• case-insensitive prefix search: default
  e.g., sig matches "SIGIR" as well as "signal"
• exact word search: append dollar sign ($) to word
  e.g., graph$ matches "graph", but not "graphics"
• boolean and: separate words by space
  e.g., codd model
• boolean or: connect words by pipe symbol (|)
  e.g., graph|network

Update May 7, 2017: Please note that we had to disable the phrase search operator (.) and the boolean not operator (-) due to technical problems. For the time being, phrase search queries will yield regular prefix search result, and search terms preceded by a minus will be interpreted as regular (positive) search terms.

found 109 matches

• 2020
• 
  Ana Helena Tavares, Jakob Raymaekers, Peter J. Rousseeuw, Paula Brito, Vera Afreixo:
  Clustering genomic words in human DNA using peaks and trends of distributions. Adv. Data Anal. Classif. 14(1): 57-76 (2020)
• 
  Hui Yu, Shilin Zhao, Scott Ness, Huining Kang, Quanhu Sheng, David C. Samuels, Olufunmilola Oyebamiji, Ying-Yong Zhao, Yan Guo:
  Non-canonical RNA-DNA differences and other human genomic features are enriched within very short tandem repeats. PLoS Comput. Biol. 16(6) (2020)
• 
  Pietro Crovari, Fabio Catania, Pietro Pinoli, Philipp Roytburg, Asier Salzar, Franca Garzotto, Stefano Ceri:
  OK, DNA!: A Conversational Interface to Explore Genomic Data. CIU 2020: 38:1-38:3
• 2019
• 
  Blake Hewelt, Haiqing Li, Mohit Kumar Jolly, Prakash Kulkarni, Isa Mambetsariev, Ravi Salgia:
  The DNA walk and its demonstration of deterministic chaos - relevance to genomic alterations in lung cancer. Bioinform. 35(16): 2738-2748 (2019)
• 
  Yaoyong Li, Elisa Aguilar-Martinez, Andrew D. Sharrocks:
  Geno2proteo, a Tool for Batch Retrieval of DNA and Protein Sequences from Any Genomic or Protein Regions. J. Integr. Bioinform. 16(3) (2019)
• 2018
• 
  Xiaofang Wang, Beelee Chua, Ahjeong Son:
  The Implications of Fragmented Genomic DNA Size Range on the Hybridization Efficiency in NanoGene Assay. Sensors 18(8): 2646 (2018)
• 2017
• 
  Haihua Liu, Xiaoxiao Shang, Hao Zhu:
  LncRNA/DNA binding analysis reveals losses and gains and lineage specificity of genomic imprinting in mammals. Bioinform. 33(10): 1431-1436 (2017)
• 2016
• 
  Xihao Hu, Christina Huan Shi, Kevin Y. Yip:
  A novel method for discovering local spatial clusters of genomic regions with functional relationships from DNA contact maps. Bioinform. 32(12): 111-120 (2016)
• 
  Vera Afreixo, João M. O. S. Rodrigues, Carlos A. C. Bastos, Raquel M. Silva:
  The exceptional genomic word symmetry along DNA sequences. BMC Bioinform. 17: 59 (2016)
• 
  David Rio Deiros, Richard A. Gibbs, Jeffrey Rogers:
  DNAism: exploring genomic datasets on the web with Horizon Charts. BMC Bioinform. 17: 49 (2016)
• 
  Jinhua Wu, Zewei Luo, Ning Jiang:
  Design of efficient simplified genomic DNA and bisulfite sequencing in large plant populations. Quant. Biol. 4(3): 226-239 (2016)
• 
  Ebtehal S. Elewa, Mohamed B. Abdelhalim, Mai S. Mabrouk:
  An Efficient System for Finding Functional Motifs in Genomic DNA Sequences by Using Nature-Inspired Algorithms. AISI 2016: 215-224
• 
  Mohammad Shahrokh Esfahani, Aaron M. Newman, Florian Scherer, Robert Tibshirani, Maximilian Diehn, Ash A. Alizadeh:
  Noninvasive Cancer Classification Using Diverse Genomic Features in Circulating Tumor DNA. BCB 2016: 516
• 
  Matthias Lienhard, Lukas Chavez:
  Quantitative Comparison of Large-Scale DNA Enrichment Sequencing Data. Statistical Genomics 2016: 191-208
• 2015
• 
  Florian Massip:
  The statistical fate of genomic DNA: modelling match statistics in different evolutionary scenarios. Paris-Sud University, France, 2015
• 
  Bo W. Han, Wei Wang, Phillip D. Zamore, Zhiping Weng:
  piPipes: a set of pipelines for piRNA and transposon analysis via small RNA-seq, RNA-seq, degradome- and CAGE-seq, ChIP-seq and genomic DNA sequencing. Bioinform. 31(4): 593-595 (2015)
• 
  Perambur S. Neelakanta, Sharmistha Chatterjee, Mirjana Pavlovic:
  A cohesive analysis of DNA/RNA sequences via entropy, energetics and spectral-domain methods to assess genomic features across single viral diversity. Int. J. Bioinform. Res. Appl. 11(4): 281-307 (2015)
• 2014
• 
  Fumiya Shida, Satoshi Mizuta:
  Measurement of word frequencies in genomic DNA sequences based on partial alignment and fuzzy set. J. Bioinform. Comput. Biol. 12(4) (2014)
• 
  Dimitris Polychronopoulos, Anastasia Krithara, Christoforos Nikolaou, Georgios Paliouras, Yannis Almirantis, George Giannakopoulos:
  Analysis and Classification of Constrained DNA Elements with N-gram Graphs and Genomic Signatures. AlCoB 2014: 220-234
• 
  Maxim Ivanov, Magnus Ingelman-Sundberg, Mart Kals, Lili Milani:
  Targeted profiling of 5-(hydroxy)methylcytosine in genomic DNA from human livers: Next-generation sequencing of target enriched DNA reveals unexpectedly high interindividual variability of cytosine methylation and hydroxymethylation. BIBM 2014: 6
• 
  Pokkuluri Kiran Sree, Inampudi Ramesh Babu:
  Identification of Protein Coding Regions in Genomic DNA Using Unsupervised FMACA Based Pattern Classifier. CoRR abs/1401.6484 (2014)
• 2013
• 
  Daniel Jost:
  Twist-DNA: computing base-pair and bubble opening probabilities in genomic superhelical DNA. Bioinform. 29(19): 2479-2481 (2013)
• 
  Manal Kalkatawi, Farania Rangkuti, Michael Schramm, Boris R. Jankovic, Allan Kamau, Rajesh Chowdhary, John A. C. Archer, Vladimir B. Bajic:
  Dragon PolyA Spotter: predictor of poly(A) motifs within human genomic DNA sequences. Bioinform. 29(11): 1484 (2013)
• 
  Tianyin Zhou, Lin Yang, Yan Lu, Iris Dror, Ana Carolina Dantas Machado, Tahereh Ghane, Rosa Di Felice, Remo Rohs:
  DNAshape: a method for the high-throughput prediction of DNA structural features on a genomic scale. Nucleic Acids Res. 41(Webserver-Issue): 56-62 (2013)
• 
  Hurmat Ali Shah, Laiq Hasan, Nasir Ahmad:
  An optimized and low-cost FPGA-based DNA sequence alignment - A step towards personal genomics. EMBC 2013: 2696-2699
• 
  Takahiro Kenmotsu, Naoki Ogawa, Rinko Kubota, Kenji Yoshida, Yukihiro Kagawa, Yoshiaki Watanabe, Yuko Yoshikawa, Kenichi Yoshikawa:
  Double-strand breaks on a genomic DNA caused by ultrasound: Evaluation by single DNA observation. MHS 2013: 1-3
• 2012
• 
  Manal Kalkatawi, Farania Rangkuti, Michael Schramm, Boris R. Jankovic, Allan Kamau, Rajesh Chowdhary, John A. C. Archer, Vladimir B. Bajic:
  Dragon PolyA Spotter: predictor of poly(A) motifs within human genomic DNA sequences. Bioinform. 28(1): 127-129 (2012)
• 
  Yuichi Kodama, Jun Mashima, Eli Kaminuma, Takashi Gojobori, Osamu Ogasawara, Toshihisa Takagi, Kousaku Okubo, Yasukazu Nakamura:
  The DNA Data Bank of Japan launches a new resource, the DDBJ Omics Archive of functional genomics experiments. Nucleic Acids Res. 40(Database-Issue): 38-42 (2012)
• 
  Sylvia A. Vetrone, Michael C. Huarng, Evangelyn C. Alocilja:
  Detection of Non-PCR Amplified S. enteritidis Genomic DNA from Food Matrices Using a Gold-Nanoparticle DNA Biosensor: A Proof-of-Concept Study. Sensors 12(8): 10487-10499 (2012)
• 
  Paul Dan Cristea, Rodica Tuduce:
  Use of nucleotide genomic signals to determine distances between mitochondrial DNA genes of mammals. ISCCSP 2012: 1-4

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