- Sinan Erten, Marzieh Ayati
, Yu Liu, Mark R. Chance, Mehmet Koyutürk
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Algorithms for detecting complementary SNPs within a region of interest that are associated with diseases. BCB 2012: 194-201 - 2010
- Valentin V. Suslov, Petr M. Ponomarenko, Vadim M. Efimov
, Ludmila K. Savinkova, Mikhail P. Ponomarenko
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:
Snps in the HIV-1 TATA Box and the Aids pandemic. J. Bioinform. Comput. Biol. 8(3): 607-625 (2010) - Andrea Calabria, Ettore Mosca
, Federica Viti
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SNPRanker: a tool for identification and scoring of SNPs associated to target genes. J. Integr. Bioinform. 7(3) (2010) - Scott F. Saccone, Raphael Bolze, Prasanth Thomas, Jiaxi Quan, Gaurang Mehta, Ewa Deelman, Jay A. Tischfield
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SPOT: a web-based tool for using biological databases to prioritize SNPs after a genome-wide association study. Nucleic Acids Res. 38(Web-Server-Issue): 201-209 (2010) - 2009
- William S. Bush, Guanhua Chen
, Eric Torstenson, Marylyn D. Ritchie:
LD-Spline: Mapping SNPs on genotyping platforms to genomic regions using patterns of linkage disequilibrium. BioData Min. 2: 7 (2009) - Kathryn E. Holt
, Yik Y. Teo, Heng Li
, Satheesh Nair
, Gordon Dougan, John Wain
, Julian Parkhill
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Detecting SNPs and estimating allele frequencies in clonal bacterial populations by sequencing pooled DNA. Bioinform. 25(16): 2074-2075 (2009) - Robert Lawrence, Aaron G. Day-Williams, Richard Mott
, John Broxholme, Lon R. Cardon, Eleftheria Zeggini
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GLIDERS - A web-based search engine for genome-wide linkage disequilibrium between HapMap SNPs. BMC Bioinform. 10: 367 (2009) - 2008
- Andrew D. Johnson, Robert E. Handsaker, Sara L. Pulit
, Marcia M. Nizzari, Christopher J. O'Donnell, Paul I. W. de Bakker:
SNAP: a web-based tool for identification and annotation of proxy SNPs using HapMap. Bioinform. 24(24): 2938-2939 (2008) - Daniel F. Schwarz, Oliver Hädicke, Jeanette Erdmann
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, Daniel Bayer, Steffen Möller
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SNPtoGO: characterizing SNPs by enriched GO terms. Bioinform. 24(1): 146-148 (2008) - 2007
- Young C. Song, Edward A. Kawas, Benjamin M. Good
, Mark D. Wilkinson
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DataBiNS: a BioMoby-based data-mining workflow for biological pathways and non-synonymous SNPs. Bioinform. 23(6): 780-782 (2007) - David F. Burke
, Catherine L. Worth
, Eva-Maria Priego
, Tammy M. K. Cheng, Luc J. Smink, John A. Todd
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Genome bioinformatic analysis of nonsynonymous SNPs. BMC Bioinform. 8 (2007) - Mark T. W. Ebbert, Wesley A. Beckstead, Timothy O'Connor, Mark J. Clement, David A. McClellan
:
Pharmacogenomics: analysing SNPs in the CYP2D6 gene using amino acid properties. Int. J. Bioinform. Res. Appl. 3(4): 471-479 (2007) - 2006
- Xavier Solé
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, Joan Valls
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SNPStats: a web tool for the analysis of association studies. Bioinform. 22(15): 1928-1929 (2006) - Peng Yue, Eugene Melamud, John Moult
:
SNPs3D: Candidate gene and SNP selection for association studies. BMC Bioinform. 7: 166 (2006) - Paul I. W. de Bakker, Robert R. Graham, David Altshuler, Brian E. Henderson, Christopher A. Haiman:
Transferability of Tag SNPs to Capture Common Genetic Variation in DNA Repair Genes Across Multiple Populations. Pacific Symposium on Biocomputing 2006: 478-486 - 2005
- Xiaojun Di, Hajime Matsuzaki, Teresa A. Webster, Earl Hubbell
, Guoying Liu, Shoulian Dong, Dan Bartell, Jing Huang, Richard Chiles, Geoffrey Yang, Mei-mei Shen, David Kulp
, Giulia C. Kennedy, Rui Mei, Keith W. Jones, Simon Cawley:
Dynamic model based algorithms for screening and genotyping over 100K SNPs on oligonucleotide microarrays. Bioinform. 21(9): 1958-1963 (2005) - Rachel Karchin
, Mark Diekhans
, Libusha Kelly, Daryl J. Thomas, Ursula Pieper
, Narayanan Eswar, David Haussler, Andrej Sali:
LS-SNP: large-scale annotation of coding non-synonymous SNPs based on multiple information sources. Bioinform. 21(12): 2814-2820 (2005) - Hong Xu
, Simon G. Gregory
, Elizabeth R. Hauser
, Judith E. Stenger, Margaret A. Pericak-Vance, Jeffery M. Vance
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SNPselector: a web tool for selecting SNPs for genetic association studies. Bioinform. 21(22): 4181-4186 (2005) - David Savage, Jacqueline Batley
, Timothy A. Erwin
, Erica Logan, Christopher G. Love, Geraldine A. C. Lim, Emmanuel Mongin, Gary Barker, German C. Spangenberg, David Edwards
:
SNPServer: a real-time SNP discovery tool. Nucleic Acids Res. 33(Web-Server-Issue): 493-495 (2005) - 2004
- Eugene Lin, Dennis Chen, Yuchi Hwang, Ashely Chang, Z. John Gu:
A Prediction Model for the Drug Efficacy of Interferon in CHC Patients Based on SNPs. CSB 2004: 658-659 - Justin J. Song, Eric Q. Li, Wei Hu, Steven Ge, Chunrong Lai, Yimin Zhang
, Xuegong Zhang, Wenguang Chen, Weimin Zheng:
Parallelization of Bayesian Network based SNPs Pattern Analysis and Performance Characterization on SMP/HT. ICPADS 2004: 315-322 - 2002
- Andrew G. Clark
, Emmanouil T. Dermitzakis, Stylianos E. Antonarakis:
Trisomic Phase Inference. Computational Methods for SNPs and Haplotype Inference 2002: 1-8 - E. A. Thompson, Nicola H. Chapman:
Haplotype Blocks in Small Populations. Computational Methods for SNPs and Haplotype Inference 2002: 74-83 - 2001
- Julia V. Ponomarenko, Tatyana I. Merkulova, Galina Orlova, Oleg N. Fokin, Elena Gorshkova, Mikhail P. Ponomarenko:
Mining SNPs for Associating Disease Penetration with Transcription Factor Binding Site Alterations. German Conference on Bioinformatics 2001: 112-117 - 2000
- C. A. M. Semple, S. W. Morris, David J. Porteous
, Kathryn L. Evans
:
In silico identification of transcripts and SNPs from a region of 4p linked with bipolar affective disorder. Bioinform. 16(8): 735-738 (2000)