2019 export record
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journals/bmcbi/WangWZKSZB19 share record
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Chao Wang , Yi Wei , Haicang Zhang , Lupeng Kong , Shiwei Sun , Wei-Mou Zheng , Dongbo Bu : Constructing effective energy functions for protein structure prediction through broadening attraction-basin and reverse Monte Carlo sampling. BMC Bioinform. 20-S (3 ) : 99-108 (2019 )share record
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Wei Zheng , Chengxin Zhang , Eric W. Bell , Yang Zhang : I-TASSER gateway: A protein structure and function prediction server powered by XSEDE. Future Gener. Comput. Syst. 99 : 73-85 (2019 )share record
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Xinxiang Wang , Sheng-You Huang : Integrating Bonded and Nonbonded Potentials in the Knowledge-Based Scoring Function for Protein Structure Prediction. J. Chem. Inf. Model. 59 (6 ) : 3080-3090 (2019 )share record
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Amaninder Singh Gill , Joshua D. Summers , Chiradeep Sen : Impact of Chaining Method and Level of Completion on Accuracy of Function Structure-Based Market Price Prediction Models. J. Comput. Inf. Sci. Eng. 19 (4 ) (2019 )export record
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journals/nar/McGuffinAMSBNP19 share record
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Liam J. McGuffin , Recep Adiyaman , Ali H. A. Maghrabi , Ahmad N. Shuid , Danielle A. Brackenridge , John O. Nealon , Limcy S. Philomina : IntFOLD: an integrated web resource for high performance protein structure and function prediction. Nucleic Acids Res. 47 (Webserver-Issue ) : W408-W413 (2019 )2018 share record
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Shuangbao Song , Junkai Ji , Xingqian Chen , Shangce Gao , Zheng Tang , Yuki Todo : Adoption of an improved PSO to explore a compound multi-objective energy function in protein structure prediction. Appl. Soft Comput. 72 : 539-551 (2018 )export record
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journals/netmahib/SaeedHAA18 share record
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Noor AlHuda Ali A. H. Saeed , Israa Hussein Hamzah , Alaa Naseer Mohammed Ali , Abdulwahab Ali Abuderman : Prediction of single nucleotide polymorphisms (SNPs) in apolipoprotein E gene and their possible associations with a deleterious effect on the structure and functional properties: an in silico approach. Netw. Model. Anal. Health Informatics Bioinform. 7 (1 ) : 16 (2018 )share record
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Christian Klos , Daniel Miner , Jochen Triesch : Bridging structure and function: A model of sequence learning and prediction in primary visual cortex. PLoS Comput. Biol. 14 (6 ) (2018 )2017 share record
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Amaninder Singh Gill , Joshua D. Summers , Cameron J. Turner : Comparing function structures and pruned function structures for market price prediction: An approach to benchmarking representation inferencing value. Artif. Intell. Eng. Des. Anal. Manuf. 31 (4 ) : 550-566 (2017 )share record
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Chengxin Zhang , Peter L. Freddolino , Yang Zhang : COFACTOR: improved protein function prediction by combining structure, sequence and protein-protein interaction information. Nucleic Acids Res. 45 (Webserver-Issue ) : W291-W299 (2017 )share record
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Gregorio Kappaun Rocha , Jaqueline S. Angelo , Karina B. Santos , Fábio L. Custódio , Laurent Emmanuel Dardenne , Helio J. C. Barbosa : Using an aggregation tree to arrange energy function terms for protein structure prediction. CIBCB 2017 : 1-7 share record
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Sandhya Parasnath Dubey , N. Gopalakrishna Kini , S. Balaji , M. Sathish Kumar : Protein structure prediction on 2D square HP lattice with revised fitness function. ICACCI 2017 : 1732-1736 share record
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Or Litany , Tal Remez , Emanuele Rodolà , Alexander M. Bronstein , Michael M. Bronstein : Deep Functional Maps: Structured Prediction for Dense Shape Correspondence. ICCV 2017 : 5660-5668 share record
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Alessio Martino , Enrico Maiorino , Alessandro Giuliani , Mauro Giampieri , Antonello Rizzi : Supervised Approaches for Function Prediction of Proteins Contact Networks from Topological Structure Information. SCIA (1) 2017 : 285-296 export record
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journals/corr/LitanyRRBB17 share record
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Or Litany , Tal Remez , Emanuele Rodolà , Alexander M. Bronstein , Michael M. Bronstein : Deep Functional Maps: Structured Prediction for Dense Shape Correspondence. CoRR abs/1704.08686 (2017 )2016 export record
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journals/bioinformatics/FarrelMG16 share record
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Alvin Farrel , Jonathan Murphy , Jun-tao Guo : Structure-based prediction of transcription factor binding specificity using an integrative energy function. Bioinform. 32 (12 ) : 306-313 (2016 )share record
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Md. Tamjidul Hoque , Yuedong Yang , Avdesh Mishra , Yaoqi Zhou : sDFIRE: Sequence-specific statistical energy function for protein structure prediction by decoy selections. J. Comput. Chem. 37 (12 ) : 1119-1124 (2016 )share record
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R. Shamima , Suresh Sundaram : Prediction of membrane protein structures using a Projection based Meta-cognitive Radial Basis Function Network. IJCNN 2016 : 1229-1235 share record
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Ivan Escobar , Nicolas Hidalgo , Mario Inostroza-Ponta , Mauricio Marín , Erika Rosas , Márcio Dorn : Evaluation of a combined energy fitness function for a distributed memetic algorithm to tackle the 3D protein structure prediction problem. SCCC 2016 : 1-10 2015 export record
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journals/jcisd/KooistraLEG15 share record
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Albert J. Kooistra , Rob Leurs , Iwan J. P. de Esch , Chris de Graaf : Structure-Based Prediction of G-Protein-Coupled Receptor Ligand Function: A β-Adrenoceptor Case Study. J. Chem. Inf. Model. 55 (5 ) : 1045-1061 (2015 )share record
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Jianyi Yang , Yang Zhang : I-TASSER server: new development for protein structure and function predictions. Nucleic Acids Res. 43 (Webserver-Issue ) : W174-W181 (2015 )export record
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conf/ibpria/Nourani-VataniL15 share record
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Navid Nourani-Vatani , Roberto Javier López-Sastre , Stefan B. Williams : Structured Output Prediction with Hierarchical Loss Functions for Seafloor Imagery Taxonomic Categorization. IbPRIA 2015 : 173-183 export record
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conf/iccv/HajimirsadeghiM15 share record
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Hossein Hajimirsadeghi , Greg Mori : Learning Ensembles of Potential Functions for Structured Prediction with Latent Variables. ICCV 2015 : 4059-4067 2014 export record
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journals/bioinformatics/JiangCFR14 share record
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Yuxiang Jiang , Wyatt T. Clark , Iddo Friedberg , Predrag Radivojac : The impact of incomplete knowledge on the evaluation of protein function prediction: a structured-output learning perspective. Bioinform. 30 (17 ) : 609-616 (2014 )share record
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Anshuman Dixit , Gennady Verkhivker : Structure-Functional Prediction and Analysis of Cancer Mutation Effects in Protein Kinases. Comput. Math. Methods Medicine 2014 : 653487:1-653487:24 (2014 )export record
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journals/jcb/MaghawryMG14 share record
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Huda Amin Maghawry , Mostafa G. M. Mostafa , Tarek F. Gharib : A New Protein Structure Representation for Efficient Protein Function Prediction. J. Comput. Biol. 21 (12 ) : 936-946 (2014 )share record
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Amarda Shehu , Kenneth A. De Jong : Evolutionary search algorithms for protein modeling: from de novo structure prediction to comprehensive maps of functionally-relevant structures of protein chains and assemblies. GECCO (Companion) 2014 : 839-856 2013 export record
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journals/bmcbi/ErdinVLL13 share record
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Serkan Erdin , Eric Venner , Andreas Martin Lisewski , Olivier Lichtarge : Function prediction from networks of local evolutionary similarity in protein structure. BMC Bioinform. 14 (S-3 ) : S6 (2013 )export record
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journals/bmcbi/KapadiaR13 share record
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Chiraag D. Kapadia , Claire A. Rinehart : Ab Initio prediction of mycobacteriophages protein structure and function. BMC Bioinform. 14 (S-17 ) : A10 (2013 )export record
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journals/jcst/Garza-FabreRP13 share record
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Mario Garza-Fabre , Eduardo Rodriguez-Tello , Gregorio Toscano Pulido : Comparative Analysis of Different Evaluation Functions for Protein Structure Prediction Under the HP Model. J. Comput. Sci. Technol. 28 (5 ) : 868-889 (2013 )