- 2018
- S. M. Ashiqul Islam, Benjamin J. Heil, Christopher Michel Kearney, Erich J. Baker:
Protein classification using modified n-grams and skip-grams. Bioinform. 34(9): 1481-1487 (2018) - Chris I. Baker, Marcel van Gerven:
New advances in encoding and decoding of brain signals. NeuroImage 180(Part): 1-3 (2018) - B. B. Bankson, Martin N. Hebart, Iris I. A. Groen, Chris I. Baker:
The temporal evolution of conceptual object representations revealed through models of behavior, semantics and deep neural networks. NeuroImage 178: 172-182 (2018) - Martin N. Hebart, Chris I. Baker:
Deconstructing multivariate decoding for the study of brain function. NeuroImage 180(Part): 4-18 (2018) - Cibu Thomas, Neda Sadeghi, Amritha Nayak, Aaron Trefler, Joelle E. Sarlls, Chris I. Baker, Carlo Pierpaoli:
Impact of time-of-day on diffusivity measures of brain tissue derived from diffusion tensor imaging. NeuroImage 173: 25-34 (2018) - Salvatore Torrisi, Gang Chen, Daniel R. Glen, Peter A. Bandettini, Chris I. Baker, Richard C. Reynolds, Jeffrey Yen-Ting Liu, Joseph Leshin, Nicholas L. Balderston, Christian Grillon, Monique Ernst:
Statistical power comparisons at 3T and 7T with a GO / NOGO task. NeuroImage 175: 100-110 (2018) - Peter Zeidman, Edward Harry Silson, Dietrich Samuel Schwarzkopf, Chris Ian Baker, William D. Penny:
Bayesian population receptive field modelling. NeuroImage 180(Part): 173-187 (2018) - 2017
- Jian Ma, Cameron P. Casey, Xueyun Zheng, Yehia M. Ibrahim, Christopher S. Wilkins, Ryan S. Renslow, Dennis G. Thomas, Samuel H. Payne, Matthew E. Monroe, Richard D. Smith, Justin G. Teeguarden, Erin S. Baker, Thomas O. Metz:
PIXiE: an algorithm for automated ion mobility arrival time extraction and collision cross section calculation using global data association. Bioinform. 33(17): 2715-2722 (2017) - Antony J. Williams, Christopher M. Grulke, Jeff Edwards, Andrew D. McEachran, Kamel Mansouri, Nancy C. Baker, Grace Patlewicz, Imran Shah, John Wambaugh, Richard S. Judson, Ann M. Richard:
The CompTox Chemistry Dashboard: a community data resource for environmental chemistry. J. Cheminformatics 9(1): 61:1-61:27 (2017) - Aaron Chevalier, Daniel-Adriano Silva, Gabriel J. Rocklin, Derrick R. Hicks, Renan Vergara, Patience Murapa, Steffen M. Bernard, Lu Zhang, Kwok-Ho Lam, Guorui Yao, Christopher D. Bahl, Shin-Ichiro Miyashita, Inna Goreshnik, James T. Fuller, Merika T. Koday, Cody M. Jenkins, Tom Colvin, Lauren P. Carter, Alan Bohn, Cassie M. Bryan, D. Alejandro Fernández-Velasco, Lance J. Stewart, Min Dong, Xuhui Huang, Rongsheng Jin, Ian A. Wilson, Deborah H. Fuller, David Baker:
Massively parallel de novo protein design for targeted therapeutics. Nat. 550(7674): 74-79 (2017) - Xin Jin, Kyri Baker, Steven Isley, Dane Christensen:
User-preference-driven model predictive control of residential building loads and battery storage for demand response. ACC 2017: 4147-4152 - S. M. Ashiqul Islam, Christopher Michel Kearney, Ankan Choudhury, Erich J. Baker:
Protein Classification using Modified N-Gram and Skip-Gram Models: Extended Abstract. BCB 2017: 586 - S. M. Ashiqul Islam, Christopher Michel Kearney, Erich J. Baker:
CSPred: A machine-learning-based compound model to identify the functional activities of biologically-stable toxins. BIBM 2017: 2254-2255 - Laura Douglas, Iliyan Zarov, Konstantinos Gourgoulias, Chris Lucas, Chris Hart, Adam Baker, Maneesh Sahani, Yura Perov, Saurabh Johri:
A Universal Marginalizer for Amortized Inference in Generative Models. CoRR abs/1711.00695 (2017) - 2016
- Joel Cutcher-Gershenfeld, Karen S. Baker, Nicholas Berente, Dorothy R. Carter, Leslie A. DeChurch, Courtney C. Flint, Gabriel Gershenfeld, Michael Haberman, John Leslie King, Christine R. Kirkpatrick, Eric Knight, Barbara Lawrence, Spenser Lewis, W. Christopher Lenhardt, Pablo Lopez, Matthew S. Mayernik, Charles McElroy, Barbara Mittleman, Victor Nichol, Mark Nolan, Namchul Shin, Cheryl A. Thompson, Susan J. Winter, Ilya Zaslavsky:
Build It, But Will They Come? A Geoscience Cyberinfrastructure Baseline Analysis. Data Sci. J. 15: 8 (2016) - Aaron Trefler, Neda Sadeghi, Adam G. Thomas, Carlo Pierpaoli, Chris I. Baker, Cibu Thomas:
Impact of time-of-day on brain morphometric measures derived from T1-weighted magnetic resonance imaging. NeuroImage 133: 41-52 (2016) - Mawethu P. Bilibana, Avril R. Williams, Candice Rassie, Christopher E. Sunday, Hlamulo R. Makelane, Lindsay Wilson, Nomaphelo Ntshongontshi, Abongile N. Jijana, Milua Masikini, Priscilla G. L. Baker, Emmanuel I. Iwuoha:
Electrochemical Aptatoxisensor Responses on Nanocomposites Containing Electro-Deposited Silver Nanoparticles on Poly(Propyleneimine) Dendrimer for the Detection of Microcystin-LR in Freshwater. Sensors 16(11): 1901 (2016) - June Abbas, Stacey Renee Baker, Samuel J. Huskey, Chris E. Weaver:
How I learned to love classical studies: Information representation design of the digital latin library. ASIST 2016: 1-10 - Dane Christensen, Steven Isley, Kyri Baker, Xin Jin, Patricia Aloise-Young, Rahul Kadavil, Siddharth Suryanarayanan:
Homeowner Preference Elicitation: A Multi-Method Comparison: Poster Abstract. BuildSys@SenSys 2016: 243-244 - 2015
- S. M. Ashiqul Islam, Tanvir Sajed, Christopher Kearney, Erich J. Baker:
PredSTP: a highly accurate SVM based model to predict sequential cystine stabilized peptides. BMC Bioinform. 16: 210:1-210:11 (2015) - Robert M. Cronin, Jacob P. VanHouten, Edward D. Siew, Svetlana K. Eden, Stephan D. Fihn, Christopher D. Nielson, Josh F. Peterson, Clifton R. Baker, T. Alp Ikizler, Theodore Speroff, Michael E. Matheny:
National Veterans Health Administration inpatient risk stratification models for hospital-acquired acute kidney injury. J. Am. Medical Informatics Assoc. 22(5): 1054-1071 (2015) - Mark G. Aartsen, Rasha U. Abbasi, Markus Ackermann, Jenni Adams, Juan Antonio Aguilar Sánchez, Markus Ahlers, David Altmann, Carlos A. Argüelles Delgado, Jan Auffenberg, Xinhua Bai, Michael F. Baker, Steven W. Barwick, Volker Baum, Ryan Bay, James J. Beatty, Julia K. Becker Tjus, Karl-Heinz Becker, Segev BenZvi, Patrick Berghaus, David Berley, Elisa Bernardini, Anna Bernhard, David Z. Besson, G. Binder, Daniel Bindig, Martin Bissok, Erik Blaufuss, Jan Blumenthal, David J. Boersma, Christian Bohm, Debanjan Bose, Sebastian Böser, Olga Botner, Lionel Brayeur, Hans-Peter Bretz, Anthony M. Brown, Ronald Bruijn, James Casey, Martin Casier, Dmitry Chirkin, Asen Christov, Brian John Christy, Ken Clark, Lew Classen, Fabian Clevermann, Stefan Coenders, Shirit Cohen, Doug F. Cowen, Angel H. Cruz Silva, Matthias Danninger, Jacob Daughhetee, James C. Davis, Melanie Day, Catherine De Clercq, Sam De Ridder, Paolo Desiati, Krijn D. de Vries, Meike de With, Tyce DeYoung, Juan Carlos Díaz-Vélez, Matthew Dunkman, Ryan Eagan, Benjamin Eberhardt, Björn Eichmann, Jonathan Eisch, Sebastian Euler, Paul A. Evenson, Oladipo O. Fadiran, Ali R. Fazely, Anatoli Fedynitch, Jacob Feintzeig, Tom Feusels, Kirill Filimonov, Chad Finley, Tobias Fischer-Wasels, Samuel Flis, Anna Franckowiak, Katharina Frantzen, Tomasz Fuchs, Thomas K. Gaisser, Joseph S. Gallagher, Lisa Marie Gerhardt, Laura E. Gladstone, Thorsten Glüsenkamp, Azriel Goldschmidt, Geraldina Golup, Javier G. González, Jordan A. Goodman, Dariusz Góra, Dylan T. Grandmont, Darren Grant, Pavel Gretskov, John C. Groh, Andreas Groß, Chang Hyon Ha, Abd Al Karim Haj Ismail, Patrick Hallen, Allan Hallgren, Francis Halzen, Kael D. Hanson, Dustin Hebecker, David Heereman, Dirk Heinen, Klaus Helbing, Robert Eugene Hellauer III, Stephanie Virginia Hickford, Gary C. Hill, Kara D. Hoffman, Ruth Hoffmann, Andreas Homeier, Kotoyo Hoshina, Feifei Huang, Warren Huelsnitz, Per Olof Hulth, Klas Hultqvist, Shahid Hussain, Aya Ishihara, Emanuel Jacobi, John E. Jacobsen, Kai Jagielski, George S. Japaridze, Kyle Jero, Ola Jlelati, Basho Kaminsky, Alexander Kappes, Timo Karg, Albrecht Karle, Matthew Kauer, John Lawrence Kelley, Joanna Kiryluk, J. Kläs, Spencer R. Klein, Jan-Hendrik Köhne, Georges Kohnen, Hermann Kolanoski, Lutz Köpke, Claudio Kopper, Sandro Kopper, D. Jason Koskinen, Marek Kowalski, Mark Krasberg, Anna Kriesten, Kai Michael Krings, Gösta Kroll, Jan Kunnen, Naoko Kurahashi, Takao Kuwabara, Mathieu L. M. Labare, Hagar Landsman, Michael James Larson, Mariola Lesiak-Bzdak, Martin Leuermann, Julia Leute, Jan Lünemann, Oscar A. Macías-Ramírez, James Madsen, Giuliano Maggi, Reina Maruyama, Keiichi Mase, Howard S. Matis, Frank McNally, Kevin James Meagher, Martin Merck, Gonzalo Merino Arévalo, Thomas Meures, Sandra Miarecki, Eike Middell, Natalie Milke, John Lester Miller, Lars Mohrmann, Teresa Montaruli, Robert M. Morse, Rolf Nahnhauer, Uwe Naumann, Hans Niederhausen, Sarah C. Nowicki, David R. Nygren, Anna Obertacke, Sirin Odrowski, Alex Olivas, Ahmad Omairat, Aongus Starbuck Ó Murchadha, Larissa Paul, Joshua A. Pepper, Carlos Pérez de los Heros, Carl Pfendner, Damian Pieloth, Elisa Pinat, Jonas Posselt, P. Buford Price, Gerald T. Przybylski, Melissa Quinnan, Leif Rädel, Ian Rae, Mohamed Rameez, Katherine Rawlins, Peter Christian Redl, René Reimann, Elisa Resconi, Wolfgang Rhode, Mathieu Ribordy, Michael Richman, Benedikt Riedel, J. P. Rodrigues, Carsten Rott, Tim Ruhe, Bakhtiyar Ruzybayev, Dirk Ryckbosch, Sabine M. Saba, Heinz-Georg Sander, Juan Marcos Santander, Subir Sarkar, Kai Schatto, Florian Scheriau, Torsten Schmidt, Martin Schmitz, Sebastian Schoenen, Sebastian Schöneberg, Arne Schönwald, Anne Schukraft, Lukas Schulte, David Schultz, Olaf Schulz, David Seckel, Yolanda Sestayo de la Cerra, Surujhdeo Seunarine, Rezo Shanidze, Chris Sheremata, Miles W. E. Smith, Dennis Soldin, Glenn M. Spiczak, Christian Spiering, Michael Stamatikos, Todor Stanev, Nick A. Stanisha, Alexander Stasik, Thorsten Stezelberger, Robert G. Stokstad, Achim Stößl, Erik A. Strahler, Rickard Ström, Nora Linn Strotjohann, Gregory W. Sullivan, Henric Taavola, Ignacio J. Taboada, Alessio Tamburro, Andreas Tepe, Samvel Ter-Antonyan, Gordana Tesic, Serap Tilav, Patrick A. Toale, Moriah Natasha Tobin, Simona Toscano, Maria Tselengidou, Elisabeth Unger, Marcel Usner, Sofia Vallecorsa, Nick van Eijndhoven, Arne Van Overloop, Jakob van Santen, Markus Vehring, Markus Voge, Matthias Vraeghe, Christian Walck, Tilo Waldenmaier, Marius Wallraff, Christopher N. Weaver, Mark T. Wellons, Christopher H. Wendt, Stefan Westerhoff, Nathan Whitehorn, Klaus Wiebe, Christopher Wiebusch, Dawn R. Williams, Henrike Wissing, Martin Wolf, Terri R. Wood, Kurt Woschnagg, Donglian Xu, Xianwu Xu, Juan Pablo Yáñez Garza, Gaurang B. Yodh, Shigeru Yoshida, Pavel Zarzhitsky, Jan Ziemann, Simon Zierke, Marcel Zoll:
The IceProd framework: Distributed data processing for the IceCube neutrino observatory. J. Parallel Distributed Comput. 75: 198-211 (2015) - Annelies Baeck, Dwight J. Kravitz, Chris I. Baker, Hans P. Op de Beeck:
Influence of lexical status and orthographic similarity on the multi-voxel response of the visual word form area. NeuroImage 111: 321-328 (2015) - Michael A. DeJesus, Chaitra Ambadipudi, Richard Baker, Christopher M. Sassetti, Thomas R. Ioerger:
TRANSIT - A Software Tool for Himar1 TnSeq Analysis. PLoS Comput. Biol. 11(10) (2015) - Gertrude Fomo, Tesfaye Waryo, Christopher E. Sunday, Abd A. Baleg, Priscilla G. L. Baker, Emmanuel I. Iwuoha:
Aptameric Recognition-Modulated Electroactivity of Poly(4-Styrenesolfonic Acid)-Doped Polyaniline Films for Single-Shot Detection of Tetrodotoxin. Sensors 15(9): 22547-22560 (2015) - Milua Masikini, Stephen N. Mailu, Abebaw Tsegaye, Njagi Njomo, Kerileng M. Molapo, Chinwe O. Ikpo, Christopher Edozie Sunday, Candice Rassie, Lindsay Wilson, Priscilla G. L. Baker, Emmanuel I. Iwuoha:
A Fumonisins Immunosensor Based on Polyanilino-Carbon Nanotubes Doped with Palladium Telluride Quantum Dots. Sensors 15(1): 529-546 (2015) - Christopher Edozie Sunday, Milua Masikini, Lindsay Wilson, Candice Rassie, Tesfaye Waryo, Priscilla G. L. Baker, Emmanuel I. Iwuoha:
Application on Gold Nanoparticles-Dotted 4-Nitrophenylazo Graphene in a Label-Free Impedimetric Deoxynivalenol Immunosensor. Sensors 15(2): 3854-3871 (2015) - Pavel Shamis, Manjunath Gorentla Venkata, M. Graham Lopez, Matthew B. Baker, Oscar R. Hernandez, Yossi Itigin, Mike Dubman, Gilad Shainer, Richard L. Graham, Liran Liss, Yiftah Shahar, Sreeram Potluri, Davide Rossetti, Donald Becker, Duncan Poole, Christopher Lamb, Sameer Kumar, Craig B. Stunkel, George Bosilca, Aurélien Bouteiller:
UCX: An Open Source Framework for HPC Network APIs and Beyond. Hot Interconnects 2015: 40-43 - 2014
- Michel Dumontier, Christopher J. O. Baker, Joachim Baran, Alison Callahan, Leonid L. Chepelev, Jose Cruz-Toledo, Nicholas R. Del Rio, Geraint Duck, Laura Inés Furlong, Nichealla Keath, Dana Klassen, Jamie P. McCusker, Núria Queralt-Rosinach, Matthias Samwald, Natalia Villanueva-Rosales, Mark D. Wilkinson, Robert Hoehndorf:
The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery. J. Biomed. Semant. 5: 14 (2014)