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Christian Jungreuthmayer , Jürgen Zanghellini : Designing optimal cell factories: integer programming couples elementary mode analysis with regulation. BMC Syst. Biol. 6 : 103 (2012 )share record
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Hye-Won Kang : A multiscale approximation in a heat shock response model of E. coli. BMC Syst. Biol. 6 : 143 (2012 )export record
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journals/bmcsb/KarelinaZDSAFD12 share record
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Tatiana A. Karelina , Kirill V. Zhudenkov , Oleg O. Demin , Dmitry V. Svetlichny , Balaji Agoram , David Fairman , Oleg V. Demin : Regulation of leukotriene and 5oxoETE synthesis and the effect of 5-lipoxygenase inhibitors: a mathematical modeling approach. BMC Syst. Biol. 6 : 141 (2012 )export record
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journals/bmcsb/KarlstadtFKRRH12 share record
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Anja Karlstädt , Daniela Fliegner , Georgios Kararigas , Hugo Sanchez Ruderisch , Vera Regitz-Zagrosek , Hermann-Georg Holzhütter : CardioNet: A human metabolic network suited for the study of cardiomyocyte metabolism. BMC Syst. Biol. 6 : 114 (2012 )export record
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Daniel Kaschek , Jens Timmer : A variational approach to parameter estimation in ordinary differential equations. BMC Syst. Biol. 6 : 99 (2012 )share record
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Edward Kent , Stefan Hoops , Pedro Mendes : Condor-COPASI: high-throughput computing for biochemical networks. BMC Syst. Biol. 6 : 91 (2012 )share record
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Man-Sun Kim , Jeong-Rae Kim , Dong San Kim , Arthur D. Lander , Kwang-Hyun Cho : Spatiotemporal network motif reveals the biological traits of developmental gene regulatory networks in Drosophila melanogaster. BMC Syst. Biol. 6 : 31 (2012 )export record
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Daniel C. Kirouac , Julio Saez-Rodriguez , Jennifer Swantek , John M. Burke , Douglas A. Lauffenburger , Peter K. Sorger : Creating and analyzing pathway and protein interaction compendia for modelling signal transduction networks. BMC Syst. Biol. 6 : 29 (2012 )export record
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Amornpan Klanchui , Chiraphan Khannapho , Atchara Phodee , Supapon Cheevadhanarak , Asawin Meechai : iAK692: A genome-scale metabolic model of Spirulina platensis C1. BMC Syst. Biol. 6 : 71 (2012 )export record
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Sabrina Kleessen , Zoran Nikoloski : Dynamic regulatory on/off minimization for biological systems under internal temporal perturbations. BMC Syst. Biol. 6 : 16 (2012 )share record
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Rachel S. Koh , Mary J. Dunlop : Modeling suggests that gene circuit architecture controls phenotypic variability in a bacterial persistence network. BMC Syst. Biol. 6 : 47 (2012 )export record
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Michal Kolár , Jörn Meier , Ville Mustonen , Michael Lässig , Johannes Berg : GraphAlignment: Bayesian pairwise alignment of biological networks. BMC Syst. Biol. 6 : 144 (2012 )export record
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Andreas Kremling , Katharina Pflüger-Grau , Max Chavarría , Jacek Puchalka , Vítor A. P. Martins dos Santos , Victor de Lorenzo : Modeling and analysis of flux distributions in the two branches of the phosphotransferase system in Pseudomonas putida. BMC Syst. Biol. 6 : 149 (2012 )export record
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Clemens Kreutz , Andreas Raue , Jens Timmer : Likelihood based observability analysis and confidence intervals for predictions of dynamic models. BMC Syst. Biol. 6 : 120 (2012 )export record
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journals/bmcsb/KumarKBCZSPCB12 share record
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Shyamesh Kumar , Dusan Kunec , Joram J. Buza , Hsin-I Chiang , Huaijun Zhou , Sugalesini Subramaniam , Ken Pendarvis , Hans H. Cheng , Shane C. Burgess : Nuclear Factor kappa B is central to Marek's Disease herpesvirus induced neoplastic transformation of CD30 expressing lymphocytes in-vivo. BMC Syst. Biol. 6 : 123 (2012 )export record
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Bettina M. Länger , Cristina Pou-Barreto , Carlos González-Alcón , Basilio Valladares , Bettina Wimmer , Néstor V. Torres : Modeling of leishmaniasis infection dynamics: novel application to the design of effective therapies. BMC Syst. Biol. 6 : 1 (2012 )share record
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Angelyn Lao , Vanessa Schmidt , Yvonne Schmitz , Thomas E. Willnow , Olaf Wolkenhauer : Multi-compartmental modeling of SORLA's influence on amyloidogenic processing in Alzheimer's disease. BMC Syst. Biol. 6 : 74 (2012 )export record
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journals/bmcsb/LebedevaYLMH12 share record
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Galina Lebedeva , Azusa Yamaguchi , Simon P. Langdon , Kenneth Macleod , David J. Harrison : A model of estrogen-related gene expression reveals non-linear effects in transcriptional response to tamoxifen. BMC Syst. Biol. 6 : 138 (2012 )export record
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journals/bmcsb/LeccaMFCP12 share record
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Paola Lecca , Daniele Morpurgo , Gianluca Fantaccini , Alessandro Casagrande , Corrado Priami : Inferring biochemical reaction pathways: the case of the gemcitabine pharmacokinetics. BMC Syst. Biol. 6 : 51 (2012 )export record
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journals/bmcsb/LeeBLKOJKLISCRK12 share record
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Hee Lee , Taejeong Bae , Ji-Hyun Lee , Dae Kim , Young Oh , Yeongjun Jang , Ji-Tea Kim , Jong Jun Lee , Alessio Innocenti , Claudiu T. Supuran , Luonan Chen , Kyoohyoung Rho , Sunghoon Kim : Rational drug repositioning guided by an integrated pharmacological network of protein, disease and drug. BMC Syst. Biol. 6 : 80 (2012 )export record
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Dave Lee , Kieran Smallbone , Warwick B. Dunn , Ettore Murabito , Catherine Winder , Douglas B. Kell , Pedro Mendes , Neil Swainston : Improving metabolic flux predictions using absolute gene expression data. BMC Syst. Biol. 6 : 73 (2012 )share record
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Wenting Li , Rui Wang , Linfu Bai , Zhangming Yan , Zhirong Sun : Cancer core modules identification through genomic and transcriptomic changes correlation detection at network level. BMC Syst. Biol. 6 : 64 (2012 )share record
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Min Li , Hanhui Zhang , Jianxin Wang , Yi Pan : A new essential protein discovery method based on the integration of protein-protein interaction and gene expression data. BMC Syst. Biol. 6 : 15 (2012 )share record
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Jinghang Liang , Jie Han : Stochastic Boolean networks: An efficient approach to modeling gene regulatory networks. BMC Syst. Biol. 6 : 113 (2012 )export record
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journals/bmcsb/LinCCOJH12 share record
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Chen-Ching Lin , Ya-Jen Chen , Cho-Yi Chen , Yen-Jen Oyang , Hsueh-Fen Juan , Hsuan-Cheng Huang : Crosstalk between transcription factors and microRNAs in human protein interaction network. BMC Syst. Biol. 6 : 18 (2012 )export record
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Jörg Linde , Peter Hortschansky , Eugen Fazius , Axel A. Brakhage , Reinhard Guthke , Hubertus Haas : Regulatory interactions for iron homeostasis in Aspergillus fumigatus inferred by a Systems Biology approach. BMC Syst. Biol. 6 : 6 (2012 )share record
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Yu Liu , Mehmet Koyutürk , Jill S. Barnholtz-Sloan , Mark R. Chance : Gene interaction enrichment and network analysis to identify dysregulated pathways and their interactions in complex diseases. BMC Syst. Biol. 6 : 65 (2012 )export record
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journals/bmcsb/LiuTWFHCPHLC12 share record
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Yushu Liu , Pei-Wen Tsai , Yong Wang , Tan-Chi Fan , Chia-Hung Hsieh , Margaret Dah-Tsyr Chang , Tun-Wen Pai , Chien-Fu Huang , Chung-Yu Lan , Hao-Teng Chang : Chemoattraction of macrophages by secretory molecules derived from cells expressing the signal peptide of eosinophil cationic protein. BMC Syst. Biol. 6 : 105 (2012 )export record
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Kenneth Lo , Adrian E. Raftery , Kenneth M. Dombek , Jun Zhu , Eric E. Schadt , Roger Eugene Bumgarner , Ka Yee Yeung : Integrating external biological knowledge in the construction of regulatory networks from time-series expression data. BMC Syst. Biol. 6 : 101 (2012 )export record
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Nicolás Loira , Thierry Dulermo , Jean-Marc Nicaud , David James Sherman : A genome-scale metabolic model of the lipid-accumulating yeast Yarrowia lipolytica. BMC Syst. Biol. 6 : 35 (2012 )