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Publication search results
found 926 matches
- 2021
- Junzhong Ji, Hanghang Xiao, Cuicui Yang:
HFADE-FMD: a hybrid approach of fireworks algorithm and differential evolution strategies for functional module detection in protein-protein interaction networks. Appl. Intell. 51(2): 1118-1132 (2021) - 2020
- Ruibo Gao
, Tianhua Yang
, Yaxue Shen
, Yifan Rong
, Kang Ye
, Junlan Nie:
RPI-MCNNBLSTM: BLSTM Networks Combining With Multiple Convolutional Neural Network Models to Predict RNA-Protein Interactions Using Multiple Biometric Features Codes. IEEE Access 8: 189869-189877 (2020) - Zhourun Wu, Qing Liao, Bin Liu:
A comprehensive review and evaluation of computational methods for identifying protein complexes from protein-protein interaction networks. Briefings Bioinform. 21(5): 1531-1548 (2020) - Min Zeng, Fuhao Zhang, Fang-Xiang Wu
, Yaohang Li, Jianxin Wang
, Min Li
:
Protein-protein interaction site prediction through combining local and global features with deep neural networks. Bioinform. 36(4): 1114-1120 (2020) - Adrià Alcalà, Ricardo Alberich, Mercè Llabrés
, Francesc Rosselló, Gabriel Valiente:
AligNet: alignment of protein-protein interaction networks. BMC Bioinform. 21-S(6): 265 (2020) - Pasan C. Fernando
, Paula M. Mabee, Erliang Zeng:
Integration of anatomy ontology data with protein-protein interaction networks improves the candidate gene prediction accuracy for anatomical entities. BMC Bioinform. 21(1): 442 (2020) - Babak Khorsand, Abdorreza Savadi, Mahmoud Naghibzadeh:
Comprehensive host-pathogen protein-protein interaction network analysis. BMC Bioinform. 21(1): 400 (2020) - Leilei Liu, Xianglei Zhu, Yi Ma, Haiyin Piao
, Yaodong Yang, Xiaotian Hao, Yue Fu, Li Wang, Jiajie Peng:
Combining sequence and network information to enhance protein-protein interaction prediction. BMC Bioinform. 21-S(16): 537 (2020) - Mercè Llabrés
, Gabriel Riera, Francesc Rosselló, Gabriel Valiente:
Alignment of biological networks by integer linear programming: virus-host protein-protein interaction networks. BMC Bioinform. 21-S(6): 434 (2020) - Wei Wang
, Hehe Lv, Yuan Zhao:
Predicting DNA binding protein-drug interactions based on network similarity. BMC Bioinform. 21(1): 322 (2020) - Jarmila Nahálková:
Linking TPPII to the protein interaction and signalling networks. Comput. Biol. Chem. 87: 107291 (2020) - Sabyasachi Patra, Anjali Mohapatra:
Protein complex prediction in interaction network based on network motif. Comput. Biol. Chem. 89: 107399 (2020) - Nikhila T. Suresh, Vimina E. R., Krishnakumar U.:
Multi-scale top-down approach for modelling epileptic protein-protein interaction network analysis to identify driver nodes and pathways. Comput. Biol. Chem. 88: 107323 (2020) - Yuanmiao Gui, Ru Jing Wang, Xue Wang, Yuan Yuan Wei:
Using Deep Neural Networks to Improve the Performance of Protein-Protein Interactions Prediction. Int. J. Pattern Recognit. Artif. Intell. 34(13): 2052012:1-2052012:20 (2020) - Cong Sun
, Zhihao Yang, Lei Wang, Yin Zhang, Hongfei Lin, Jian Wang:
Attention guided capsule networks for chemical-protein interaction extraction. J. Biomed. Informatics 103: 103392 (2020) - Natali Acosta-Tapia, Johan Fabian Galindo, Rosa Baldiris:
Insights into the Effect of Lowe Syndrome-Causing Mutation p.Asn591Lys of OCRL-1 through Protein-Protein Interaction Networks and Molecular Dynamics Simulations. J. Chem. Inf. Model. 60(2): 1019-1027 (2020) - Lindy Astl, Gabrielle Stetz, Gennady M. Verkhivker:
Allosteric Mechanism of the Hsp90 Chaperone Interactions with Cochaperones and Client Proteins by Modulating Communication Spines of Coupled Regulatory Switches: Integrative Atomistic Modeling of Hsp90 Signaling in Dynamic Interaction Networks. J. Chem. Inf. Model. 60(7): 3616-3631 (2020) - Palak Kaushal
, Shailendra Singh:
Network-based disease gene prioritization based on Protein-Protein Interaction Networks. Netw. Model. Anal. Health Informatics Bioinform. 9(1): 55 (2020) - Jarmila Nahálková
:
Exploring the Sirtuin Functionality in Ageing Through Human Protein Interaction Networks. SN Comput. Sci. 1(3): 183 (2020) - Min Li
, Xiangmao Meng, Ruiqing Zheng, Fang-Xiang Wu
, Yaohang Li
, Yi Pan
, Jianxin Wang
:
Identification of Protein Complexes by Using a Spatial and Temporal Active Protein Interaction Network. IEEE ACM Trans. Comput. Biol. Bioinform. 17(3): 817-827 (2020) - Lei Wang
, Zhu-Hong You
, De-Shuang Huang
, Fengfeng Zhou
:
Combining High Speed ELM Learning with a Deep Convolutional Neural Network Feature Encoding for Predicting Protein-RNA Interactions. IEEE ACM Trans. Comput. Biol. Bioinform. 17(3): 972-980 (2020) - Peng Gang Sun
, Yi-Ning Quan, Qiguang Miao:
Interdependent Patterns in Protein-Protein Interaction Networks. IEEE Trans. Netw. Sci. Eng. 7(4): 3257-3265 (2020) - Ho Yin Yuen, Jesper Jansson:
Better Link Prediction for Protein-Protein Interaction Networks. BIBE 2020: 53-60 - Dongha Choi, Hyunju Lee:
Extracting Chemical-Protein Interactions via Calibrated Deep Neural Network and Self-training. EMNLP (Findings) 2020: 2086-2095 - Kathryn Cooper, Nathan Cornelius, William Gasper, Sanjukta Bhowmick, Hesham Ali:
On the Planarity of Validated Complexes of Model Organisms in Protein-Protein Interaction Networks. ICCS (1) 2020: 652-666 - Wei Liu, Liangyu Ma, Yuliang Tang:
A New Scheme for Essential Proteins Identification in Dynamic Weighted Protein-Protein Interaction Networks. ICAIS (1) 2020: 195-206 - Wenzheng Ma, Wenzheng Bao, Yi Cao, Yuehui Chen:
RFQ-ANN: Artificial Neural Network Model for Predicting Protein-Protein Interaction Based on Sparse Matrix. ICIC (2) 2020: 446-454 - Xiaojuan Wang, Pengwei Hu, Lun Hu:
A Novel Stochastic Block Model for Network-Based Prediction of Protein-Protein Interactions. ICIC (2) 2020: 621-632 - Nian Wang, Min Zeng, Jiashuai Zhang, Yiming Li, Min Li:
Ess-NEXG: Predict Essential Proteins by Constructing a Weighted Protein Interaction Network Based on Node Embedding and XGBoost. ISBRA 2020: 95-104 - Ilinka Ivanoska, E. Petreska, Biljana Risteska Stojkoska, Slobodan Kalajdziski, Kire Trivodaliev:
Comparative Analysis of Network Embeddings for Functional Annotation in Protein Interaction Networks. MIPRO 2020: 203-208
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