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@inproceedings{DBLP:conf/recomb/BansalBEW07,
  author       = {Mukul S. Bansal and
                  J. Gordon Burleigh and
                  Oliver Eulenstein and
                  Andr{\'{e}} Wehe},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Heuristics for the Gene-Duplication Problem: {A} \emph{Theta} {(}
                  \emph{n} {)} Speed-Up for the Local Search},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {238--252},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_17},
  doi          = {10.1007/978-3-540-71681-5\_17},
  timestamp    = {Mon, 13 May 2019 09:30:09 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/BansalBEW07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/Ben-DorLTRBBWBY07,
  author       = {Amir Ben{-}Dor and
                  Doron Lipson and
                  Anya Tsalenko and
                  Mark Reimers and
                  Lars O. Baumbusch and
                  Michael T. Barrett and
                  John N. Weinstein and
                  Anne{-}Lise B{\o}rresen{-}Dale and
                  Zohar Yakhini},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Framework for Identifying Common Aberrations in {DNA} Copy Number
                  Data},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {122--136},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_9},
  doi          = {10.1007/978-3-540-71681-5\_9},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/Ben-DorLTRBBWBY07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/BernG07,
  author       = {Marshall W. Bern and
                  David Goldberg},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Improved Ranking Functions for Protein and Modification-Site Identifications},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {444--458},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_31},
  doi          = {10.1007/978-3-540-71681-5\_31},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/BernG07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/BernardVH07,
  author       = {Allister Bernard and
                  David S. Vaughn and
                  Alexander J. Hartemink},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Reconstructing the Topology of Protein Complexes},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {32--46},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_3},
  doi          = {10.1007/978-3-540-71681-5\_3},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/BernardVH07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/CoronaRE07,
  author       = {Erik Corona and
                  Benjamin J. Raphael and
                  Eleazar Eskin},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Identification of Deletion Polymorphisms from Haplotypes},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {354--365},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_25},
  doi          = {10.1007/978-3-540-71681-5\_25},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/CoronaRE07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/DostSGRBS07,
  author       = {Banu Dost and
                  Tomer Shlomi and
                  Nitin Gupta and
                  Eytan Ruppin and
                  Vineet Bafna and
                  Roded Sharan},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {QNet: {A} Tool for Querying Protein Interaction Networks},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {1--15},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_1},
  doi          = {10.1007/978-3-540-71681-5\_1},
  timestamp    = {Sun, 25 Oct 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/DostSGRBS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/GargXMM07,
  author       = {Abhishek Garg and
                  Ioannis Xenarios and
                  Luis Mendoza and
                  Giovanni De Micheli},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {An Efficient Method for Dynamic Analysis of Gene Regulatory Networks
                  and \emph{in silico} Gene Perturbation Experiments},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {62--76},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_5},
  doi          = {10.1007/978-3-540-71681-5\_5},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/GargXMM07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/GrochowK07,
  author       = {Joshua A. Grochow and
                  Manolis Kellis},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Network Motif Discovery Using Subgraph Enumeration and Symmetry-Breaking},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {92--106},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_7},
  doi          = {10.1007/978-3-540-71681-5\_7},
  timestamp    = {Sun, 02 Jun 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/GrochowK07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/HarmonAHWCSR07,
  author       = {Cyrus L. Harmon and
                  Parvez Ahammad and
                  Ann Hammonds and
                  Richard Weiszmann and
                  Susan E. Celniker and
                  Shankar Sastry and
                  Gerald M. Rubin},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Comparative Analysis of Spatial Patterns of Gene Expression in \emph{Drosophila
                  melanogaster} Imaginal Discs},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {533--547},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_37},
  doi          = {10.1007/978-3-540-71681-5\_37},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/HarmonAHWCSR07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/HusonK07,
  author       = {Daniel H. Huson and
                  Tobias H. Kl{\"{o}}pper},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Beyond Galled Trees - Decomposition and Computation of Galled Networks},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {211--225},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_15},
  doi          = {10.1007/978-3-540-71681-5\_15},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/HusonK07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/InbarSDNW07,
  author       = {Yuval Inbar and
                  Dina Schneidman{-}Duhovny and
                  Oranit Dror and
                  Ruth Nussinov and
                  Haim J. Wolfson},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Deterministic Pharmacophore Detection Via Multiple Flexible Alignment
                  of Drug-Like Molecules},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {412--429},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_29},
  doi          = {10.1007/978-3-540-71681-5\_29},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/InbarSDNW07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/KamisettyXL07,
  author       = {Hetunandan Kamisetty and
                  Eric P. Xing and
                  Christopher James Langmead},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Free Energy Estimates of All-Atom Protein Structures Using Generalized
                  Belief Propagation},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {366--380},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_26},
  doi          = {10.1007/978-3-540-71681-5\_26},
  timestamp    = {Wed, 19 May 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/KamisettyXL07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/KannanEF07,
  author       = {Anitha Kannan and
                  Andrew Emili and
                  Brendan J. Frey},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {A Bayesian Model That Links Microarray mRNA Measurements to Mass Spectrometry
                  Protein Measurements},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {325--338},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_23},
  doi          = {10.1007/978-3-540-71681-5\_23},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/KannanEF07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/KlammerYMN07,
  author       = {Aaron A. Klammer and
                  Xianhua Yi and
                  Michael J. MacCoss and
                  William Stafford Noble},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Peptide Retention Time Prediction Yields Improved Tandem Mass Spectrum
                  Identification for Diverse Chromatography Conditions},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {459--472},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_32},
  doi          = {10.1007/978-3-540-71681-5\_32},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/KlammerYMN07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/KuwaharaM07,
  author       = {Hiroyuki Kuwahara and
                  Chris J. Myers},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Production-Passage-Time Approximation: {A} New Approximation Method
                  to Accelerate the Simulation Process of Enzymatic Reactions},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {166--180},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_12},
  doi          = {10.1007/978-3-540-71681-5\_12},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/KuwaharaM07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/LeeS07,
  author       = {Wah{-}Heng Lee and
                  Wing{-}Kin Sung},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {RB-Finder: An Improved Distance-Based Sliding Window Method to Detect
                  Recombination Breakpoints},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {518--532},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_36},
  doi          = {10.1007/978-3-540-71681-5\_36},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/LeeS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/LuS07,
  author       = {Yue Lu and
                  Sing{-}Hoi Sze},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Multiple Sequence Alignment Based on Profile Alignment of Intermediate
                  Sequences},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {283--295},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_20},
  doi          = {10.1007/978-3-540-71681-5\_20},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/LuS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/MuraliR07,
  author       = {T. M. Murali and
                  Corban G. Rivera},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Network Legos: Building Blocks of Cellular Wiring Diagrams},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {47--61},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_4},
  doi          = {10.1007/978-3-540-71681-5\_4},
  timestamp    = {Thu, 18 Jul 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/MuraliR07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/NarlikarGH07,
  author       = {Leelavati Narlikar and
                  Raluca Gord{\^{a}}n and
                  Alexander J. Hartemink},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Nucleosome Occupancy Information Improves \emph{de novo} Motif Discovery},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {107--121},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_8},
  doi          = {10.1007/978-3-540-71681-5\_8},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/NarlikarGH07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/NighamH07,
  author       = {Anshul Nigham and
                  David Hsu},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Protein Conformational Flexibility Analysis with Noisy Data},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {396--411},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_28},
  doi          = {10.1007/978-3-540-71681-5\_28},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/NighamH07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/ORourkeZJE07,
  author       = {Sean O'Rourke and
                  Noah Zaitlen and
                  Nebojsa Jojic and
                  Eleazar Eskin},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Reconstructing the Phylogeny of Mobile Elements},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {196--210},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_14},
  doi          = {10.1007/978-3-540-71681-5\_14},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/ORourkeZJE07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/Ozery-FlatoS07,
  author       = {Michal Ozery{-}Flato and
                  Ron Shamir},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Rearrangements in Genomes with Centromeres Part {I:} Translocations},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {339--353},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_24},
  doi          = {10.1007/978-3-540-71681-5\_24},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/Ozery-FlatoS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/PhilippakisQBB07,
  author       = {Anthony A. Philippakis and
                  Aaron M. Qureshi and
                  Michael F. Berger and
                  Martha L. Bulyk},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Design of Compact, Universal {DNA} Microarrays for Protein Binding
                  Microarray Experiments},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {430--443},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_30},
  doi          = {10.1007/978-3-540-71681-5\_30},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/PhilippakisQBB07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/Piccolboni07,
  author       = {Antonio Piccolboni},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Multivariate Segmentation in the Analysis of Transcription Tiling
                  Array Data},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {311--324},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_22},
  doi          = {10.1007/978-3-540-71681-5\_22},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/Piccolboni07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/PradinesDRF07,
  author       = {Jo{\"{e}}l R. Pradines and
                  Vlado Danc{\'{\i}}k and
                  Alan Ruttenberg and
                  Victor Farutin},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Connectedness Profiles in Protein Networks for the Analysis of Gene
                  Expression Data},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {296--310},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_21},
  doi          = {10.1007/978-3-540-71681-5\_21},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/PradinesDRF07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/Schulz-TrieglaffHGHR07,
  author       = {Ole Schulz{-}Trieglaff and
                  Rene Hussong and
                  Clemens Gr{\"{o}}pl and
                  Andreas Hildebrandt and
                  Knut Reinert},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {A Fast and Accurate Algorithm for the Quantification of Peptides from
                  Mass Spectrometry Data},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {473--487},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_33},
  doi          = {10.1007/978-3-540-71681-5\_33},
  timestamp    = {Sun, 12 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/recomb/Schulz-TrieglaffHGHR07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/SharonS07,
  author       = {Eilon Sharon and
                  Eran Segal},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {A Feature-Based Approach to Modeling Protein-DNA Interactions},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {77--91},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_6},
  doi          = {10.1007/978-3-540-71681-5\_6},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/SharonS07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/ShiGWX07,
  author       = {Yanxin Shi and
                  Fan Guo and
                  Wei Wu and
                  Eric P. Xing},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {GIMscan: {A} New Statistical Method for Analyzing Whole-Genome Array
                  {CGH} Data},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {151--165},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_11},
  doi          = {10.1007/978-3-540-71681-5\_11},
  timestamp    = {Mon, 25 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/ShiGWX07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/SinghXB07,
  author       = {Rohit Singh and
                  Jinbo Xu and
                  Bonnie Berger},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Pairwise Global Alignment of Protein Interaction Networks by Matching
                  Neighborhood Topology},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {16--31},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_2},
  doi          = {10.1007/978-3-540-71681-5\_2},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/SinghXB07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/SridharRH07,
  author       = {Srinath Sridhar and
                  Satish Rao and
                  Eran Halperin},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {An Efficient and Accurate Graph-Based Approach to Detect Population
                  Substructure},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {503--517},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_35},
  doi          = {10.1007/978-3-540-71681-5\_35},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/SridharRH07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/TangTTA07,
  author       = {Xinyu Tang and
                  Shawna L. Thomas and
                  Lydia Tapia and
                  Nancy M. Amato},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Tools for Simulating and Analyzing {RNA} Folding Kinetics},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {268--282},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_19},
  doi          = {10.1007/978-3-540-71681-5\_19},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/TangTTA07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/WangCMPCI07,
  author       = {Wenyi Wang and
                  Benilton S. Carvalho and
                  Nate Miller and
                  Jonathan Pevsner and
                  Aravinda Chakravarti and
                  Rafael A. Irizarry},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Estimating Genome-Wide Copy Number Using Allele Specific Mixture Models},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {137--150},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_10},
  doi          = {10.1007/978-3-540-71681-5\_10},
  timestamp    = {Fri, 26 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/recomb/WangCMPCI07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/WexlerG07,
  author       = {Ydo Wexler and
                  Dan Geiger},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Variational Upper Bounds for Probabilistic Phylogenetic Models},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {226--237},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_16},
  doi          = {10.1007/978-3-540-71681-5\_16},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/WexlerG07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/Wu07,
  author       = {Yufeng Wu},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Association Mapping of Complex Diseases with Ancestral Recombination
                  Graphs: Models and Efficient Algorithms},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {488--502},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_34},
  doi          = {10.1007/978-3-540-71681-5\_34},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/Wu07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/YanoverSW07,
  author       = {Chen Yanover and
                  Ora Schueler{-}Furman and
                  Yair Weiss},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Minimizing and Learning Energy Functions for Side-Chain Prediction},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {381--395},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_27},
  doi          = {10.1007/978-3-540-71681-5\_27},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/YanoverSW07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/YuJEP07,
  author       = {Chun{-}Nam John Yu and
                  Thorsten Joachims and
                  Ron Elber and
                  Jaroslaw Pillardy},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Support Vector Training of Protein Alignment Models},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {253--267},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_18},
  doi          = {10.1007/978-3-540-71681-5\_18},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/YuJEP07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/ZaitlenRHJ07,
  author       = {Noah Zaitlen and
                  Manuel Reyes{-}Gomez and
                  David Heckerman and
                  Nebojsa Jojic},
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Shift-Invariant Adaptive Double Threading: Learning {MHC} {II} - Peptide
                  Binding},
  booktitle    = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  pages        = {181--195},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5\_13},
  doi          = {10.1007/978-3-540-71681-5\_13},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/ZaitlenRHJ07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@proceedings{DBLP:conf/recomb/2007,
  editor       = {Terence P. Speed and
                  Haiyan Huang},
  title        = {Research in Computational Molecular Biology, 11th Annual International
                  Conference, {RECOMB} 2007, Oakland, CA, USA, April 21-25, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4453},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-71681-5},
  doi          = {10.1007/978-3-540-71681-5},
  isbn         = {3-540-71680-7},
  timestamp    = {Mon, 13 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/2007.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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