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Publication search results
found 34 matches
- 2014
- Roman Jaksik
, Michal Marczyk
, Joanna Polanska
, Joanna Rzeszowska-Wolny
:
Sources of High Variance between Probe Signals in Affymetrix Short Oligonucleotide Microarrays. Sensors 14(1): 532-548 (2014) - 2012
- Faouzi Jaziri, David R. C. Hill, Nicolas Parisot, Jérémie Denonfoux, Eric Dugat-Bony
, Eric Peyretaillade, Pierre Peyret
:
MetaExploArrays: A Large-Scale Oligonucleotide Probe Design Software for Explorative DNA Microarrays. PDCAT 2012: 664-671 - 2009
- K. Myriam Kroll, Gerard T. Barkema
, Enrico Carlon
:
Linear model for fast background subtraction in oligonucleotide microarrays. Algorithms Mol. Biol. 4: 15 (2009) - Chikara Furusawa
, Naoaki Ono
, Shingo Suzuki, Tomoharu Agata, Hiroshi Shimizu, Tetsuya Yomo:
Model-based analysis of non-specific binding for background correction of high-density oligonucleotide microarrays. Bioinform. 25(1): 36-41 (2009) - G. Golfier, Sophie Lemoine, A. van Miltenberg, A. Bendjoudi, J. Rossier, Stéphane Le Crom
, Marie-Claude Potier
:
Selection of oligonucleotides for whole-genome microarrays with semi-automatic update. Bioinform. 25(1): 128-129 (2009) - Yang Liu, Lee T. Sam, Jianrong Li, Yves A. Lussier
:
Robust methods for accurate diagnosis using pan-microbiological oligonucleotide microarrays. BMC Bioinform. 10(S-2) (2009) - Conrad J. Burden
:
Intensity isotherms and distributions on oligonucleotide microarrays. IEEE Congress on Evolutionary Computation 2009: 3095-3102 - 2008
- Naoaki Ono
, Shingo Suzuki, Chikara Furusawa
, Tomoharu Agata, Akiko Kashiwagi, Hiroshi Shimizu, Tetsuya Yomo:
An improved physico-chemical model of hybridization on high-density oligonucleotide microarrays. Bioinform. 24(10): 1278-1285 (2008) - Huanying Ge, Chao Cheng, Lei M. Li:
A probe-treatment-reference (PTR) model for the analysis of oligonucleotide expression microarrays. BMC Bioinform. 9 (2008) - Naoaki Ono
, Shingo Suzuki, Chikara Furusawa, Hiroshi Shimizu, Tetsuya Yomo:
Quantitative expression analysis using oligonucleotide microarrays based on a physico-chemical model. BIONETICS 2008: 18 - Radhakrishnan Nagarajan:
Power-Law Signatures and Patchiness in Genechip Oligonucleotide Microarrays. Computational Intelligence in Biomedicine and Bioinformatics 2008: 359-377 - 2007
- Chunlei Wu, Haitao Zhao, Keith A. Baggerly, Roberto Carta, Li Zhang:
Short oligonucleotide probes containing G-stacks display abnormal binding affinity on Affymetrix microarrays. Bioinform. 23(19): 2566-2572 (2007) - Guangan Hu
, Manuel Llinás, Jingguang Li, Peter Rainer Preiser
, Zbynek Bozdech
:
Selection of long oligonucleotides for gene expression microarrays using weighted rank-sum strategy. BMC Bioinform. 8 (2007) - Jun Lu, Joseph C. Lee, Marc L. Salit, Margaret C. Cam:
Transcript-based redefinition of grouped oligonucleotide probe sets using AceView: High-resolution annotation for microarrays. BMC Bioinform. 8 (2007) - 2006
- Dick de Ridder, Frank J. T. Staal, Jacques J. M. van Dongen
, Marcel J. T. Reinders:
Maximum significance clustering of oligonucleotide microarrays. Bioinform. 22(3): 326-331 (2006) - Sérgio A. de Carvalho, Sven Rahmann:
Improving the Layout of Oligonucleotide Microarrays: Pivot Partitioning. WABI 2006: 321-332 - 2005
- Xiaojun Di, Hajime Matsuzaki, Teresa A. Webster, Earl Hubbell
, Guoying Liu, Shoulian Dong, Dan Bartell, Jing Huang, Richard Chiles, Geoffrey Yang, Mei-mei Shen, David Kulp, Giulia C. Kennedy, Rui Mei, Keith W. Jones, Simon Cawley:
Dynamic model based algorithms for screening and genotyping over 100K SNPs on oligonucleotide microarrays. Bioinform. 21(9): 1958-1963 (2005) - Eric C. Rouchka, Abdelnaby Khalyfa, Nigel G. F. Cooper:
MPrime: efficient large scale multiple primer and oligonucleotide design for customized gene microarrays. BMC Bioinform. 6: 175 (2005) - G. B. Ferrara, L. Delfino, Francesco Masulli
, Stefano Rovetta
, R. Sensi:
A fuzzy approach to image analysis in HLA typing using oligonucleotide microarrays. Fuzzy Sets Syst. 152(1): 37-48 (2005) - Dick de Ridder, Marcel J. T. Reinders, Frank J. T. Staal, Jacques J. M. van Dongen
:
Maximum signi.cance clustering of oligonucleotide microarrays. CSB Workshops 2005: 93-94 - 2004
- Yoseph Barash
, Elinor Dehan, Meir Krupsky, Wilbur Franklin, Marc Geraci, Nir Friedman
, Naftali Kaminski:
Comparative analysis of algorithms for signal quantitation from oligonucleotide microarrays. Bioinform. 20(6): 839-846 (2004) - Andrew C. James, Jim G. Veitch, Ali R. Zareh, Timothy Triche:
Sensitivity and specificity of five abundance estimators for high-density oligonucleotide microarrays. Bioinform. 20(7): 1060-1065 (2004) - Nancie Reymond, Hubert Charles
, Laurent Duret
, Federica Calevro
, Guillaume Beslon, Jean-Michel Fayard:
ROSO: optimizing oligonucleotide probes for microarrays. Bioinform. 20(2): 271-273 (2004) - Chao Lu:
Improving the scaling normalization for high-density oligonucleotide GeneChip expression microarrays. BMC Bioinform. 5: 103 (2004) - Harald Meier, Andreas Krause
, Markus Kräutner, Arndt Bode:
Development and implementation of a parallel algorithm for the fast design of oligonucleotide probe sets for diagnostic DNA microarrays. Concurr. Pract. Exp. 16(9): 873-893 (2004) - 2003
- Karsten H. Siegmund, Ulrich E. Steiner
, Clemens Richert:
ChipCheck-A Program Predicting Total Hybridization Equilibria for DNA Binding to Small Oligonucleotide Microarrays. J. Chem. Inf. Comput. Sci. 43(6): 2153-2162 (2003) - Henrik Bjørn Nielsen, Rasmus Wernersson
, Steen Knudsen:
Design of oligonucleotides for microarrays and perspectives for design of multi-transcriptome arrays. Nucleic Acids Res. 31(13): 3491-3496 (2003) - Andreas Krause, Markus Kräutner, Harald Meier:
Accurate Method for Fast Design of Diagnostic Oligonucleotide Probe Sets for DNA Microarrays. IPDPS 2003: 154 - 2002
- Jean-Marie Rouillard, Christopher J. Herbert, Michael Zuker:
OligoArray: genome-scale oligonucleotide design for microarrays. Bioinform. 18(3): 486-487 (2002) - Hao Chen, Burt M. Sharp:
Oliz, a suite of Perl scripts that assist in the design of microarrays using 50mer oligonucleotides from the 3' untranslated region. BMC Bioinform. 3: 27 (2002)
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