Khushnood Abbas, Alireza Abbasi, Shi Dong, Niu Ling, Laihang Yu, Bolun Chen, Shi-Min Cai, Qambar Hasan:
Application of network link prediction in drug discovery. BMC Bioinform. 22(1): 187 (2021) - Fetulhak Abdurahman, Kinde Anlay Fante, Mohammed Aliy:
Malaria parasite detection in thick blood smear microscopic images using modified YOLOV3 and YOLOV4 models. BMC Bioinform. 22(1): 112 (2021) - Zachary B. Abrams, Dwayne G. Tally, Lin Zhang, Caitlin E. Coombes, Philip R. O. Payne, Lynne V. Abruzzo, Kevin R. Coombes:
Pattern recognition in lymphoid malignancies using CytoGPS and Mercator. BMC Bioinform. 22(1): 100 (2021) - Paulien Adamse, Emilie Dagand, Karen Bohmert-Tatarev, Daniela Wahler, Manoela Miranda, Esther J. Kok, Joachim Bendiek:
GMO Genetic Elements Thesaurus (GMO-GET): a controlled vocabulary for the consensus designation of introduced or modified genetic elements in genetically modified organisms. BMC Bioinform. 22(1): 48 (2021) - Badri Adhikari, Bikash Shrestha, Matthew Bernardini, Jie Hou, Jamie Lea:
DISTEVAL: a web server for evaluating predicted protein distances. BMC Bioinform. 22(1): 8 (2021) - Joaquim Aguirre-Plans, Alberto Meseguer, Ruben Molina-Fernandez, Manuel Alejandro Marín-López, Gaurav Jumde, Kevin Casanova, Jaume Bonet, Oriol Fornes, Narcis Fernandez-Fuentes, Baldo Oliva:
SPServer: split-statistical potentials for the analysis of protein structures and protein-protein interactions. BMC Bioinform. 22(1): 4 (2021) - Elma Akand, John M. Murray:
NGlyAlign: an automated library building tool to align highly divergent HIV envelope sequences. BMC Bioinform. 22(1): 54 (2021) - Shaya Akbarinejad, Mostafa Hadadian Nejad Yousefi, Maziar Goudarzi:
SVNN: an efficient PacBio-specific pipeline for structural variations calling using neural networks. BMC Bioinform. 22(1): 335 (2021) - Julia Åkesson, Zelmina Lubovac-Pilav, Rasmus Magnusson, Mika Gustafsson:
ComHub: Community predictions of hubs in gene regulatory networks. BMC Bioinform. 22(1): 58 (2021) - Hayam Alamro, Mai Alzamel, Costas S. Iliopoulos, Solon P. Pissis, Steven Watts:
IUPACpal: efficient identification of inverted repeats in IUPAC-encoded DNA sequences. BMC Bioinform. 22(1): 51 (2021) - Leonardo Alexandre, Rafael S. Costa, Rui Henriques:
DI2: prior-free and multi-item discretization of biological data and its applications. BMC Bioinform. 22(1): 426 (2021) - Theo R. Allnutt, Alexandra J. Roth-Schulze, Leonard C. Harrison:
Expanding the taxonomic range in the fecal metagenome. BMC Bioinform. 22(1): 312 (2021) - Lisa Amrhein, Christiane Fuchs:
stochprofML: stochastic profiling using maximum likelihood estimation in R. BMC Bioinform. 22(1): 123 (2021) - John Anders, Hannes Petruschke, Nico Jehmlich, Sven-Bastiaan Haange, Martin von Bergen, Peter F. Stadler:
A workflow to identify novel proteins based on the direct mapping of peptide-spectrum-matches to genomic locations. BMC Bioinform. 22(1): 277 (2021) - Kevin De Angeli, Shang Gao, Mohammed M. Alawad, Hong-Jun Yoon, Noah Schaefferkoetter, Xiao-Cheng Wu, Eric B. Durbin, Jennifer A. Doherty, Antoinette Stroup, Linda Coyle, Lynne Penberthy, Georgia D. Tourassi:
Deep active learning for classifying cancer pathology reports. BMC Bioinform. 22(1): 113 (2021) - William F. Anjos, Gabriel C. Lanes, Vasco A. Azevedo, Anderson Santos:
GENPPI: standalone software for creating protein interaction networks from genomes. BMC Bioinform. 22(1): 596 (2021) - Adrià Antich, Creu Palacin, Owen S. Wangensteen, Xavier Turon:
To denoise or to cluster, that is not the question: optimizing pipelines for COI metabarcoding and metaphylogeography. BMC Bioinform. 22(1): 177 (2021) - Sayed Asaduzzaman, Md. Raihan Ahmed, Hasin Rehana, Setu Chakraborty, Md. Shariful Islam, Touhid Bhuiyan:
Machine learning to reveal an astute risk predictive framework for Gynecologic Cancer and its impact on women psychology: Bangladeshi perspective. BMC Bioinform. 22(1): 213 (2021) - Aseel Awdeh, Marcel Turcotte, Theodore J. Perkins:
WACS: improving ChIP-seq peak calling by optimally weighting controls. BMC Bioinform. 22(1): 69 (2021) - Jeongmin Bae, Hajin Jeon, Min-Soo Kim:
GPrimer: a fast GPU-based pipeline for primer design for qPCR experiments. BMC Bioinform. 22(1): 220 (2021) - Eu-Tteum Baek, Hyung Jeong Yang, Soo-Hyung Kim, Guee-Sang Lee, In-Jae Oh, Sae-Ryung Kang, Jung-Joon Min:
Survival time prediction by integrating cox proportional hazards network and distribution function network. BMC Bioinform. 22(1): 192 (2021) - Leila Baghaarabani, Sama Goliaei, Mohammad-Hadi Foroughmand-Araabi, Seyed Peyman Shariatpanahi, Bahram Goliaei:
Conifer: clonal tree inference for tumor heterogeneity with single-cell and bulk sequencing data. BMC Bioinform. 22(1): 416 (2021) - Wei Bai, Mei Dong, Longhai Li, Cindy Feng, Wei Xu:
Randomized quantile residuals for diagnosing zero-inflated generalized linear mixed models with applications to microbiome count data. BMC Bioinform. 22(1): 564 (2021) - Athanasios D. Balomenos, Victoria Stefanou, Elias S. Manolakos:
Analytics and visualization tools to characterize single-cell stochasticity using bacterial single-cell movie cytometry data. BMC Bioinform. 22(3): 531 (2021) - Sagnik Banerjee, Priyanka Bhandary, Margaret Woodhouse, Taner Z. Sen, Roger P. Wise, Carson M. Andorf:
FINDER: an automated software package to annotate eukaryotic genes from RNA-Seq data and associated protein sequences. BMC Bioinform. 22(1): 205 (2021) - Rosa Barcelona-Cabeza, Walter Sanseverino, Riccardo Aiese Cigliano:
isoCNV: in silico optimization of copy number variant detection from targeted or exome sequencing data. BMC Bioinform. 22(3): 530 (2021) - Thomas E. Bartlett:
Fusion of single-cell transcriptome and DNA-binding data, for genomic network inference in cortical development. BMC Bioinform. 22(1): 301 (2021) - Jochen Bathke, Gesine Lühken:
OVarFlow: a resource optimized GATK 4 based Open source Variant calling workFlow. BMC Bioinform. 22(1): 402 (2021) - Saptarshi Bej, Anne-Marie Galow, Robert David, Markus Wolfien, Olaf Wolkenhauer:
Automated annotation of rare-cell types from single-cell RNA-sequencing data through synthetic oversampling. BMC Bioinform. 22(1): 557 (2021)
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