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@article{DBLP:journals/isb/BogdanovDG03, author = {Yuri F. Bogdanov and Sergei Y. Dadashev and Tatiana M. Grishaeva}, title = {In silico search for functionally similar proteins involved in meiosis and recombination in evolutionarily distant organisms}, journal = {Silico Biol.}, volume = {3}, number = {1-2}, pages = {173--185}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00086}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/BogdanovDG03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/Carugo03, author = {Oliviero Carugo}, title = {Prediction of protein polypeptide fragments exposed to the solvent}, journal = {Silico Biol.}, volume = {3}, number = {4}, pages = {417--428}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00106}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/Carugo03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/ChenH03, author = {Ming Chen and Ralf Hofest{\"{a}}dt}, title = {Quantitative Petri net model of gene regulated metabolic networks in the cell}, journal = {Silico Biol.}, volume = {3}, number = {3}, pages = {347--365}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00101}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/ChenH03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/CreightonH03, author = {Chad Creighton and Samir Hanash}, title = {Expression of matrix metalloproteinase 9 (MMP-9/gelatinase {B)} in adenocarcinomas strongly correlated with expression of immune response genes}, journal = {Silico Biol.}, volume = {3}, number = {3}, pages = {301--311}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00097}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/CreightonH03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/Cuperlovic-CulfRNO03, author = {Miroslava Cuperlovic{-}Culf and Gilles A. Robichaud and Michel Nardini and Rodney Ouellette}, title = {Investigation of interaction between Pax5 isoforms and thioredoxin using de novo modelling methods}, journal = {Silico Biol.}, volume = {3}, number = {4}, pages = {453--469}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00109}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/Cuperlovic-CulfRNO03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/DanilovaLG03, author = {Ludmila V. Danilova and Vassily A. Lyubetsky and Mikhail S. Gelfand}, title = {An algorithm for identification of regulatory signals in unaligned {DNA} sequences, its testing and parallel implementation}, journal = {Silico Biol.}, volume = {3}, number = {1-2}, pages = {33--47}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00075}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/DanilovaLG03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/DasC03, author = {Soumita Das and Keya Chaudhuri}, title = {Identification of a unique {IAHP} (IcmF associated homologous proteins) cluster in Vibrio cholerae and other proteobacteria through in silico analysis}, journal = {Silico Biol.}, volume = {3}, number = {3}, pages = {287--300}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00096}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/DasC03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/FreierHL03, author = {Andreas Freier and Ralf Hofest{\"{a}}dt and Matthias Lange}, title = {{IIUDB:} An object-oriented system for modelling, integration and analysis of gene controlled metabolic networks}, journal = {Silico Biol.}, volume = {3}, number = {1-2}, pages = {215--227}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00090}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/FreierHL03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/FuellenSCL03, author = {Georg Fuellen and Michael Spitzer and Paul Cullen and Stefan Lorkowski}, title = {BLASTing proteomes, yielding phylogenies}, journal = {Silico Biol.}, volume = {3}, number = {3}, pages = {313--319}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00098}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/FuellenSCL03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/Galitsky03, author = {Boris A. Galitsky}, title = {Revealing the set of mutually correlated positions for the protein families of immunoglobulin fold}, journal = {Silico Biol.}, volume = {3}, number = {3}, pages = {241--264}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00093}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/Galitsky03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/GorbanZP03, author = {Alexander N. Gorban and Andrei Yu. Zinovyev and Tatyana G. Popova}, title = {Seven clusters in genomic triplet distributions}, journal = {Silico Biol.}, volume = {3}, number = {4}, pages = {471--482}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00110}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/GorbanZP03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/JanakiJ03, author = {Chintalapati Janaki and Rajendra R. Joshi}, title = {Accelerating comparative genomics using parallel computing}, journal = {Silico Biol.}, volume = {3}, number = {4}, pages = {429--440}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00107}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/JanakiJ03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/KalininaMSGR03, author = {Olga V. Kalinina and Vsevolod J. Makeev and Roman A. Sutormin and Mikhail S. Gelfand and Aleksandra B. Rakhmaninova}, title = {The channel in transporters is formed by residues that are rare in transmembrane helices}, journal = {Silico Biol.}, volume = {3}, number = {1-2}, pages = {197--204}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00088}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/KalininaMSGR03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/KazakovVGOO03, author = {Alexei E. Kazakov and Olga Vassieva and Mikhail S. Gelfand and Andrei Osterman and Ross A. Overbeek}, title = {Bioinformatics classification and functional analysis of PhoH homologs}, journal = {Silico Biol.}, volume = {3}, number = {1-2}, pages = {3--15}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00073}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/KazakovVGOO03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/KeckW03, author = {Hans{-}Peter Keck and Thomas Wetter}, title = {Functional classification of proteins using a nearest neighbour algorithm}, journal = {Silico Biol.}, volume = {3}, number = {3}, pages = {265--275}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00094}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/KeckW03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/Kel-MargoulisTKGHLW03, author = {Olga V. Kel{-}Margoulis and Dmitri Tchekmenev and Alexander E. Kel and Ellen G{\"{o}}{\ss}ling and Klaus Hornischer and Birgit Lewicki{-}Potapov and Edgar Wingender}, title = {Composition-sensitive analysis of the human genome for regulatory signals}, journal = {Silico Biol.}, volume = {3}, number = {1-2}, pages = {145--171}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00084}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/Kel-MargoulisTKGHLW03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/KolchanovH03, author = {Nikolay A. Kolchanov and Ralf Hofest{\"{a}}dt}, title = {The 3rd International Conference on Bioinformatics of Genome Regulation and Structure {(BGRS} 2002) - Preface}, journal = {Silico Biol.}, volume = {3}, number = {1-2}, pages = {1--2}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00072}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/KolchanovH03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/LevitskyK03, author = {Victor G. Levitsky and Alexey V. Katokhin}, title = {Recognition of eukaryotic promoters using a genetic algorithm based on iterative discriminant analysis}, journal = {Silico Biol.}, volume = {3}, number = {1-2}, pages = {81--87}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00079}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/LevitskyK03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/LockwoodF03, author = {Christopher R. Lockwood and Timothy M. Frayling}, title = {Combining genome and mouse knockout expression data to highlight binding sites for the transcription factor HNF1alpha}, journal = {Silico Biol.}, volume = {3}, number = {1-2}, pages = {57--70}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00077}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/LockwoodF03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/LyubetskyV03, author = {Vassily A. Lyubetsky and Vladimir V. V'yugin}, title = {Methods of horizontal gene transfer determination using phylogenetic data}, journal = {Silico Biol.}, volume = {3}, number = {1-2}, pages = {17--31}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00074}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/LyubetskyV03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/MatsunoTADMM03, author = {Hiroshi Matsuno and Yukiko Tanaka and Hitoshi Aoshima and Atsushi Doi and Mika Matsui and Satoru Miyano}, title = {Biopathways representation and simulation on hybrid functional Petri net}, journal = {Silico Biol.}, volume = {3}, number = {3}, pages = {389--404}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00103}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/MatsunoTADMM03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/NandiKR03, author = {Tannistha Nandi and Krishnamoorthy Kannan and Srinivasan Ramachandran}, title = {The low complexity proteins from enteric pathogenic bacteria: Taxonomic parallels embedded in diversity}, journal = {Silico Biol.}, volume = {3}, number = {3}, pages = {277--285}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00095}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/NandiKR03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/NizolenkoBNYG03, author = {Lily Ph. Nizolenko and Alexander G. Bachinsky and Andrey N. Naumochkin and Andrey A. Yarigin and Dmitry A. Grigorovich}, title = {Database of patterns PROF{\_}PAT, used to detect local similarities}, journal = {Silico Biol.}, volume = {3}, number = {1-2}, pages = {205--213}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00089}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/NizolenkoBNYG03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/PetrowskySB03, author = {Nikolai Petrovsky and Christian Sch{\"{o}}nbach and Vladimir Brusic}, title = {Bioinformatic strategies for better understanding of immune function}, journal = {Silico Biol.}, volume = {3}, number = {4}, pages = {411--416}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00105}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/PetrowskySB03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/PospisilHPR03, author = {Heike Pospisil and Alexander Herrmann and Harald Pankow and Jens G. Reich}, title = {A database on alternative splice forms on the Integrated Genetic Map Service {(IGMS)}}, journal = {Silico Biol.}, volume = {3}, number = {1-2}, pages = {229--234}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00091}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/PospisilHPR03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/SchwarzlHSF03, author = {Sonja M. Schwarzl and Danzhi Huang and Jeremy C. Smith and Stefan Fischer}, title = {How well does charge reparametrisation account for solvent screening in molecular mechanics calculations? The example of myosin}, journal = {Silico Biol.}, volume = {3}, number = {1-2}, pages = {187--196}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00087}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/SchwarzlHSF03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/ShelestKGW03, author = {Ekaterina Shelest and Alexander E. Kel and Ellen G{\"{o}}{\ss}ling and Edgar Wingender}, title = {Prediction of potential C/EBP/NF-kappaB composite elements using matrix-based search methods}, journal = {Silico Biol.}, volume = {3}, number = {1-2}, pages = {71--79}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00078}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/ShelestKGW03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/SmirnovaS03, author = {Olga G. Smirnova and Irina L. Stepanenko}, title = {Application of filter technology in Photomorphogenesis Gene Network}, journal = {Silico Biol.}, volume = {3}, number = {1-2}, pages = {117--125}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00082}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/SmirnovaS03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/SpirovH03, author = {Alexander V. Spirov and David M. Holloway}, title = {Making the body plan: Precision in the genetic hierarchy of Drosophila embryo segmentation}, journal = {Silico Biol.}, volume = {3}, number = {1-2}, pages = {89--100}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00080}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/SpirovH03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/StavrovskayaM03, author = {Elena D. Stavrovskaya and Andrey A. Mironov}, title = {Two genetic algorithms for identification of regulatory signals}, journal = {Silico Biol.}, volume = {3}, number = {1-2}, pages = {49--56}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00076}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/StavrovskayaM03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/TakaiJ03, author = {Daiya Takai and Peter A. Jones}, title = {The CpG Island Searcher: {A} new {WWW} resource}, journal = {Silico Biol.}, volume = {3}, number = {3}, pages = {235--240}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00092}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/TakaiJ03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/TchuraevG03, author = {Rustem N. Tchuraev and Alexander V. Galimzyanov}, title = {Parametric stability evaluation in computer experiments on the mathematical model of Drosophila control gene subnetwork}, journal = {Silico Biol.}, volume = {3}, number = {1-2}, pages = {101--115}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00081}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/TchuraevG03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/TechM03, author = {Maike Tech and Rainer Merkl}, title = {{YACOP:} Enhanced gene prediction obtained by a combination of existing methods}, journal = {Silico Biol.}, volume = {3}, number = {4}, pages = {441--451}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00108}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/TechM03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/VandenbogaertM03, author = {Mathias Vandenbogaert and Vsevolod J. Makeev}, title = {Analysis of bacterial RM-Systems through genome-scale analysis and related taxonomic issues}, journal = {Silico Biol.}, volume = {3}, number = {1-2}, pages = {127--143}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00083}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/VandenbogaertM03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/VossHK03, author = {Klaus Voss and Monika Heiner and Ina Koch}, title = {Steady state analysis of metabolic pathways using Petri nets}, journal = {Silico Biol.}, volume = {3}, number = {3}, pages = {367--387}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00102}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/VossHK03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/WiezerM03, author = {Arnim Wiezer and Rainer Merkl}, title = {secureBLAST}, journal = {Silico Biol.}, volume = {3}, number = {4}, pages = {405--409}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00104}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/WiezerM03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/Zevedei-OanceaS03, author = {Ionela Zevedei{-}Oancea and Stefan Schuster}, title = {Topological analysis of metabolic networks based on Petri net theory}, journal = {Silico Biol.}, volume = {3}, number = {3}, pages = {323--345}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00100}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/Zevedei-OanceaS03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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