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@article{DBLP:journals/bmcbi/AbeMMNS20,
author = {Ko Abe and
Kodai Minoura and
Yuka Maeda and
Hiroyoshi Nishikawa and
Teppei Shimamura},
title = {Model-based clustering for flow and mass cytometry data with clinical
information},
journal = {{BMC} Bioinform.},
volume = {21-S},
number = {13},
pages = {393},
year = {2020},
url = {https://doi.org/10.1186/s12859-020-03671-7},
doi = {10.1186/S12859-020-03671-7},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/AbeMMNS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AcharyaCP20,
author = {Sudipta Acharya and
Laizhong Cui and
Yi Pan},
title = {A consensus multi-view multi-objective gene selection approach for
improved sample classification},
journal = {{BMC} Bioinform.},
volume = {21-S},
number = {13},
pages = {386},
year = {2020},
url = {https://doi.org/10.1186/s12859-020-03681-5},
doi = {10.1186/S12859-020-03681-5},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/AcharyaCP20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AhmedQBA20,
author = {Nauman Ahmed and
Tong Dong Qiu and
Koen Bertels and
Zaid Al{-}Ars},
title = {{GPU} acceleration of Darwin read overlapper for de novo assembly
of long {DNA} reads},
journal = {{BMC} Bioinform.},
volume = {21-S},
number = {13},
pages = {388},
year = {2020},
url = {https://doi.org/10.1186/s12859-020-03685-1},
doi = {10.1186/S12859-020-03685-1},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AhmedQBA20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AlbrechtBH20,
author = {Benjamin Albrecht and
Caner Bagci and
Daniel H. Huson},
title = {{MAIRA-} real-time taxonomic and functional analysis of long reads
on a laptop},
journal = {{BMC} Bioinform.},
volume = {21-S},
number = {13},
pages = {390},
year = {2020},
url = {https://doi.org/10.1186/s12859-020-03684-2},
doi = {10.1186/S12859-020-03684-2},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/AlbrechtBH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenCJ20,
author = {Xiaoyang Chen and
Shengquan Chen and
Rui Jiang},
title = {EnClaSC: a novel ensemble approach for accurate and robust cell-type
classification of single-cell transcriptomes},
journal = {{BMC} Bioinform.},
volume = {21-S},
number = {13},
pages = {392},
year = {2020},
url = {https://doi.org/10.1186/s12859-020-03679-z},
doi = {10.1186/S12859-020-03679-Z},
timestamp = {Thu, 29 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenCJ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LeeCKKPK20,
author = {Sangwoo Lee and
Eun Kyung Choe and
So Yeon Kim and
Hua Sun Kim and
Kyu Joo Park and
Dokyoon Kim},
title = {Liver imaging features by convolutional neural network to predict
the metachronous liver metastasis in stage {I-III} colorectal cancer
patients based on preoperative abdominal {CT} scan},
journal = {{BMC} Bioinform.},
volume = {21-S},
number = {13},
pages = {382},
year = {2020},
url = {https://doi.org/10.1186/s12859-020-03686-0},
doi = {10.1186/S12859-020-03686-0},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LeeCKKPK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiZYBX20,
author = {Ke Li and
Sijia Zhang and
Di Yan and
Yannan Bin and
Junfeng Xia},
title = {Prediction of hot spots in protein-DNA binding interfaces based on
supervised isometric feature mapping and extreme gradient boosting},
journal = {{BMC} Bioinform.},
volume = {21-S},
number = {13},
pages = {381},
year = {2020},
url = {https://doi.org/10.1186/s12859-020-03683-3},
doi = {10.1186/S12859-020-03683-3},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiZYBX20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LinHSCCCHLCCHTS20,
author = {Yang{-}Chi{-}Dung Lin and
Hsi{-}Yuan Huang and
Sirjana Shrestha and
Chih{-}Hung Chou and
Yen{-}Hua Chen and
Chi{-}Ru Chen and
Hsiao{-}Chin Hong and
Jing Li and
Yi{-}An Chang and
Men{-}Yee Chiew and
Ya{-}Rong Huang and
Siang{-}Jyun Tu and
Ting{-}Hsuan Sun and
Shun{-}Long Weng and
Ching{-}Ping Tseng and
Hsien{-}Da Huang},
title = {Multi-omics profiling reveals microRNA-mediated insulin signaling
networks},
journal = {{BMC} Bioinform.},
volume = {21-S},
number = {13},
pages = {389},
year = {2020},
url = {https://doi.org/10.1186/s12859-020-03678-0},
doi = {10.1186/S12859-020-03678-0},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LinHSCCCHLCCHTS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuMCL20,
author = {Jinling Liu and
Xiaojun Ma and
Gregory F. Cooper and
Xinghua Lu},
title = {Explicit representation of protein activity states significantly improves
causal discovery of protein phosphorylation networks},
journal = {{BMC} Bioinform.},
volume = {21-S},
number = {13},
pages = {379},
year = {2020},
url = {https://doi.org/10.1186/s12859-020-03676-2},
doi = {10.1186/S12859-020-03676-2},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuMCL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LuZTSWZLZGX20,
author = {Yongchun L{\"{u}} and
Xiangrui Zeng and
Xinhui Tian and
Xiao Shi and
Hui Wang and
Xiaohui Zheng and
Xiaodong Liu and
Xiaofang Zhao and
Xin Gao and
Min Xu},
title = {Spark-based parallel calculation of 3D fourier shell correlation for
macromolecule structure local resolution estimation},
journal = {{BMC} Bioinform.},
volume = {21-S},
number = {13},
pages = {391},
year = {2020},
url = {https://doi.org/10.1186/s12859-020-03680-6},
doi = {10.1186/S12859-020-03680-6},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LuZTSWZLZGX20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PanZG20,
author = {Yuliang Pan and
Shuigeng Zhou and
Jihong Guan},
title = {Computationally identifying hot spots in protein-DNA binding interfaces
using an ensemble approach},
journal = {{BMC} Bioinform.},
volume = {21-S},
number = {13},
pages = {384},
year = {2020},
url = {https://doi.org/10.1186/s12859-020-03675-3},
doi = {10.1186/S12859-020-03675-3},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/PanZG20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PengLS20,
author = {Jiajie Peng and
Jingyi Li and
Xuequn Shang},
title = {A learning-based method for drug-target interaction prediction based
on feature representation learning and deep neural network},
journal = {{BMC} Bioinform.},
volume = {21-S},
number = {13},
pages = {394},
year = {2020},
url = {https://doi.org/10.1186/s12859-020-03677-1},
doi = {10.1186/S12859-020-03677-1},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/PengLS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangLDLYZ20,
author = {Jian Wang and
Mengying Li and
Qishuai Diao and
Hongfei Lin and
Zhihao Yang and
Yi{-}Jia Zhang},
title = {Biomedical document triage using a hierarchical attention-based capsule
network},
journal = {{BMC} Bioinform.},
volume = {21-S},
number = {13},
pages = {380},
year = {2020},
url = {https://doi.org/10.1186/s12859-020-03673-5},
doi = {10.1186/S12859-020-03673-5},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WangLDLYZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YouRLLXZCZ20,
author = {Yujie You and
Xufang Ru and
Wanjing Lei and
Tingting Li and
Ming Xiao and
Huiru Zheng and
Yujie Chen and
Le Zhang},
title = {Developing the novel bioinformatics algorithms to systematically investigate
the connections among survival time, key genes and proteins for Glioblastoma
multiforme},
journal = {{BMC} Bioinform.},
volume = {21-S},
number = {13},
pages = {383},
year = {2020},
url = {https://doi.org/10.1186/s12859-020-03674-4},
doi = {10.1186/S12859-020-03674-4},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YouRLLXZCZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhongLHGLWSH20,
author = {Yuanke Zhong and
Jing Li and
Junhao He and
Yiqun Gao and
Jie Liu and
Jingru Wang and
Xuequn Shang and
Jialu Hu},
title = {Twadn: an efficient alignment algorithm based on time warping for
pairwise dynamic networks},
journal = {{BMC} Bioinform.},
volume = {21-S},
number = {13},
pages = {385},
year = {2020},
url = {https://doi.org/10.1186/s12859-020-03672-6},
doi = {10.1186/S12859-020-03672-6},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhongLHGLWSH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhouLLXZL20,
author = {Renyi Zhou and
Zhangli Lu and
Huimin Luo and
Ju Xiang and
Min Zeng and
Min Li},
title = {{NEDD:} a network embedding based method for predicting drug-disease
associations},
journal = {{BMC} Bioinform.},
volume = {21-S},
number = {13},
pages = {387},
year = {2020},
url = {https://doi.org/10.1186/s12859-020-03682-4},
doi = {10.1186/S12859-020-03682-4},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhouLLXZL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/AhmadAAH20,
author = {Tanveer Ahmad and
Nauman Ahmed and
Zaid Al{-}Ars and
H. Peter Hofstee},
title = {Optimizing performance of {GATK} workflows using Apache Arrow In-Memory
data framework},
journal = {{BMC} Genom.},
volume = {21},
number = {{S-10}},
year = {2020},
url = {https://doi.org/10.1186/s12864-020-07013-y},
doi = {10.1186/S12864-020-07013-Y},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/AhmadAAH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/BriandDELL20,
author = {Samuel Briand and
Christophe Dessimoz and
Nadia El{-}Mabrouk and
Manuel Lafond and
Gabriela Lobinska},
title = {A generalized Robinson-Foulds distance for labeled trees},
journal = {{BMC} Genom.},
volume = {21},
number = {{S-10}},
year = {2020},
url = {https://doi.org/10.1186/s12864-020-07011-0},
doi = {10.1186/S12864-020-07011-0},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/BriandDELL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ChoiKJJ20,
author = {Ju Hun Choi and
Taegun Kim and
Junghyun Jung and
Jong Wha J. Joo},
title = {Fully automated web-based tool for identifying regulatory hotspots},
journal = {{BMC} Genom.},
volume = {21},
number = {{S-10}},
year = {2020},
url = {https://doi.org/10.1186/s12864-020-07012-z},
doi = {10.1186/S12864-020-07012-Z},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ChoiKJJ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/FengCWL20,
author = {Xikang Feng and
Lingxi Chen and
Zishuai Wang and
Shuai Cheng Li},
title = {I-Impute: a self-consistent method to impute single cell {RNA} sequencing
data},
journal = {{BMC} Genom.},
volume = {21},
number = {{S-10}},
year = {2020},
url = {https://doi.org/10.1186/s12864-020-07007-w},
doi = {10.1186/S12864-020-07007-W},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcgenomics/FengCWL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/JeonT20,
author = {Ah{-}Jung Jeon and
Greg Tucker{-}Kellogg},
title = {Bivalent genes that undergo transcriptional switching identify networks
of key regulators of embryonic stem cell differentiation},
journal = {{BMC} Genom.},
volume = {21},
number = {{S-10}},
year = {2020},
url = {https://doi.org/10.1186/s12864-020-07009-8},
doi = {10.1186/S12864-020-07009-8},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcgenomics/JeonT20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/LiGCL20,
author = {Huiran Li and
Yin Guo and
Menglan Cai and
Limin Li},
title = {MicroRNA-disease association prediction by matrix tri-factorization},
journal = {{BMC} Genom.},
volume = {21},
number = {{S-10}},
year = {2020},
url = {https://doi.org/10.1186/s12864-020-07006-x},
doi = {10.1186/S12864-020-07006-X},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/LiGCL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/LiuWXLDZZZWL20,
author = {Jiaqi Liu and
Jiayin Wang and
Xiao Xiao and
Xin Lai and
Daocheng Dai and
Xuanping Zhang and
Xiaoyan Zhu and
Zhongmeng Zhao and
Juan Wang and
Zhimin Li},
title = {A hybrid correcting method considering heterozygous variations by
a comprehensive probabilistic model},
journal = {{BMC} Genom.},
volume = {21},
number = {{S-10}},
year = {2020},
url = {https://doi.org/10.1186/s12864-020-07008-9},
doi = {10.1186/S12864-020-07008-9},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/LiuWXLDZZZWL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/WangJYQ20,
author = {Yijie Wang and
Hyundoo Jeong and
Byung{-}Jun Yoon and
Xiaoning Qian},
title = {ClusterM: a scalable algorithm for computational prediction of conserved
protein complexes across multiple protein interaction networks},
journal = {{BMC} Genom.},
volume = {21},
number = {{S-10}},
year = {2020},
url = {https://doi.org/10.1186/s12864-020-07010-1},
doi = {10.1186/S12864-020-07010-1},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/WangJYQ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/WuLWSWZLZXNL20,
author = {Xueting Wu and
Xuetong Li and
Wei Wang and
Yuanhong Shan and
Cuiting Wang and
Mulan Zhu and
Qiong La and
Yang Zhong and
Ye Xu and
Peng Nan and
Xuan Li},
title = {Integrated metabolomics and transcriptomics study of traditional herb
Astragalus membranaceus Bge. var. mongolicus (Bge.) Hsiao reveals
global metabolic profile and novel phytochemical ingredients},
journal = {{BMC} Genom.},
volume = {21},
number = {{S-10}},
year = {2020},
url = {https://doi.org/10.1186/s12864-020-07005-y},
doi = {10.1186/S12864-020-07005-Y},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/WuLWSWZLZXNL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenZ19,
author = {Quan Chen and
Jun Zhu},
title = {Detecting virus-specific effects on post-infection temporal gene expression},
journal = {{BMC} Bioinform.},
volume = {20-S},
number = {3},
pages = {109--118},
year = {2019},
url = {https://doi.org/10.1186/s12859-019-2653-4},
doi = {10.1186/S12859-019-2653-4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenZ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JammaliAKO19,
author = {Safa Jammali and
Jean{-}David Aguilar and
Esaie Kuitche and
A{\"{\i}}da Ouangraoua},
title = {SplicedFamAlign: CDS-to-gene spliced alignment and identification
of transcript orthology groups},
journal = {{BMC} Bioinform.},
volume = {20-S},
number = {3},
pages = {37--52},
year = {2019},
url = {https://doi.org/10.1186/s12859-019-2647-2},
doi = {10.1186/S12859-019-2647-2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JammaliAKO19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KawaguchiKIS19,
author = {Risa Kawaguchi and
Hisanori Kiryu and
Junichi Iwakiri and
Jun Sese},
title = {reactIDR: evaluation of the statistical reproducibility of high-throughput
structural analyses towards a robust {RNA} structure prediction},
journal = {{BMC} Bioinform.},
volume = {20-S},
number = {3},
pages = {15--24},
year = {2019},
url = {https://doi.org/10.1186/s12859-019-2645-4},
doi = {10.1186/S12859-019-2645-4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KawaguchiKIS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LegendreAT19,
author = {Audrey Legendre and
Eric Angel and
Fariza Tahi},
title = {RCPred: {RNA} complex prediction as a constrained maximum weight clique
problem},
journal = {{BMC} Bioinform.},
volume = {20-S},
number = {3},
pages = {53--62},
year = {2019},
url = {https://doi.org/10.1186/s12859-019-2648-1},
doi = {10.1186/S12859-019-2648-1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LegendreAT19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LeiFGW19,
author = {Xiujuan Lei and
Ming Fang and
Ling Guo and
Fang{-}Xiang Wu},
title = {Protein complex detection based on flower pollination mechanism in
multi-relation reconstructed dynamic protein networks},
journal = {{BMC} Bioinform.},
volume = {20-S},
number = {3},
pages = {63--74},
year = {2019},
url = {https://doi.org/10.1186/s12859-019-2649-0},
doi = {10.1186/S12859-019-2649-0},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LeiFGW19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiZSLZLWJFL019,
author = {Ran Li and
Xiangrui Zeng and
Stephanie E. Sigmund and
Ruogu Lin and
Bo Zhou and
Chang Liu and
Kaiwen Wang and
Rui Jiang and
Zachary Freyberg and
Hairong Lv and
Min Xu},
title = {Automatic localization and identification of mitochondria in cellular
electron cryo-tomography using faster-RCNN},
journal = {{BMC} Bioinform.},
volume = {20-S},
number = {3},
pages = {75--85},
year = {2019},
url = {https://doi.org/10.1186/s12859-019-2650-7},
doi = {10.1186/S12859-019-2650-7},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LiZSLZLWJFL019.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RyuKYLJ19,
author = {Jayoung Ryu and
Hyun{-}Woong Kim and
Dongchan Yang and
Andrew J. Lee and
Inkyung Jung},
title = {A new class of constitutively active super-enhancers is associated
with fast recovery of 3D chromatin loops},
journal = {{BMC} Bioinform.},
volume = {20-S},
number = {3},
pages = {25--36},
year = {2019},
url = {https://doi.org/10.1186/s12859-019-2646-3},
doi = {10.1186/S12859-019-2646-3},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/RyuKYLJ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ShanWH19,
author = {Nayang Shan and
Zuoheng Wang and
Lin Hou},
title = {Identification of trans-eQTLs using mediation analysis with multiple
mediators},
journal = {{BMC} Bioinform.},
volume = {20-S},
number = {3},
pages = {87--97},
year = {2019},
url = {https://doi.org/10.1186/s12859-019-2651-6},
doi = {10.1186/S12859-019-2651-6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ShanWH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangWZKSZB19,
author = {Chao Wang and
Yi Wei and
Haicang Zhang and
Lupeng Kong and
Shiwei Sun and
Wei{-}Mou Zheng and
Dongbo Bu},
title = {Constructing effective energy functions for protein structure prediction
through broadening attraction-basin and reverse Monte Carlo sampling},
journal = {{BMC} Bioinform.},
volume = {20-S},
number = {3},
pages = {99--108},
year = {2019},
url = {https://doi.org/10.1186/s12859-019-2652-5},
doi = {10.1186/S12859-019-2652-5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WangWZKSZB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/AbeHOS19,
author = {Ko Abe and
Masaaki Hirayama and
Kinji Ohno and
Teppei Shimamura},
title = {{ENIGMA:} an enterotype-like unigram mixture model for microbial association
analysis},
journal = {{BMC} Genom.},
volume = {20},
number = {{S2}},
year = {2019},
url = {https://doi.org/10.1186/s12864-019-5476-9},
doi = {10.1186/S12864-019-5476-9},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/AbeHOS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/AiLPCCX19,
author = {Dongmei Ai and
Xiaoxin Li and
Hongfei Pan and
Jiamin Chen and
Jacob A. Cram and
Li C. Xia},
title = {Explore mediated co-varying dynamics in microbial community using
integrated local similarity and liquid association analysis},
journal = {{BMC} Genom.},
volume = {20},
number = {{S2}},
year = {2019},
url = {https://doi.org/10.1186/s12864-019-5469-8},
doi = {10.1186/S12864-019-5469-8},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcgenomics/AiLPCCX19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/AnMW19,
author = {Shaokun An and
Liang Ma and
Lin Wan},
title = {{TSEE:} an elastic embedding method to visualize the dynamic gene
expression patterns of time series single-cell {RNA} sequencing data},
journal = {{BMC} Genom.},
volume = {20},
number = {{S2}},
year = {2019},
url = {https://doi.org/10.1186/s12864-019-5477-8},
doi = {10.1186/S12864-019-5477-8},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/AnMW19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/BiswasL19,
author = {Bipasa Biswas and
Yinglei Lai},
title = {A distance-type measure approach to the analysis of copy number variation
in {DNA} sequencing data},
journal = {{BMC} Genom.},
volume = {20},
number = {{S2}},
year = {2019},
url = {https://doi.org/10.1186/s12864-019-5491-x},
doi = {10.1186/S12864-019-5491-X},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/BiswasL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/DuCS19,
author = {Nan Du and
Jiao Chen and
Yanni Sun},
title = {Improving the sensitivity of long read overlap detection using grouped
short k-mer matches},
journal = {{BMC} Genom.},
volume = {20},
number = {{S2}},
year = {2019},
url = {https://doi.org/10.1186/s12864-019-5475-x},
doi = {10.1186/S12864-019-5475-X},
timestamp = {Wed, 16 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/DuCS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/Guzman-SaenzHBP19,
author = {Aldo Guzm{\'{a}}n{-}S{\'{a}}enz and
Niina Haiminen and
Saugata Basu and
Laxmi Parida},
title = {Signal enrichment with strain-level resolution in metagenomes using
topological data analysis},
journal = {{BMC} Genom.},
volume = {20},
number = {{S2}},
year = {2019},
url = {https://doi.org/10.1186/s12864-019-5490-y},
doi = {10.1186/S12864-019-5490-Y},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/Guzman-SaenzHBP19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/HuaZ19,
author = {Kui Hua and
Xuegong Zhang},
title = {Estimating the total genome length of a metagenomic sample using k-mers},
journal = {{BMC} Genom.},
volume = {20},
number = {{S2}},
year = {2019},
url = {https://doi.org/10.1186/s12864-019-5467-x},
doi = {10.1186/S12864-019-5467-X},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/HuaZ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ParkKSHHLCK19,
author = {Sungjoon Park and
Minsu Kim and
Seokjun Seo and
Seungwan Hong and
Kyoohyung Han and
Keewoo Lee and
Jung Hee Cheon and
Sun Kim},
title = {A secure {SNP} panel scheme using homomorphically encrypted K-mers
without {SNP} calling on the user side},
journal = {{BMC} Genom.},
volume = {20},
number = {{S2}},
year = {2019},
url = {https://doi.org/10.1186/s12864-019-5473-z},
doi = {10.1186/S12864-019-5473-Z},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ParkKSHHLCK19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/QianMYLLH19,
author = {Wenhao Qian and
Ting Ma and
Mao Ye and
Zhiyao Li and
Yuanhua Liu and
Pei Hao},
title = {Microbiota in the apical root canal system of tooth with apical periodontitis},
journal = {{BMC} Genom.},
volume = {20},
number = {{S2}},
year = {2019},
url = {https://doi.org/10.1186/s12864-019-5474-y},
doi = {10.1186/S12864-019-5474-Y},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/QianMYLLH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/RenABA19,
author = {Shanshan Ren and
Nauman Ahmed and
Koen Bertels and
Zaid Al{-}Ars},
title = {{GPU} accelerated sequence alignment with traceback for {GATK} HaplotypeCaller},
journal = {{BMC} Genom.},
volume = {20},
number = {{S2}},
year = {2019},
url = {https://doi.org/10.1186/s12864-019-5468-9},
doi = {10.1186/S12864-019-5468-9},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/RenABA19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/TianZTFYF19,
author = {Qi Tian and
Jianxiao Zou and
Jianxiong Tang and
Yuan Fang and
Zhongli Yu and
Shicai Fan},
title = {{MRCNN:} a deep learning model for regression of genome-wide {DNA}
methylation},
journal = {{BMC} Genom.},
volume = {20},
number = {{S2}},
year = {2019},
url = {https://doi.org/10.1186/s12864-019-5488-5},
doi = {10.1186/S12864-019-5488-5},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/TianZTFYF19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/YangYCN19,
author = {Pengshuo Yang and
Shaojun Yu and
Lin Cheng and
Kang Ning},
title = {Meta-network: optimized species-species network analysis for microbial
communities},
journal = {{BMC} Genom.},
volume = {20},
number = {{S2}},
year = {2019},
url = {https://doi.org/10.1186/s12864-019-5471-1},
doi = {10.1186/S12864-019-5471-1},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/YangYCN19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/YinWLLJ19,
author = {Qijin Yin and
Mengmeng Wu and
Qiao Liu and
Hairong Lv and
Rui Jiang},
title = {DeepHistone: a deep learning approach to predicting histone modifications},
journal = {{BMC} Genom.},
volume = {20},
number = {{S2}},
year = {2019},
url = {https://doi.org/10.1186/s12864-019-5489-4},
doi = {10.1186/S12864-019-5489-4},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcgenomics/YinWLLJ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ZhangGZGZ19,
author = {Xia Zhang and
Yanglan Gan and
Guobing Zou and
Jihong Guan and
Shuigeng Zhou},
title = {Genome-wide analysis of epigenetic dynamics across human developmental
stages and tissues},
journal = {{BMC} Genom.},
volume = {20},
number = {{S2}},
year = {2019},
url = {https://doi.org/10.1186/s12864-019-5472-0},
doi = {10.1186/S12864-019-5472-0},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ZhangGZGZ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ZhangLLNL19,
author = {Yanlin Zhang and
Weiwei Liu and
Yu Lin and
Yen Kaow Ng and
Shuaicheng Li},
title = {Large-scale 3D chromatin reconstruction from chromosomal contacts},
journal = {{BMC} Genom.},
volume = {20},
number = {{S2}},
year = {2019},
url = {https://doi.org/10.1186/s12864-019-5470-2},
doi = {10.1186/S12864-019-5470-2},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ZhangLLNL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/DuttaMASZ19,
author = {Pritha Dutta and
Lichun Ma and
Yusuf Ali and
Peter M. A. Sloot and
Jie Zheng},
title = {Boolean network modeling of {\(\beta\)}-cell apoptosis and insulin
resistance in type 2 diabetes mellitus},
journal = {{BMC} Syst. Biol.},
volume = {13-S},
number = {2},
pages = {36:1--36:12},
year = {2019},
url = {https://doi.org/10.1186/s12918-019-0692-0},
doi = {10.1186/S12918-019-0692-0},
timestamp = {Thu, 02 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcsb/DuttaMASZ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/HaoDKBHTKFWSHK19,
author = {Yangyang Hao and
Quan{-}Yang Duh and
Richard T. Kloos and
Joshua Babiarz and
R. Mack Harrell and
S. Thomas Traweek and
Su Yeon Kim and
Grazyna Fedorowicz and
P. Sean Walsh and
Peter M. Sadow and
Jing Huang and
Giulia C. Kennedy},
title = {Identification of H{\"{u}}rthle cell cancers: solving a clinical
challenge with genomic sequencing and a trio of machine learning algorithms},
journal = {{BMC} Syst. Biol.},
volume = {13-S},
number = {2},
pages = {27:1--27:14},
year = {2019},
url = {https://doi.org/10.1186/s12918-019-0693-z},
doi = {10.1186/S12918-019-0693-Z},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/HaoDKBHTKFWSHK19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/KCLCYH19,
author = {Kishan KC and
Rui Li and
Feng Cui and
Qi Yu and
Anne R. Haake},
title = {{GNE:} a deep learning framework for gene network inference by aggregating
biological information},
journal = {{BMC} Syst. Biol.},
volume = {13-S},
number = {2},
pages = {38:1--38:14},
year = {2019},
url = {https://doi.org/10.1186/s12918-019-0694-y},
doi = {10.1186/S12918-019-0694-Y},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/KCLCYH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/LiLGY19,
author = {Xiaoying Li and
Yaping Lin and
Changlong Gu and
Jialiang Yang},
title = {{FCMDAP:} using miRNA family and cluster information to improve the
prediction accuracy of disease related miRNAs},
journal = {{BMC} Syst. Biol.},
volume = {13-S},
number = {2},
pages = {26:1--26:16},
year = {2019},
url = {https://doi.org/10.1186/s12918-019-0696-9},
doi = {10.1186/S12918-019-0696-9},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/LiLGY19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/LiuLZCZDCLZR19,
author = {Lunfei Liu and
Wenting Liu and
Yuxin Zheng and
Jisu Chen and
Jiong Zhou and
Huatuo Dai and
Suiqing Cai and
Jianjun Liu and
Min Zheng and
Yunqing Ren},
title = {Anti-TNF- {\(\alpha\)}treatment-related pathways and biomarkers revealed
by transcriptome analysis in Chinese psoriasis patients},
journal = {{BMC} Syst. Biol.},
volume = {13-S},
number = {2},
pages = {29:1--29:9},
year = {2019},
url = {https://doi.org/10.1186/s12918-019-0698-7},
doi = {10.1186/S12918-019-0698-7},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcsb/LiuLZCZDCLZR19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/LiuR19,
author = {Wenting Liu and
Jagath C. Rajapakse},
title = {Fusing gene expressions and transitive protein-protein interactions
for inference of gene regulatory networks},
journal = {{BMC} Syst. Biol.},
volume = {13-S},
number = {2},
pages = {37:1--37:13},
year = {2019},
url = {https://doi.org/10.1186/s12918-019-0695-x},
doi = {10.1186/S12918-019-0695-X},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/LiuR19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/SunCLS19,
author = {Shiquan Sun and
Yabo Chen and
Yang Liu and
Xuequn Shang},
title = {A fast and efficient count-based matrix factorization method for detecting
cell types from single-cell RNAseq data},
journal = {{BMC} Syst. Biol.},
volume = {13-S},
number = {2},
pages = {28:1--28:8},
year = {2019},
url = {https://doi.org/10.1186/s12918-019-0699-6},
doi = {10.1186/S12918-019-0699-6},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/SunCLS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/TabeiKSY19,
author = {Yasuo Tabei and
Masaaki Kotera and
Ryusuke Sawada and
Yoshihiro Yamanishi},
title = {Network-based characterization of drug-protein interaction signatures
with a space-efficient approach},
journal = {{BMC} Syst. Biol.},
volume = {13-S},
number = {2},
pages = {39:1--39:15},
year = {2019},
url = {https://doi.org/10.1186/s12918-019-0691-1},
doi = {10.1186/S12918-019-0691-1},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/TabeiKSY19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/XuePS19,
author = {Hansheng Xue and
Jiajie Peng and
Xuequn Shang},
title = {Predicting disease-related phenotypes using an integrated phenotype
similarity measurement based on {HPO}},
journal = {{BMC} Syst. Biol.},
volume = {13-S},
number = {2},
pages = {34:1--34:12},
year = {2019},
url = {https://doi.org/10.1186/s12918-019-0697-8},
doi = {10.1186/S12918-019-0697-8},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcsb/XuePS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/YeH19,
author = {Xiaoxin Ye and
Joshua Wing Kei Ho},
title = {Ultrafast clustering of single-cell flow cytometry data using FlowGrid},
journal = {{BMC} Syst. Biol.},
volume = {13-S},
number = {2},
pages = {35:1--35:8},
year = {2019},
url = {https://doi.org/10.1186/s12918-019-0690-2},
doi = {10.1186/S12918-019-0690-2},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/YeH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenKSCHLL18,
author = {Shu{-}Hwa Chen and
Wen{-}Yu Kuo and
Sheng{-}Yao Su and
Wei{-}Chun Chung and
Jen{-}Ming Ho and
Henry Horng{-}Shing Lu and
Chung{-}Yen Lin},
title = {A gene profiling deconvolution approach to estimating immune cell
composition from complex tissues},
journal = {{BMC} Bioinform.},
volume = {19-S},
number = {4},
pages = {15--23},
year = {2018},
url = {https://doi.org/10.1186/s12859-018-2069-6},
doi = {10.1186/S12859-018-2069-6},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenKSCHLL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GaoWDX18,
author = {Yujuan Gao and
Sheng Wang and
Minghua Deng and
Jinbo Xu},
title = {RaptorX-Angle: real-value prediction of protein backbone dihedral
angles through a hybrid method of clustering and deep learning},
journal = {{BMC} Bioinform.},
volume = {19-S},
number = {4},
pages = {73--84},
year = {2018},
url = {https://doi.org/10.1186/s12859-018-2065-x},
doi = {10.1186/S12859-018-2065-X},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GaoWDX18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GongJDL18,
author = {Xiaofeng Gong and
Jianping Jiang and
Zhongqu Duan and
Hui Lu},
title = {A new method to measure the semantic similarity from query phenotypic
abnormalities to diseases based on the human phenotype ontology},
journal = {{BMC} Bioinform.},
volume = {19-S},
number = {4},
pages = {111--119},
year = {2018},
url = {https://doi.org/10.1186/s12859-018-2064-y},
doi = {10.1186/S12859-018-2064-Y},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/GongJDL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HayashiMYOA18,
author = {Takanori Hayashi and
Yuri Matsuzaki and
Keisuke Yanagisawa and
Masahito Ohue and
Yutaka Akiyama},
title = {MEGADOCK-Web: an integrated database of high-throughput structure-based
protein-protein interaction predictions},
journal = {{BMC} Bioinform.},
volume = {19-S},
number = {4},
pages = {61--72},
year = {2018},
url = {https://doi.org/10.1186/s12859-018-2073-x},
doi = {10.1186/S12859-018-2073-X},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HayashiMYOA18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KimLCJP18,
author = {Yongkang Kim and
Sungyoung Lee and
Sungkyoung Choi and
Jin{-}Young Jang and
Taesung Park},
title = {Hierarchical structural component modeling of microRNA-mRNA integration
analysis},
journal = {{BMC} Bioinform.},
volume = {19-S},
number = {4},
pages = {25--34},
year = {2018},
url = {https://doi.org/10.1186/s12859-018-2070-0},
doi = {10.1186/S12859-018-2070-0},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/KimLCJP18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LeeKCHP18,
author = {Sungyoung Lee and
Yongkang Kim and
Sungkyoung Choi and
Heungsun Hwang and
Taesung Park},
title = {Pathway-based approach using hierarchical components of rare variants
to analyze multiple phenotypes},
journal = {{BMC} Bioinform.},
volume = {19-S},
number = {4},
pages = {85--97},
year = {2018},
url = {https://doi.org/10.1186/s12859-018-2066-9},
doi = {10.1186/S12859-018-2066-9},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LeeKCHP18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Taguchi18,
author = {Y{-}h. Taguchi},
title = {Tensor decomposition-based and principal-component-analysis-based
unsupervised feature extraction applied to the gene expression and
methylation profiles in the brains of social insects with multiple
castes},
journal = {{BMC} Bioinform.},
volume = {19-S},
number = {4},
pages = {99:1--99:13},
year = {2018},
url = {https://doi.org/10.1186/s12859-018-2068-7},
doi = {10.1186/S12859-018-2068-7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Taguchi18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TakenakaMSM18,
author = {Yoichi Takenaka and
Kazuma Mikami and
Shigeto Seno and
Hideo Matsuda},
title = {Automated transition analysis of activated gene regulation during
diauxic nutrient shift in Escherichia coli and adipocyte differentiation
in mouse cells},
journal = {{BMC} Bioinform.},
volume = {19-S},
number = {4},
pages = {49--59},
year = {2018},
url = {https://doi.org/10.1186/s12859-018-2072-y},
doi = {10.1186/S12859-018-2072-Y},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TakenakaMSM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangGLLZSP18,
author = {Shunyun Yang and
Runxin Guo and
Rui Liu and
Xiangke Liao and
Quan Zou and
Benyun Shi and
Shaoliang Peng},
title = {cmFSM: a scalable {CPU-MIC} coordinated drug-finding tool by frequent
subgraph mining},
journal = {{BMC} Bioinform.},
volume = {19-S},
number = {4},
pages = {35--47},
year = {2018},
url = {https://doi.org/10.1186/s12859-018-2071-z},
doi = {10.1186/S12859-018-2071-Z},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/YangGLLZSP18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhouWZXL18,
author = {Jiyun Zhou and
Hongpeng Wang and
Zhishan Zhao and
Ruifeng Xu and
Qin Lu},
title = {CNNH{\_}PSS: protein 8-class secondary structure prediction by convolutional
neural network with highway},
journal = {{BMC} Bioinform.},
volume = {19-S},
number = {4},
pages = {99--109},
year = {2018},
url = {https://doi.org/10.1186/s12859-018-2067-8},
doi = {10.1186/S12859-018-2067-8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhouWZXL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/AnselmettiDTCB18,
author = {Yoann Anselmetti and
Wandrille Duchemin and
Eric Tannier and
C{\'{e}}dric Chauve and
S{\`{e}}verine B{\'{e}}rard},
title = {Phylogenetic signal from rearrangements in 18 Anopheles species by
joint scaffolding extant and ancestral genomes},
journal = {{BMC} Genom.},
volume = {19},
number = {{S2}},
year = {2018},
url = {https://doi.org/10.1186/s12864-018-4466-7},
doi = {10.1186/S12864-018-4466-7},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/AnselmettiDTCB18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ChenZLHXHL18,
author = {Wen Chen and
Xuan Zhang and
Jing Li and
Shulan Huang and
Shuanglin Xiang and
Xiang Hu and
Changning Liu},
title = {Comprehensive analysis of coding-lncRNA gene co-expression network
uncovers conserved functional lncRNAs in zebrafish},
journal = {{BMC} Genom.},
volume = {19},
number = {{S2}},
year = {2018},
url = {https://doi.org/10.1186/s12864-018-4458-7},
doi = {10.1186/S12864-018-4458-7},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ChenZLHXHL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ChoiLPCBLWRKH18,
author = {Yoonha Choi and
Tiffany Ting Liu and
Daniel G. Pankratz and
Thomas V. Colby and
Neil M. Barth and
David A. Lynch and
P. Sean Walsh and
Ganesh Raghu and
Giulia C. Kennedy and
Jing Huang},
title = {Identification of usual interstitial pneumonia pattern using RNA-Seq
and machine learning: challenges and solutions},
journal = {{BMC} Genom.},
volume = {19},
number = {{S2}},
year = {2018},
url = {https://doi.org/10.1186/s12864-018-4467-6},
doi = {10.1186/S12864-018-4467-6},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ChoiLPCBLWRKH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ChouHHHHLCLHLCH18,
author = {Chih{-}Hung Chou and
Hsi{-}Yuan Huang and
Wei{-}Chih Huang and
Sheng{-}Da Hsu and
Chung{-}Der Hsiao and
Chia{-}Yu Liu and
Yu{-}Hung Chen and
Yu{-}Chen Liu and
Wei{-}Yun Huang and
Meng{-}Lin Lee and
Yi{-}Chang Chen and
Hsien{-}Da Huang},
title = {The aquatic animals' transcriptome resource for comparative functional
analysis},
journal = {{BMC} Genom.},
volume = {19},
number = {{S2}},
year = {2018},
url = {https://doi.org/10.1186/s12864-018-4463-x},
doi = {10.1186/S12864-018-4463-X},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ChouHHHHLCLHLCH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ChowCCZLWTHC18,
author = {Chi{-}Nga Chow and
Yi{-}Fan Chiang{-}Hsieh and
Chia{-}Hung Chien and
Han{-}Qin Zheng and
Tzong{-}Yi Lee and
Nai{-}Yun Wu and
Kuan{-}Chieh Tseng and
Ping{-}Fu Hou and
Wen{-}Chi Chang},
title = {Delineation of condition specific Cis- and Trans-acting elements in
plant promoters under various Endo- and exogenous stimuli},
journal = {{BMC} Genom.},
volume = {19},
number = {{S2}},
year = {2018},
url = {https://doi.org/10.1186/s12864-018-4469-4},
doi = {10.1186/S12864-018-4469-4},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ChowCCZLWTHC18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/HeSFP18,
author = {Dan He and
Subrata Saha and
Richard Finkers and
Laxmi Parida},
title = {Efficient algorithms for polyploid haplotype phasing},
journal = {{BMC} Genom.},
volume = {19},
number = {{S2}},
year = {2018},
url = {https://doi.org/10.1186/s12864-018-4464-9},
doi = {10.1186/S12864-018-4464-9},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/HeSFP18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/HuangLCHYYCT18,
author = {Po{-}Jung Huang and
Chi{-}Ching Lee and
Ling{-}Ya Chiu and
Kuo{-}Yang Huang and
Yuan{-}Ming Yeh and
Chia{-}Yu Yang and
Cheng{-}Hsun Chiu and
Petrus Tang},
title = {VAReporter: variant reporter for cancer research of massive parallel
sequencing},
journal = {{BMC} Genom.},
volume = {19},
number = {{S2}},
year = {2018},
url = {https://doi.org/10.1186/s12864-018-4468-5},
doi = {10.1186/S12864-018-4468-5},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/HuangLCHYYCT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/KimCXLGAHEAM18,
author = {Jeremie S. Kim and
Damla Senol Cali and
Hongyi Xin and
Donghyuk Lee and
Saugata Ghose and
Mohammed Alser and
Hasan Hassan and
Oguz Ergin and
Can Alkan and
Onur Mutlu},
title = {GRIM-Filter: Fast seed location filtering in {DNA} read mapping using
processing-in-memory technologies},
journal = {{BMC} Genom.},
volume = {19},
number = {{S2}},
year = {2018},
url = {https://doi.org/10.1186/s12864-018-4460-0},
doi = {10.1186/S12864-018-4460-0},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/KimCXLGAHEAM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/LiuHYLHH18,
author = {Yu{-}Chen Liu and
Hsiao{-}Chin Hong and
Chi{-}Dung Yang and
Wei{-}Hsiang Lee and
Hsin{-}Tzu Huang and
Hsien{-}Da Huang},
title = {Ouroboros resembling competitive endogenous loop {(ORCEL)} in circular
RNAs revealed through transcriptome sequencing dataset analysis},
journal = {{BMC} Genom.},
volume = {19},
number = {{S2}},
year = {2018},
url = {https://doi.org/10.1186/s12864-018-4456-9},
doi = {10.1186/S12864-018-4456-9},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/LiuHYLHH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/LiuRGWZLLSZ18,
author = {Li Liu and
Shuchao Ren and
Junqiang Guo and
Qingyi Wang and
Xiaotuo Zhang and
Peiran Liao and
Shipeng Li and
Ramanjulu Sunkar and
Yun Zheng},
title = {Genome-wide identification and comprehensive analysis of microRNAs
and phased small interfering RNAs in watermelon},
journal = {{BMC} Genom.},
volume = {19},
number = {{S2}},
year = {2018},
url = {https://doi.org/10.1186/s12864-018-4457-8},
doi = {10.1186/S12864-018-4457-8},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/LiuRGWZLLSZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/NoutahiE18,
author = {Emmanuel Noutahi and
Nadia El{-}Mabrouk},
title = {{GATC:} a genetic algorithm for gene tree construction under the Duplication-Transfer-Loss
model of evolution},
journal = {{BMC} Genom.},
volume = {19},
number = {{S2}},
year = {2018},
url = {https://doi.org/10.1186/s12864-018-4455-x},
doi = {10.1186/S12864-018-4455-X},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/NoutahiE18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ValenzuelaNVPM18,
author = {Daniel Valenzuela and
Tuukka Norri and
Niko V{\"{a}}lim{\"{a}}ki and
Esa Pitk{\"{a}}nen and
Veli M{\"{a}}kinen},
title = {Towards pan-genome read alignment to improve variation calling},
journal = {{BMC} Genom.},
volume = {19},
number = {{S2}},
year = {2018},
url = {https://doi.org/10.1186/s12864-018-4465-8},
doi = {10.1186/S12864-018-4465-8},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ValenzuelaNVPM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ZengWJ18,
author = {Wanwen Zeng and
Mengmeng Wu and
Rui Jiang},
title = {Prediction of enhancer-promoter interactions via natural language
processing},
journal = {{BMC} Genom.},
volume = {19},
number = {{S2}},
year = {2018},
url = {https://doi.org/10.1186/s12864-018-4459-6},
doi = {10.1186/S12864-018-4459-6},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ZengWJ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ZhengJTS18,
author = {Chunfang Zheng and
Yuji Jeong and
Madisyn Gabrielle Turcotte and
David Sankoff},
title = {Resolution effects in reconstructing ancestral genomes},
journal = {{BMC} Genom.},
volume = {19},
number = {{S2}},
year = {2018},
url = {https://doi.org/10.1186/s12864-018-4462-y},
doi = {10.1186/S12864-018-4462-Y},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ZhengJTS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ZhouZIYRCK18,
author = {Xinrui Zhou and
Jie Zheng and
Fransiskus Xaverius Ivan and
Rui Yin and
Shoba Ranganathan and
Vincent T. K. Chow and
Chee{-}Keong Kwoh},
title = {Computational analysis of the receptor binding specificity of novel
influenza {A/H7N9} viruses},
journal = {{BMC} Genom.},
volume = {19},
number = {{S2}},
year = {2018},
url = {https://doi.org/10.1186/s12864-018-4461-z},
doi = {10.1186/S12864-018-4461-Z},
timestamp = {Wed, 17 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ZhouZIYRCK18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/BuigaETS18,
author = {Petronela Buiga and
Ari Elson and
Lydia Tabernero and
Jean{-}Marc Schwartz},
title = {Regulation of dual specificity phosphatases in breast cancer during
initial treatment with Herceptin: a Boolean model analysis},
journal = {{BMC} Syst. Biol.},
volume = {12},
number = {1},
pages = {13--24},
year = {2018},
url = {https://doi.org/10.1186/s12918-018-0534-5},
doi = {10.1186/S12918-018-0534-5},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/BuigaETS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/LyuCJDFL18,
author = {Mengxuan Lyu and
Jiaxing Chen and
Yiqi Jiang and
Wei Dong and
Zhou Fang and
Shuai Cheng Li},
title = {KDiamend: a package for detecting key drivers in a molecular ecological
network of disease},
journal = {{BMC} Syst. Biol.},
volume = {12},
number = {1},
pages = {89--99},
year = {2018},
url = {https://doi.org/10.1186/s12918-018-0531-8},
doi = {10.1186/S12918-018-0531-8},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcsb/LyuCJDFL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/MoriNHAN18,
author = {Takuya Mori and
Hayliang Ngouv and
Morihiro Hayashida and
Tatsuya Akutsu and
Jose C. Nacher},
title = {ncRNA-disease association prediction based on sequence information
and tripartite network},
journal = {{BMC} Syst. Biol.},
volume = {12},
number = {1},
pages = {41--51},
year = {2018},
url = {https://doi.org/10.1186/s12918-018-0527-4},
doi = {10.1186/S12918-018-0527-4},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/MoriNHAN18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/MukherjeeHBK18,
author = {Kingshuk Mukherjee and
Md Mahmudul Hasan and
Christina Boucher and
Tamer Kahveci},
title = {Counting motifs in dynamic networks},
journal = {{BMC} Syst. Biol.},
volume = {12},
number = {1},
pages = {1--12},
year = {2018},
url = {https://doi.org/10.1186/s12918-018-0533-6},
doi = {10.1186/S12918-018-0533-6},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/MukherjeeHBK18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/QiuJCC18,
author = {Yushan Qiu and
Hao Jiang and
Wai{-}Ki Ching and
Xiaoqing Cheng},
title = {Discovery of Boolean metabolic networks: integer linear programming
based approach},
journal = {{BMC} Syst. Biol.},
volume = {12},
number = {1},
pages = {53--60},
year = {2018},
url = {https://doi.org/10.1186/s12918-018-0528-3},
doi = {10.1186/S12918-018-0528-3},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/QiuJCC18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/RanjanCZ18,
author = {Bobby Ranjan and
Ket Hing Chong and
Jie Zheng},
title = {Composite mathematical modeling of calcium signaling behind neuronal
cell death in Alzheimer's disease},
journal = {{BMC} Syst. Biol.},
volume = {12},
number = {1},
pages = {61--74},
year = {2018},
url = {https://doi.org/10.1186/s12918-018-0529-2},
doi = {10.1186/S12918-018-0529-2},
timestamp = {Thu, 02 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcsb/RanjanCZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/TeraguchiK18,
author = {Shunsuke Teraguchi and
Yutaro Kumagai},
title = {Estimation of diffusion constants from single molecular measurement
without explicit tracking},
journal = {{BMC} Syst. Biol.},
volume = {12},
number = {1},
pages = {25--39},
year = {2018},
url = {https://doi.org/10.1186/s12918-018-0526-5},
doi = {10.1186/S12918-018-0526-5},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/TeraguchiK18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/YimYJL18,
author = {Soorin Yim and
Hasun Yu and
Dongjin Jang and
Doheon Lee},
title = {Annotating activation/inhibition relationships to protein-protein
interactions using gene ontology relations},
journal = {{BMC} Syst. Biol.},
volume = {12},
number = {1},
pages = {111--122},
year = {2018},
url = {https://doi.org/10.1186/s12918-018-0535-4},
doi = {10.1186/S12918-018-0535-4},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/YimYJL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/YuMSHCDY18,
author = {Hui Yu and
Kui{-}Tao Mao and
Jian{-}Yu Shi and
Hua Huang and
Zhi Chen and
Kai Dong and
Siu{-}Ming Yiu},
title = {Predicting and understanding comprehensive drug-drug interactions
via semi-nonnegative matrix factorization},
journal = {{BMC} Syst. Biol.},
volume = {12},
number = {1},
pages = {101--110},
year = {2018},
url = {https://doi.org/10.1186/s12918-018-0532-7},
doi = {10.1186/S12918-018-0532-7},
timestamp = {Thu, 27 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/YuMSHCDY18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/Zhang18,
author = {Shuqin Zhang},
title = {Comparisons of gene coexpression network modules in breast cancer
and ovarian cancer},
journal = {{BMC} Syst. Biol.},
volume = {12},
number = {1},
pages = {75--87},
year = {2018},
url = {https://doi.org/10.1186/s12918-018-0530-9},
doi = {10.1186/S12918-018-0530-9},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/Zhang18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AlankoCBM17,
author = {Jarno Alanko and
Fabio Cunial and
Djamal Belazzougui and
Veli M{\"{a}}kinen},
title = {A framework for space-efficient read clustering in metagenomic samples},
journal = {{BMC} Bioinform.},
volume = {18},
number = {{S-3}},
pages = {49--60},
year = {2017},
url = {https://doi.org/10.1186/s12859-017-1466-6},
doi = {10.1186/S12859-017-1466-6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AlankoCBM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Bansal17,
author = {Vikas Bansal},
title = {A computational method for estimating the {PCR} duplication rate in
{DNA} and RNA-seq experiments},
journal = {{BMC} Bioinform.},
volume = {18},
number = {{S-3}},
pages = {113--123},
year = {2017},
url = {https://doi.org/10.1186/s12859-017-1471-9},
doi = {10.1186/S12859-017-1471-9},
timestamp = {Fri, 09 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Bansal17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenHZHXG17,
author = {Shifu Chen and
Tanxiao Huang and
Yanqing Zhou and
Yue Han and
Mingyan Xu and
Jia Gu},
title = {AfterQC: automatic filtering, trimming, error removing and quality
control for fastq data},
journal = {{BMC} Bioinform.},
volume = {18},
number = {{S-3}},
pages = {91--100},
year = {2017},
url = {https://doi.org/10.1186/s12859-017-1469-3},
doi = {10.1186/S12859-017-1469-3},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenHZHXG17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GongZZWSZB17,
author = {Hai'e Gong and
Haicang Zhang and
Jianwei Zhu and
Chao Wang and
Shiwei Sun and
Wei{-}Mou Zheng and
Dongbo Bu},
title = {Improving prediction of burial state of residues by exploiting correlation
among residues},
journal = {{BMC} Bioinform.},
volume = {18},
number = {{S-3}},
pages = {165--175},
year = {2017},
url = {https://doi.org/10.1186/s12859-017-1475-5},
doi = {10.1186/S12859-017-1475-5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GongZZWSZB17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Lai17,
author = {Yinglei Lai},
title = {A statistical method for the conservative adjustment of false discovery
rate (q-value)},
journal = {{BMC} Bioinform.},
volume = {18},
number = {{S-3}},
pages = {155--163},
year = {2017},
url = {https://doi.org/10.1186/s12859-017-1474-6},
doi = {10.1186/S12859-017-1474-6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Lai17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MaSL17,
author = {Weiyun Ma and
Dmitriy Smirnov and
Ran Libeskind{-}Hadas},
title = {{DTL} reconciliation repair},
journal = {{BMC} Bioinform.},
volume = {18},
number = {{S-3}},
pages = {13--21},
year = {2017},
url = {https://doi.org/10.1186/s12859-017-1463-9},
doi = {10.1186/S12859-017-1463-9},
timestamp = {Sun, 06 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/MaSL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SunWW17,
author = {Lei Sun and
Jun Wang and
Jinmao Wei},
title = {{AVC:} Selecting discriminative features on basis of {AUC} by maximizing
variable complementarity},
journal = {{BMC} Bioinform.},
volume = {18},
number = {{S-3}},
pages = {73--89},
year = {2017},
url = {https://doi.org/10.1186/s12859-017-1468-4},
doi = {10.1186/S12859-017-1468-4},
timestamp = {Fri, 30 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SunWW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TennakoonS17,
author = {Chandana Tennakoon and
Wing{-}Kin Sung},
title = {{BATVI:} Fast, sensitive and accurate detection of virus integrations},
journal = {{BMC} Bioinform.},
volume = {18},
number = {{S-3}},
pages = {101--111},
year = {2017},
url = {https://doi.org/10.1186/s12859-017-1470-x},
doi = {10.1186/S12859-017-1470-X},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TennakoonS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TienCW17,
author = {Wei{-}Sheng Tien and
Jun{-}Hong Chen and
Kun{-}Pin Wu},
title = {SheddomeDB: the ectodomain shedding database for membrane-bound shed
markers},
journal = {{BMC} Bioinform.},
volume = {18},
number = {{S-3}},
pages = {31--48},
year = {2017},
url = {https://doi.org/10.1186/s12859-017-1465-7},
doi = {10.1186/S12859-017-1465-7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TienCW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WengHKHKCWLL17,
author = {Shun{-}Long Weng and
Kai{-}Yao Huang and
Fergie Joanda Kaunang and
Chien{-}Hsun Huang and
Hui{-}Ju Kao and
Tzu{-}Hao Chang and
Hsin{-}Yao Wang and
Jang{-}Jih Lu and
Tzong{-}Yi Lee},
title = {Investigation and identification of protein carbonylation sites based
on position-specific amino acid composition and physicochemical features},
journal = {{BMC} Bioinform.},
volume = {18},
number = {{S-3}},
pages = {125--141},
year = {2017},
url = {https://doi.org/10.1186/s12859-017-1472-8},
doi = {10.1186/S12859-017-1472-8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WengHKHKCWLL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/XiaLDX17,
author = {Yuchao Xia and
Yun Liu and
Minghua Deng and
Ruibin Xi},
title = {Pysim-sv: a package for simulating structural variation data with
GC-biases},
journal = {{BMC} Bioinform.},
volume = {18},
number = {{S-3}},
pages = {23--30},
year = {2017},
url = {https://doi.org/10.1186/s12859-017-1464-8},
doi = {10.1186/S12859-017-1464-8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/XiaLDX17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangL0L17,
author = {Junpeng Zhang and
Thuc Duy Le and
Lin Liu and
Jiuyong Li},
title = {Identifying miRNA sponge modules using biclustering and regulatory
scores},
journal = {{BMC} Bioinform.},
volume = {18},
number = {{S-3}},
pages = {61--72},
year = {2017},
url = {https://doi.org/10.1186/s12859-017-1467-5},
doi = {10.1186/S12859-017-1467-5},
timestamp = {Thu, 29 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangL0L17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangLSZC17,
author = {Chuanchao Zhang and
Juan Liu and
Qianqian Shi and
Tao Zeng and
Luonan Chen},
title = {Comparative network stratification analysis for identifying functional
interpretable network biomarkers},
journal = {{BMC} Bioinform.},
volume = {18},
number = {{S-3}},
pages = {1--12},
year = {2017},
url = {https://doi.org/10.1186/s12859-017-1462-x},
doi = {10.1186/S12859-017-1462-X},
timestamp = {Thu, 05 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangLSZC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangYRAFS17,
author = {Mengge Zhang and
Lianping Yang and
Jie Ren and
Nathan A. Ahlgren and
Jed A. Fuhrman and
Fengzhu Sun},
title = {Prediction of virus-host infectious association by supervised learning
methods},
journal = {{BMC} Bioinform.},
volume = {18},
number = {{S-3}},
pages = {143--154},
year = {2017},
url = {https://doi.org/10.1186/s12859-017-1473-7},
doi = {10.1186/S12859-017-1473-7},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangYRAFS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/BalvociuteH17,
author = {Monika Balvociute and
Daniel H. Huson},
title = {SILVA, RDP, Greengenes, {NCBI} and {OTT} - how do these taxonomies
compare?},
journal = {{BMC} Genom.},
volume = {18},
number = {{S2}},
year = {2017},
url = {https://doi.org/10.1186/s12864-017-3501-4},
doi = {10.1186/S12864-017-3501-4},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/BalvociuteH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ChenPL17,
author = {Vicky Chen and
John W. Paisley and
Xinghua Lu},
title = {Revealing common disease mechanisms shared by tumors of different
tissues of origin through semantic representation of genomic alterations
and topic modeling},
journal = {{BMC} Genom.},
volume = {18},
number = {{S2}},
year = {2017},
url = {https://doi.org/10.1186/s12864-017-3494-z},
doi = {10.1186/S12864-017-3494-Z},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ChenPL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/FengLZZCSM17,
author = {Xiao{-}dong Feng and
Li{-}wei Li and
Jianhong Zhang and
Yun{-}ping Zhu and
Cheng Chang and
Kun{-}xian Shu and
Jie Ma},
title = {Using the entrapment sequence method as a standard to evaluate key
steps of proteomics data analysis process},
journal = {{BMC} Genom.},
volume = {18},
number = {{S2}},
year = {2017},
url = {https://doi.org/10.1186/s12864-017-3491-2},
doi = {10.1186/S12864-017-3491-2},
timestamp = {Fri, 17 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcgenomics/FengLZZCSM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/GohW17,
author = {Wilson Wen Bin Goh and
Limsoon Wong},
title = {Protein complex-based analysis is resistant to the obfuscating consequences
of batch effects - a case study in clinical proteomics},
journal = {{BMC} Genom.},
volume = {18},
number = {{S2}},
year = {2017},
url = {https://doi.org/10.1186/s12864-017-3490-3},
doi = {10.1186/S12864-017-3490-3},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/GohW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/HsuHCY17,
author = {Hui{-}Hui Hsu and
Yen{-}Chao Hsu and
Li{-}Jen Chang and
Jinn{-}Moon Yang},
title = {An integrated approach with new strategies for {QSAR} models and lead
optimization},
journal = {{BMC} Genom.},
volume = {18},
number = {{S2}},
year = {2017},
url = {https://doi.org/10.1186/s12864-017-3503-2},
doi = {10.1186/S12864-017-3503-2},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/HsuHCY17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/LeemP17,
author = {Sangseob Leem and
Taesung Park},
title = {An empirical fuzzy multifactor dimensionality reduction method for
detecting gene-gene interactions},
journal = {{BMC} Genom.},
volume = {18},
number = {{S2}},
year = {2017},
url = {https://doi.org/10.1186/s12864-017-3496-x},
doi = {10.1186/S12864-017-3496-X},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/LeemP17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/LiPHZH17,
author = {Dong Li and
Zhisong Pan and
Guyu Hu and
Zexuan Zhu and
Shan He},
title = {Active module identification in intracellular networks using a memetic
algorithm with a new binary decoding scheme},
journal = {{BMC} Genom.},
volume = {18},
number = {{S2}},
year = {2017},
url = {https://doi.org/10.1186/s12864-017-3495-y},
doi = {10.1186/S12864-017-3495-Y},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/LiPHZH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/LiuCKH17,
author = {Yu{-}Chen Liu and
Wen Liang Chen and
Wei{-}Hsiang Kung and
Hsien{-}Da Huang},
title = {Plant miRNAs found in human circulating system provide evidences of
cross kingdom RNAi},
journal = {{BMC} Genom.},
volume = {18},
number = {{S2}},
year = {2017},
url = {https://doi.org/10.1186/s12864-017-3502-3},
doi = {10.1186/S12864-017-3502-3},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/LiuCKH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/LuZL17,
author = {Bingxin Lu and
Louxin Zhang and
Hon Wai Leong},
title = {A program to compute the soft Robinson-Foulds distance between phylogenetic
networks},
journal = {{BMC} Genom.},
volume = {18},
number = {{S2}},
year = {2017},
url = {https://doi.org/10.1186/s12864-017-3500-5},
doi = {10.1186/S12864-017-3500-5},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/LuZL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/PengYGLLYWY17,
author = {Shaoliang Peng and
Shunyun Yang and
Ming Gao and
Xiangke Liao and
Jie Liu and
Canqun Yang and
Chengkun Wu and
Wenqiang Yu},
title = {P-Hint-Hunt: a deep parallelized whole genome {DNA} methylation detection
tool},
journal = {{BMC} Genom.},
volume = {18},
number = {{S2}},
year = {2017},
url = {https://doi.org/10.1186/s12864-017-3497-9},
doi = {10.1186/S12864-017-3497-9},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/PengYGLLYWY17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/RenSEL17,
author = {Jing Ren and
Jiangning Song and
John T. Ellis and
Jinyan Li},
title = {Staged heterogeneity learning to identify conformational B-cell epitopes
from antigen sequences},
journal = {{BMC} Genom.},
volume = {18},
number = {{S2}},
year = {2017},
url = {https://doi.org/10.1186/s12864-017-3493-0},
doi = {10.1186/S12864-017-3493-0},
timestamp = {Thu, 16 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/RenSEL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/SunKT17,
author = {Shuhao Sun and
Fima C. Klebaner and
Tianhai Tian},
title = {Mathematical modelling for variations of inbreeding populations fitness
with single and polygenic traits},
journal = {{BMC} Genom.},
volume = {18},
number = {{S2}},
year = {2017},
url = {https://doi.org/10.1186/s12864-017-3492-1},
doi = {10.1186/S12864-017-3492-1},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/SunKT17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/TadaTA17,
author = {Ipputa Tada and
Yasuhiro Tanizawa and
Masanori Arita},
title = {Visualization of consensus genome structure without using a reference
genome},
journal = {{BMC} Genom.},
volume = {18},
number = {{S2}},
year = {2017},
url = {https://doi.org/10.1186/s12864-017-3499-7},
doi = {10.1186/S12864-017-3499-7},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/TadaTA17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/YangHHK17,
author = {Yang Yang and
Ning Huang and
Luning Hao and
Wei Kong},
title = {A clustering-based approach for efficient identification of microRNA
combinatorial biomarkers},
journal = {{BMC} Genom.},
volume = {18},
number = {{S2}},
year = {2017},
url = {https://doi.org/10.1186/s12864-017-3498-8},
doi = {10.1186/S12864-017-3498-8},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/YangHHK17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/Balasubramanian17,
author = {Pavithra K. Balasubramanian and
Anand Balupuri and
Hee{-}Young Kang and
Seung Joo Cho},
title = {Receptor-guided 3D-QSAR studies, molecular dynamics simulation and
free energy calculations of Btk kinase inhibitors},
journal = {{BMC} Syst. Biol.},
volume = {11},
number = {{S-2}},
pages = {6:1--6:11},
year = {2017},
url = {https://doi.org/10.1186/s12918-017-0385-5},
doi = {10.1186/S12918-017-0385-5},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/Balasubramanian17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ChenLH17,
author = {Weiqi Chen and
Jing Liu and
Shan He},
title = {Prior knowledge guided active modules identification: an integrated
multi-objective approach},
journal = {{BMC} Syst. Biol.},
volume = {11},
number = {{S-2}},
pages = {8:1--8:12},
year = {2017},
url = {https://doi.org/10.1186/s12918-017-0388-2},
doi = {10.1186/S12918-017-0388-2},
timestamp = {Thu, 25 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcsb/ChenLH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ChengHWLGZ17,
author = {Zhanzhan Cheng and
Kai Huang and
Yang Wang and
Hui Liu and
Jihong Guan and
Shuigeng Zhou},
title = {Selecting high-quality negative samples for effectively predicting
protein-RNA interactions},
journal = {{BMC} Syst. Biol.},
volume = {11},
number = {{S-2}},
pages = {9:1--9:11},
year = {2017},
url = {https://doi.org/10.1186/s12918-017-0390-8},
doi = {10.1186/S12918-017-0390-8},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/ChengHWLGZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ChoiPCLH17,
author = {Daesik Choi and
Byungkyu Park and
Hanju Chae and
Wook Lee and
Kyungsook Han},
title = {Predicting protein-binding regions in {RNA} using nucleotide profiles
and compositions},
journal = {{BMC} Syst. Biol.},
volume = {11},
number = {{S-2}},
pages = {16:1--16:12},
year = {2017},
url = {https://doi.org/10.1186/s12918-017-0386-4},
doi = {10.1186/S12918-017-0386-4},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/ChoiPCLH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/LiuGJ17,
author = {Qiao Liu and
Mingxin Gan and
Rui Jiang},
title = {A sequence-based method to predict the impact of regulatory variants
using random forest},
journal = {{BMC} Syst. Biol.},
volume = {11},
number = {{S-2}},
pages = {7:1--7:9},
year = {2017},
url = {https://doi.org/10.1186/s12918-017-0389-1},
doi = {10.1186/S12918-017-0389-1},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcsb/LiuGJ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/MoonLJLSK17,
author = {Ji Hwan Moon and
Sangsoo Lim and
Kyuri Jo and
Sangseon Lee and
Seokjun Seo and
Sun Kim},
title = {PINTnet: construction of condition-specific pathway interaction network
by computing shortest paths on weighted {PPI}},
journal = {{BMC} Syst. Biol.},
volume = {11},
number = {{S-2}},
pages = {15:1--15:13},
year = {2017},
url = {https://doi.org/10.1186/s12918-017-0387-3},
doi = {10.1186/S12918-017-0387-3},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/MoonLJLSK17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenCCL16,
author = {Lujia Chen and
Chunhui Cai and
Vicky Chen and
Xinghua Lu},
title = {Learning a hierarchical representation of the yeast transcriptomic
machinery using an autoencoder model},
journal = {{BMC} Bioinform.},
volume = {17},
number = {{S-1}},
pages = {9},
year = {2016},
url = {https://doi.org/10.1186/s12859-015-0852-1},
doi = {10.1186/S12859-015-0852-1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenCCL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FanLHCD16,
author = {Chao Fan and
Diwei Liu and
Rui Huang and
Zhigang Chen and
Lei Deng},
title = {PredRSA: a gradient boosted regression trees approach for predicting
protein solvent accessibility},
journal = {{BMC} Bioinform.},
volume = {17},
number = {{S-1}},
pages = {8},
year = {2016},
url = {https://doi.org/10.1186/s12859-015-0851-2},
doi = {10.1186/S12859-015-0851-2},
timestamp = {Tue, 20 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FanLHCD16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuangCHHN16,
author = {Chien{-}Hung Huang and
Peter Mu{-}Hsin Chang and
Chia{-}Wei Hsu and
Chi{-}Ying F. Huang and
Ka{-}Lok Ng},
title = {Drug repositioning for non-small cell lung cancer by using machine
learning algorithms and topological graph theory},
journal = {{BMC} Bioinform.},
volume = {17},
number = {{S-1}},
pages = {2},
year = {2016},
url = {https://doi.org/10.1186/s12859-015-0845-0},
doi = {10.1186/S12859-015-0845-0},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HuangCHHN16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JainRKBLH16,
author = {Suvir Jain and
Kashyap R. and
Tsung{-}Ting Kuo and
Shitij Bhargava and
Gordon Lin and
Chun{-}Nan Hsu},
title = {Weakly supervised learning of biomedical information extraction from
curated data},
journal = {{BMC} Bioinform.},
volume = {17},
number = {{S-1}},
pages = {1},
year = {2016},
url = {https://doi.org/10.1186/s12859-015-0844-1},
doi = {10.1186/S12859-015-0844-1},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JainRKBLH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KumarB16,
author = {Sunil Kumar and
Philipp Bucher},
title = {Predicting transcription factor site occupancy using {DNA} sequence
intrinsic and cell-type specific chromatin features},
journal = {{BMC} Bioinform.},
volume = {17},
number = {{S-1}},
pages = {4},
year = {2016},
url = {https://doi.org/10.1186/s12859-015-0846-z},
doi = {10.1186/S12859-015-0846-Z},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KumarB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LeeWHHLW16,
author = {Shih{-}Wei Lee and
Lawrence Shih{-}Hsin Wu and
Guan{-}Mau Huang and
Kai{-}Yao Huang and
Tzong{-}Yi Lee and
Julia Tzu{-}Ya Weng},
title = {Gene expression profiling identifies candidate biomarkers for active
and latent tuberculosis},
journal = {{BMC} Bioinform.},
volume = {17},
number = {{S-1}},
pages = {3},
year = {2016},
url = {https://doi.org/10.1186/s12859-015-0848-x},
doi = {10.1186/S12859-015-0848-X},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LeeWHHLW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LyuL16,
author = {Yafei Lyu and
Qunhua Li},
title = {A semi-parametric statistical model for integrating gene expression
profiles across different platforms},
journal = {{BMC} Bioinform.},
volume = {17},
number = {{S-1}},
pages = {5},
year = {2016},
url = {https://doi.org/10.1186/s12859-015-0847-y},
doi = {10.1186/S12859-015-0847-Y},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LyuL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PaganKLTMTKWSHW16,
author = {Moraima Pagan and
Richard T. Kloos and
Chu{-}Fang Lin and
Kevin J. Travers and
Hajime Matsuzaki and
Ed Y. Tom and
Su Yeon Kim and
Mei G. Wong and
Andrew C. Stewart and
Jing Huang and
P. Sean Walsh and
Robert J. Monroe and
Giulia C. Kennedy},
title = {The diagnostic application of {RNA} sequencing in patients with thyroid
cancer: an analysis of 851 variants and 133 fusions in 524 genes},
journal = {{BMC} Bioinform.},
volume = {17},
number = {{S-1}},
pages = {6},
year = {2016},
url = {https://doi.org/10.1186/s12859-015-0849-9},
doi = {10.1186/S12859-015-0849-9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PaganKLTMTKWSHW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangHKXQ16,
author = {Henan Wang and
Chong He and
Garima Kushwaha and
Dong Xu and
Jing Qiu},
title = {A full Bayesian partition model for identifying hypo- and hyper-methylated
loci from single nucleotide resolution sequencing data},
journal = {{BMC} Bioinform.},
volume = {17},
number = {{S-1}},
pages = {7},
year = {2016},
url = {https://doi.org/10.1186/s12859-015-0850-3},
doi = {10.1186/S12859-015-0850-3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WangHKXQ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangXS16,
author = {Yang Yang and
Zhuangdi Xu and
Dandan Song},
title = {Missing value imputation for microRNA expression data by using a GO-based
similarity measure},
journal = {{BMC} Bioinform.},
volume = {17},
number = {{S-1}},
pages = {10},
year = {2016},
url = {https://doi.org/10.1186/s12859-015-0853-0},
doi = {10.1186/S12859-015-0853-0},
timestamp = {Tue, 17 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/YangXS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/BuiWLCWL16,
author = {Van{-}Minh Bui and
Shun{-}Long Weng and
Cheng{-}Tsung Lu and
Tzu{-}Hao Chang and
Julia Tzu{-}Ya Weng and
Tzong{-}Yi Lee},
title = {SOHSite: incorporating evolutionary information and physicochemical
properties to identify protein \emph{S}-sulfenylation sites},
journal = {{BMC} Genom.},
volume = {17},
number = {{S-1}},
pages = {9},
year = {2016},
url = {https://doi.org/10.1186/s12864-015-2299-1},
doi = {10.1186/S12864-015-2299-1},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/BuiWLCWL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/HeLTMZ16,
author = {Feifei He and
Yang Li and
Yu{-}Hang Tang and
Jian Ma and
Huaiqiu Zhu},
title = {Identifying micro-inversions using high-throughput sequencing reads},
journal = {{BMC} Genom.},
volume = {17},
number = {{S-1}},
pages = {4},
year = {2016},
url = {https://doi.org/10.1186/s12864-015-2305-7},
doi = {10.1186/S12864-015-2305-7},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/HeLTMZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/HejaseL16,
author = {Hussein A. Hejase and
Kevin J. Liu},
title = {Mapping the genomic architecture of adaptive traits with interspecific
introgressive origin: a coalescent-based approach},
journal = {{BMC} Genom.},
volume = {17},
number = {{S-1}},
pages = {8},
year = {2016},
url = {https://doi.org/10.1186/s12864-015-2298-2},
doi = {10.1186/S12864-015-2298-2},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/HejaseL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/JiangY16,
author = {Wei Jiang and
Weichuan Yu},
title = {Power estimation and sample size determination for replication studies
of genome-wide association studies},
journal = {{BMC} Genom.},
volume = {17},
number = {{S-1}},
pages = {3},
year = {2016},
url = {https://doi.org/10.1186/s12864-015-2296-4},
doi = {10.1186/S12864-015-2296-4},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/JiangY16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/Karim0LL16,
author = {S. M. Masud Karim and
Lin Liu and
Thuc Duy Le and
Jiuyong Li},
title = {Identification of miRNA-mRNA regulatory modules by exploring collective
group relationships},
journal = {{BMC} Genom.},
volume = {17},
number = {{S-1}},
pages = {7},
year = {2016},
url = {https://doi.org/10.1186/s12864-015-2300-z},
doi = {10.1186/S12864-015-2300-Z},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/Karim0LL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/KimHK16,
author = {Min{-}Su Kim and
Benjamin Hur and
Sun Kim},
title = {RDDpred: a condition-specific RNA-editing prediction model from RNA-seq
data},
journal = {{BMC} Genom.},
volume = {17},
number = {{S-1}},
pages = {5},
year = {2016},
url = {https://doi.org/10.1186/s12864-015-2301-y},
doi = {10.1186/S12864-015-2301-Y},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcgenomics/KimHK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/LiRL16,
author = {Wei Vivian Li and
Zahra S. Razaee and
Jingyi Jessica Li},
title = {Epigenome overlap measure {(EPOM)} for comparing tissue/cell types
based on chromatin states},
journal = {{BMC} Genom.},
volume = {17},
number = {{S-1}},
pages = {10},
year = {2016},
url = {https://doi.org/10.1186/s12864-015-2303-9},
doi = {10.1186/S12864-015-2303-9},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/LiRL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/LiuHCHCLLHAAHH16,
author = {Yu{-}Chen Liu and
Sheng{-}Da Hsu and
Chih{-}Hung Chou and
Wei{-}Yun Huang and
Yu{-}Hung Chen and
Chia{-}Yu Liu and
Guan{-}Jay Lyu and
Shao{-}Zhen Huang and
Sergey Aganezov Jr. and
Max A. Alekseyev and
Chung{-}Der Hsiao and
Hsien{-}Da Huang},
title = {Transcriptome sequencing based annotation and homologous evidence
based scaffolding of \emph{Anguilla japonica} draft genome},
journal = {{BMC} Genom.},
volume = {17},
number = {{S-1}},
pages = {13},
year = {2016},
url = {https://doi.org/10.1186/s12864-015-2306-6},
doi = {10.1186/S12864-015-2306-6},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/LiuHCHCLLHAAHH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/NairHSGLBM16,
author = {Nishanth Ulhas Nair and
Laura Hunter and
Mingfu Shao and
Paulina Grnarova and
Yu Lin and
Philipp Bucher and
Bernard M. E. Moret},
title = {A maximum-likelihood approach for building cell-type trees by lifting},
journal = {{BMC} Genom.},
volume = {17},
number = {{S-1}},
pages = {14},
year = {2016},
url = {https://doi.org/10.1186/s12864-015-2297-3},
doi = {10.1186/S12864-015-2297-3},
timestamp = {Tue, 31 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/NairHSGLBM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/NariaiKMKN16,
author = {Naoki Nariai and
Kaname Kojima and
Takahiro Mimori and
Yosuke Kawai and
Masao Nagasaki},
title = {A Bayesian approach for estimating allele-specific expression from
RNA-Seq data with diploid genomes},
journal = {{BMC} Genom.},
volume = {17},
number = {{S-1}},
pages = {2},
year = {2016},
url = {https://doi.org/10.1186/s12864-015-2295-5},
doi = {10.1186/S12864-015-2295-5},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcgenomics/NariaiKMKN16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/PaszekG16,
author = {Jaroslaw Paszek and
Pawel G{\'{o}}recki},
title = {Genomic duplication problems for unrooted gene trees},
journal = {{BMC} Genom.},
volume = {17},
number = {{S-1}},
pages = {15},
year = {2016},
url = {https://doi.org/10.1186/s12864-015-2308-4},
doi = {10.1186/S12864-015-2308-4},
timestamp = {Fri, 17 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/PaszekG16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/RomanXS16,
author = {Theodore Roman and
Lu Xie and
Russell Schwartz},
title = {Medoidshift clustering applied to genomic bulk tumor data},
journal = {{BMC} Genom.},
volume = {17},
number = {{S-1}},
pages = {6},
year = {2016},
url = {https://doi.org/10.1186/s12864-015-2302-x},
doi = {10.1186/S12864-015-2302-X},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/RomanXS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/TeraiIKHA16,
author = {Goro Terai and
Junichi Iwakiri and
Tomoshi Kameda and
Michiaki Hamada and
Kiyoshi Asai},
title = {Comprehensive prediction of lncRNA-RNA interactions in human transcriptome},
journal = {{BMC} Genom.},
volume = {17},
number = {{S-1}},
pages = {12},
year = {2016},
url = {https://doi.org/10.1186/s12864-015-2307-5},
doi = {10.1186/S12864-015-2307-5},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/TeraiIKHA16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/YeL16,
author = {Yuting Ye and
Jingyi Jessica Li},
title = {{NMFP:} a non-negative matrix factorization based preselection method
to increase accuracy of identifying mRNA isoforms from RNA-seq data},
journal = {{BMC} Genom.},
volume = {17},
number = {{S-1}},
pages = {11},
year = {2016},
url = {https://doi.org/10.1186/s12864-015-2304-8},
doi = {10.1186/S12864-015-2304-8},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/YeL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ZhengS16,
author = {Chunfang Zheng and
David Sankoff},
title = {Locating rearrangement events in a phylogeny based on highly fragmented
assemblies},
journal = {{BMC} Genom.},
volume = {17},
number = {{S-1}},
pages = {1},
year = {2016},
url = {https://doi.org/10.1186/s12864-015-2294-6},
doi = {10.1186/S12864-015-2294-6},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ZhengS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ChangHLTTCW16,
author = {Hsin{-}Chuan Chang and
Tsung{-}Han Hsieh and
Yi{-}Wei Lee and
Cheng{-}Fong Tsai and
Ya{-}Ni Tsai and
Cheng{-}Chung Cheng and
Hsei{-}Wei Wang},
title = {c-Myc and viral cofactor Kaposin {B} co-operate to elicit angiogenesis
through modulating miRNome traits of endothelial cells},
journal = {{BMC} Syst. Biol.},
volume = {10},
number = {{S-1}},
pages = {1},
year = {2016},
url = {https://doi.org/10.1186/s12918-015-0242-3},
doi = {10.1186/S12918-015-0242-3},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/ChangHLTTCW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/HuangSKJWL16,
author = {Chien{-}Hsun Huang and
Min{-}Gang Su and
Hui{-}Ju Kao and
Jhih{-}Hua Jhong and
Shun{-}Long Weng and
Tzong{-}Yi Lee},
title = {UbiSite: incorporating two-layered machine learning method with substrate
motifs to predict ubiquitin-conjugation site on lysines},
journal = {{BMC} Syst. Biol.},
volume = {10},
number = {{S-1}},
pages = {6},
year = {2016},
url = {https://doi.org/10.1186/s12918-015-0246-z},
doi = {10.1186/S12918-015-0246-Z},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/HuangSKJWL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/HuangWLW16,
author = {Kai{-}Yao Huang and
Julia Tzu{-}Ya Weng and
Tzong{-}Yi Lee and
Shun{-}Long Weng},
title = {A new scheme to discover functional associations and regulatory networks
of {E3} ubiquitin ligases},
journal = {{BMC} Syst. Biol.},
volume = {10},
number = {{S-1}},
pages = {3},
year = {2016},
url = {https://doi.org/10.1186/s12918-015-0244-1},
doi = {10.1186/S12918-015-0244-1},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/HuangWLW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/MangericaoPZ16,
author = {Tatiana C. Mangericao and
Zhanhao Peng and
Xuegong Zhang},
title = {Computational prediction of {CRISPR} cassettes in gut metagenome samples
from Chinese type-2 diabetic patients and healthy controls},
journal = {{BMC} Syst. Biol.},
volume = {10},
number = {{S-1}},
pages = {5},
year = {2016},
url = {https://doi.org/10.1186/s12918-015-0248-x},
doi = {10.1186/S12918-015-0248-X},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/MangericaoPZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/PlattBZP16,
author = {Daniel E. Platt and
Saugata Basu and
Pierre A. Zalloua and
Laxmi Parida},
title = {Characterizing redescriptions using persistent homology to isolate
genetic pathways contributing to pathogenesis},
journal = {{BMC} Syst. Biol.},
volume = {10},
number = {{S-1}},
pages = {10},
year = {2016},
url = {https://doi.org/10.1186/s12918-015-0251-2},
doi = {10.1186/S12918-015-0251-2},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/PlattBZP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/QinLSL16,
author = {Wenyi Qin and
Cong Liu and
Monsheel Sodhi and
Hui Lu},
title = {Meta-analysis of sex differences in gene expression in schizophrenia},
journal = {{BMC} Syst. Biol.},
volume = {10},
number = {{S-1}},
pages = {9},
year = {2016},
url = {https://doi.org/10.1186/s12918-015-0250-3},
doi = {10.1186/S12918-015-0250-3},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcsb/QinLSL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/YuCPJKL16,
author = {Hasun Yu and
Sungji Choo and
Junseok Park and
Jinmyung Jung and
Yeeok Kang and
Doheon Lee},
title = {Prediction of drugs having opposite effects on disease genes in a
directed network},
journal = {{BMC} Syst. Biol.},
volume = {10},
number = {{S-1}},
pages = {2},
year = {2016},
url = {https://doi.org/10.1186/s12918-015-0243-2},
doi = {10.1186/S12918-015-0243-2},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/YuCPJKL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/YuanLTD16,
author = {Huili Yuan and
Zhenye Li and
Nelson L. S. Tang and
Minghua Deng},
title = {A network based covariance test for detecting multivariate eQTL in
saccharomyces cerevisiae},
journal = {{BMC} Syst. Biol.},
volume = {10},
number = {{S-1}},
pages = {8},
year = {2016},
url = {https://doi.org/10.1186/s12918-015-0245-0},
doi = {10.1186/S12918-015-0245-0},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcsb/YuanLTD16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ZhangCS16,
author = {Wangshu Zhang and
Marcelo P. Coba and
Fengzhu Sun},
title = {Inference of domain-disease associations from domain-protein, protein-disease
and disease-disease relationships},
journal = {{BMC} Syst. Biol.},
volume = {10},
number = {{S-1}},
pages = {4},
year = {2016},
url = {https://doi.org/10.1186/s12918-015-0247-y},
doi = {10.1186/S12918-015-0247-Y},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/ZhangCS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ZhangCZLPZ16,
author = {Fan Zhang and
Haoting Chen and
Li Na Zhao and
Hui Liu and
Teresa M. Przytycka and
Jie Zheng},
title = {Generalized logical model based on network topology to capture the
dynamical trends of cellular signaling pathways},
journal = {{BMC} Syst. Biol.},
volume = {10},
number = {{S-1}},
pages = {7},
year = {2016},
url = {https://doi.org/10.1186/s12918-015-0249-9},
doi = {10.1186/S12918-015-0249-9},
timestamp = {Wed, 30 Nov 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcsb/ZhangCZLPZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HeWP15,
author = {Dan He and
Zhanyong Wang and
Laxmi Parida},
title = {Data-driven encoding for quantitative genetic trait prediction},
journal = {{BMC} Bioinform.},
volume = {16},
number = {{S-1}},
pages = {S10},
year = {2015},
url = {https://doi.org/10.1186/1471-2105-16-s1-s10},
doi = {10.1186/1471-2105-16-S1-S10},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HeWP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuangHLW15,
author = {Guan{-}Mau Huang and
Kai{-}Yao Huang and
Tzong{-}Yi Lee and
Julia Weng},
title = {An interpretable rule-based diagnostic classification of diabetic
nephropathy among type 2 diabetes patients},
journal = {{BMC} Bioinform.},
volume = {16},
number = {{S-1}},
pages = {S5},
year = {2015},
url = {https://doi.org/10.1186/1471-2105-16-S1-S5},
doi = {10.1186/1471-2105-16-S1-S5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HuangHLW15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuangLTC15,
author = {Kai{-}Yao Huang and
Tzong{-}Yi Lee and
Yu{-}Chuan Teng and
Tzu{-}Hao Chang},
title = {ViralmiR: a support-vector-machine-based method for predicting viral
microRNA precursors},
journal = {{BMC} Bioinform.},
volume = {16},
number = {{S-1}},
pages = {S9},
year = {2015},
url = {https://doi.org/10.1186/1471-2105-16-S1-S9},
doi = {10.1186/1471-2105-16-S1-S9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HuangLTC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiWHCTH15,
author = {Yun{-}Lung Li and
Jui{-}Cheng Weng and
Chiung{-}Chih Hsiao and
Min{-}Te Chou and
Chin{-}Wen Tseng and
Jui{-}Hung Hung},
title = {{PEAT:} an intelligent and efficient paired-end sequencing adapter
trimming algorithm},
journal = {{BMC} Bioinform.},
volume = {16},
number = {{S-1}},
pages = {S2},
year = {2015},
url = {https://doi.org/10.1186/1471-2105-16-S1-S2},
doi = {10.1186/1471-2105-16-S1-S2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiWHCTH15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LinLHH15,
author = {Jau{-}Ji Lin and
Zih{-}Lin Lin and
Jenn{-}Kang Hwang and
Tsun{-}Tsao Huang},
title = {On the packing density of the unbound protein-protein interaction
interface and its implications in dynamics},
journal = {{BMC} Bioinform.},
volume = {16},
number = {{S-1}},
pages = {S7},
year = {2015},
url = {https://doi.org/10.1186/1471-2105-16-S1-S7},
doi = {10.1186/1471-2105-16-S1-S7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LinLHH15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MimoriNKSKYN15,
author = {Takahiro Mimori and
Naoki Nariai and
Kaname Kojima and
Yukuto Sato and
Yosuke Kawai and
Yumi Yamaguchi{-}Kabata and
Masao Nagasaki},
title = {Estimating copy numbers of alleles from population-scale high-throughput
sequencing data},
journal = {{BMC} Bioinform.},
volume = {16},
number = {{S-1}},
pages = {S4},
year = {2015},
url = {https://doi.org/10.1186/1471-2105-16-S1-S4},
doi = {10.1186/1471-2105-16-S1-S4},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MimoriNKSKYN15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/NguyenHHCBLWL15,
author = {Van{-}Nui Nguyen and
Kai{-}Yao Huang and
Chien{-}Hsun Huang and
Tzu{-}Hao Chang and
Neil Arvin Breta{\~{n}}a and
K. Robert Lai and
Julia Weng and
Tzong{-}Yi Lee},
title = {Characterization and identification of ubiquitin conjugation sites
with {E3} ligase recognition specificities},
journal = {{BMC} Bioinform.},
volume = {16},
number = {{S-1}},
pages = {S1},
year = {2015},
url = {https://doi.org/10.1186/1471-2105-16-S1-S1},
doi = {10.1186/1471-2105-16-S1-S1},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/NguyenHHCBLWL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SunYTL15,
author = {Hong Sun and
Shuang Yang and
Liangliang Tun and
Yixue Li},
title = {IAOseq: inferring abundance of overlapping genes using RNA-seq data},
journal = {{BMC} Bioinform.},
volume = {16},
number = {{S-1}},
pages = {S3},
year = {2015},
url = {https://doi.org/10.1186/1471-2105-16-S1-S3},
doi = {10.1186/1471-2105-16-S1-S3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SunYTL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/VasylenkoLCCHH15,
author = {Tamara Vasylenko and
Yi{-}Fan Liou and
Hong{-}An Chen and
Phasit Charoenkwan and
Hui{-}Ling Huang and
Shinn{-}Ying Ho},
title = {{SCMPSP:} Prediction and characterization of photosynthetic proteins
based on a scoring card method},
journal = {{BMC} Bioinform.},
volume = {16},
number = {{S-1}},
pages = {S8},
year = {2015},
url = {https://doi.org/10.1186/1471-2105-16-S1-S8},
doi = {10.1186/1471-2105-16-S1-S8},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/VasylenkoLCCHH15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangZLS15,
author = {Wenhui Wang and
Xianghong Jasmine Zhou and
Zhenqiu Liu and
Fengzhu Sun},
title = {Network tuned multiple rank aggregation and applications to gene ranking},
journal = {{BMC} Bioinform.},
volume = {16},
number = {{S-1}},
pages = {S6},
year = {2015},
url = {https://doi.org/10.1186/1471-2105-16-S1-S6},
doi = {10.1186/1471-2105-16-S1-S6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WangZLS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/BaiJW15,
author = {Yang Bai and
Shufan Ji and
Yadong Wang},
title = {IRcall and IRclassifier: two methods for flexible detection of intron
retention events from RNA-Seq data},
journal = {{BMC} Genom.},
volume = {16},
number = {{S-2}},
pages = {S9},
year = {2015},
url = {https://doi.org/10.1186/1471-2164-16-S2-S9},
doi = {10.1186/1471-2164-16-S2-S9},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/BaiJW15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ChienCWCHC15,
author = {Chia{-}Hung Chien and
Chi{-}Nga Chow and
Nai{-}Yun Wu and
Yi{-}Fan Chiang{-}Hsieh and
Ping{-}Fu Hou and
Wen{-}Chi Chang},
title = {EXPath: a database of comparative expression analysis inferring metabolic
pathways for plants},
journal = {{BMC} Genom.},
volume = {16},
number = {{S-2}},
pages = {S6},
year = {2015},
url = {https://doi.org/10.1186/1471-2164-16-S2-S6},
doi = {10.1186/1471-2164-16-S2-S6},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ChienCWCHC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/HsuHCSHT15,
author = {Sheng{-}Da Hsu and
Hsi{-}Yuan Huang and
Chih{-}Hung Chou and
Yi{-}Ming Sun and
Ming{-}Ta Hsu and
Ann{-}Ping Tsou},
title = {Integrated analyses to reconstruct microRNA-mediated regulatory networks
in mouse liver using high-throughput profiling},
journal = {{BMC} Genom.},
volume = {16},
number = {{S-2}},
pages = {S12},
year = {2015},
url = {https://doi.org/10.1186/1471-2164-16-S2-S12},
doi = {10.1186/1471-2164-16-S2-S12},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/HsuHCSHT15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/IchikawaM15,
author = {Kazuki Ichikawa and
Shinichi Morishita},
title = {A linear time algorithm for detecting long genomic regions enriched
with a specific combination of epigenetic states},
journal = {{BMC} Genom.},
volume = {16},
number = {{S-2}},
pages = {S8},
year = {2015},
url = {https://doi.org/10.1186/1471-2164-16-S2-S8},
doi = {10.1186/1471-2164-16-S2-S8},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/IchikawaM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/JiangWL15,
author = {Rui Jiang and
Mengmeng Wu and
Lianshuo Li},
title = {Pinpointing disease genes through phenomic and genomic data fusion},
journal = {{BMC} Genom.},
volume = {16},
number = {{S-2}},
pages = {S3},
year = {2015},
url = {https://doi.org/10.1186/1471-2164-16-S2-S3},
doi = {10.1186/1471-2164-16-S2-S3},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/JiangWL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/LiX15,
author = {Yi Li and
Xiaohui Xie},
title = {MixClone: a mixture model for inferring tumor subclonal populations},
journal = {{BMC} Genom.},
volume = {16},
number = {{S-2}},
pages = {S1},
year = {2015},
url = {https://doi.org/10.1186/1471-2164-16-S2-S1},
doi = {10.1186/1471-2164-16-S2-S1},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/LiX15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/NariaiKSMSKYYN15,
author = {Naoki Nariai and
Kaname Kojima and
Sakae Saito and
Takahiro Mimori and
Yukuto Sato and
Yosuke Kawai and
Yumi Yamaguchi{-}Kabata and
Jun Yasuda and
Masao Nagasaki},
title = {HLA-VBSeq: accurate {HLA} typing at full resolution from whole-genome
sequencing data},
journal = {{BMC} Genom.},
volume = {16},
number = {{S-2}},
pages = {S7},
year = {2015},
url = {https://doi.org/10.1186/1471-2164-16-S2-S7},
doi = {10.1186/1471-2164-16-S2-S7},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcgenomics/NariaiKSMSKYYN15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/NguyenHWNL15,
author = {Thanh{-}Tung Nguyen and
Joshua Zhexue Huang and
Qingyao Wu and
Thuy Thi Nguyen and
Mark Junjie Li},
title = {Genome-wide association data classification and SNPs selection using
two-stage quality-based Random Forests},
journal = {{BMC} Genom.},
volume = {16},
number = {{S-2}},
pages = {S5},
year = {2015},
url = {https://doi.org/10.1186/1471-2164-16-S2-S5},
doi = {10.1186/1471-2164-16-S2-S5},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/NguyenHWNL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/SongLLL15,
author = {Renhua Song and
Qian Liu and
Tao Liu and
Jinyan Li},
title = {Connecting rules from paired miRNA and mRNA expression data sets of
{HCV} patients to detect both inverse and positive regulatory relationships},
journal = {{BMC} Genom.},
volume = {16},
number = {{S-2}},
pages = {S11},
year = {2015},
url = {https://doi.org/10.1186/1471-2164-16-S2-S11},
doi = {10.1186/1471-2164-16-S2-S11},
timestamp = {Fri, 16 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/SongLLL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/TasnimMYJ015,
author = {Masruba Tasnim and
Shining Ma and
Ei{-}Wen Yang and
Tao Jiang and
Wei Li},
title = {Accurate inference of isoforms from multiple sample RNA-Seq data},
journal = {{BMC} Genom.},
volume = {16},
number = {{S-2}},
pages = {S15},
year = {2015},
url = {https://doi.org/10.1186/1471-2164-16-S2-S15},
doi = {10.1186/1471-2164-16-S2-S15},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/TasnimMYJ015.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/TsengLCZCZL15,
author = {Yu{-}Ting Tseng and
Wenyuan Li and
Ching{-}Hsien Chen and
Shi{-}Hua Zhang and
Jeremy J. W. Chen and
Xianghong Jasmine Zhou and
Chun{-}Chi Liu},
title = {{IIIDB:} a database for isoform-isoform interactions and isoform network
modules},
journal = {{BMC} Genom.},
volume = {16},
number = {{S-2}},
pages = {S10},
year = {2015},
url = {https://doi.org/10.1186/1471-2164-16-S2-S10},
doi = {10.1186/1471-2164-16-S2-S10},
timestamp = {Fri, 19 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/TsengLCZCZL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/VatsDGGBG15,
author = {Chakshu Vats and
Jaspreet Kaur Dhanjal and
Sukriti Goyal and
Ankita Gupta and
Navneeta Bharadvaja and
Abhinav Grover},
title = {Mechanistic analysis elucidating the relationship between Lys96 mutation
in Mycobacterium tuberculosis pyrazinamidase enzyme and pyrazinamide
susceptibility},
journal = {{BMC} Genom.},
volume = {16},
number = {{S-2}},
pages = {S14},
year = {2015},
url = {https://doi.org/10.1186/1471-2164-16-S2-S14},
doi = {10.1186/1471-2164-16-S2-S14},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/VatsDGGBG15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/WangSCLCTLCPC15,
author = {Hsei{-}Wei Wang and
Hsing{-}Jen Sun and
Ting{-}Yu Chang and
Hung{-}Hao Lo and
Wei{-}Chung Cheng and
George C. Tseng and
Chin{-}Teng Lin and
Shing{-}Jyh Chang and
Nikhil R. Pal and
I{-}Fang Chung},
title = {Discovering monotonic stemness marker genes from time-series stem
cell microarray data},
journal = {{BMC} Genom.},
volume = {16},
number = {{S-2}},
pages = {S2},
year = {2015},
url = {https://doi.org/10.1186/1471-2164-16-S2-S2},
doi = {10.1186/1471-2164-16-S2-S2},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/WangSCLCTLCPC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/YasudaM15,
author = {Tomohiro Yasuda and
Satoru Miyano},
title = {Inferring the global structure of chromosomes from structural variations},
journal = {{BMC} Genom.},
volume = {16},
number = {{S-2}},
pages = {S13},
year = {2015},
url = {https://doi.org/10.1186/1471-2164-16-S2-S13},
doi = {10.1186/1471-2164-16-S2-S13},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/YasudaM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ZhangLYW15,
author = {Yijia Zhang and
Hongfei Lin and
Zhihao Yang and
Jian Wang},
title = {Integrating experimental and literature protein-protein interaction
data for protein complex prediction},
journal = {{BMC} Genom.},
volume = {16},
number = {{S-2}},
pages = {S4},
year = {2015},
url = {https://doi.org/10.1186/1471-2164-16-S2-S4},
doi = {10.1186/1471-2164-16-S2-S4},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ZhangLYW15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/HsiehTCTKHN15,
author = {Wen{-}Tsong Hsieh and
Ke{-}Rung Tzeng and
Jin{-}Shuei Ciou and
Jeffrey J. P. Tsai and
Nilubon Kurubanjerdjit and
Chien{-}Hung Huang and
Ka{-}Lok Ng},
title = {Transcription factor and microRNA-regulated network motifs for cancer
and signal transduction networks},
journal = {{BMC} Syst. Biol.},
volume = {9},
number = {{S-1}},
pages = {S5},
year = {2015},
url = {https://doi.org/10.1186/1752-0509-9-S1-S5},
doi = {10.1186/1752-0509-9-S1-S5},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/HsiehTCTKHN15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/JeongKWS15,
author = {Hyun{-}hwan Jeong and
So Kim and
Kyubum Wee and
Kyung{-}Ah Sohn},
title = {Investigating the utility of clinical outcome-guided mutual information
network in network-based Cox regression},
journal = {{BMC} Syst. Biol.},
volume = {9},
number = {{S-1}},
pages = {S8},
year = {2015},
url = {https://doi.org/10.1186/1752-0509-9-S1-S8},
doi = {10.1186/1752-0509-9-S1-S8},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/JeongKWS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/JeongY15,
author = {Hyundoo Jeong and
Byung{-}Jun Yoon},
title = {Accurate multiple network alignment through context-sensitive random
walk},
journal = {{BMC} Syst. Biol.},
volume = {9},
number = {{S-1}},
pages = {S7},
year = {2015},
url = {https://doi.org/10.1186/1752-0509-9-S1-S7},
doi = {10.1186/1752-0509-9-S1-S7},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/JeongY15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/MishraBCZZ15,
author = {Shital K. Mishra and
Sourav S. Bhowmick and
Huey{-}Eng Chua and
Fan Zhang and
Jie Zheng},
title = {Computational cell fate modelling for discovery of rewiring in apoptotic
network for enhanced cancer drug sensitivity},
journal = {{BMC} Syst. Biol.},
volume = {9},
number = {{S-1}},
pages = {S4},
year = {2015},
url = {https://doi.org/10.1186/1752-0509-9-S1-S4},
doi = {10.1186/1752-0509-9-S1-S4},
timestamp = {Wed, 30 Nov 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcsb/MishraBCZZ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ShimodaSOIA15,
author = {Takehiro Shimoda and
Shuji Suzuki and
Masahito Ohue and
Takashi Ishida and
Yutaka Akiyama},
title = {Protein-protein docking on hardware accelerators: comparison of {GPU}
and {MIC} architectures},
journal = {{BMC} Syst. Biol.},
volume = {9},
number = {{S-1}},
pages = {S6},
year = {2015},
url = {https://doi.org/10.1186/1752-0509-9-S1-S6},
doi = {10.1186/1752-0509-9-S1-S6},
timestamp = {Mon, 21 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcsb/ShimodaSOIA15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/WangLLDH15,
author = {Caihua Wang and
Juan Liu and
Fei Luo and
Zixing Deng and
Qian{-}Nan Hu},
title = {Predicting target-ligand interactions using protein ligand-binding
site and ligand substructures},
journal = {{BMC} Syst. Biol.},
volume = {9},
number = {{S-1}},
pages = {S2},
year = {2015},
url = {https://doi.org/10.1186/1752-0509-9-S1-S2},
doi = {10.1186/1752-0509-9-S1-S2},
timestamp = {Tue, 21 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/WangLLDH15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/WangYPLJMY15,
author = {Likun Wang and
Luhe Yang and
Zuohan Peng and
Dan Lu and
Yan Jin and
Michael McNutt and
Yuxin Yin},
title = {cisPath: an R/Bioconductor package for cloud users for visualization
and management of functional protein interaction networks},
journal = {{BMC} Syst. Biol.},
volume = {9},
number = {{S-1}},
pages = {S1},
year = {2015},
url = {https://doi.org/10.1186/1752-0509-9-S1-S1},
doi = {10.1186/1752-0509-9-S1-S1},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/WangYPLJMY15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/WuWLYLS15,
author = {Qingyao Wu and
Zhenyu Wang and
Chunshan Li and
Yunming Ye and
Yueping Li and
Ning Sun},
title = {Protein functional properties prediction in sparsely-label {PPI} networks
through regularized non-negative matrix factorization},
journal = {{BMC} Syst. Biol.},
volume = {9},
number = {{S-1}},
pages = {S9},
year = {2015},
url = {https://doi.org/10.1186/1752-0509-9-S1-S9},
doi = {10.1186/1752-0509-9-S1-S9},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/WuWLYLS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/YuZDG15,
author = {Guo{-}Xian Yu and
Hailong Zhu and
Carlotta Domeniconi and
Maozu Guo},
title = {Integrating multiple networks for protein function prediction},
journal = {{BMC} Syst. Biol.},
volume = {9},
number = {{S-1}},
pages = {S3},
year = {2015},
url = {https://doi.org/10.1186/1752-0509-9-S1-S3},
doi = {10.1186/1752-0509-9-S1-S3},
timestamp = {Thu, 12 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcsb/YuZDG15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AsarnowS14,
author = {Daniel Asarnow and
Rahul Singh},
title = {Automatic classification of protein structures using low-dimensional
structure space mappings},
journal = {{BMC} Bioinform.},
volume = {15},
number = {{S-2}},
pages = {S1},
year = {2014},
url = {https://doi.org/10.1186/1471-2105-15-S2-S1},
doi = {10.1186/1471-2105-15-S2-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AsarnowS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JaskowiakCC14,
author = {Pablo A. Jaskowiak and
Ricardo J. G. B. Campello and
Ivan G. Costa},
title = {On the selection of appropriate distances for gene expression data
clustering},
journal = {{BMC} Bioinform.},
volume = {15},
number = {{S-2}},
pages = {S2},
year = {2014},
url = {https://doi.org/10.1186/1471-2105-15-S2-S2},
doi = {10.1186/1471-2105-15-S2-S2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JaskowiakCC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuMLCZR14,
author = {Wenting Liu and
Kui Miao and
Guangxia Li and
Kuiyu Chang and
Jie Zheng and
Jagath C. Rajapakse},
title = {Extracting rate changes in transcriptional regulation from {MEDLINE}
abstracts},
journal = {{BMC} Bioinform.},
volume = {15},
number = {{S-2}},
pages = {S4},
year = {2014},
url = {https://doi.org/10.1186/1471-2105-15-S2-S4},
doi = {10.1186/1471-2105-15-S2-S4},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuMLCZR14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuXZXWC14,
author = {Bin Liu and
Jinghao Xu and
Quan Zou and
Ruifeng Xu and
Xiaolong Wang and
Qingcai Chen},
title = {Using distances between Top-n-gram and residue pairs for protein remote
homology detection},
journal = {{BMC} Bioinform.},
volume = {15},
number = {{S-2}},
pages = {S3},
year = {2014},
url = {https://doi.org/10.1186/1471-2105-15-S2-S3},
doi = {10.1186/1471-2105-15-S2-S3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuXZXWC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PengWC14,
author = {Jiajie Peng and
Yadong Wang and
Jin Chen},
title = {Towards integrative gene functional similarity measurement},
journal = {{BMC} Bioinform.},
volume = {15},
number = {{S-2}},
pages = {S5},
year = {2014},
url = {https://doi.org/10.1186/1471-2105-15-S2-S5},
doi = {10.1186/1471-2105-15-S2-S5},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/PengWC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RuanHMA14,
author = {Peiying Ruan and
Morihiro Hayashida and
Osamu Maruyama and
Tatsuya Akutsu},
title = {Prediction of heterotrimeric protein complexes by two-phase learning
using neighboring kernels},
journal = {{BMC} Bioinform.},
volume = {15},
number = {{S-2}},
pages = {S6},
year = {2014},
url = {https://doi.org/10.1186/1471-2105-15-S2-S6},
doi = {10.1186/1471-2105-15-S2-S6},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/RuanHMA14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ShawIRH14,
author = {Dipan Lal Shaw and
A. S. M. Shohidull Islam and
M. Sohel Rahman and
Masud Hasan},
title = {Protein folding in {HP} model on hexagonal lattices with diagonals},
journal = {{BMC} Bioinform.},
volume = {15},
number = {{S-2}},
pages = {S7},
year = {2014},
url = {https://doi.org/10.1186/1471-2105-15-S2-S7},
doi = {10.1186/1471-2105-15-S2-S7},
timestamp = {Tue, 16 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ShawIRH14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WuYNHS14,
author = {Qingyao Wu and
Yunming Ye and
Michael K. Ng and
Shen{-}Shyang Ho and
Ruichao Shi},
title = {Collective prediction of protein functions from protein-protein interaction
networks},
journal = {{BMC} Bioinform.},
volume = {15},
number = {{S-2}},
pages = {S9},
year = {2014},
url = {https://doi.org/10.1186/1471-2105-15-S2-S9},
doi = {10.1186/1471-2105-15-S2-S9},
timestamp = {Wed, 03 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/WuYNHS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangWW14,
author = {Denan Zhang and
Guohua Wang and
Yadong Wang},
title = {Transcriptional regulation prediction of antiestrogen resistance in
breast cancer based on {RNA} polymerase {II} binding data},
journal = {{BMC} Bioinform.},
volume = {15},
number = {{S-2}},
pages = {S10},
year = {2014},
url = {https://doi.org/10.1186/1471-2105-15-S2-S10},
doi = {10.1186/1471-2105-15-S2-S10},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangWW14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ChengCHHTWKC14,
author = {Chia Yang Cheng and
Chia{-}Han Chu and
Hung{-}Wei Hsu and
Fang{-}Rong Hsu and
Chung Yi Tang and
Wen{-}Ching Wang and
Hsing{-}Jien Kung and
Pei{-}Ching Chang},
title = {An improved ChIP-seq peak detection system for simultaneously identifying
post-translational modified transcription factors by combinatorial
fusion, using SUMOylation as an example},
journal = {{BMC} Genom.},
volume = {15},
number = {{S-1}},
pages = {S1},
year = {2014},
url = {https://doi.org/10.1186/1471-2164-15-S1-S1},
doi = {10.1186/1471-2164-15-S1-S1},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ChengCHHTWKC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/DehzangiPLSS14,
author = {Abdollah Dehzangi and
Kuldip K. Paliwal and
James G. Lyons and
Alok Sharma and
Abdul Sattar},
title = {Proposing a highly accurate protein structural class predictor using
segmentation-based features},
journal = {{BMC} Genom.},
volume = {15},
number = {{S-1}},
pages = {S2},
year = {2014},
url = {https://doi.org/10.1186/1471-2164-15-S1-S2},
doi = {10.1186/1471-2164-15-S1-S2},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcgenomics/DehzangiPLSS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/DhanjalGSSG14,
author = {Jaspreet Kaur Dhanjal and
Sonam Grover and
Sudhanshu Sharma and
Ajeet Singh and
Abhinav Grover},
title = {Structural insights into mode of actions of novel natural Mycobacterium
protein tyrosine phosphatase {B} inhibitors},
journal = {{BMC} Genom.},
volume = {15},
number = {{S-1}},
pages = {S3},
year = {2014},
url = {https://doi.org/10.1186/1471-2164-15-S1-S3},
doi = {10.1186/1471-2164-15-S1-S3},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/DhanjalGSSG14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/FolkmanSS14,
author = {Lukas Folkman and
Bela Stantic and
Abdul Sattar},
title = {Towards sequence-based prediction of mutation-induced stability changes
in unseen non-homologous proteins},
journal = {{BMC} Genom.},
volume = {15},
number = {{S-1}},
pages = {S4},
year = {2014},
url = {https://doi.org/10.1186/1471-2164-15-S1-S4},
doi = {10.1186/1471-2164-15-S1-S4},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcgenomics/FolkmanSS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/KunduB14,
author = {Kousik Kundu and
Rolf Backofen},
title = {Cluster based prediction of PDZ-peptide interactions},
journal = {{BMC} Genom.},
volume = {15},
number = {{S-1}},
pages = {S5},
year = {2014},
url = {https://doi.org/10.1186/1471-2164-15-S1-S5},
doi = {10.1186/1471-2164-15-S1-S5},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/KunduB14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/LaiZNMLM14,
author = {Yinglei Lai and
Fanni Zhang and
Tapan K. Nayak and
Reza Modarres and
Norman H. Lee and
Timothy A. McCaffrey},
title = {Concordant integrative gene set enrichment analysis of multiple large-scale
two-sample expression data sets},
journal = {{BMC} Genom.},
volume = {15},
number = {{S-1}},
pages = {S6},
year = {2014},
url = {https://doi.org/10.1186/1471-2164-15-S1-S6},
doi = {10.1186/1471-2164-15-S1-S6},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/LaiZNMLM14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/LeHHT14,
author = {Ngoc Tu Le and
Tu Bao Ho and
Bich Hai Ho and
Dang Tran},
title = {A nucleosomal approach to inferring causal relationships of histone
modifications},
journal = {{BMC} Genom.},
volume = {15},
number = {{S-1}},
pages = {S7},
year = {2014},
url = {https://doi.org/10.1186/1471-2164-15-S1-S7},
doi = {10.1186/1471-2164-15-S1-S7},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/LeHHT14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/LiaoC14,
author = {Ben{-}Yang Liao and
Andrew Ying{-}Fei Chang},
title = {Accumulation of CTCF-binding sites drives expression divergence between
tandemly duplicated genes in humans},
journal = {{BMC} Genom.},
volume = {15},
number = {{S-1}},
pages = {S8},
year = {2014},
url = {https://doi.org/10.1186/1471-2164-15-S1-S8},
doi = {10.1186/1471-2164-15-S1-S8},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/LiaoC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/LiuSLK14,
author = {Xiaowen Liu and
Matthew W. Segar and
Shuai Cheng Li and
Sangtae Kim},
title = {Spectral probabilities of top-down tandem mass spectra},
journal = {{BMC} Genom.},
volume = {15},
number = {{S-1}},
pages = {S9},
year = {2014},
url = {https://doi.org/10.1186/1471-2164-15-S1-S9},
doi = {10.1186/1471-2164-15-S1-S9},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcgenomics/LiuSLK14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/LuLHHQ14,
author = {Meng Lu and
Hye{-}Seung Lee and
David Hadley and
Jianhua Z. Huang and
Xiaoning Qian},
title = {Supervised categorical principal component analysis for genome-wide
association analyses},
journal = {{BMC} Genom.},
volume = {15},
number = {{S-1}},
pages = {S10},
year = {2014},
url = {https://doi.org/10.1186/1471-2164-15-S1-S10},
doi = {10.1186/1471-2164-15-S1-S10},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/LuLHHQ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/WangZZXLDZZYWD14,
author = {Fu{-}Qiang Wang and
Jun Zhong and
Ying Zhao and
Jing{-}Fa Xiao and
Jing Liu and
Meng Dai and
Guizhen Zheng and
Li Zhang and
Jun Yu and
Jiayan Wu and
Baoling Duan},
title = {Genome sequencing of high-penicillin producing industrial strain of
Penicillium chrysogenum},
journal = {{BMC} Genom.},
volume = {15},
number = {{S-1}},
pages = {S11},
year = {2014},
url = {https://doi.org/10.1186/1471-2164-15-S1-S11},
doi = {10.1186/1471-2164-15-S1-S11},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcgenomics/WangZZXLDZZYWD14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/WanguYC14,
author = {Yi Wang and
Henry Chi{-}Ming Leung and
Siu{-}Ming Yiu and
Francis Y. L. Chin},
title = {MetaCluster-TA: taxonomic annotation for metagenomic data based on
assembly-assisted binning},
journal = {{BMC} Genom.},
volume = {15},
number = {{S-1}},
pages = {S12},
year = {2014},
url = {https://doi.org/10.1186/1471-2164-15-S1-S12},
doi = {10.1186/1471-2164-15-S1-S12},
timestamp = {Sun, 25 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcgenomics/WanguYC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/WeiLZLGHX14,
author = {Lin Wei and
Baofeng Lian and
Yuannv Zhang and
Wei Li and
Jianren Gu and
Xianghuo He and
Lu Xie},
title = {Application of microRNA and mRNA expression profiling on prognostic
biomarker discovery for hepatocellular carcinoma},
journal = {{BMC} Genom.},
volume = {15},
number = {{S-1}},
pages = {S13},
year = {2014},
url = {https://doi.org/10.1186/1471-2164-15-S1-S13},
doi = {10.1186/1471-2164-15-S1-S13},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcgenomics/WeiLZLGHX14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/Yoon14,
author = {Byung{-}Jun Yoon},
title = {Sequence alignment by passing messages},
journal = {{BMC} Genom.},
volume = {15},
number = {{S-1}},
pages = {S14},
year = {2014},
url = {https://doi.org/10.1186/1471-2164-15-S1-S14},
doi = {10.1186/1471-2164-15-S1-S14},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/Yoon14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/AwadC14,
author = {Sherine Awad and
Jin Chen},
title = {Inferring transcription factor collaborations in gene regulatory networks},
journal = {{BMC} Syst. Biol.},
volume = {8},
number = {{S-1}},
pages = {S1},
year = {2014},
url = {https://doi.org/10.1186/1752-0509-8-S1-S1},
doi = {10.1186/1752-0509-8-S1-S1},
timestamp = {Tue, 16 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/AwadC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ChenJZJ14,
author = {Yong Chen and
Thibault Jacquemin and
Shuyan Zhang and
Rui Jiang},
title = {Prioritizing protein complexes implicated in human diseases by network
optimization},
journal = {{BMC} Syst. Biol.},
volume = {8},
number = {{S-1}},
pages = {S2},
year = {2014},
url = {https://doi.org/10.1186/1752-0509-8-S1-S2},
doi = {10.1186/1752-0509-8-S1-S2},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/ChenJZJ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/GongWC14,
author = {Haijun Gong and
Tong Tong Wu and
Edmund M. Clarke},
title = {Pathway-gene identification for pancreatic cancer survival via doubly
regularized Cox regression},
journal = {{BMC} Syst. Biol.},
volume = {8},
number = {{S-1}},
pages = {S3},
year = {2014},
url = {https://doi.org/10.1186/1752-0509-8-S1-S3},
doi = {10.1186/1752-0509-8-S1-S3},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/GongWC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/KinoshitaIUT14,
author = {Ryoichi Kinoshita and
Mitsuo Iwadate and
Hideaki Umeyama and
Y{-}h. Taguchi},
title = {Genes associated with genotype-specific {DNA} methylation in squamous
cell carcinoma as candidate drug targets},
journal = {{BMC} Syst. Biol.},
volume = {8},
number = {{S-1}},
pages = {S4},
year = {2014},
url = {https://doi.org/10.1186/1752-0509-8-S1-S4},
doi = {10.1186/1752-0509-8-S1-S4},
timestamp = {Tue, 16 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/KinoshitaIUT14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/LiuWLWZSWQZ14,
author = {Hui Liu and
Tongtong Wang and
Hongbo Liu and
Yanjun Wei and
Guofeng Zhao and
Jianzhong Su and
Qiong Wu and
Hong Qiao and
Yan Zhang},
title = {Detection of type 2 diabetes related modules and genes based on epigenetic
networks},
journal = {{BMC} Syst. Biol.},
volume = {8},
number = {{S-1}},
pages = {S5},
year = {2014},
url = {https://doi.org/10.1186/1752-0509-8-S1-S5},
doi = {10.1186/1752-0509-8-S1-S5},
timestamp = {Thu, 15 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/LiuWLWZSWQZ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/QianBMS14,
author = {Yu Qian and
S{\o}ren Besenbacher and
Thomas Mailund and
Mikkel Heide Schierup},
title = {Identifying disease associated genes by network propagation},
journal = {{BMC} Syst. Biol.},
volume = {8},
number = {{S-1}},
pages = {S6},
year = {2014},
url = {https://doi.org/10.1186/1752-0509-8-S1-S6},
doi = {10.1186/1752-0509-8-S1-S6},
timestamp = {Tue, 16 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/QianBMS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/QiuTCA14,
author = {Yushan Qiu and
Takeyuki Tamura and
Wai{-}Ki Ching and
Tatsuya Akutsu},
title = {On control of singleton attractors in multiple Boolean networks: integer
programming-based method},
journal = {{BMC} Syst. Biol.},
volume = {8},
number = {{S-1}},
pages = {S7},
year = {2014},
url = {https://doi.org/10.1186/1752-0509-8-S1-S7},
doi = {10.1186/1752-0509-8-S1-S7},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/QiuTCA14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/TianS14,
author = {Tianhai Tian and
Kate Smith{-}Miles},
title = {Mathematical modeling of GATA-switching for regulating the differentiation
of hematopoietic stem cell},
journal = {{BMC} Syst. Biol.},
volume = {8},
number = {{S-1}},
pages = {S8},
year = {2014},
url = {https://doi.org/10.1186/1752-0509-8-S1-S8},
doi = {10.1186/1752-0509-8-S1-S8},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/TianS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/WangQ14,
author = {Yijie Wang and
Xiaoning Qian},
title = {Joint clustering of protein interaction networks through Markov random
walk},
journal = {{BMC} Syst. Biol.},
volume = {8},
number = {{S-1}},
pages = {S9},
year = {2014},
url = {https://doi.org/10.1186/1752-0509-8-S1-S9},
doi = {10.1186/1752-0509-8-S1-S9},
timestamp = {Mon, 01 Mar 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcsb/WangQ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/XiZWW14,
author = {Yanping Xi and
Yue Zhao and
Li Wang and
Fei Wang},
title = {Comparison on extreme pathways reveals nature of different biological
processes},
journal = {{BMC} Syst. Biol.},
volume = {8},
number = {{S-1}},
pages = {S10},
year = {2014},
url = {https://doi.org/10.1186/1752-0509-8-S1-S10},
doi = {10.1186/1752-0509-8-S1-S10},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/XiZWW14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AchawanantakunS13,
author = {Rujira Achawanantakun and
Yanni Sun},
title = {Shape and secondary structure prediction for ncRNAs including pseudoknots
based on linear {SVM}},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S1},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S1},
doi = {10.1186/1471-2105-14-S2-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AchawanantakunS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AmarasingheLH13,
author = {Kaushalya C. Amarasinghe and
Jason Li and
Saman K. Halgamuge},
title = {CoNVEX: copy number variation estimation in exome sequencing data
using {HMM}},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S2},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S2},
doi = {10.1186/1471-2105-14-S2-S2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AmarasingheLH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AmarasingheLH13a,
author = {Kaushalya C. Amarasinghe and
Jason Li and
Saman K. Halgamuge},
title = {Correction: CoNVEX: copy number variation estimation in exome sequencing
data using {HMM}},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S26},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S26},
doi = {10.1186/1471-2105-14-S2-S26},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AmarasingheLH13a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CarlTH13,
author = {Joseph W. Carl and
Joanne Trgovcich and
Sridhar Hannenhalli},
title = {Widespread evidence of viral miRNAs targeting host pathways},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S3},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S3},
doi = {10.1186/1471-2105-14-S2-S3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CarlTH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChangHHWHH13,
author = {Tzu{-}Hao Chang and
Hsi{-}Yuan Huang and
Justin Bo{-}Kai Hsu and
Shun{-}Long Weng and
Jorng{-}Tzong Horng and
Hsien{-}Da Huang},
title = {An enhanced computational platform for investigating the roles of
regulatory {RNA} and for identifying functional {RNA} motifs},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S4},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S4},
doi = {10.1186/1471-2105-14-S2-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChangHHWHH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenLC13,
author = {Chi{-}Wei Chen and
Jerome Lin and
Yen{-}Wei Chu},
title = {iStable: off-the-shelf predictor integration for predicting protein
stability changes},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S5},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S5},
doi = {10.1186/1471-2105-14-S2-S5},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenLC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FolkmanSS13,
author = {Lukas Folkman and
Bela Stantic and
Abdul Sattar},
title = {Sequence-only evolutionary and predicted structural features for the
prediction of stability changes in protein mutants},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S6},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S6},
doi = {10.1186/1471-2105-14-S2-S6},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FolkmanSS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GaireSHBSH13,
author = {Raj K. Gaire and
Lorey Smith and
Patrick Humbert and
James Bailey and
Peter J. Stuckey and
Izhak Haviv},
title = {Discovery and analysis of consistent active sub-networks in cancers},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S7},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S7},
doi = {10.1186/1471-2105-14-S2-S7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GaireSHBSH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GuCMPCG13,
author = {Chen Gu and
Huang{-}Wei Chang and
Lutz Maibaum and
Vijay S. Pande and
Gunnar E. Carlsson and
Leonidas J. Guibas},
title = {Building Markov state models with solvent dynamics},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S8},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S8},
doi = {10.1186/1471-2105-14-S2-S8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GuCMPCG13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HoGD13,
author = {Eric S. Ho and
Samuel I. Gunderson and
Siobain Duffy},
title = {A multispecies polyadenylation site model},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S9},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S9},
doi = {10.1186/1471-2105-14-S2-S9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HoGD13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LinCLY13,
author = {Chun{-}Yu Lin and
Yung{-}Chiang Chen and
Yu{-}Shu Lo and
Jinn{-}Moon Yang},
title = {Inferring homologous protein-protein interactions through pair position
specific scoring matrix},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S11},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S11},
doi = {10.1186/1471-2105-14-S2-S11},
timestamp = {Thu, 05 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LinCLY13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LinCS13,
author = {Scott Lin and
Cheng{-}Wei Cheng and
Emily Chia{-}Yu Su},
title = {Prediction of B-cell epitopes using evolutionary information and propensity
scales},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S10},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S10},
doi = {10.1186/1471-2105-14-S2-S10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LinCS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MaLLTBL13,
author = {Cheng{-}Yu Ma and
Shu{-}Hsi Lin and
Chi{-}Ching Lee and
Chuan Yi Tang and
Bonnie Berger and
Chung{-}Shou Liao},
title = {Reconstruction of phyletic trees by global alignment of multiple metabolic
networks},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S12},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S12},
doi = {10.1186/1471-2105-14-S2-S12},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MaLLTBL13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MeydanOS13,
author = {Cem Meydan and
Hasan H. Otu and
Osman Ugur Sezerman},
title = {Prediction of peptides binding to {MHC} class {I} and {II} alleles
by temporal motif mining},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S13},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S13},
doi = {10.1186/1471-2105-14-S2-S13},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/MeydanOS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PengCW13,
author = {Jiajie Peng and
Jin Chen and
Yadong Wang},
title = {Identifying cross-category relations in gene ontology and constructing
genome-specific term association networks},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S15},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S15},
doi = {10.1186/1471-2105-14-S2-S15},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/PengCW13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RashidNHSPS13,
author = {Mahmood A. Rashid and
M. A. Hakim Newton and
Tamjidul Hoque and
Swakkhar Shatabda and
Duc Nghia Pham and
Abdul Sattar},
title = {Spiral search: a hydrophobic-core directed local search for simplified
{PSP} on 3D {FCC} lattice},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S16},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S16},
doi = {10.1186/1471-2105-14-S2-S16},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RashidNHSPS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RenZQ13,
author = {Shaogang Ren and
Bo Zeng and
Xiaoning Qian},
title = {Adaptive bi-level programming for optimal gene knockouts for targeted
overproduction under phenotypic constraints},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S17},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S17},
doi = {10.1186/1471-2105-14-S2-S17},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RenZQ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SandBFPM13,
author = {Andreas Sand and
Gerth St{\o}lting Brodal and
Rolf Fagerberg and
Christian N. S. Pedersen and
Thomas Mailund},
title = {A practical O(n log\({}^{\mbox{2 }}\) n) time algorithm for computing
the triplet distance on binary trees},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S18},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S18},
doi = {10.1186/1471-2105-14-S2-S18},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SandBFPM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ShatabdaNRPS13,
author = {Swakkhar Shatabda and
M. A. Hakim Newton and
Mahmood A. Rashid and
Duc Nghia Pham and
Abdul Sattar},
title = {The road not taken: retreat and diverge in local search for simplified
protein structure prediction},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S19},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S19},
doi = {10.1186/1471-2105-14-S2-S19},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ShatabdaNRPS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SinghM13,
author = {Rahul Singh and
William Murad},
title = {Protein disulfide topology determination through the fusion of mass
spectrometric analysis and sequence-based prediction using Dempster-Shafer
theory},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S20},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S20},
doi = {10.1186/1471-2105-14-S2-S20},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SinghM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SuSK13,
author = {Chinh T. T. Su and
Christian Sch{\"{o}}nbach and
Chee Keong Kwoh},
title = {Molecular docking analysis of 2009-H1N1 and 2004-H5N1 influenza virus
HLA-B*4405-restricted {HA} epitope candidates: implications for {TCR}
cross-recognition and vaccine development},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S21},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S21},
doi = {10.1186/1471-2105-14-S2-S21},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SuSK13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SukosdKANKP13,
author = {Zsuzsanna S{\"{u}}k{\"{o}}sd and
Bjarne Knudsen and
James W. J. Anderson and
{\'{A}}d{\'{a}}m Nov{\'{a}}k and
J{\o}rgen Kjems and
Christian N. S. Pedersen},
title = {Characterising {RNA} secondary structure space using information entropy},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S22},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S22},
doi = {10.1186/1471-2105-14-S2-S22},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SukosdKANKP13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/VinhCCGW13,
author = {Xuan Vinh Nguyen and
Madhu Chetty and
Ross L. Coppel and
Sandeep Gaudana and
Pramod P. Wangikar},
title = {A model of the circadian clock in the cyanobacterium Cyanothece sp.
{ATCC} 51142},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S14},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S14},
doi = {10.1186/1471-2105-14-S2-S14},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/VinhCCGW13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangQ13,
author = {Yijie Wang and
Xiaoning Qian},
title = {A novel subgradient-based optimization algorithm for blockmodel functional
module identification},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S23},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S23},
doi = {10.1186/1471-2105-14-S2-S23},
timestamp = {Mon, 01 Mar 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WangQ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangW13,
author = {Penghao Wang and
Susan R. Wilson},
title = {Mass spectrometry-based protein identification by integrating de novo
sequencing with database searching},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S24},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S24},
doi = {10.1186/1471-2105-14-S2-S24},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/WangW13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YuanS13,
author = {Cheng Yuan and
Yanni Sun},
title = {Efficient known ncRNA search including pseudoknots},
journal = {{BMC} Bioinform.},
volume = {14},
number = {{S-2}},
pages = {S25},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-S2-S25},
doi = {10.1186/1471-2105-14-S2-S25},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YuanS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ChenS13,
author = {Quan Chen and
Fengzhu Sun},
title = {A unified approach for allele frequency estimation, {SNP} detection
and association studies based on pooled sequencing data using {EM}
algorithms},
journal = {{BMC} Genom.},
volume = {14},
number = {{S-1}},
pages = {S1},
year = {2013},
url = {https://doi.org/10.1186/1471-2164-14-S1-S1},
doi = {10.1186/1471-2164-14-S1-S1},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ChenS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ChouLCHCWSHHH13,
author = {Chih{-}Hung Chou and
Feng{-}Mao Lin and
Min{-}Te Chou and
Sheng{-}Da Hsu and
Tzu{-}Hao Chang and
Shun{-}Long Weng and
Sirjana Shrestha and
Chiung{-}Chih Hsiao and
Jui{-}Hung Hung and
Hsien{-}Da Huang},
title = {A computational approach for identifying microRNA-target interactions
using high-throughput {CLIP} and {PAR-CLIP} sequencing},
journal = {{BMC} Genom.},
volume = {14},
number = {{S-1}},
pages = {S2},
year = {2013},
url = {https://doi.org/10.1186/1471-2164-14-S1-S2},
doi = {10.1186/1471-2164-14-S1-S2},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ChouLCHCWSHHH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/DurnoHKH13,
author = {W. Evan Durno and
Niels W. Hanson and
Kishori M. Konwar and
Steven J. Hallam},
title = {Expanding the boundaries of local similarity analysis},
journal = {{BMC} Genom.},
volume = {14},
number = {{S-1}},
pages = {S3},
year = {2013},
url = {https://doi.org/10.1186/1471-2164-14-S1-S3},
doi = {10.1186/1471-2164-14-S1-S3},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/DurnoHKH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/GaoZR13,
author = {Zhen Gao and
Ruizhe Zhao and
Jianhua Ruan},
title = {A genome-wide cis-regulatory element discovery method based on promoter
sequences and gene co-expression networks},
journal = {{BMC} Genom.},
volume = {14},
number = {{S-1}},
pages = {S4},
year = {2013},
url = {https://doi.org/10.1186/1471-2164-14-S1-S4},
doi = {10.1186/1471-2164-14-S1-S4},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/GaoZR13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/JoshiVWLXN13,
author = {Trupti Joshi and
Babu Valliyodan and
Jeng{-}Hung Wu and
Suk{-}Ha Lee and
Dong Xu and
Henry T. Nguyen},
title = {Genomic differences between cultivated soybean, G. max and its wild
relative G. soja},
journal = {{BMC} Genom.},
volume = {14},
number = {{S-1}},
pages = {S5},
year = {2013},
url = {https://doi.org/10.1186/1471-2164-14-S1-S5},
doi = {10.1186/1471-2164-14-S1-S5},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/JoshiVWLXN13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/LeeHCKWK13,
author = {Minho Lee and
Sangjo Han and
Hyeshik Chang and
Youn{-}Sig Kwak and
David M. Weller and
Dongsup Kim},
title = {FitSearch: a robust way to interpret a yeast fitness profile in terms
of drug's mode-of-action},
journal = {{BMC} Genom.},
volume = {14},
number = {{S-1}},
pages = {S6},
year = {2013},
url = {https://doi.org/10.1186/1471-2164-14-S1-S6},
doi = {10.1186/1471-2164-14-S1-S6},
timestamp = {Thu, 05 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/LeeHCKWK13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/NikolenkoKA13,
author = {Sergey I. Nikolenko and
Anton I. Korobeynikov and
Max A. Alekseyev},
title = {BayesHammer: Bayesian clustering for error correction in single-cell
sequencing},
journal = {{BMC} Genom.},
volume = {14},
number = {{S-1}},
pages = {S7},
year = {2013},
url = {https://doi.org/10.1186/1471-2164-14-S1-S7},
doi = {10.1186/1471-2164-14-S1-S7},
timestamp = {Wed, 04 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcgenomics/NikolenkoKA13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ParrishSE13,
author = {Nathaniel Parrish and
Benjamin Sudakov and
Eleazar Eskin},
title = {Genome reassembly with high-throughput sequencing data},
journal = {{BMC} Genom.},
volume = {14},
number = {{S-1}},
pages = {S8},
year = {2013},
url = {https://doi.org/10.1186/1471-2164-14-S1-S8},
doi = {10.1186/1471-2164-14-S1-S8},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ParrishSE13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/PatrickBLY13,
author = {Ellis Patrick and
Michael J. Buckley and
David M. Lin and
Yee Hwa Yang},
title = {Improved moderation for gene-wise variance estimation in RNA-Seq via
the exploitation of external information},
journal = {{BMC} Genom.},
volume = {14},
number = {{S-1}},
pages = {S9},
year = {2013},
url = {https://doi.org/10.1186/1471-2164-14-S1-S9},
doi = {10.1186/1471-2164-14-S1-S9},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/PatrickBLY13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/UtroPP13,
author = {Filippo Utro and
Marc Pybus and
Laxmi Parida},
title = {Sum of parts is greater than the whole: inference of common genetic
history of populations},
journal = {{BMC} Genom.},
volume = {14},
number = {{S-1}},
pages = {S10},
year = {2013},
url = {https://doi.org/10.1186/1471-2164-14-S1-S10},
doi = {10.1186/1471-2164-14-S1-S10},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/UtroPP13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/WangZCYZ13,
author = {Jiayin Wang and
Zhongmeng Zhao and
Zhi Cao and
Aiyuan Yang and
Jin Zhang},
title = {A probabilistic method for identifying rare variants underlying complex
traits},
journal = {{BMC} Genom.},
volume = {14},
number = {{S-1}},
pages = {S11},
year = {2013},
url = {https://doi.org/10.1186/1471-2164-14-S1-S11},
doi = {10.1186/1471-2164-14-S1-S11},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcgenomics/WangZCYZ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/Wittler13,
author = {Roland Wittler},
title = {Unraveling overlapping deletions by agglomerative clustering},
journal = {{BMC} Genom.},
volume = {14},
number = {{S-1}},
pages = {S12},
year = {2013},
url = {https://doi.org/10.1186/1471-2164-14-S1-S12},
doi = {10.1186/1471-2164-14-S1-S12},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/Wittler13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/Wittler13a,
author = {Roland Wittler},
title = {Correction: Unraveling overlapping deletions by agglomerative clustering},
journal = {{BMC} Genom.},
volume = {14},
number = {{S-1}},
pages = {S16},
year = {2013},
url = {https://doi.org/10.1186/1471-2164-14-S1-S16},
doi = {10.1186/1471-2164-14-S1-S16},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/Wittler13a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/XinLHYMA13,
author = {Hongyi Xin and
Donghyuk Lee and
Farhad Hormozdiari and
Samihan Yedkar and
Onur Mutlu and
Can Alkan},
title = {Accelerating read mapping with FastHASH},
journal = {{BMC} Genom.},
volume = {14},
number = {{S-1}},
pages = {S13},
year = {2013},
url = {https://doi.org/10.1186/1471-2164-14-S1-S13},
doi = {10.1186/1471-2164-14-S1-S13},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/XinLHYMA13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ZareHGB13,
author = {Habil Zare and
Gholamreza Haffari and
Arvind Gupta and
Ryan Remy Brinkman},
title = {Scoring relevancy of features based on combinatorial analysis of Lasso
with application to lymphoma diagnosis},
journal = {{BMC} Genom.},
volume = {14},
number = {{S-1}},
pages = {S14},
year = {2013},
url = {https://doi.org/10.1186/1471-2164-14-S1-S14},
doi = {10.1186/1471-2164-14-S1-S14},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ZareHGB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ZengH13,
author = {Jia Zeng and
Sridhar Hannenhalli},
title = {Inferring evolution of gene duplicates using probabilistic models
and nonparametric belief propagation},
journal = {{BMC} Genom.},
volume = {14},
number = {{S-1}},
pages = {S15},
year = {2013},
url = {https://doi.org/10.1186/1471-2164-14-S1-S15},
doi = {10.1186/1471-2164-14-S1-S15},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ZengH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ChangWF12,
author = {Darby Tien{-}Hao Chang and
Chi{-}Yeh Wu and
Chen{-}Yu Fan},
title = {A study on promoter characteristics of head-to-head genes in Saccharomyces
cerevisiae},
journal = {{BMC} Genom.},
volume = {13},
number = {{S-1}},
pages = {S11},
year = {2012},
url = {https://doi.org/10.1186/1471-2164-13-S1-S11},
doi = {10.1186/1471-2164-13-S1-S11},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ChangWF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ChenB12,
author = {Yi{-}Ping Phoebe Chen and
Peer Bork},
title = {The Tenth Asia Pacific Bioinformatics Conference {(APBC} 2012)},
journal = {{BMC} Genom.},
volume = {13},
number = {{S-1}},
pages = {I1},
year = {2012},
url = {https://doi.org/10.1186/1471-2164-13-S1-I1},
doi = {10.1186/1471-2164-13-S1-I1},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ChenB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/FuL12,
author = {Gloria C.{-}L. Fu and
Wen{-}Chang Lin},
title = {Identification of gene-oriented exon orthology between human and mouse},
journal = {{BMC} Genom.},
volume = {13},
number = {{S-1}},
pages = {S10},
year = {2012},
url = {https://doi.org/10.1186/1471-2164-13-S1-S10},
doi = {10.1186/1471-2164-13-S1-S10},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/FuL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/JoshiPFLYCWLBVWCSNX12,
author = {Trupti Joshi and
Kapil Patil and
Michael R. Fitzpatrick and
D. Franklin Levi and
Qiuming Yao and
Jeffrey R. Cook and
Zheng Wang and
Marc Libault and
Laurent Brechenmacher and
Babu Valliyodan and
Xiaolei Wu and
Jianlin Cheng and
Gary Stacey and
Henry T. Nguyen and
Dong Xu},
title = {Soybean Knowledge Base (SoyKB): a web resource for soybean translational
genomics},
journal = {{BMC} Genom.},
volume = {13},
number = {{S-1}},
pages = {S15},
year = {2012},
url = {https://doi.org/10.1186/1471-2164-13-S1-S15},
doi = {10.1186/1471-2164-13-S1-S15},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/JoshiPFLYCWLBVWCSNX12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/KojimaIYFYGM12,
author = {Kaname Kojima and
Seiya Imoto and
Rui Yamaguchi and
Andr{\'{e}} Fujita and
Mai Yamauchi and
Noriko Gotoh and
Satoru Miyano},
title = {Identifying regulational alterations in gene regulatory networks by
state space representation of vector autoregressive models and variational
annealing},
journal = {{BMC} Genom.},
volume = {13},
number = {{S-1}},
pages = {S6},
year = {2012},
url = {https://doi.org/10.1186/1471-2164-13-S1-S6},
doi = {10.1186/1471-2164-13-S1-S6},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/KojimaIYFYGM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/LeeCHCS12,
author = {Tzong{-}Yi Lee and
Wen{-}Chi Chang and
Justin Bo{-}Kai Hsu and
Tzu{-}Hao Chang and
Dray{-}Ming Shien},
title = {GPMiner: an integrated system for mining combinatorial cis-regulatory
elements in mammalian gene group},
journal = {{BMC} Genom.},
volume = {13},
number = {{S-1}},
pages = {S3},
year = {2012},
url = {https://doi.org/10.1186/1471-2164-13-S1-S3},
doi = {10.1186/1471-2164-13-S1-S3},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/LeeCHCS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/LeeMSSACACS12,
author = {Hyokyeong Lee and
Asher Moody{-}Davis and
Utsab Saha and
Brian M. Suzuki and
Daniel Asarnow and
Steven Chen and
Michelle Arkin and
Conor R. Caffrey and
Rahul Singh},
title = {Quantification and clustering of phenotypic screening data using time-series
analysis for chemotherapy of schistosomiasis},
journal = {{BMC} Genom.},
volume = {13},
number = {{S-1}},
pages = {S4},
year = {2012},
url = {https://doi.org/10.1186/1471-2164-13-S1-S4},
doi = {10.1186/1471-2164-13-S1-S4},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/LeeMSSACACS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/LeiDWXLMZ12,
author = {Guo{-}Qing Lei and
Yong Dou and
Wen Wan and
Fei Xia and
Rongchun Li and
Meng Ma and
Dan Zou},
title = {{CPU-GPU} hybrid accelerating the Zuker algorithm for {RNA} secondary
structure prediction applications},
journal = {{BMC} Genom.},
volume = {13},
number = {{S-1}},
pages = {S14},
year = {2012},
url = {https://doi.org/10.1186/1471-2164-13-S1-S14},
doi = {10.1186/1471-2164-13-S1-S14},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/LeiDWXLMZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/LiLHTLL12,
author = {Sung{-}Chou Li and
Yu{-}Lun Liao and
Meng{-}Ru Ho and
Kuo{-}Wang Tsai and
Chun{-}Hung Lai and
Wen{-}Chang Lin},
title = {miRNA arm selection and isomiR distribution in gastric cancer},
journal = {{BMC} Genom.},
volume = {13},
number = {{S-1}},
pages = {S13},
year = {2012},
url = {https://doi.org/10.1186/1471-2164-13-S1-S13},
doi = {10.1186/1471-2164-13-S1-S13},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/LiLHTLL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/MysickovaV12,
author = {Alena Mysickov{\'{a}} and
Martin Vingron},
title = {Detection of interacting transcription factors in human tissues using
predicted {DNA} binding affinity},
journal = {{BMC} Genom.},
volume = {13},
number = {{S-1}},
pages = {S2},
year = {2012},
url = {https://doi.org/10.1186/1471-2164-13-S1-S2},
doi = {10.1186/1471-2164-13-S1-S2},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/MysickovaV12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/OsmanbeyogluHOL12,
author = {Hatice U. Osmanbeyoglu and
Ryan J. Hartmaier and
Steffi Oesterreich and
Xinghua Lu},
title = {Improving ChIP-seq peak-calling for functional co-regulator binding
by integrating multiple sources of biological information},
journal = {{BMC} Genom.},
volume = {13},
number = {{S-1}},
pages = {S1},
year = {2012},
url = {https://doi.org/10.1186/1471-2164-13-S1-S1},
doi = {10.1186/1471-2164-13-S1-S1},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/OsmanbeyogluHOL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/RazavianKL12,
author = {Narges Razavian and
Hetunandan Kamisetty and
Christopher James Langmead},
title = {Learning generative models of molecular dynamics},
journal = {{BMC} Genom.},
volume = {13},
number = {{S-1}},
pages = {S5},
year = {2012},
url = {https://doi.org/10.1186/1471-2164-13-S1-S5},
doi = {10.1186/1471-2164-13-S1-S5},
timestamp = {Wed, 19 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/RazavianKL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/SankoffZW12,
author = {David Sankoff and
Chunfang Zheng and
Baoyong Wang},
title = {A model for biased fractionation after whole genome duplication},
journal = {{BMC} Genom.},
volume = {13},
number = {{S-1}},
pages = {S8},
year = {2012},
url = {https://doi.org/10.1186/1471-2164-13-S1-S8},
doi = {10.1186/1471-2164-13-S1-S8},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/SankoffZW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/WangLCLYCL12,
author = {Nai{-}Jyuan Wang and
Chi{-}Ching Lee and
Chao{-}Sheng Cheng and
Wei{-}Cheng Lo and
Ya{-}Fen Yang and
Ming{-}Nan Chen and
Ping{-}Chiang Lyu},
title = {Construction and analysis of a plant non-specific lipid transfer protein
database (nsLTPDB)},
journal = {{BMC} Genom.},
volume = {13},
number = {{S-1}},
pages = {S9},
year = {2012},
url = {https://doi.org/10.1186/1471-2164-13-S1-S9},
doi = {10.1186/1471-2164-13-S1-S9},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcgenomics/WangLCLYCL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/WatanabeSTM12,
author = {Yukito Watanabe and
Shigeto Seno and
Yoichi Takenaka and
Hideo Matsuda},
title = {An estimation method for inference of gene regulatory net-work using
Bayesian network with uniting of partial problems},
journal = {{BMC} Genom.},
volume = {13},
number = {{S-1}},
pages = {S12},
year = {2012},
url = {https://doi.org/10.1186/1471-2164-13-S1-S12},
doi = {10.1186/1471-2164-13-S1-S12},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/WatanabeSTM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcgenomics/ZhangHT12,
author = {Yiwei Zhang and
Fei Hu and
Jijun Tang},
title = {A mixture framework for inferring ancestral gene orders},
journal = {{BMC} Genom.},
volume = {13},
number = {{S-1}},
pages = {S7},
year = {2012},
url = {https://doi.org/10.1186/1471-2164-13-S1-S7},
doi = {10.1186/1471-2164-13-S1-S7},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcgenomics/ZhangHT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/0002BFE11,
author = {Wen{-}Chieh Chang and
J. Gordon Burleigh and
David Fern{\'{a}}ndez{-}Baca and
Oliver Eulenstein},
title = {An {ILP} solution for the gene duplication problem},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S14},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S14},
doi = {10.1186/1471-2105-12-S1-S14},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/0002BFE11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BoucherM11,
author = {Christina Boucher and
Bin Ma},
title = {Closest string with outliers},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S55},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S55},
doi = {10.1186/1471-2105-12-S1-S55},
timestamp = {Wed, 15 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BoucherM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChangLA11,
author = {Che{-}Wei Chang and
Ping{-}Chiang Lyu and
Masanori Arita},
title = {Reconstructing phylogeny from metabolic substrate-product relationships},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S27},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S27},
doi = {10.1186/1471-2105-12-S1-S27},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChangLA11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenC11,
author = {Yi{-}Ping Chen and
Kwang{-}Hyun Cho},
title = {The Ninth Asia Pacific Bioinformatics Conference {(APBC2011)}},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {I1},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-I1},
doi = {10.1186/1471-2105-12-S1-I1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenCFJH11,
author = {Cho{-}Yi Chen and
Shui{-}Tein Chen and
Chiou{-}Shann Fuh and
Hsueh{-}Fen Juan and
Hsuan{-}Cheng Huang},
title = {Coregulation of transcription factors and microRNAs in human transcriptional
regulatory network},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S41},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S41},
doi = {10.1186/1471-2105-12-S1-S41},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenCFJH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenMLX11,
author = {Yong Chen and
Fenglou Mao and
Guojun Li and
Ying Xu},
title = {Genome-wide discovery of missing genes in biological pathways of prokaryotes},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S1},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S1},
doi = {10.1186/1471-2105-12-S1-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenMLX11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChikalovYML11,
author = {Igor Chikalov and
Peggy Yao and
Mikhail Moshkov and
Jean{-}Claude Latombe},
title = {Learning probabilistic models of hydrogen bond stability from molecular
dynamics simulation trajectories},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S34},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S34},
doi = {10.1186/1471-2105-12-S1-S34},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChikalovYML11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CostaRRC11,
author = {Ivan G. Costa and
Helge G. Roider and
Tha{\'{\i}}s Gaudencio do R{\^{e}}go and
Francisco de A. T. de Carvalho},
title = {Predicting gene expression in {T} cell differentiation from histone
modifications and transcription factor binding affinities by linear
mixture models},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S29},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S29},
doi = {10.1186/1471-2105-12-S1-S29},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/CostaRRC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DuitamaKDHWM11,
author = {Jorge Duitama and
Justin Kennedy and
Sanjiv Dinakar and
Y{\"{o}}zen Hern{\'{a}}ndez and
Yufeng Wu and
Ion I. Mandoiu},
title = {Linkage disequilibrium based genotype calling from low-coverage shotgun
sequencing reads},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S53},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S53},
doi = {10.1186/1471-2105-12-S1-S53},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DuitamaKDHWM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FukagawaTTTA11,
author = {Daiji Fukagawa and
Takeyuki Tamura and
Atsuhiro Takasu and
Etsuji Tomita and
Tatsuya Akutsu},
title = {A clique-based method for the edit distance between unordered trees
and its application to analysis of glycan structures},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S13},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S13},
doi = {10.1186/1471-2105-12-S1-S13},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/FukagawaTTTA11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GoreckiBE11,
author = {Pawel G{\'{o}}recki and
J. Gordon Burleigh and
Oliver Eulenstein},
title = {Maximum likelihood models and algorithms for gene tree evolution with
duplications and losses},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S15},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S15},
doi = {10.1186/1471-2105-12-S1-S15},
timestamp = {Fri, 17 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/GoreckiBE11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GroverSAPBBS11,
author = {Abhinav Grover and
Ashutosh Shandilya and
Vibhuti Agrawal and
Piyush Pratik and
Divya Bhasme and
Virendra S. Bisaria and
Durai Sundar},
title = {Hsp90/Cdc37 Chaperone/co-chaperone complex, a novel junction anticancer
target elucidated by the mode of action of herbal drug Withaferin
{A}},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S30},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S30},
doi = {10.1186/1471-2105-12-S1-S30},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/GroverSAPBBS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HanL11,
author = {Henry Han and
Xiaoli Li},
title = {Multi-resolution independent component analysis for high-performance
tumor classification and biomarker discovery},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S7},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S7},
doi = {10.1186/1471-2105-12-S1-S7},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HanL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HeYGLY11,
author = {Zengyou He and
Can Yang and
Guangyu Guo and
Ning Li and
Weichuan Yu},
title = {Motif-All: discovering all phosphorylation motifs},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S22},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S22},
doi = {10.1186/1471-2105-12-S1-S22},
timestamp = {Mon, 23 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HeYGLY11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HeZY11,
author = {Zengyou He and
Hongyu Zhao and
Weichuan Yu},
title = {Score regularization for peptide identification},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S2},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S2},
doi = {10.1186/1471-2105-12-S1-S2},
timestamp = {Thu, 28 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HeZY11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HsuCLY11,
author = {Kai{-}Cheng Hsu and
Yen{-}Fu Chen and
Shen{-}Rong Lin and
Jinn{-}Moon Yang},
title = {iGEMDOCK: a graphical environment of enhancing {GEMDOCK} using pharmacological
interactions and post-screening analysis},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S33},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S33},
doi = {10.1186/1471-2105-12-S1-S33},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HsuCLY11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuangLLTHHHH11,
author = {Hui{-}Ling Huang and
I{-}Che Lin and
Yi{-}Fan Liou and
Chia{-}Ta Tsai and
Kai{-}Ti Hsu and
Wen{-}Lin Huang and
Shinn{-}Jang Ho and
Shinn{-}Ying Ho},
title = {Predicting and analyzing DNA-binding domains using a systematic approach
to identifying a set of informative physicochemical and biochemical
properties},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S47},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S47},
doi = {10.1186/1471-2105-12-S1-S47},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HuangLLTHHHH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuangY11,
author = {Jhang{-}Wei Huang and
Jinn{-}Moon Yang},
title = {Changed epitopes drive the antigenic drift for influenza {A} {(H3N2)}
viruses},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S31},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S31},
doi = {10.1186/1471-2105-12-S1-S31},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HuangY11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JeongNUM11,
author = {Euna Jeong and
Masao Nagasaki and
Kazuko Ueno and
Satoru Miyano},
title = {Ontology-based instance data validation for high-quality curated biological
pathways},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S8},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S8},
doi = {10.1186/1471-2105-12-S1-S8},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JeongNUM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JohnTSL11,
author = {Shalini John and
Sundarapandian Thangapandian and
Sugunadevi Sakkiah and
Keun Woo Lee},
title = {Potent bace-1 inhibitor design using pharmacophore modeling, in silico
screening and molecular docking studies},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S28},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S28},
doi = {10.1186/1471-2105-12-S1-S28},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JohnTSL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KangCTCTPW11,
author = {Chu Kang and
Yung{-}Jen Chuang and
Kai Che Tung and
Chun Chao and
Chuan Yi Tang and
Shih Chi Peng and
David Shan{-}Hill Wong},
title = {A genetic algorithm-based boolean delay model of intracellular signal
transduction in inflammation},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S17},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S17},
doi = {10.1186/1471-2105-12-S1-S17},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KangCTCTPW11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KatoN11,
author = {Tsuyoshi Kato and
Nozomi Nagano},
title = {Discriminative structural approaches for enzyme active-site prediction},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S49},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S49},
doi = {10.1186/1471-2105-12-S1-S49},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KatoN11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KyogokuFOO11,
author = {Riku Kyogoku and
Ryo Fujimoto and
Tomonobu Ozaki and
Takenao Ohkawa},
title = {A method for supporting retrieval of articles on protein structure
analysis considering users' intention},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S42},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S42},
doi = {10.1186/1471-2105-12-S1-S42},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KyogokuFOO11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LeeW11,
author = {Nung Kion Lee and
Dianhui Wang},
title = {{SOMEA:} self-organizing map based extraction algorithm for {DNA}
motif identification with heterogeneous model},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S16},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S16},
doi = {10.1186/1471-2105-12-S1-S16},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LeeW11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiCLTHJCCL11,
author = {Sung{-}Chou Li and
Wen{-}Ching Chan and
Chun{-}Hung Lai and
Kuo{-}Wang Tsai and
Chun{-}Nan Hsu and
Yuh{-}Shan Jou and
Hua{-}Chien Chen and
Chun{-}Hong Chen and
Wen{-}Chang Lin},
title = {{UMARS:} Un-MAppable Reads Solution},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S9},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S9},
doi = {10.1186/1471-2105-12-S1-S9},
timestamp = {Mon, 23 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LiCLTHJCCL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuLUZGSZDY11,
author = {Sanmin Liu and
Lantao Liu and
Ugur Uzuner and
Xin Zhou and
Manxi Gu and
Weibing Shi and
Yixiang Zhang and
Susie Y. Dai and
Joshua S. Yuan},
title = {HDX-Analyzer: a novel package for statistical analysis of protein
structure dynamics},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S43},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S43},
doi = {10.1186/1471-2105-12-S1-S43},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuLUZGSZDY11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LoBBB11,
author = {Christine Lo and
Ali Bashir and
Vikas Bansal and
Vineet Bafna},
title = {Strobe sequence design for haplotype assembly},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S24},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S24},
doi = {10.1186/1471-2105-12-S1-S24},
timestamp = {Fri, 09 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LoBBB11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MitraRRUGMWH11,
author = {Suparna Mitra and
Paul Rupek and
Daniel C. Richter and
Tim Urich and
Jack A. Gilbert and
Folker Meyer and
Andreas Wilke and
Daniel H. Huson},
title = {Functional analysis of metagenomes and metatranscriptomes using {SEED}
and {KEGG}},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S21},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S21},
doi = {10.1186/1471-2105-12-S1-S21},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/MitraRRUGMWH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MonjiKOO11,
author = {Hiroyuki Monji and
Satoshi Koizumi and
Tomonobu Ozaki and
Takenao Ohkawa},
title = {Interaction site prediction by structural similarity to neighboring
clusters in protein-protein interaction networks},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S39},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S39},
doi = {10.1186/1471-2105-12-S1-S39},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MonjiKOO11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MuradSY11,
author = {William Murad and
Rahul Singh and
Ten{-}Yang Yen},
title = {An efficient algorithmic approach for mass spectrometry-based disulfide
connectivity determination using multi-ion analysis},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S12},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S12},
doi = {10.1186/1471-2105-12-S1-S12},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MuradSY11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ParidaPJ11,
author = {Laxmi Parida and
Pier Palamara and
Asif Javed},
title = {A minimal descriptor of an ancestral recombinations graph},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S6},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S6},
doi = {10.1186/1471-2105-12-S1-S6},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ParidaPJ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ParkB11,
author = {Yongjin Park and
Joel S. Bader},
title = {Resolving the structure of interactomes with hierarchical agglomerative
clustering},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S44},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S44},
doi = {10.1186/1471-2105-12-S1-S44},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ParkB11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ParkK11,
author = {Keunwan Park and
Dongsup Kim},
title = {Modeling allosteric signal propagation using protein structure networks},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S23},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S23},
doi = {10.1186/1471-2105-12-S1-S23},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ParkK11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ParkKLYK11,
author = {Yu Rang Park and
Jihun Kim and
Hye Won Lee and
Young Jo Yoon and
Ju Han Kim},
title = {GOChase-II: correcting semantic inconsistencies from Gene Ontology-based
annotations for gene products},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S40},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S40},
doi = {10.1186/1471-2105-12-S1-S40},
timestamp = {Thu, 28 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ParkKLYK11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ParkN11,
author = {Sung{-}Joon Park and
Kenta Nakai},
title = {A regression analysis of gene expression in {ES} cells reveals two
gene classes that are significantly different in epigenetic patterns},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S50},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S50},
doi = {10.1186/1471-2105-12-S1-S50},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ParkN11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/QianY11,
author = {Xiaoning Qian and
Byung{-}Jun Yoon},
title = {Comparative analysis of protein interaction networks reveals that
conserved pathways are susceptible to {HIV-1} interception},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S19},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S19},
doi = {10.1186/1471-2105-12-S1-S19},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/QianY11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RhoKJLBSSLKYKLK11,
author = {Kyoohyoung Rho and
Bumjin Kim and
Youngjun Jang and
Sanghyun Lee and
Taejeong Bae and
Jihae Seo and
Chae Hwa Seo and
Ji{-}Hyun Lee and
Hyunjung Kang and
Ungsik Yu and
Sunghoon Kim and
Sanghyuk Lee and
Wan Kyu Kim},
title = {{GARNET} - gene set analysis with exploration of annotation relations},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S25},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S25},
doi = {10.1186/1471-2105-12-S1-S25},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/RhoKJLBSSLKYKLK11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SahraeianY11,
author = {Sayed Mohammad Ebrahim Sahraeian and
Byung{-}Jun Yoon},
title = {PicXAA-R: Efficient structural alignment of multiple {RNA} sequences
using a greedy approach},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S38},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S38},
doi = {10.1186/1471-2105-12-S1-S38},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SahraeianY11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SaitoSS11,
author = {Yutaka Saito and
Kengo Sato and
Yasubumi Sakakibara},
title = {Fast and accurate clustering of noncoding RNAs using ensembles of
sequence alignments and secondary structures},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S48},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S48},
doi = {10.1186/1471-2105-12-S1-S48},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SaitoSS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SarkarKS11,
author = {Anita Sarkar and
Sonu Kumar and
Durai Sundar},
title = {The {G} protein-coupled receptors in the pufferfish Takifugu rubripes},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S3},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S3},
doi = {10.1186/1471-2105-12-S1-S3},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SarkarKS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ShaoWWYLZB11,
author = {Mingfu Shao and
Sheng Wang and
Chao Wang and
Xiongying Yuan and
Shuai Li and
Wei{-}Mou Zheng and
Dongbo Bu},
title = {Incorporating Ab Initio energy into threading approaches for protein
structure prediction},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S54},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S54},
doi = {10.1186/1471-2105-12-S1-S54},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ShaoWWYLZB11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SongHRM11,
author = {Giltae Song and
Chih{-}Hao Hsu and
Cathy Riemer and
Webb Miller},
title = {Evaluation of methods for detecting conversion events in gene clusters},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S45},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S45},
doi = {10.1186/1471-2105-12-S1-S45},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SongHRM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SongPCSKK11,
author = {Young Soo Song and
Chan Hee Park and
Hee{-}Joon Chung and
Hyunjung Shin and
Jihun Kim and
Ju Han Kim},
title = {Semantically enabled and statistically supported biological hypothesis
testing with tissue microarray databases},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S51},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S51},
doi = {10.1186/1471-2105-12-S1-S51},
timestamp = {Thu, 28 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SongPCSKK11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SuBBAM11,
author = {Gang Su and
Charles F. Burant and
Christopher W. Beecher and
Brian D. Athey and
Fan Meng},
title = {Integrated metabolome and transcriptome analysis of the {NCI60} dataset},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S36},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S36},
doi = {10.1186/1471-2105-12-S1-S36},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SuBBAM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TendulkarW11,
author = {Ashish V. Tendulkar and
Pramod P. Wangikar},
title = {Characterization and sequence prediction of structural variations
in {\(\alpha\)}-helix},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S20},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S20},
doi = {10.1186/1471-2105-12-S1-S20},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TendulkarW11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Totrov11,
author = {Maxim Totrov},
title = {Ligand binding site superposition and comparison based on Atomic Property
Fields: identification of distant homologues, convergent evolution
and PDB-wide clustering of binding sites},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S35},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S35},
doi = {10.1186/1471-2105-12-S1-S35},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Totrov11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WengCHL11,
author = {Yi{-}Zhong Weng and
Darby Tien{-}Hao Chang and
Yu{-}Feng Huang and
Chih{-}Wei Lin},
title = {A study on the flexibility of enzyme active sites},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S32},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S32},
doi = {10.1186/1471-2105-12-S1-S32},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WengCHL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/XiaDLT11,
author = {Fei Xia and
Yong Dou and
Guo{-}Qing Lei and
Yusong Tan},
title = {{FPGA} accelerator for protein secondary structure prediction based
on the {GOR} algorithm},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S5},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S5},
doi = {10.1186/1471-2105-12-S1-S5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/XiaDLT11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangAD11,
author = {Xiao Yang and
Srinivas Aluru and
Karin S. Dorman},
title = {Repeat-aware modeling and correction of short read errors},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S52},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S52},
doi = {10.1186/1471-2105-12-S1-S52},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YangAD11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangHYZ11,
author = {Pengyi Yang and
Joshua Wing Kei Ho and
Jean Yee Hwa Yang and
Bing Bing Zhou},
title = {Gene-gene interaction filtering with ensemble of filters},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S10},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S10},
doi = {10.1186/1471-2105-12-S1-S10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YangHYZ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangWHYXY11,
author = {Can Yang and
Xiang Wan and
Zengyou He and
Qiang Yang and
Hong Xue and
Weichuan Yu},
title = {The choice of null distributions for detecting gene-gene interactions
in genome-wide association studies},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S26},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S26},
doi = {10.1186/1471-2105-12-S1-S26},
timestamp = {Mon, 23 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YangWHYXY11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Yoon11,
author = {Byung{-}Jun Yoon},
title = {Enhanced stochastic optimization algorithm for finding effective multi-target
therapeutics},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S18},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S18},
doi = {10.1186/1471-2105-12-S1-S18},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Yoon11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YoonYLKNPPL11,
author = {Joo Yoon and
Jeonghun Yeom and
Heebum Lee and
Kyutae Kim and
Seungjin Na and
Kunsoo Park and
Eunok Paek and
Cheolju Lee},
title = {High-throughput peptide quantification using mTRAQ reagent triplex},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S46},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S46},
doi = {10.1186/1471-2105-12-S1-S46},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YoonYLKNPPL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangSJ11,
author = {Wangshu Zhang and
Fengzhu Sun and
Rui Jiang},
title = {Integrating multiple protein-protein interaction networks to prioritize
disease genes: a Bayesian regression approach},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S11},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S11},
doi = {10.1186/1471-2105-12-S1-S11},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangSJ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhaoCBWSSMEM11,
author = {Hui Zhao and
Lore Cloots and
Tim Van den Bulcke and
Yan Wu and
Riet De Smet and
Valerie Storms and
Pieter Meysman and
Kristof Engelen and
Kathleen Marchal},
title = {Query-based biclustering of gene expression data using Probabilistic
Relational Models},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S37},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S37},
doi = {10.1186/1471-2105-12-S1-S37},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhaoCBWSSMEM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhengS11,
author = {Chunfang Zheng and
David Sankoff},
title = {On the {PATHGROUPS} approach to rapid small phylogeny},
journal = {{BMC} Bioinform.},
volume = {12},
number = {{S-1}},
pages = {S4},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-S1-S4},
doi = {10.1186/1471-2105-12-S1-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhengS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AgarwalVBS10,
author = {Sumeet Agarwal and
Candida Vaz and
Alok Bhattacharya and
Ashwin Srinivasan},
title = {Prediction of novel precursor miRNAs using a context-sensitive hidden
Markov model {(CSHMM)}},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {29},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S29},
doi = {10.1186/1471-2105-11-S1-S29},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/AgarwalVBS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Al-NasrSH10,
author = {Kamal Al{-}Nasr and
Weitao Sun and
Jing He},
title = {Structure prediction for the helical skeletons detected from the low
resolution protein density map},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {44},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S44},
doi = {10.1186/1471-2105-11-S1-S44},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Al-NasrSH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Bader10,
author = {Martin Bader},
title = {Genome rearrangements with duplications},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {27},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S27},
doi = {10.1186/1471-2105-11-S1-S27},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Bader10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BansalBE10,
author = {Mukul S. Bansal and
J. Gordon Burleigh and
Oliver Eulenstein},
title = {Efficient genome-scale phylogenetic analysis under the duplication-loss
and deep coalescence cost models},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {42},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S42},
doi = {10.1186/1471-2105-11-S1-S42},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BansalBE10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BhardwajGL10,
author = {Nitin Bhardwaj and
Mark Gerstein and
Hui Lu},
title = {Genome-wide sequence-based prediction of peripheral proteins using
a novel semi-supervised learning technique},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {6},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S6},
doi = {10.1186/1471-2105-11-S1-S6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BhardwajGL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BoucherK10,
author = {Christina Boucher and
James King},
title = {Fast motif recognition via application of statistical thresholds},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {11},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S11},
doi = {10.1186/1471-2105-11-S1-S11},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BoucherK10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BrownG10,
author = {Daniel G. Brown and
Daniil Golod},
title = {Decoding HMMs using the \emph{k }best paths: algorithms and applications},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {28},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S28},
doi = {10.1186/1471-2105-11-S1-S28},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BrownG10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BrownT10,
author = {Daniel G. Brown and
Jakub Truszkowski},
title = {New decoding algorithms for Hidden Markov Models using distance measures
on labellings},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {40},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S40},
doi = {10.1186/1471-2105-11-S1-S40},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BrownT10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChanLSYLH10,
author = {Wen{-}Ching Chan and
Po{-}Huang Liang and
Yan{-}Ping Shih and
Ueng{-}Cheng Yang and
Wen{-}Chang Lin and
Chun{-}Nan Hsu},
title = {Learning to predict expression efficacy of vectors in recombinant
protein production},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {21},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S21},
doi = {10.1186/1471-2105-11-S1-S21},
timestamp = {Mon, 23 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChanLSYLH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChandraGNPP10,
author = {Vinod S. S. Chandra and
Reshmi Girijadevi and
Achuthsankar S. Nair and
Sreenadhan S. Pillai and
Radhakrishna M. Pillai},
title = {MTar: a computational microRNA target prediction architecture for
human transcriptome},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {2},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S2},
doi = {10.1186/1471-2105-11-S1-S2},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChandraGNPP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChangSL10,
author = {Darby Tien{-}Hao Chang and
Yu{-}Tang Syu and
Po{-}Chang Lin},
title = {Predicting the protein-protein interactions using primary structures
with predicted protein surface},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {3},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S3},
doi = {10.1186/1471-2105-11-S1-S3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChangSL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenLL10,
author = {Yixuan Chen and
Xin Li and
Jing Li},
title = {A novel approach for haplotype-based association analysis using family
data},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {45},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S45},
doi = {10.1186/1471-2105-11-S1-S45},
timestamp = {Fri, 19 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenLL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChinCHKL10,
author = {Chia{-}Hao Chin and
Shu{-}Hwa Chen and
Chin{-}Wen Ho and
Ming{-}Tat Ko and
Chung{-}Yen Lin},
title = {A hub-attachment based method to detect functional modules from confidence-scored
protein interactions and expression profiles},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {25},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S25},
doi = {10.1186/1471-2105-11-S1-S25},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChinCHKL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChungP10,
author = {Won{-}Hyoung Chung and
Seong{-}Bae Park},
title = {Hit integration for identifying optimal spaced seeds},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {37},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S37},
doi = {10.1186/1471-2105-11-S1-S37},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChungP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CirielloGG10,
author = {Giovanni Ciriello and
Claudio Gallina and
Concettina Guerra},
title = {Analysis of interactions between ribosomal proteins and {RNA} structural
motifs},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {41},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S41},
doi = {10.1186/1471-2105-11-S1-S41},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CirielloGG10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CominV10,
author = {Matteo Comin and
Davide Verzotto},
title = {Classification of protein sequences by means of irredundant patterns},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {16},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S16},
doi = {10.1186/1471-2105-11-S1-S16},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/CominV10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DongASL10,
author = {Xianjun Dong and
Altuna Akalin and
Yogita Sharma and
Boris Lenhard},
title = {Translog, a web browser for studying the expression divergence of
homologous genes},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {59},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S59},
doi = {10.1186/1471-2105-11-S1-S59},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DongASL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GargTR10a,
author = {Aarti Garg and
Rupinder Tewari and
Gajendra P. S. Raghava},
title = {Virtual Screening of potential drug-like inhibitors against Lysine/DAP
pathway of \emph{Mycobacterium tuberculosis}},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {53},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S53},
doi = {10.1186/1471-2105-11-S1-S53},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GargTR10a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GeorgeT10,
author = {Tina P. George and
Tessamma Thomas},
title = {Discrete wavelet transform de-noising in eukaryotic gene splicing},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {50},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S50},
doi = {10.1186/1471-2105-11-S1-S50},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GeorgeT10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GuptaWBPPD10,
author = {Ravi Gupta and
Priyankara Wikramasinghe and
Anirban Bhattacharyya and
Francisco A. Perez and
Sharmistha Pal and
Ramana V. Davuluri},
title = {Annotation of gene promoters by integrative data-mining of ChIP-seq
Pol-II enrichment data},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {65},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S65},
doi = {10.1186/1471-2105-11-S1-S65},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/GuptaWBPPD10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Han10,
author = {Henry Han},
title = {Nonnegative principal component analysis for mass spectral serum profiles
and biomarker discovery},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {1},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S1},
doi = {10.1186/1471-2105-11-S1-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Han10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HsiehCHWO10,
author = {Chih{-}Hung Hsieh and
Darby Tien{-}Hao Chang and
Cheng{-}Hao Hsueh and
Chi{-}Yeh Wu and
Yen{-}Jen Oyang},
title = {Predicting microRNA precursors with a generalized Gaussian components
based density estimation algorithm},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {52},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S52},
doi = {10.1186/1471-2105-11-S1-S52},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HsiehCHWO10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuJE10,
author = {Pingzhao Hu and
Hui Jiang and
Andrew Emili},
title = {Predicting protein functions by relaxation labelling protein interaction
network},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {64},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S64},
doi = {10.1186/1471-2105-11-S1-S64},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HuJE10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuZ10,
author = {Jianjun Hu and
Fan Zhang},
title = {BayesMotif: de novo protein sorting motif discovery from impure datasets},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {66},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S66},
doi = {10.1186/1471-2105-11-S1-S66},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HuZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuangL10,
author = {Yezhou Huang and
Shao Li},
title = {Detection of characteristic sub pathway network for angiogenesis based
on the comprehensive pathway network},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {32},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S32},
doi = {10.1186/1471-2105-11-S1-S32},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HuangL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JoshiYLJPGSFMMXS10,
author = {Trupti Joshi and
Zhe Yan and
Marc Libault and
Dong{-}Hoon Jeong and
Sunhee Park and
Pamela J. Green and
D. Janine Sherrier and
Andrew Farmer and
Greg May and
Blake C. Meyers and
Dong Xu and
Gary Stacey},
title = {Prediction of novel miRNAs and associated target genes in \emph{Glycine
max}},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {14},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S14},
doi = {10.1186/1471-2105-11-S1-S14},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/JoshiYLJPGSFMMXS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JungMYK10,
author = {Inkyung Jung and
Akihisa Matsuyama and
Minoru Yoshida and
Dongsup Kim},
title = {PostMod: sequence based prediction of kinase-specific phosphorylation
sites with indirect relationship},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {10},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S10},
doi = {10.1186/1471-2105-11-S1-S10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JungMYK10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KabirNI10,
author = {Mitra Kabir and
Nasimul Noman and
Hitoshi Iba},
title = {Reverse engineering gene regulatory network from microarray data using
linear time-variant model},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {56},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S56},
doi = {10.1186/1471-2105-11-S1-S56},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KabirNI10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KrishnanLV10,
author = {S. P. T. Krishnan and
Sim Sze Liang and
Bharadwaj Veeravalli},
title = {Towards high performance computing for molecular structure prediction
using {IBM} Cell Broadband Engine - an implementation perspective},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {36},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S36},
doi = {10.1186/1471-2105-11-S1-S36},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KrishnanLV10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KulkarniKMPSV10,
author = {Vishwesh V. Kulkarni and
Venkatesh Kareenhalli and
Pushkar Malakar and
Lucy Y. Pao and
Michael G. Safonov and
Ganesh A. Viswanathan},
title = {Stability analysis of the {GAL} regulatory network in \emph{Saccharomyces
cerevisiae} and \emph{Kluyveromyces lactis}},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {43},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S43},
doi = {10.1186/1471-2105-11-S1-S43},
timestamp = {Wed, 29 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KulkarniKMPSV10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LataMR10,
author = {Sneh Lata and
Nitish K. Mishra and
Gajendra P. S. Raghava},
title = {AntiBP2: improved version of antibacterial peptide prediction},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {19},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S19},
doi = {10.1186/1471-2105-11-S1-S19},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LataMR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiCYA10,
author = {Limin Li and
Wai{-}Ki Ching and
Takako Yamaguchi and
Kiyoko F. Aoki{-}Kinoshita},
title = {A weighted \emph{q}-gram method for glycan structure classification},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {33},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S33},
doi = {10.1186/1471-2105-11-S1-S33},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiCYA10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiP10,
author = {Yongjin Li and
Jagdish Chandra Patra},
title = {Integration of multiple data sources to prioritize candidate genes
using discounted rating system},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {20},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S20},
doi = {10.1186/1471-2105-11-S1-S20},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LinRSM10,
author = {Yu Lin and
Vaibhav Rajan and
Krister M. Swenson and
Bernard M. E. Moret},
title = {Estimating true evolutionary distances under rearrangements, duplications,
and losses},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {54},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S54},
doi = {10.1186/1471-2105-11-S1-S54},
timestamp = {Tue, 31 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LinRSM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuSXM10,
author = {Xiaowen Liu and
Baozhen Shan and
Lei Xin and
Bin Ma},
title = {Better score function for peptide identification with {ETD} {MS/MS}
spectra},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {4},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S4},
doi = {10.1186/1471-2105-11-S1-S4},
timestamp = {Wed, 15 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuSXM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LuZF10,
author = {Zaixin Lu and
Zhiyu Zhao and
Bin Fu},
title = {Efficient protein alignment algorithm for protein search},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {34},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S34},
doi = {10.1186/1471-2105-11-S1-S34},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LuZF10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ManoTBP10,
author = {Adi Mano and
Tamir Tuller and
Oded B{\'{e}}j{\`{a}} and
Ron Y. Pinter},
title = {Comparative classification of species and the study of pathway evolution
based on the alignment of metabolic pathways},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {38},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S38},
doi = {10.1186/1471-2105-11-S1-S38},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ManoTBP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MatthewsW10,
author = {Suzanne J. Matthews and
Tiffani L. Williams},
title = {MrsRF: an efficient MapReduce algorithm for analyzing large collections
of evolutionary trees},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {15},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S15},
doi = {10.1186/1471-2105-11-S1-S15},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MatthewsW10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MehanNDWZ10,
author = {Michael R. Mehan and
Juan Nunez{-}Iglesias and
Chao Dai and
Michael S. Waterman and
Xianghong Jasmine Zhou},
title = {An integrative modular approach to systematically predict gene-phenotype
associations},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {62},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S62},
doi = {10.1186/1471-2105-11-S1-S62},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MehanNDWZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MeiF10,
author = {Suyu Mei and
Wang Fei},
title = {Amino acid classification based spectrum kernel fusion for protein
subnuclear localization},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {17},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S17},
doi = {10.1186/1471-2105-11-S1-S17},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MeiF10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MerkleMW10,
author = {Daniel Merkle and
Martin Middendorf and
Nicolas Wieseke},
title = {A parameter-adaptive dynamic programming approach for inferring cophylogenies},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {60},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S60},
doi = {10.1186/1471-2105-11-S1-S60},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MerkleMW10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MishraR10,
author = {Nitish K. Mishra and
Gajendra P. S. Raghava},
title = {Prediction of {FAD} interacting residues in a protein from its primary
sequence using evolutionary information},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {48},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S48},
doi = {10.1186/1471-2105-11-S1-S48},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MishraR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MitraBMZ10,
author = {Ramkrishna Mitra and
Sanghamitra Bandyopadhyay and
Ujjwal Maulik and
Michael Q. Zhang},
title = {SFSSClass: an integrated approach for miRNA based tumor classification},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {22},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S22},
doi = {10.1186/1471-2105-11-S1-S22},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MitraBMZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MitraSH10,
author = {Suparna Mitra and
Max Schubach and
Daniel H. Huson},
title = {Short clones or long clones? {A} simulation study on the use of paired
reads in metagenomics},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {12},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S12},
doi = {10.1186/1471-2105-11-S1-S12},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/MitraSH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MohamedCG10,
author = {Thahir P. Mohamed and
Jaime G. Carbonell and
Madhavi Ganapathiraju},
title = {Active learning for human protein-protein interaction prediction},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {57},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S57},
doi = {10.1186/1471-2105-11-S1-S57},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MohamedCG10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/OsmanbeyogluWCG10,
author = {Hatice U. Osmanbeyoglu and
Jessica A. Wehner and
Jaime G. Carbonell and
Madhavi Ganapathiraju},
title = {Active machine learning for transmembrane helix prediction},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {58},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S58},
doi = {10.1186/1471-2105-11-S1-S58},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/OsmanbeyogluWCG10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PandeyKG10,
author = {Jayesh Pandey and
Mehmet Koyut{\"{u}}rk and
Ananth Grama},
title = {Functional characterization and topological modularity of molecular
interaction networks},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {35},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S35},
doi = {10.1186/1471-2105-11-S1-S35},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PandeyKG10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PanditS10,
author = {Aridaman Pandit and
Somdatta Sinha},
title = {Using genomic signatures for {HIV-1} sub-typing},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {26},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S26},
doi = {10.1186/1471-2105-11-S1-S26},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PanditS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Paragi-VedanthiD10,
author = {Padmapriya Paragi{-}Vedanthi and
Mukesh Doble},
title = {Comparison of PGH\({}_{\mbox{2 }}\)binding site in prostaglandin synthases},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {51},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S51},
doi = {10.1186/1471-2105-11-S1-S51},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Paragi-VedanthiD10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ParidaM10,
author = {Laxmi Parida and
Gene Myers},
title = {{APBC} 2010. The Eighth Asia Pacific Bioinformatics Conference Bangalore,
India, 18-21 January 2010},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {0},
year = {2010},
url = {http://www.biomedcentral.com/1471-2105/11/S1/I1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ParidaM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ParkH10,
author = {Byungkyu Park and
Kyungsook Han},
title = {An ontology-based search engine for protein-protein interactions},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {23},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S23},
doi = {10.1186/1471-2105-11-S1-S23},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ParkH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RajanXLSM10,
author = {Vaibhav Rajan and
Andrew Wei Xu and
Yu Lin and
Krister M. Swenson and
Bernard M. E. Moret},
title = {Heuristics for the inversion median problem},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {30},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S30},
doi = {10.1186/1471-2105-11-S1-S30},
timestamp = {Tue, 31 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/RajanXLSM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RiveraVB10,
author = {Corban G. Rivera and
Rachit Vakil and
Joel S. Bader},
title = {NeMo: Network Module identification in Cytoscape},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {61},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S61},
doi = {10.1186/1471-2105-11-S1-S61},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RiveraVB10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SaigoHKT10,
author = {Hiroto Saigo and
Masahiro Hattori and
Hisashi Kashima and
Koji Tsuda},
title = {Reaction graph kernels predict {EC} numbers of unknown enzymatic reactions
in plant secondary metabolism},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {31},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S31},
doi = {10.1186/1471-2105-11-S1-S31},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SaigoHKT10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SeokKDX10,
author = {Junhee Seok and
Amit Kaushal and
Ronald W. Davis and
Wenzhong Xiao},
title = {Knowledge-based analysis of microarrays for the discovery of transcriptional
regulation relationships},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {8},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S8},
doi = {10.1186/1471-2105-11-S1-S8},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SeokKDX10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SomanSS10,
author = {Soja Saghar Soman and
Krishnankutty Chandrika Sivakumar and
Easwaran Sreekumar},
title = {Molecular dynamics simulation studies and \emph{in vitro }site directed
mutagenesis of avian beta-defensin Apl{\_}AvBD2},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {7},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S7},
doi = {10.1186/1471-2105-11-S1-S7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SomanSS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SorathiyaBL10,
author = {Anil Sorathiya and
Andrea Bracciali and
Pietro Li{\`{o}}},
title = {Formal reasoning on qualitative models of coinfection of {HIV} and
Tuberculosis and {HAART} therapy},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {67},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S67},
doi = {10.1186/1471-2105-11-S1-S67},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SorathiyaBL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SundaramurthySSGS10,
author = {Pandurangan Sundaramurthy and
Khader Shameer and
Raashi Sreenivasan and
Sunita Gakkhar and
Ramanathan Sowdhamini},
title = {{HORI:} a web server to compute Higher Order Residue Interactions
in protein structures},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {24},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S24},
doi = {10.1186/1471-2105-11-S1-S24},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SundaramurthySSGS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/UllahS10,
author = {Abu Zafer M. Dayem Ullah and
Kathleen Steinh{\"{o}}fel},
title = {A hybrid approach to protein folding problem integrating constraint
programming with local search},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {39},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S39},
doi = {10.1186/1471-2105-11-S1-S39},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/UllahS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/VijayabaskarV10,
author = {M. S. Vijayabaskar and
Saraswathi Vishveshwara},
title = {Comparative analysis of thermophilic and mesophilic proteins using
Protein Energy Networks},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {49},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S49},
doi = {10.1186/1471-2105-11-S1-S49},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/VijayabaskarV10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangPC10,
author = {Jianyi Yang and
Zhen{-}Ling Peng and
Xin Chen},
title = {Prediction of protein structural classes for low-homology sequences
based on predicted secondary structure},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {9},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S9},
doi = {10.1186/1471-2105-11-S1-S9},
timestamp = {Mon, 25 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YangPC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangWYXY10,
author = {Can Yang and
Xiang Wan and
Qiang Yang and
Hong Xue and
Weichuan Yu},
title = {Identifying main effects and epistatic interactions from large-scale
{SNP} data via adaptive group Lasso},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {18},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S18},
doi = {10.1186/1471-2105-11-S1-S18},
timestamp = {Mon, 23 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YangWYXY10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangZMMJ10,
author = {Yang Yang and
Jiayuan Zhao and
Robyn L. Morgan and
Wenbo Ma and
Tao Jiang},
title = {Computational prediction of type {III} secreted proteins from gram-negative
bacteria},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {47},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S47},
doi = {10.1186/1471-2105-11-S1-S47},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/YangZMMJ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangZZZ10,
author = {Pengyi Yang and
Bing Bing Zhou and
Zili Zhang and
Albert Y. Zomaya},
title = {A multi-filter enhanced genetic ensemble system for gene selection
and sample classification of microarray data},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {5},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S5},
doi = {10.1186/1471-2105-11-S1-S5},
timestamp = {Thu, 20 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/YangZZZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YeturuUKC10,
author = {Kalidas Yeturu and
Tapani Utriainen and
Graham J. L. Kemp and
Nagasuma R. Chandra},
title = {An automated framework for understanding structural variations in
the binding grooves of {MHC} class {II} molecules},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {55},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S55},
doi = {10.1186/1471-2105-11-S1-S55},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YeturuUKC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangBKR10,
author = {Lei Zhang and
James Bailey and
Arun Siddharth Konagurthu and
Kotagiri Ramamohanarao},
title = {A fast indexing approach for protein structure comparison},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {46},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S46},
doi = {10.1186/1471-2105-11-S1-S46},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangBKR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangL10,
author = {Melvin Zhang and
Hon Wai Leong},
title = {Bidirectional best hit \emph{r}-window gene clusters},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {63},
year = {2010},
url = {https://doi.org/10.1186/1471-2105-11-S1-S63},
doi = {10.1186/1471-2105-11-S1-S63},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GanguliMBRMD10a,
title = {In silico screening of herbal and nanoparticle lead compounds for
effectivity against H5N1, {H1N1} neuraminidase and telomerase},
journal = {{BMC} Bioinform.},
volume = {11},
number = {{S-1}},
pages = {13},
year = {2010},
note = {Withdrawn.},
url = {https://doi.org/10.1186/1471-2105-11-S1-S13},
doi = {10.1186/1471-2105-11-S1-S13},
timestamp = {Tue, 08 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/GanguliMBRMD10a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AutioKSKHA09,
author = {Reija Autio and
Sami Kilpinen and
Matti Saarela and
Olli{-}P. Kallioniemi and
Sampsa Hautaniemi and
Jaakko Astola},
title = {Comparison of Affymetrix data normalization methods using 6, 926 experiments
across five array generations},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S24},
doi = {10.1186/1471-2105-10-S1-S24},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/AutioKSKHA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AutioSJHA09,
author = {Reija Autio and
Matti Saarela and
Anna{-}Kaarina J{\"{a}}rvinen and
Sampsa Hautaniemi and
Jaakko Astola},
title = {Advanced analysis and visualization of gene copy number and expression
data},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S70},
doi = {10.1186/1471-2105-10-S1-S70},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AutioSJHA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Bader09,
author = {Martin Bader},
title = {Sorting by reversals, block interchanges, tandem duplications, and
deletions},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S9},
doi = {10.1186/1471-2105-10-S1-S9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Bader09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BesenbacherPM09,
author = {S{\o}ren Besenbacher and
Christian N. S. Pedersen and
Thomas Mailund},
title = {A fast algorithm for genome-wide haplotype pattern mining},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S74},
doi = {10.1186/1471-2105-10-S1-S74},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BesenbacherPM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Bi09,
author = {Chengpeng Bi},
title = {{DNA} motif alignment by evolving a population of Markov chains},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S13},
doi = {10.1186/1471-2105-10-S1-S13},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Bi09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BockerBK09,
author = {Sebastian B{\"{o}}cker and
Sebastian Briesemeister and
Gunnar W. Klau},
title = {On optimal comparability editing with applications to molecular diagnostics},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S61},
doi = {10.1186/1471-2105-10-S1-S61},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BockerBK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChanCLMSRD09,
author = {Chi Yu Chan and
C. Steven Carmack and
Dang D. Long and
Anil Maliyekkel and
Yu Shao and
Igor B. Roninson and
Ye Ding},
title = {A structural interpretation of the effect of GC-content on efficiency
of {RNA} interference},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S33},
doi = {10.1186/1471-2105-10-S1-S33},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChanCLMSRD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenX09,
author = {Jing Chen and
Guangcheng Xi},
title = {An unsupervised partition method based on association delineated revised
mutual information},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S63},
doi = {10.1186/1471-2105-10-S1-S63},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenX09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChinLLY09,
author = {Francis Y. L. Chin and
Henry C. M. Leung and
Wei{-}Lin Li and
Siu{-}Ming Yiu},
title = {Finding optimal threshold for correction error reads in {DNA} assembling},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S15},
doi = {10.1186/1471-2105-10-S1-S15},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChinLLY09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DaiDXFDWH09,
author = {Zhiming Dai and
Xianhua Dai and
Qian Xiang and
Jihua Feng and
Yangyang Deng and
Jiang Wang and
Caisheng He},
title = {Transcriptional interaction-assisted identification of dynamic nucleosome
positioning},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S31},
doi = {10.1186/1471-2105-10-S1-S31},
timestamp = {Tue, 19 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DaiDXFDWH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DharanN09,
author = {Smitha Dharan and
Achuthsankar S. Nair},
title = {Biclustering of gene expression data using reactive greedy randomized
adaptive search procedure},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S27},
doi = {10.1186/1471-2105-10-S1-S27},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DharanN09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FreudenbergWYL09,
author = {Jan Freudenberg and
Mingyi Wang and
Yaning Yang and
Wentian Li},
title = {Partial correlation analysis indicates causal relationships between
GC-content, exon density and recombination rate in the human genome},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S66},
doi = {10.1186/1471-2105-10-S1-S66},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FreudenbergWYL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FuJLWYCLXWLWSGQH09,
author = {Yan Fu and
Wei Jia and
Zhuang Lu and
Haipeng Wang and
Zuofei Yuan and
Hao Chi and
You Li and
Liyun Xiu and
Wenping Wang and
Chao Liu and
Leheng Wang and
Ruixiang Sun and
Wen Gao and
Xiaohong Qian and
Si{-}Min He},
title = {Efficient discovery of abundant post-translational modifications and
spectral pairs using peptide mass and retention time differences},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S50},
doi = {10.1186/1471-2105-10-S1-S50},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FuJLWYCLXWLWSGQH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GambinW09,
author = {Tomasz Gambin and
Krzysztof Walczak},
title = {A new classification method using array Comparative Genome Hybridization
data, based on the concept of Limited Jumping Emerging Patterns},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S64},
doi = {10.1186/1471-2105-10-S1-S64},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GambinW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HanZF09,
author = {Pengfei Han and
Xiuzhen Zhang and
Zhi{-}Ping Feng},
title = {Predicting disordered regions in proteins using the profiles of amino
acid indices},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S42},
doi = {10.1186/1471-2105-10-S1-S42},
timestamp = {Mon, 20 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HanZF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HaoZPTGWZL09,
author = {Pei Hao and
Siyuan Zheng and
Jie Ping and
Kang Tu and
Christian Gieger and
Rui Wang{-}Sattler and
Yang Zhong and
Yixue Li},
title = {Human gene expression sensitivity according to large scale meta-analysis},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S56},
doi = {10.1186/1471-2105-10-S1-S56},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HaoZPTGWZL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HassanHBMHR09,
author = {Md. Rafiul Hassan and
M. Maruf Hossain and
James Bailey and
Geoff MacIntyre and
Joshua Wing Kei Ho and
Kotagiri Ramamohanarao},
title = {A voting approach to identify a small number of highly predictive
genes using multiple classifiers},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S19},
doi = {10.1186/1471-2105-10-S1-S19},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HassanHBMHR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HossainAS09,
author = {Mohammad Sajjad Hossain and
Navid Azimi and
Steven Skiena},
title = {Crystallizing short-read assemblies around seeds},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S16},
doi = {10.1186/1471-2105-10-S1-S16},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HossainAS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuangKY09,
author = {Jhang{-}Wei Huang and
Chwan{-}Chuen King and
Jinn{-}Moon Yang},
title = {Co-evolution positions and rules for antigenic variants of human influenza
{A/H3N2} viruses},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S41},
doi = {10.1186/1471-2105-10-S1-S41},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HuangKY09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuangLR09,
author = {Fenix W. D. Huang and
Linda Y. M. Li and
Christian M. Reidys},
title = {Sequence-structure relations of pseudoknot {RNA}},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S39},
doi = {10.1186/1471-2105-10-S1-S39},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HuangLR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuangWLZ09,
author = {Wenhui Huang and
Pengyuan Wang and
Zhen Liu and
Liqing Zhang},
title = {Identifying disease associations via genome-wide association studies},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S68},
doi = {10.1186/1471-2105-10-S1-S68},
timestamp = {Tue, 21 Feb 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HuangWLZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HusonRMAS09,
author = {Daniel H. Huson and
Daniel C. Richter and
Suparna Mitra and
Alexander F. Auch and
Stephan C. Schuster},
title = {Methods for comparative metagenomics},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S12},
doi = {10.1186/1471-2105-10-S1-S12},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HusonRMAS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JacksonSA09,
author = {Benjamin G. Jackson and
Patrick S. Schnable and
Srinivas Aluru},
title = {Parallel short sequence assembly of transcriptomes},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S14},
doi = {10.1186/1471-2105-10-S1-S14},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JacksonSA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JiaHBZC09,
author = {Yi Jia and
Jun Huan and
Vincent Buhr and
Jintao Zhang and
Leonidas N. Carayannopoulos},
title = {Towards comprehensive structural motif mining for better fold annotation
in the "twilight zone" of sequence dissimilarity},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S46},
doi = {10.1186/1471-2105-10-S1-S46},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JiaHBZC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JiangTWF09,
author = {Rui Jiang and
Wanwan Tang and
Xuebing Wu and
Wenhui Fu},
title = {A random forest approach to the detection of epistatic interactions
in case-control studies},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S65},
doi = {10.1186/1471-2105-10-S1-S65},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JiangTWF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JoungF09,
author = {Je{-}Gun Joung and
Zhangjun Fei},
title = {Computational identification of condition-specific miRNA targets based
on gene expression profiles and sequence information},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S34},
doi = {10.1186/1471-2105-10-S1-S34},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JoungF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KadriHB09,
author = {Sabah Kadri and
Veronica F. Hinman and
Panayiotis V. Benos},
title = {HHMMiR: efficient \emph{de novo }prediction of microRNAs using hierarchical
hidden Markov models},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S35},
doi = {10.1186/1471-2105-10-S1-S35},
timestamp = {Wed, 22 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KadriHB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KimHH09,
author = {Jisu Kim and
De{-}Shuang Huang and
Kyungsook Han},
title = {Finding motif pairs in the interactions between heterogeneous proteins
via bootstrapping and boosting},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S57},
doi = {10.1186/1471-2105-10-S1-S57},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KimHH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Klau09,
author = {Gunnar W. Klau},
title = {A new graph-based method for pairwise global network alignment},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S59},
doi = {10.1186/1471-2105-10-S1-S59},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Klau09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KolarikKH09,
author = {Corinna Kol{\'{a}}rik and
Roman Klinger and
Martin Hofmann{-}Apitius},
title = {Identification of histone modifications in biomedical text for supporting
epigenomic research},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S28},
doi = {10.1186/1471-2105-10-S1-S28},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KolarikKH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LaiES09,
author = {Yinglei Lai and
Sarah E. Eckenrode and
Jin{-}Xiong She},
title = {A statistical framework for integrating two microarray data sets in
differential expression analysis},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S23},
doi = {10.1186/1471-2105-10-S1-S23},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LaiES09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LeeAH09,
author = {Chih Lee and
Ali Abdool and
Chun{-}Hsi Huang},
title = {PCA-based population structure inference with generic clustering algorithms},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S73},
doi = {10.1186/1471-2105-10-S1-S73},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LeeAH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiLG09,
author = {Wentian Li and
Annette Lee and
Peter K. Gregersen},
title = {Copy-number-variation and copy-number-alteration region detection
by cumulative plots},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S67},
doi = {10.1186/1471-2105-10-S1-S67},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiLG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LinBE09,
author = {Harris T. Lin and
J. Gordon Burleigh and
Oliver Eulenstein},
title = {Triplet supertree heuristics for the tree of life},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S8},
doi = {10.1186/1471-2105-10-S1-S8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LinBE09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LinCLCX09,
author = {Guan Ning Lin and
Zhipeng Cai and
Guohui Lin and
Sounak Chakraborty and
Dong Xu},
title = {ComPhy: prokaryotic composite distance phylogenies inferred from whole-genome
gene sets},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S5},
doi = {10.1186/1471-2105-10-S1-S5},
timestamp = {Wed, 30 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LinCLCX09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuHKHZ09,
author = {Chun{-}Chi Liu and
Jianjun Hu and
Mrinal Kalakrishnan and
Haiyan Huang and
Xianghong Jasmine Zhou},
title = {Integrative disease classification based on cross-platform microarray
data},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S25},
doi = {10.1186/1471-2105-10-S1-S25},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuHKHZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LongZO09,
author = {Quan Long and
Qingrun Zhang and
Jurg Ott},
title = {Detecting disease-associated genotype patterns},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S75},
doi = {10.1186/1471-2105-10-S1-S75},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LongZO09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MeulemanEGWR09,
author = {Wouter Meuleman and
Judith Y. M. N. Engwegen and
Marie{-}Christine W. Gast and
Lodewyk F. A. Wessels and
Marcel J. T. Reinders},
title = {Analysis of mass spectrometry data using sub-spectra},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S51},
doi = {10.1186/1471-2105-10-S1-S51},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MeulemanEGWR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PapamichailP09,
author = {Dimitrios P. Papamichail and
Georgios P. Papamichail},
title = {Improved algorithms for approximate string matching (extended abstract)},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S10},
doi = {10.1186/1471-2105-10-S1-S10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PapamichailP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ParidaJMCBC09,
author = {Laxmi Parida and
Asif Javed and
Marta Mel{\'{e}} and
Francesc Calafell and
Jaume Bertranpetit},
title = {Minimizing recombinations in consensus networks for phylogeographic
studies},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S72},
doi = {10.1186/1471-2105-10-S1-S72},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ParidaJMCBC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ParkerW09,
author = {Brian J. Parker and
Jiayu Wen},
title = {Predicting microRNA targets in time-series microarray experiments
via functional data analysis},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S32},
doi = {10.1186/1471-2105-10-S1-S32},
timestamp = {Fri, 17 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ParkerW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PhakthanakanokRKSWP09,
author = {Krongsakda Phakthanakanok and
Khanok Ratanakhanokchai and
Khin Lay Kyu and
Pornthep Sompornpisut and
Aaron Watts and
Surapong Pinitglang},
title = {A computational analysis of {SARS} cysteine proteinase-octapeptide
substrate interaction: implication for structure and active site binding
mechanism},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S48},
doi = {10.1186/1471-2105-10-S1-S48},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PhakthanakanokRKSWP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PoolsapKA09,
author = {Unyanee Poolsap and
Yuki Kato and
Tatsuya Akutsu},
title = {Prediction of {RNA} secondary structure with pseudoknots using integer
programming},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S38},
doi = {10.1186/1471-2105-10-S1-S38},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/PoolsapKA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SongYYZDLCJ09,
author = {Dandan Song and
Yang Yang and
Bin Yu and
Binglian Zheng and
Zhidong Deng and
Bao{-}Liang Lu and
Xuemei Chen and
Tao Jiang},
title = {Computational prediction of novel non-coding RNAs in \emph{Arabidopsis
thaliana}},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S36},
doi = {10.1186/1471-2105-10-S1-S36},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SongYYZDLCJ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SunBSFDLVMM09,
author = {Hong Sun and
Tijl De Bie and
Valerie Storms and
Qiang Fu and
Thomas Dhollander and
Karen Lemmens and
Annemieke Verstuyf and
Bart De Moor and
Kathleen Marchal},
title = {ModuleDigger: an itemset mining framework for the detection of \emph{cis}-regulatory
modules},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S30},
doi = {10.1186/1471-2105-10-S1-S30},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SunBSFDLVMM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SunH09,
author = {Weitao Sun and
Jing He},
title = {Reduction of the secondary structure topological space through direct
estimation of the contact energy formed by the secondary structures},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S40},
doi = {10.1186/1471-2105-10-S1-S40},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SunH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SuzukiSKS09,
author = {Taiji Suzuki and
Masashi Sugiyama and
Takafumi Kanamori and
Jun Sese},
title = {Mutual information estimation reveals global associations between
stimuli and biological processes},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S52},
doi = {10.1186/1471-2105-10-S1-S52},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SuzukiSKS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SwensonM09,
author = {Krister M. Swenson and
Bernard M. E. Moret},
title = {Inversion-based genomic signatures},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S7},
doi = {10.1186/1471-2105-10-S1-S7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SwensonM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SwensonTTM09,
author = {Krister M. Swenson and
Yokuki To and
Jijun Tang and
Bernard M. E. Moret},
title = {Maximum independent sets of commuting and noninterfering inversions},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S6},
doi = {10.1186/1471-2105-10-S1-S6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SwensonTTM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TaiVKL09,
author = {Chin{-}Hsien Tai and
James J. Vincent and
Changhoon Kim and
Byungkook Lee},
title = {{SE:} an algorithm for deriving sequence alignment from a pair of
superimposed structures},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S4},
doi = {10.1186/1471-2105-10-S1-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TaiVKL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TeberLBFW09,
author = {Erdahl T. Teber and
Jason Y. Liu and
Sara Ballouz and
Diane Fatkin and
Merridee A. Wouters},
title = {Comparison of automated candidate gene prediction systems using genes
implicated in type 2 diabetes by genome-wide association studies},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S69},
doi = {10.1186/1471-2105-10-S1-S69},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TeberLBFW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TianWGF09,
author = {Jian Tian and
Ningfeng Wu and
Jun Guo and
Yunliu Fan},
title = {Prediction of amyloid fibril-forming segments based on a support vector
machine},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S45},
doi = {10.1186/1471-2105-10-S1-S45},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TianWGF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TungL09,
author = {Thai Quang Tung and
Doheon Lee},
title = {A method to improve protein subcellular localization prediction by
integrating various biological data sources},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S43},
doi = {10.1186/1471-2105-10-S1-S43},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TungL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/VlietWR09,
author = {Martin H. van Vliet and
Lodewyk F. A. Wessels and
Marcel J. T. Reinders},
title = {Knowledge driven decomposition of tumor expression profiles},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S20},
doi = {10.1186/1471-2105-10-S1-S20},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/VlietWR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangGW09,
author = {Jun Wang and
Maozu Guo and
Chun{-}yu Wang},
title = {{CGTS:} a site-clustering graph based tagSNP selection algorithm in
genotype data},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S71},
doi = {10.1186/1471-2105-10-S1-S71},
timestamp = {Wed, 11 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WangGW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangHZ09,
author = {Hongning Wang and
Minlie Huang and
Xiaoyan Zhu},
title = {Extract interaction detection methods from the biological literature},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S55},
doi = {10.1186/1471-2105-10-S1-S55},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/WangHZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangWLZQD09,
author = {Quan Wang and
Lin Wan and
Dayong Li and
Lihuang Zhu and
Minping Qian and
Minghua Deng},
title = {Searching for bidirectional promoters in \emph{Arabidopsis thaliana}},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S29},
doi = {10.1186/1471-2105-10-S1-S29},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WangWLZQD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangZL09,
author = {Wendi Wang and
Peiheng Zhang and
Xinchun Liu},
title = {Short read {DNA} fragment anchoring algorithm},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S17},
doi = {10.1186/1471-2105-10-S1-S17},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WangZL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WarrenS09a,
author = {Robert Warren and
David Sankoff},
title = {Genome aliquoting with double cut and join},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S2},
doi = {10.1186/1471-2105-10-S1-S2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WarrenS09a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WonPLKL09,
author = {Hong{-}Hee Won and
Inho Park and
Eunjung Lee and
Jong{-}Won Kim and
Doheon Lee},
title = {Comparative analysis of the {JAK/STAT} signaling through erythropoietin
receptor and thrombopoietin receptor using a systems approach},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S53},
doi = {10.1186/1471-2105-10-S1-S53},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WonPLKL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/XiCCWW09,
author = {Yanping Xi and
Yi{-}Ping Phoebe Chen and
Ming Cao and
Weirong Wang and
Fei Wang},
title = {Analysis on relationship between extreme pathways and correlated reaction
sets},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S58},
doi = {10.1186/1471-2105-10-S1-S58},
timestamp = {Mon, 06 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/XiCCWW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/XiaDZYXZ09,
author = {Fei Xia and
Yong Dou and
Xingming Zhou and
Xuejun Yang and
Jiaqing Xu and
Yang Zhang},
title = {Fine-grained parallel RNAalifold algorithm for {RNA} secondary structure
prediction on {FPGA}},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S37},
doi = {10.1186/1471-2105-10-S1-S37},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/XiaDZYXZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/XuHXYY09,
author = {Qian Xu and
Derek Hao Hu and
Hong Xue and
Weichuan Yu and
Qiang Yang},
title = {Semi-supervised protein subcellular localization},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S47},
doi = {10.1186/1471-2105-10-S1-S47},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/XuHXYY09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/XuSY09,
author = {Zixiang Xu and
Xiao Sun and
Shihai Yu},
title = {Genome-scale analysis to the impact of gene deletion on the metabolism
of \emph{E. coli}: constraint-based simulation approach},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S62},
doi = {10.1186/1471-2105-10-S1-S62},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/XuSY09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangWMLC09,
author = {Fan Yang and
Hua{-}zhen Wang and
Hong Mi and
Cheng{-}de Lin and
Wei{-}wen Cai},
title = {Using random forest for reliable classification and cost-sensitive
learning for medical diagnosis},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S22},
doi = {10.1186/1471-2105-10-S1-S22},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YangWMLC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Yu09,
author = {G. X. Yu},
title = {Pathogenic \emph{Bacillus anthracis }in the progressive gene losses
and gains in adaptive evolution},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S3},
doi = {10.1186/1471-2105-10-S1-S3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Yu09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YueST09,
author = {Feng Yue and
Jian Shi and
Jijun Tang},
title = {Simultaneous phylogeny reconstruction and multiple sequence alignment},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S11},
doi = {10.1186/1471-2105-10-S1-S11},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YueST09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangFS09,
author = {Wensheng Zhang and
Hong{-}Bin Fang and
Jiuzhou Song},
title = {Principal component tests: applied to temporal gene expression data},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S26},
doi = {10.1186/1471-2105-10-S1-S26},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangFS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangO09,
author = {Kelvin Xi Zhang and
B. F. Francis Ouellette},
title = {{GAIA:} a gram-based interaction analysis tool - an approach for identifying
interacting domains in yeast},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S60},
doi = {10.1186/1471-2105-10-S1-S60},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangO09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangWZ09,
author = {Michael Q. Zhang and
Michael S. Waterman and
Xuegong Zhang},
title = {The Seventh Asia Pacific Bioinformatics Conference {(APBC2009)}},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S1},
doi = {10.1186/1471-2105-10-S1-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangWZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhaoWDC09,
author = {Liling Zhao and
Jihua Wang and
Xianghua Dou and
Zanxia Cao},
title = {Studying the unfolding process of protein {G} and protein {L} under
physical property space},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S44},
doi = {10.1186/1471-2105-10-S1-S44},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhaoWDC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhengHZQQZD09,
author = {Hao Zheng and
Xingyi Hang and
Ji Zhu and
Minping Qian and
Wubin Qu and
Chenggang Zhang and
Minghua Deng},
title = {{REMAS:} a new regression model to identify alternative splicing events
from exon array data},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S18},
doi = {10.1186/1471-2105-10-S1-S18},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhengHZQQZD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Zhu09,
author = {Dongxiao Zhu},
title = {Semi-supervised gene shaving method for predicting low variation biological
pathways from genome-wide data},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S54},
doi = {10.1186/1471-2105-10-S1-S54},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Zhu09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhuSP09,
author = {Yanni Zhu and
Xiaotong Shen and
Wei Pan},
title = {Network-based support vector machine for classification of microarray
samples},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S21},
doi = {10.1186/1471-2105-10-S1-S21},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhuSP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZouWDP09,
author = {An{-}Min Zou and
Fang{-}Xiang Wu and
Jiarui Ding and
Guy G. Poirier},
title = {Quality assessment of tandem mass spectra using support vector machine
{(SVM)}},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-1}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S1-S49},
doi = {10.1186/1471-2105-10-S1-S49},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ZouWDP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/AbouelhodaGBS08,
author = {Mohamed Ibrahim Abouelhoda and
Robert Giegerich and
Behshad Behzadi and
Jean{-}Marc Steyaert},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Alignment of Minisatellite Maps: {A} Minimum Spanning Tree-based Approach},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {261--272},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc080a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/AbouelhodaGBS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/AliotoGPP08,
author = {Tyler S. Alioto and
Roderic Guig{\'{o}} and
Ernesto Picardi and
Graziano Pesole},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {GenePC and {ASPIC} Integrate Gene Predictions with Expressed Sequence
Alignments To Predict Alternative Transcripts},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {363--372},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc038a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/AliotoGPP08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/AssfalgGKPWZ08,
author = {Johannes A{\ss}falg and
Jing Gong and
Hans{-}Peter Kriegel and
Alexey Pryakhin and
Tiandi Wei and
Arthur Zimek},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Supervised Ensembles of Prediction Methods for Subcellular Localization},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {29--38},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc044a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/AssfalgGKPWZ08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/BockerBBT08,
author = {Sebastian B{\"{o}}cker and
Sebastian Briesemeister and
Quang Bao Anh Bui and
Anke Tru{\ss}},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {A Fixed-Parameter Approach for Weighted Cluster Editing},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {211--220},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc050a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/BockerBBT08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Boden08,
author = {Mikael Bod{\'{e}}n},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Predicting Nucleolar Proteins Using Support-Vector Machines},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {19--28},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc066a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/Boden08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/BrazmaMA08,
author = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Preface},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc08preface.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/BrazmaMA08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChenFSYZZ08,
author = {Zhixiang Chen and
Bin Fu and
Robert T. Schweller and
Boting Yang and
Zhiyu Zhao and
Binhai Zhu},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Linear Time Probabilistic Algorithms for the Singular Haplotype Reconstruction
Problem from {SNP} Fragments},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {333--342},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc028a.pdf},
timestamp = {Wed, 04 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/ChenFSYZZ08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChinLSY08,
author = {Francis Y. L. Chin and
Henry C. M. Leung and
Man{-}Hung Siu and
Siu{-}Ming Yiu},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Optimal Algorithm for Finding {DNA} Motifs with Nucleotide Adjacent
Dependency},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {343--352},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc064a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ChinLSY08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/DasGuptaJM08,
author = {Bhaskar DasGupta and
Jin Jun and
Ion I. Mandoiu},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Primer Selection Methods for Detection of Genomic Inversions and Deletions
via {PAMP}},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {353--362},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc086a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/DasGuptaJM08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/DavisNKHR08,
author = {Melissa J. Davis and
Andrew F. Newman and
Imran Khan and
Jane Hunter and
Mark A. Ragan},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Integrating Hierarchical Controlled Vocabularies With {OWL} Ontology:
{A} Case Study from the Domain of Molecular Interactions},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {145--154},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc024a.pdf},
timestamp = {Tue, 27 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/DavisNKHR08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Dress08,
author = {Andreas W. M. Dress},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Recent Progress in Phylogenetic Combinatorics},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {1--4},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/keynote001.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/Dress08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/HaudryOEBLKWWGGABBFWH08,
author = {Yannick Haudry and
Chuang Kee Ong and
Laurence Ettwiller and
Hugo B{\'{e}}rub{\'{e}} and
Ivica Letunic and
Misha Kapushesky and
Paul{-}Daniel Weeber and
Xi Wang and
Julien Gagneur and
Charles Girardot and
Detlev Arendt and
Peer Bork and
Alvis Brazma and
Eileen E. M. Furlong and
Joachim Wittbrodt and
Thorsten Henrich},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Comparing and Analysing Gene Expression Patterns Across Animal Species
Using 4DXpress},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {373--382},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc035a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/HaudryOEBLKWWGGABBFWH08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/HayashidaA08,
author = {Morihiro Hayashida and
Tatsuya Akutsu},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Image Compression-based Approach to Measuring the Similarity of Protein
Structures},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {221--230},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc055a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/HayashidaA08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Kanehisa08,
author = {Minoru Kanehisa},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {{KEGG} for Medical and Pharmaceutical Applications},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {5},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/keynote002.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/Kanehisa08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/KhodabakhshiMRG08,
author = {Alireza Hadj Khodabakhshi and
J{\'{a}}n Manuch and
Arash Rafiey and
Arvind Gupta},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Structure-Approximating Design of Stable Proteins in 2D {HP} Model
Fortified by Cysteine Monomers},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {49--58},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc110a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/KhodabakhshiMRG08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/KimOOT08,
author = {Jin{-}Dong Kim and
Tomoko Ohta and
Kanae Oda and
Jun'ichi Tsujii},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {From Text to Pathway: Corpus Annotation for Knowledge Acquisition
from Biomedical Literature},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {165--176},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc104a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/KimOOT08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/KonovalovH08,
author = {Dmitry A. Konovalov and
Dik Heg},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Estimation of Population Allele Frequencies from Small Samples Containing
Multiple Generations},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {321--332},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc013a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/KonovalovH08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/KucukuralSE08,
author = {Alper K{\"{u}}{\c{c}}{\"{u}}kural and
Osman Ugur Sezerman and
Ayt{\"{u}}l Er{\c{c}}il},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Discrimination of Native Folds Using Network Properties of Protein
Structures},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {59--68},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc034a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/KucukuralSE08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/LangmeadJ08,
author = {Christopher James Langmead and
Sumit Kumar Jha},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Symbolic Approaches for Finding Control Strategies in Boolean Networks},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {307--320},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc051a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/LangmeadJ08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/LiELM08,
author = {Juntao Li and
Majid Eshaghi and
Jianhua Liu and
Karuturi R. Krishna Murthy},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Near-sigmoid Modeling to Simultaneously Profile Genome-wide {DNA}
Replication Timing and Efficiency in Single {DNA} Replication Microarray
Studies},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {383--392},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc077a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/LiELM08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/LiL08,
author = {Yuan{-}Peng Li and
Bao{-}Liang Lu},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Semantic Similarity Definition over Gene Ontology by Further Mining
of the Information Content},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {155--164},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc084a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/LiL08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/LiRGR08,
author = {Yunlei Li and
Dick de Ridder and
Marco J. L. de Groot and
Marcel J. T. Reinders},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Metabolic Pathway Alignment (M-Pal) Reveals Diversity and Alternatives
in Conserved Networks},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {273--286},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc040a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/LiRGR08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/LukmanSLC08,
author = {Suryani Lukman and
Kelvin Sim and
Jinyan Li and
Yi{-}Ping Phoebe Chen},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Interacting Amino Acid Preferences of 3D Pattern Pairs at the Binding
Sites of Transient and Obligate Protein Complexes},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {69--78},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc026a.pdf},
timestamp = {Wed, 07 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/LukmanSLC08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/MaY08,
author = {Bin Ma and
Hongyi Yao},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Seed Optimization Is No Easier than Optimal Golomb Ruler Design},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {133--144},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc019a.pdf},
timestamp = {Mon, 13 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/MaY08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/NakatoG08,
author = {Ryuichiro Nakato and
Osamu Gotoh},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {A Novel Method for Reducing Computational Complexity of Whole Genome
Sequence Alignment},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {101--110},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc059a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/NakatoG08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/RangwalaK08,
author = {Huzefa Rangwala and
George Karypis},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {fRMSDAlign: Protein Sequence Alignment Using Predicted Local Structure
Information for Pairs with Low Sequence Identity},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {111--122},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc011a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/RangwalaK08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/SanderDZLS08,
author = {Oliver Sander and
Francisco S. Domingues and
Hongbo Zhu and
Thomas Lengauer and
Ingolf Sommer},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Structural Descriptors of Protein-Protein Binding Sites},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {79--88},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc012a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/SanderDZLS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/SmalterHL08,
author = {Aaron M. Smalter and
Jun Huan and
Gerald H. Lushington},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Chemical Compound Classification with Automatically Mined Structure
Patterns},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {39--48},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc107a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/SmalterHL08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/SwensonATM08,
author = {Krister M. Swenson and
William Arndt and
Jijun Tang and
Bernard M. E. Moret},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Phylogenetic Reconstruction from Complete Gene Orders of Whole Genomes},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {241--250},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc093a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/SwensonATM08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/TadepalliRWMH08,
author = {Satish Tadepalli and
Naren Ramakrishnan and
Layne T. Watson and
Bhubaneswar Mishra and
Richard F. Helm},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Simultaneously Segmenting Multiple Gene Expression Time Courses by
Analyzing Cluster Dynamics},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {297--306},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc031a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/TadepalliRWMH08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ThanN08,
author = {Cuong Than and
Luay Nakhleh},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {SPR-based Tree Reconciliation: Non-binary Trees and Multiple Solutions},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {251--260},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc097a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ThanN08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/TsengWGBR08,
author = {Huei{-}Hun Elizabeth Tseng and
Zasha Weinberg and
Jeremy Gore and
Ronald R. Breaker and
Walter L. Ruzzo},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Finding Non-coding RNAs Through Genome-Scale Clustering},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {199--210},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc018a.pdf},
timestamp = {Tue, 26 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/TsengWGBR08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Valencia08,
author = {Alfonso Valencia},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Protein Interactions Extracted from Genomes and Papers},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {7},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/keynote003.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/Valencia08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/WarrenS08,
author = {Robert Warren and
David Sankoff},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Genome Halving with Double Cut and Join},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {231--240},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc057a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/WarrenS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/WenPW08,
author = {Jiayu Wen and
Brian J. Parker and
Georg F. Weiller},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Analysis of Structural Strand Asymmetry in Non-coding RNAs},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {187--198},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc091a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/WenPW08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/WongCLY08,
author = {Thomas K. F. Wong and
Y. S. Chiu and
Tak Wah Lam and
Siu{-}Ming Yiu},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {A Memory Efficient Algorithm for Structural Alignment of RNAs with
Embedded Simple Pseudoknots},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {89--100},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc105a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/WongCLY08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/YangL08,
author = {Wen{-}Yun Yang and
Bao{-}Liang Lu},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {String Kernels with Feature Selection for {SVM} Protein Classification},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {9--18},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc068a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/YangL08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/YangLY08,
author = {Yang Yang and
Bao{-}Liang Lu and
Wen{-}Yun Yang},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Classification of Protein Sequences Based on Word Segmentation Methods},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {177--186},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc065a.pdf},
timestamp = {Tue, 17 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/YangLY08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/YangZ08,
author = {Jialiang Yang and
Louxin Zhang},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Run Probability of High-Order Seed Patterns and its Applications to
Finding Good Transition Seeds},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {123--132},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc056a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/YangZ08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ZhaoWCA08,
author = {Xing{-}Ming Zhao and
Rui{-}Sheng Wang and
Luonan Chen and
Kazuyuki Aihara},
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Automatic Modeling of Signal Pathways from Protein-Protein Interaction
Networks},
booktitle = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
pages = {287--296},
publisher = {Imperial College Press},
year = {2008},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2008/apbc101a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ZhaoWCA08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/apbc/2008,
editor = {Alvis Brazma and
Satoru Miyano and
Tatsuya Akutsu},
title = {Proceedings of the 6th Asia-Pacific Bioinformatics Conference, {APBC}
2008, 14-17 January 2008, Kyoto, Japan},
series = {Advances in Bioinformatics and Computational Biology},
volume = {6},
publisher = {Imperial College Press},
year = {2008},
isbn = {978-1-84816-108-5},
timestamp = {Mon, 15 Sep 2008 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/2008.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/AkutsuF07,
author = {Tatsuya Akutsu and
Daiji Fukagawa},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Inferring a Chemical Structure from a Feature Vector Based on Frequency
of Labeled Paths and Small Fragments},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {165--174},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc118a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/AkutsuF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/BelcaidBCCGPV07,
author = {Mahdi Belcaid and
Anne Bergeron and
Annie Chateau and
C{\'{e}}dric Chauve and
Yannick Gingras and
Guylaine Poisson and
M. Vendette},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Exploring Genome Rearrangements using Virtual Hybridization},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {205--214},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc217a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/BelcaidBCCGPV07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/CaiGSSXL07,
author = {Zhipeng Cai and
Randy Goebel and
Mohammad R. Salavatipour and
Yi Shi and
Lizhe Xu and
Guohui Lin},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Selecting Genes with Dissimilar Discrimination Strength for Sample
Class Prediction},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {81--90},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc133a.pdf},
timestamp = {Thu, 12 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/CaiGSSXL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChengC07,
author = {Betty Yee Man Cheng and
Jaime G. Carbonell},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Combining N-grams and Alignment in G-protein Coupling Specificity
Prediction},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {363--372},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc212a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ChengC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChoiHLPLD07,
author = {V. Choi and
Y. Huang and
Vy Lam and
D. Potter and
Reinhard C. Laubenbacher and
Karen Duca},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Using Formal Concept Analysis for Microarray Data Comparison},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {57--66},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc163a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ChoiHLPLD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/CominP07,
author = {Matteo Comin and
Laxmi Parida},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Subtle Motif Discovery for Detection of {DNA} Regulatory Sites},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {27--36},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc122a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/CominP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/DingHZ07,
author = {Shilin Ding and
Minlie Huang and
Xiaoyan Zhu},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Semi-supervised Pattern Learning for Extracting Relations from Bioscience
Texts},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {307--316},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc198a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/DingHZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/EastonIHM07,
author = {B. C. Easton and
A. V. Isaev and
Gavin A. Huttley and
Peter Maxwell},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {A Probabilistic Method to Identify Compensatory Substitutions for
Pathogenic Mutations},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {195--204},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc141a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/EastonIHM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/FuBBCY07,
author = {Qi Fu and
Elizabeth Bent and
James Borneman and
Marek Chrobak and
Neal E. Young},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Algorithmic Approaches to Selecting Control Clones in {DNA} Array
Hybridization Experiments},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {17--26},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc124a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/FuBBCY07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/FuJ07,
author = {Zheng Fu and
Tao Jiang},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Computing the Breakpoint Distance between Partially Ordered Genomes},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {237--246},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc184a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/FuJ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Graves07,
author = {Jennifer A. Marshall Graves},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Exploring Genomes of Distantly Related Mammals},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {1},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbckey1a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/Graves07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/HayashidaAN07,
author = {Morihiro Hayashida and
Tatsuya Akutsu and
Hiroshi Nagamochi},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {A Novel Clustering Method for Analysis of Biological Networks using
Maximal Components of Graphs},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {257--266},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc119a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/HayashidaAN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/HuangJK07,
author = {Gaofeng Huang and
Peter Jeavons and
Dominic Kwiatkowski},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Exact and Heuristic Approaches for Identifying Disease-Associated
{SNP} Motifs},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {175--184},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc172a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/HuangJK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/HuffnerWZ07,
author = {Falk H{\"{u}}ffner and
Sebastian Wernicke and
Thomas Zichner},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Algorithm Engineering for Color-Coding to Facilitate Signaling Pathway
Detection},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {277--286},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc160a.pdf},
timestamp = {Sun, 20 Nov 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/HuffnerWZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/HusonAJS07,
author = {Daniel H. Huson and
Alexander F. Auch and
Qi Ji and
Stephan C. Schuster},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {etagenome Analysis using Megan},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {7--16},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc108a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/HusonAJS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/JiangXZ07,
author = {Minghui Jiang and
Ying Xu and
Binhai Zhu},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Protein Structure-Structure Alignment with Discrete Fr'echet Distance},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {131--141},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc162a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/JiangXZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/LuHS07,
author = {Yonggang Lu and
Jing He and
Charlie E. M. Strauss},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Deriving Protein Structure Topology from the Helix Skeletion in Low
Resolution Density Map using Rosetta},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {143--151},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc193a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/LuHS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/MadeiraO07,
author = {Sara C. Madeira and
Arlindo L. Oliveira},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {An Efficient Biclustering Algorithm for Finding Genes with Similar
Patterns in Time-series Expression Data},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {67--80},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc221a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/MadeiraO07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/MakB07,
author = {Denise Y. F. Mak and
Gary Benson},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {All Hits All The Time: Parameter Free Calculation of Seed Sensitivity},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {327--340},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc136a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/MakB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ManuchG07,
author = {J{\'{a}}n Manuch and
Daya Ram Gaur},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Fitting Protein Chains to Cubic Lattice is NP-Complete},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {153--164},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc226a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ManuchG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Nadeau07,
author = {Joseph H. Nadeau},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Bugs, Guts and Fat - {A} Systems Approach to the Metabolic 'Axis of
Evil'},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {3},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbckey2a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/Nadeau07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/NingCL07,
author = {Kang Ning and
Ket Fah Chong and
Hon Wai Leong},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {De Novo Peptide Sequencing for Mass Spectra Based on Multi-Charge
Strong Tags},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {287--296},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc105a.pdf},
timestamp = {Fri, 03 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/NingCL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/OkadaAA07,
author = {Kinya Okada and
Kiyoshi Asai and
Masanori Arita},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Flow Model of the Protein-protein Interaction Network for Finding
Credible Interactions},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {317--326},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc210a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/OkadaAA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ParkGR07,
author = {Sung{-}Hee Park and
David R. Gilbert and
Keun Ho Ryu},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Fast Structural Similarity Search Based on Topology String Matching},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {341--351},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc153a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ParkGR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Pevzner07,
author = {Pavel A. Pevzner},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Protein Identification via Spectral Networks Analysis},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {5},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbckey3a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/Pevzner07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/RaghupathyHD07,
author = {Narayanan Raghupathy and
Rose Hoberman and
Dannie Durand},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Two Plus Two Does not Equal Three: Statistical Tests for Multiple
Genome Comparison},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {215--225},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc223a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/RaghupathyHD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/SankoffWC07,
author = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Preface},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/preface-version8.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/SankoffWC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ShanMZL07,
author = {Baozhen Shan and
Bin Ma and
Kaizhong Zhang and
Gilles A. Lajoie},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Complexities and Algorithms for Glycan Structure Sequencing using
Tandem Mass Spectrometry},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {297--306},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc164a.pdf},
timestamp = {Mon, 13 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ShanMZL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/StissingMPBF07,
author = {Martin Stig Stissing and
Thomas Mailund and
Christian N. S. Pedersen and
Gerth St{\o}lting Brodal and
Rolf Fagerberg},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Computing the All-Pairs Quartet Distance on a Set of Evolutionary
Trees},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {91--100},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc145a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/StissingMPBF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/StissingPMBF07,
author = {Martin Stig Stissing and
Christian N. S. Pedersen and
Thomas Mailund and
Gerth St{\o}lting Brodal and
Rolf Fagerberg},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Computing the Quartet Distance Between Evolutionary Trees of Bounded
Degree},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {101--110},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc146a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/StissingPMBF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/SuhL07,
author = {Young Ju Suh and
Wentian Li},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Genotype-Based Case-Control Analysis, Violation of Hardy-Weinberg
Equilibrium, and Phase Diagrams},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {185--194},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc181a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/SuhL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/SulW07,
author = {Seung{-}Jin Sul and
Tiffani L. Williams},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {A Randomized Algorithm for Comparing Sets of Phylogenetic Trees},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {121--130},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc224a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/SulW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/SupperFSDZ07,
author = {Jochen Supper and
Holger Fr{\"{o}}hlich and
Christian Spieth and
Andreas Dr{\"{a}}ger and
Andreas Zell},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Inferring Gene Regulatory Networks by Machine Learning Methods},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {247--256},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc113a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/SupperFSDZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/SupperFZ07,
author = {Jochen Supper and
Holger Fr{\"{o}}hlich and
Andreas Zell},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Gene Regulatory Network Inference via Regression Based Topological
Refinement},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {267--276},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc127a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/SupperFZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/WangZTCWZB07,
author = {Pinghao Wang and
Bing Bing Zhou and
Monther Tarawneh and
Daniel Chu and
Chen Wang and
Albert Y. Zomaya and
Richard P. Brent},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {A Global Maximum Likelihood Super-Quartet Phylogeny Method},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {111--120},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc233a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/WangZTCWZB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/WernickeR07,
author = {Sebastian Wernicke and
Florian Rasche},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Simple and Fast Alignment of Metabolic Pathways by Exploiting Local
Diversity},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {353--362},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc150a.pdf},
timestamp = {Sun, 20 Nov 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/WernickeR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/XieWLY07,
author = {Xudong Xie and
Shuanhu Wu and
Kin{-}Man Lam and
Hong Yan},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {An Effective Promoter Detection Method using the Adaboost Algorithm},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {37--46},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc112a.pdf},
timestamp = {Wed, 16 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/XieWLY07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Xu07,
author = {Wei Xu},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {The Distance Between Randomly Constructed Genomes},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {227--236},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc138a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/Xu07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ZhaoLY07,
author = {Hongya Zhao and
Alan Wee{-}Chung Liew and
Hong Yan},
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {A New Strategy of Geometrical Biclustering for Microarray Data Analysis},
booktitle = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
pages = {47--56},
publisher = {Imperial College Press},
year = {2007},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2007/apbc121a.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ZhaoLY07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/apbc/2007,
editor = {David Sankoff and
Lusheng Wang and
Francis Y. L. Chin},
title = {Proceedings of 5th Asia-Pacific Bioinformatics Conference, {APBC}
2007, 15-17 January 2007, Hong Kong, China},
series = {Advances in Bioinformatics and Computational Biology},
volume = {5},
publisher = {Imperial College Press},
year = {2007},
isbn = {978-1-86094-783-4},
timestamp = {Sun, 21 Oct 2012 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/2007.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/AkutsuHCN06,
author = {Tatsuya Akutsu and
Morihiro Hayashida and
Wai{-}Ki Ching and
Michael K. Ng},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {On the Complexity of Finding Control Strategies for Boolean Networks},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {99--108},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/155.pdf},
timestamp = {Wed, 03 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/AkutsuHCN06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Arauzo-BravoFKS06,
author = {Marcos J. Ara{\'{u}}zo{-}Bravo and
Satoshi Fujii and
Hidetoshi Kono and
Akinori Sarai},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Disentangling the Role of Tetranucleotide in the Sequence-Dependence
of {DNA} Conformation: {A} Molecular Dynamics Approach},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {227--236},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/213.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/Arauzo-BravoFKS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ArunL06,
author = {K. Arun and
Christopher James Langmead},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Structure-Based Chemical Shift Prediction Using Random Forests Non-Linear
Regression},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {317--326},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/238.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ArunL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/AssfalgKKKPR06,
author = {Johannes A{\ss}falg and
Hans{-}Peter Kriegel and
Peer Kr{\"{o}}ger and
Peter Kunath and
Alexey Pryakhin and
Matthias Renz},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Semi-Supervised Threshold Queries on Pharmacogenomics Time Sequences},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {307--316},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/237.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/AssfalgKKKPR06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/CaiHL06,
author = {Zhipeng Cai and
Maysam Heydari and
Guohui Lin},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Microarray Missing Value Imputation by Iterated Local Least Squares},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {159--168},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/188.pdf},
timestamp = {Wed, 30 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/CaiHL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChanLY06,
author = {P. Y. Chan and
Tak Wah Lam and
Siu{-}Ming Yiu},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {A More Accurate and Efficient Whole Genome Phylogeny},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {337--352},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/248.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ChanLY06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChenC06,
author = {Yi{-}Ping Phoebe Chen and
Qingfeng Chen},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Analyzing Inconsistency Toward Enhancing Integration of Biological
Molecular Databases},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {197--206},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/204.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ChenC06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChenLWSH06,
author = {Ching{-}Tai Chen and
Hsin{-}Nan Lin and
Kuen{-}Pin Wu and
Ting{-}Yi Sung and
Wen{-}Lian Hsu},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {A Knowledge-Based Approach to Protein Local Structure Prediction},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {257--266},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/217.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ChenLWSH06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChiS06,
author = {Pin{-}Hao Chi and
Chi{-}Ren Shyu},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Predicting Ranked {SCOP} Domains by Mining Associations of Visual
Contents in Distance Matrices},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {49--58},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/145.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ChiS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChinL06,
author = {Francis Y. L. Chin and
Henry C. M. Leung},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {An Efficient Algorithm for String Motif Discovery},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {79--88},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/153.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ChinL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChongNLP06,
author = {Ket Fah Chong and
Kang Ning and
Hon Wai Leong and
Pavel A. Pevzner},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Characterization of Multi-Charge Mass Spectra for Peptide Sequencing},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {109--119},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/162.pdf},
timestamp = {Fri, 03 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/ChongNLP06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/DasPD06,
author = {Sabyasachi Das and
Sandip Paul and
Chitra Dutta},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Trends in Codon and Amino Acid Usage in Human Pathogen Tropheryma
Whipplei, the only Known Actinobacteria with Reduced Genome},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {139--148},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/178.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/DasPD06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Han06,
author = {Xiaoxu Han},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Resolving the Gene Tree and Species Tree Problem by Phylogenetic Mining},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {287--296},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/235.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/Han06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/HortonPON06,
author = {Paul Horton and
Keun{-}Joon Park and
Takeshi Obayashi and
Kenta Nakai},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Protein Subcellular Localisation Prediction with WoLF {PSORT}},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {39--48},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/138.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/HortonPON06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/HuangFAPSMW06,
author = {Shao{-}Shan Huang and
Debra L. Fulton and
David J. Arenillas and
Paul Perco and
Shannan J. Ho Sui and
James R. Mortimer and
Wyeth W. Wasserman},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Identification of Over-Represented Combinations of Transcription Factor
Binding Sites in Sets of Co-Expressed Genes},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {247--256},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/216.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/HuangFAPSMW06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/HuangZDYL06,
author = {Minlie Huang and
Xiaoyan Zhu and
Shilin Ding and
Hao Yu and
Ming Li},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {{ONBRIRES:} Ontology-Based Biological Relation Extraction System},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {327--336},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/246.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/HuangZDYL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/JiangYCW06,
author = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Preface},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/preface.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/JiangYCW06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/JinKCC06,
author = {Hee{-}Jeong Jin and
Hye{-}Jung Kim and
Jeong{-}Hyeon Choi and
Hwan{-}Gue Cho},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {AlignScope: {A} Visual Mining Tool for Gene Team Finding with Whole
Genome Alignment},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {69--78},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/150.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/JinKCC06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/KawadaS06,
author = {Yuji Kawada and
Yasubumi Sakakibara},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Discriminative Detection of Cis-Acting Regulatory Variation From Location
Data},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {89--98},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/154.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/KawadaS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Konovalov06,
author = {Dmitry A. Konovalov},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Accuracy of Four Heuristics for the Full Sibship Reconstruction Problem
in the Presence of Genotype Errors},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {7--16},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/113.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/Konovalov06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Langmead06,
author = {Christopher James Langmead},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {A Randomized Algorithm for Learning Mahalanobis Metrics: Application
to Classification and Regression of Biological Data},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {217--226},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/209.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/Langmead06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Li06,
author = {Wen{-}Hsiung Li},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {On the Inference of Regulatory Elements, Circuits, and Modules},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {1},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/wenhsiung.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/Li06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/LiCC06,
author = {C. W. Li and
W. C. Chang and
B. S. Chen},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {System Identification and Robustness Analysis of the Circadian Regulatory
Network via Microarray Data in Arabidopsis Thaliana},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {27--37},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/127.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/LiCC06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/MaC06,
author = {Patrick C. H. Ma and
Keith C. C. Chan},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Inference of Gene Regulatory Networks from Microarray Data: {A} Fuzzy
Logic Approach},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {17--26},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/125.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/MaC06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/MaWLZ06,
author = {Yifei Ma and
Guoren Wang and
Yongguang Li and
Yuhai Zhao},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {{EDAM:} An Efficient Clique Discovery Algorithm with Frequency Transformation
for Finding Motifs},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {119--128},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/165.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/MaWLZ06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ManuchZSG06,
author = {J{\'{a}}n Manuch and
Xiaohong Zhao and
Ladislav Stacho and
Arvind Gupta},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Characterization of the Existence of Galled-Tree Networks},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {297--306},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/236.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ManuchZSG06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Ng06,
author = {Michael K. Ng},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {A Recursive Method for Solving Haplotype Frequencies in Multiple Loci
Linkage Analysis},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {129--138},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/168.pdf},
timestamp = {Wed, 03 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/Ng06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/PanW06,
author = {De Pan and
Fei Wang},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Gene Expression Data Clustering Based on Local Similarity Combination},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {353--362},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/249.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/PanW06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/PaulDD06,
author = {Sandip Paul and
Sabyasachi Das and
Chitra Dutta},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Consequences of Mutation, Selection, and Physico-Chemical Properties
of Encoded Proteins on Synonymous Codon Usage in Adenoviruses},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {149--158},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/182.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/PaulDD06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Ragan06,
author = {Mark A. Ragan},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Automating the Search for Lateral Gene Transfer},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {3},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/ragan.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/Ragan06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/RuthsN06,
author = {Derek A. Ruths and
Luay Nakhleh},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {{RECOMP:} {A} Parsimony-Based Method for Detecting Recombination},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {59--68},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/146.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/RuthsN06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/RuthsN06a,
author = {Derek A. Ruths and
Luay Nakhleh},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Techniques for Assessing Phylogenetic Branch Support: {A} Performance
Study},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {187--196},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/197.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/RuthsN06a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ShashikanthSMU06,
author = {M. Shashikanth and
A. Snethalatharani and
S. K. Mubarak and
K. Ulaganathan},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Genome Wide Computational Analysis of Small Nuclear {RNA} Genes for
Oryza Sativa (Indica and Japonica)},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {277--286},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/231.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ShashikanthSMU06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ShenT06,
author = {Li Shen and
Eng Chong Tan},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {A Generalized Output-Coding Scheme with {SVM} for Multiclass Microarray
Classification},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {179--186},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/192.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ShenT06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Sinoquet06,
author = {Christine Sinoquet},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {A Novel Approach for Structured Consensus Motif Inference Under Specificity
and Quorum Constraints},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {207--216},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/207.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/Sinoquet06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ThorvaldsenYF06,
author = {Steinar Thorvaldsen and
Elinor Ytterstad and
Tor Fl{\aa}},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Property-Dependent Analysis of Aligned Proteins from Two Or More Populations},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {169--178},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/189.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ThorvaldsenYF06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Waterman06,
author = {Michael S. Waterman},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Whole Genome Optical Mapping},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {5},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/waterman.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/Waterman06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/XieH06,
author = {Zhong{-}Ru Xie and
Ming{-}Jing Hwang},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {A New Neural Network for B-Turn Prediction: the Effect of Site-Specific
Amino Acid Preference},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {237--246},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/215.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/XieH06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/YangHLW06,
author = {Liang Huai Yang and
Wynne Hsu and
Mong{-}Li Lee and
Limsoon Wong},
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Identification of MicroRNA Precursors via {SVM}},
booktitle = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
pages = {267--276},
publisher = {Imperial College Press, London},
year = {2006},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2006/230.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/YangHLW06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/apbc/2006,
editor = {Tao Jiang and
Ueng{-}Cheng Yang and
Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February
2006, Taipei, Taiwan},
publisher = {Imperial College Press, London},
year = {2006},
isbn = {1-86094-623-2},
timestamp = {Wed, 15 Mar 2006 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/2006.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/BahadurTSHA05,
author = {Dukka Bahadur and
Etsuji Tomita and
Jun'ichi Suzuki and
Katsuhisa Horimoto and
Tatsuya Akutsu},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Clique-based algorithms for protein threading with profiles and constraints},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {51--64},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/146.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/BahadurTSHA05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/BodenH05,
author = {Mikael Bod{\'{e}}n and
John Hawkins},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Detecting residues in targeting peptides},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {131--140},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/195.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/BodenH05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/BondugulaDX05,
author = {Rajkumar Bondugula and
Ognen Duzlevski and
Dong Xu},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Profiles and fuzzy K-nearest neighbor algorithm for protein secondary
structure prediction},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {85--94},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/216.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/BondugulaDX05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/BulterWWZ05,
author = {Greg Butler and
Guang Wang and
Yue Wang and
Liqian Zou},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {A graph database with visual queries for genomics},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {31--40},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/107.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/BulterWWZ05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/CarvalhoFOS05,
author = {Alexandra M. Carvalho and
Ana T. Freitas and
Arlindo L. Oliveira and
Marie{-}France Sagot},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {A highly scalable algorithm for the extraction of CIS-regulatory regions},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {273--282},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/188.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/CarvalhoFOS05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChangFCPSW05,
author = {Hao{-}Teng Chang and
Tan{-}Chi Fan and
Margaret Dah{-}Tsyr Chang and
Tun{-}Wen Pai and
Bo{-}Han Su and
Pei{-}Chih Wu},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Unique peptide prediction of RNase family sequences based on reinforced
merging algorithms},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {289--298},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/142.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ChangFCPSW05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChenW05,
author = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Preface},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/preface.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ChenW05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChenZFNZLJ05,
author = {Xin Chen and
Jie Zheng and
Zheng Fu and
Peng Nan and
Yang Zhong and
Stefano Lonardi and
Tao Jiang},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Computing the Assignment of Orthologous Genes via Genome Rearrangement},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {363--378},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/taojiang.pdf},
timestamp = {Wed, 22 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ChenZFNZLJ05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChinL05,
author = {Francis Y. L. Chin and
Henry C. M. Leung},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Voting algorithms for discovering long motifs},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {261--271},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/212.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ChinL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChowdharyAB05,
author = {Rajesh Chowdhary and
R. Ayesha Ali and
Vladimir B. Bajic},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Modeling 5' regions of histone genes using Bayesian networks},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {283--288},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/138.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ChowdharyAB05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChuaS05,
author = {Hon Nian Chua and
Wing{-}Kin Sung},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {A better gap penalty for pairwise {SVM}},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {11--20},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/118.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ChuaS05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/DuanR05,
author = {Kaibo Duan and
Jagath C. Rajapakse},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {{SVM-RFE} peak selection for cancer classification with mass spectrometry
data},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {191--200},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/184.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/DuanR05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/FengPZ05,
author = {J. Feng and
Laxmi Parida and
Ruhong Zhou},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Protein folding trajectory analysis using patterned clusters},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {95--104},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/111.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/FengPZ05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/GuoLS05,
author = {Jian Guo and
Yuanlie Lin and
Zhirong Sun},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {A novel method for protein subcellular localization: Combining residue-couple
model and {SVM}},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {117--129},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/116.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/GuoLS05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/HeHJS05,
author = {Ying{-}Jun He and
Trinh N. D. Huynh and
Jesper Jansson and
Wing{-}Kin Sung},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Inferring phylogenetic relationships avoiding forbidden rooted triplets},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {339--348},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/173.pdf},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/HeHJS05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/HuangD05,
author = {Lei Huang and
Yang Dai},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {A support vector machine approach for prediction of {T} Cell epitopes},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {319--328},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/209.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/HuangD05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/HuangZ05,
author = {Zi Huang and
Xiaofang Zhou},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {High dimensional indexing for protein structure matching using bowties},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {21--30},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/204.pdf},
timestamp = {Wed, 13 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/HuangZ05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/KonwarMRS05,
author = {Kishori M. Konwar and
Ion I. Mandoiu and
Alexander Russell and
Alexander A. Shvartsman},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Improved algorithms for multiplex {PCR} primer set selection with
amplification length constraints},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {41--50},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/151.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/KonwarMRS05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Liang05,
author = {Kung{-}Hao Liang},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Cells In Silico {(CIS):} {A} biomedical simulation framework based
on Markov random field},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {151--160},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/196.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/Liang05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/LinHCCHK05,
author = {Feng{-}Mao Lin and
Hsien{-}Da Huang and
Yu{-}Chung Chang and
Pak{-}Leong Chan and
Jorng{-}Tzong Horng and
Ming{-}Tat Ko},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {A database to aid probe design for virus identification},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {309--318},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/180.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/LinHCCHK05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/LinLCLC05,
author = {Tsun{-}Chen Lin and
Ru{-}Sheng Liu and
Shu{-}Yuan Chen and
Chen{-}Chung Liu and
Chien{-}Yu Chen},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Genetic algorithms and silhouette measures applied to microarray data
classification},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {229--238},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/248.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/LinLCLC05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/LiuML05,
author = {Jian Liu and
Bin Ma and
Ming Li},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {{PRIME:} Peptide robust identification from {MS/MS} spectra},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {181--190},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/120.pdf},
timestamp = {Mon, 13 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/LiuML05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/MaetschkeTB05,
author = {Stefan Maetschke and
Michael Towsey and
Mikael Bod{\'{e}}n},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {{BLOMAP:} An encoding of amino acids which improves signal peptide
cleavage site prediction},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {141--150},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/123.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/MaetschkeTB05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/MatsunoIOFM05,
author = {Hiroshi Matsuno and
Shin{-}Ichi T. Inouye and
Yasuki Okitsu and
Yasushi Fujii and
Satoru Miyano},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {A new regulatory interaction suggested by simulations for circadian
genetic control mechanism in mammals},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {171--180},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/203.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/MatsunoIOFM05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Mishra05,
author = {Santosh K. Mishra},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Trends in bioinformatics research and Singapore's role},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {381},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/santosh.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/Mishra05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Nakamura05,
author = {Haruki Nakamura},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Protein informatics towards integration of data grid and computing
grid},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {359--362},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/nakamura.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/Nakamura05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/PapamichailSLM05,
author = {Dimitris Papamichail and
Steven Skiena and
C. Van Der Lelie and
S. R. McCorkle},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Bacterial population assay via k-mer analysis},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {299--308},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/130.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/PapamichailSLM05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/RajasekaranBH05,
author = {Sanguthevar Rajasekaran and
Sudha Balla and
Chun{-}Hsi Huang},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Exact algorithms for planted motif challenge problems},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {249--259},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/126.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/RajasekaranBH05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/RajasekaranBHTGMS05,
author = {Sanguthevar Rajasekaran and
Sudha Balla and
Chun{-}Hsi Huang and
Vishal Thapar and
Michael R. Gryk and
Mark W. Maciejewski and
Martin R. Schiller},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Exact algorithms for motif search},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {239--248},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/125.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/RajasekaranBHTGMS05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ShenT05,
author = {Li Shen and
Eng Chong Tan},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {{PLS} and {SVD} based penalized logistic regression for cancer classification
using microarray data},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {219--228},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/246.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ShenT05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ShiC05,
author = {Chao Shi and
Lihui Chen},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Feature dimension reduction for microarray data analysis using locally
linear embedding},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {211--217},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/162.pdf},
timestamp = {Thu, 02 Sep 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/ShiC05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/TanCCVB05,
author = {Sin Lam Tan and
Vidhu Choudhary and
Alan Christoffels and
Byrappa Venkatesh and
Vladimir B. Bajic},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Comparison of core promoters in Fugu rubripes and human},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {379},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/bajic.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/TanCCVB05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/WangCH05,
author = {Shiou{-}Ling Wang and
Chung{-}Ming Chen and
Ming{-}Jing Hwang},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Classification of protein 3D folds by hidden Markov learning on sequences
of structural alphabets},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {65--72},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/161.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/WangCH05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/WangF05,
author = {Xiuying Wang and
David Dagan Feng},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Hybrid registration for two-dimensional gel protein images},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {201--210},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/241.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/WangF05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/WangZLM05,
author = {Lusheng Wang and
Daming Zhu and
Xiaowen Liu and
Shaohan Ma},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {An O(N\({}^{\mbox{2}}\)) algorithm for signed translocation problem},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {349--358},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/186.pdf},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/WangZLM05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/WuLYW05,
author = {Gang Wu and
Guohui Lin and
Jia{-}Huai You and
Xiaomeng Wu},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Faster solution to the maximum quartet consistency problem with constraint
programming},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {329--338},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/128.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/WuLYW05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/XuBK05,
author = {Emily W. Xu and
Daniel G. Brown and
Paul Kearney},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {The use of functional domains to improve transmembrane protein topology
prediction},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {105--116},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/147.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/XuBK05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/XuYL05,
author = {Jinbo Xu and
Libo Yu and
Ming Li},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Consensus fold recognition by predicted model quality},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {73--83},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/236.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/XuYL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/YiuCLSTW05,
author = {Siu{-}Ming Yiu and
P. Y. Chan and
Tak Wah Lam and
Wing{-}Kin Sung and
Hing{-}Fung Ting and
Prudence W. H. Wong},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Allowing mismatches in anchors for wholw genome alignment: Generation
and effectiveness},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {1--10},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/192.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/YiuCLSTW05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ZhangTN05,
author = {Zhuo Zhang and
Suisheng Tang and
See{-}Kiong Ng},
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Toward discovering disease-specific gene networks from online literature},
booktitle = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
pages = {161--169},
publisher = {Imperial College Press, London},
year = {2005},
url = {http://www.comp.nus.edu.sg/\&\#126;wongls/psZ/apbc2005/camera-ready/201.pdf},
timestamp = {Tue, 24 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/ZhangTN05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/apbc/2005,
editor = {Yi{-}Ping Phoebe Chen and
Limsoon Wong},
title = {Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January
2005, Singapore},
publisher = {Imperial College Press, London},
year = {2005},
isbn = {1-86094-477-9},
timestamp = {Wed, 15 Mar 2006 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/2005.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/BahadurATS04,
author = {Dukka Bahadur and
Tatsuya Akutsu and
Etsuji Tomita and
Tomokazu Seki},
editor = {Yi{-}Ping Phoebe Chen},
title = {Protein Side-chain Packing Problem: {A} Maximum Edge-weight Clique
Algorithmic Approach},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {191--200},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Dukka.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/BahadurATS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/BiroB04,
author = {Jan C. Biro and
Josephine M. K. Biro},
editor = {Yi{-}Ping Phoebe Chen},
title = {Recognition Sequences in the Restriction Endonucleases},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {217--222},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Biro.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/BiroB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Bourne04,
author = {Philip E. Bourne},
editor = {Yi{-}Ping Phoebe Chen},
title = {The Future of Bioinformatics},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {3},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Bourne.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/Bourne04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Brown04,
author = {A. L. Brown},
editor = {Yi{-}Ping Phoebe Chen},
title = {Constructing Genome Scale Suffix Trees},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {105--112},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Brown.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/Brown04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/CarlssonC04,
author = {Mats Carlsson and
Nicolas Beldiceanu},
editor = {Yi{-}Ping Phoebe Chen},
title = {Dispensation Order Generation for Pyrosequencing},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {327--332},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Carlsson.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/CarlssonC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Carrizo04,
author = {Savrina F. Carrizo},
editor = {Yi{-}Ping Phoebe Chen},
title = {Phylogenetic Trees: An Information Visualisation Perspective},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {315--320},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Carrizo.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/Carrizo04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChattarajW04,
author = {Abhijit Chattaraj and
Hugh E. Williams},
editor = {Yi{-}Ping Phoebe Chen},
title = {Variable-length Intervals in Homology Search},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {85--91},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Chattaraj.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/ChattarajW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChenZHY04,
author = {Huiling Chen and
Huan{-}Xiang Zhou and
Xiaohua Hu and
Illhoi Yoo},
editor = {Yi{-}Ping Phoebe Chen},
title = {Classification Comparison of Prediction of Solvent Accessibility From
Protein Sequences},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {333--338},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Chen.html},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/ChenZHY04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/DattaD04,
author = {Somnath Datta and
Susmita Datta},
editor = {Yi{-}Ping Phoebe Chen},
title = {An Empirical Bayes Adjustment to Multiple p-values for the Detection
of Differentially Expressed Genes in Microarray Experiments},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {155--159},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Datta.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/DattaD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/DayalanBS04,
author = {Saravanan Dayalan and
Savitri Bevinakoppa and
Heiko Schr{\"{o}}der},
editor = {Yi{-}Ping Phoebe Chen},
title = {A Dihedral Angle Database of Short Sub-sequences for Protein Structure
Prediction},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {131--137},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Dayalan.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/DayalanBS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/DeogunDKM04,
author = {Jitender S. Deogun and
Ruben Donts and
Olga Komina and
Fangrui Ma},
editor = {Yi{-}Ping Phoebe Chen},
title = {{RNA} Secondary Structure Prediction with Simple Pseudoknots},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {239--246},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Deogun2.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/DeogunDKM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/DeogunYM04,
author = {Jitender S. Deogun and
Jingyi Yang and
Fangrui Ma},
editor = {Yi{-}Ping Phoebe Chen},
title = {{EMAGEN:} An Efficient Approach to Multiple Whole Genome Alignment},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {113--122},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Deogun1.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/DeogunYM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/DwyerRS04,
author = {Tim Dwyer and
Hardy Rolletschek and
Falk Schreiber},
editor = {Yi{-}Ping Phoebe Chen},
title = {Representing Experimental Biological Data in Metabolic Networks},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {13--20},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Dwyer.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/DwyerRS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Feng04,
author = {David Dagan Feng},
editor = {Yi{-}Ping Phoebe Chen},
title = {Molecular Imaging and Biomedical Process Modeling},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {5--10},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Feng.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/Feng04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/FukudaT04,
author = {Ken{-}ichiro Fukuda and
Toshihisa Takagi},
editor = {Yi{-}Ping Phoebe Chen},
title = {A Pathway Editor for Literature-based Knowledge Curation},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {339--344},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Fukuda.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/FukudaT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/GohSK04,
author = {Liang Goh and
Qun Song and
Nikola K. Kasabov},
editor = {Yi{-}Ping Phoebe Chen},
title = {A Novel Feature Selection Method to Improve Classification of Gene
Expression Data},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {161--166},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Goh.html},
timestamp = {Wed, 10 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/GohSK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/GoodeSDBR04,
author = {Matthew Goode and
Korbinian Strimmer and
Alexei J. Drummond and
Ed Buckler and
Allen G. Rodrigo},
editor = {Yi{-}Ping Phoebe Chen},
title = {A Brief Introduction to the Phylogentics Analysis Library {V1.5}},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {175--179},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Goode.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/GoodeSDBR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/GuoLS04,
author = {Jian Guo and
Yuanlie Lin and
Zhirong Sun},
editor = {Yi{-}Ping Phoebe Chen},
title = {A Novel Method for Protein Subcellular Localization Based on Boosting
and Probabilistic Neural Network.},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {21--27},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Guo.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/GuoLS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/HallS04,
author = {Ross Hall and
Linda Stern},
editor = {Yi{-}Ping Phoebe Chen},
title = {A Rapid Method of Whole Genome Visualisation Illustrating Features
in Both Coding and Non-coding Regions},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {285--290},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Hall.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/HallS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/HallinanW04,
author = {Jennifer Hallinan and
Janet Wiles},
editor = {Yi{-}Ping Phoebe Chen},
title = {Evolving Genetic Regulatory Networks Using an Artificial Genome},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {291--296},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Hallinan.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/HallinanW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/HeRJCS04,
author = {Jing He and
Desh Ranjan and
Wen Jiang and
Wah Chiu and
Michael F. Schmid},
editor = {Yi{-}Ping Phoebe Chen},
title = {Detecting Local Symmetry Axis in 3-dimensional Virus Structures},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {265--270},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29He.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/HeRJCS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/HeringIH04,
author = {Joachim A. Hering and
Peter R. Innocent and
Parvez I. Haris},
editor = {Yi{-}Ping Phoebe Chen},
title = {Empirical Knowledge and Genetic Algorithms for Selection of Amide
{I} Frequencies in Protein Secondary Structure Prediction},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {345--350},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Hering.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/HeringIH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/HoyMM04,
author = {Jason E. Sew Hoy and
Alan F. McCulloch and
John R. McDonald},
editor = {Yi{-}Ping Phoebe Chen},
title = {BRINet: {A} BioResource Integration Network},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {29--34},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Hoy.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/HoyMM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/HuY04,
author = {Xiaohua Hu and
Illhoi Yoo},
editor = {Yi{-}Ping Phoebe Chen},
title = {Cluster Ensemble and Its Applications in Gene Expression Analysis},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {297--302},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Hu.html},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/HuY04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/KaburagiMHSM04,
author = {Takashi Kaburagi and
Daigo Muramatsu and
Sho Hashimoto and
Masahiro Sasaki and
Takashi Matsumoto},
editor = {Yi{-}Ping Phoebe Chen},
title = {Transmembrane Region Prediction with Hydropathy Index/Charge Two-Dimensional
Trajectories of Stochastic Dynamical Systems},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {35--42},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Kaburagi.html},
timestamp = {Fri, 16 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/KaburagiMHSM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/KongTTW04,
author = {Waiming Kong and
Lawrence Tham and
Kee Yew Wong and
Patrick Tan},
editor = {Yi{-}Ping Phoebe Chen},
title = {Support Vector Machine Approach for Cancer Detection Using Amplified
Fragment Length Polymorphism {(AFLP)} Screening Method.},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {63--66},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Kong.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/KongTTW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/LaiKCW04,
author = {Paulo Lai and
Warren Kaplan and
W. Bret Church and
Raymond K. Wong},
editor = {Yi{-}Ping Phoebe Chen},
title = {Informative 3D Visualization of Multiple Protein Structures},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {201--208},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Lai.html},
timestamp = {Thu, 24 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/LaiKCW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/LiLW04,
author = {Jinyan Li and
Huiqing Liu and
Limsoon Wong},
editor = {Yi{-}Ping Phoebe Chen},
title = {Use of Built-in Features in the Interpretation of High-dimensional
Cancer Diagnosis Data.},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {67--74},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Li.html},
timestamp = {Tue, 06 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/LiLW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/LuoL04,
author = {Hong Luo and
Jingchu Luo},
editor = {Yi{-}Ping Phoebe Chen},
title = {Initial {SARS} Genome Data Analysis Using a Bioinformatics Platform},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {271--276},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Luo.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/LuoL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/MagliaLG04,
author = {Anne M. Maglia and
Jennifer L. Leopold and
Venkat Ram Ghatti},
editor = {Yi{-}Ping Phoebe Chen},
title = {Identifying Character Non-Independence in Phylogenetic Data Using
Data Mining Techniques},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {181--189},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Maglia.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/MagliaLG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/McLachlanCMAZ04,
author = {Geoffrey J. McLachlan and
Soong Chang and
Jess Mar and
Christophe Ambroise and
Justin Xi Zhu},
editor = {Yi{-}Ping Phoebe Chen},
title = {On the Simultaneous Use of Clinical and Microarray Expression Data
in the Cluster Analysis of Tissue Samples},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {167--171},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29McLachlan.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/McLachlanCMAZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/MeintjesR04,
author = {Peter L. Meintjes and
Allen G. Rodrigo},
editor = {Yi{-}Ping Phoebe Chen},
title = {Evolution of Relative Synonymous Codon Usage in Human Immunodeficiency
Virus Type 1},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {277--282},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Meintjes.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/MeintjesR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/NagasakiDMM04,
author = {Masao Nagasaki and
Atsushi Doi and
Hiroshi Matsuno and
Satoru Miyano},
editor = {Yi{-}Ping Phoebe Chen},
title = {Integrating Biopathway Databases for Large-scale Modeling and Simulation},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {43--52},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Nagasaki.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/NagasakiDMM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/NeuhauserL04,
author = {Markus Neuh{\"{a}}user and
Fred C. Lam},
editor = {Yi{-}Ping Phoebe Chen},
title = {Nonparametric Approaches to Detecting Differentially Expressed Genes
in Replicated Microarray Experiments},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {139--143},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Neuhauser.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/NeuhauserL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/NgZO04,
author = {See{-}Kiong Ng and
Zexuan Zhu and
Yew{-}Soon Ong},
editor = {Yi{-}Ping Phoebe Chen},
title = {Whole-Genome Functional Classification of Genes by Latent Semantic
Analysis on Microarray Data},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {123--129},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Ng.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/NgZO04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/NicolauN04,
author = {Dan V. Nicolau Jr. and
Dan V. Nicolau},
editor = {Yi{-}Ping Phoebe Chen},
title = {Towards a Theory of Protein Adsorption: Predicting the Adsorption
of Proteins on Surfaces via a Piecewise Linear Model},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {351--356},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Nicolau.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/NicolauN04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/PaiCCCT04,
author = {Tun{-}Wen Pai and
Margaret Dah{-}Tsyr Chang and
Jia{-}Han Chu and
Wei{-}Yuan Chang and
Hsiu Ling Tai},
editor = {Yi{-}Ping Phoebe Chen},
title = {Ladderlike Stepping and Interval Jumping Searching Algorithms for
{DNA} Sequences},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {93--98},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Pai.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/PaiCCCT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/RiazWL04,
author = {Tariq Riaz and
Yi Wang and
Kuo{-}Bin Li},
editor = {Yi{-}Ping Phoebe Chen},
title = {Multiple Sequence Alignment Using Tabu Search},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {223--232},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Riaz.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/RiazWL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/SaraiSGK04,
author = {Akinori Sarai and
Samuel Selvaraj and
M. Michael Gromiha and
Hidetoshi Kono},
editor = {Yi{-}Ping Phoebe Chen},
title = {Structure-Function Relationship in {DNA} Sequence Recognition by Transcription
Factors},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {233--238},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Sarai.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/SaraiSGK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ShehadiUMIO04,
author = {Ihsan A. Shehadi and
Alper Uzun and
Leonel F. Murga and
Valentin A. Ilyin and
Mary Jo Ondrechen},
editor = {Yi{-}Ping Phoebe Chen},
title = {{THEMATICS} is Effective for Active Site Prediction in Comparative
Model Structures},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {209--215},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Shehadi.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/ShehadiUMIO04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/SunS04,
author = {Zhaohui Sun and
Jitender S. Deogun},
editor = {Yi{-}Ping Phoebe Chen},
title = {Local Prediction Approach of Protein Classification using Probabilistic
Suffix Trees},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {357--362},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Sun.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/SunS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/WangLYW04,
author = {Daolong Wang and
Mario Lauria and
Bo Yuan and
Fred A. Wright},
editor = {Yi{-}Ping Phoebe Chen},
title = {Mega Weaver: {A} Simple Iterative Approach for {BAC} Consensus Assembly},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {145--153},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Wang.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/WangLYW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/WongLMYKLC04,
author = {Prudence W. H. Wong and
Tak Wah Lam and
Y. C. Mui and
Siu{-}Ming Yiu and
Hsiang{-}fu Kung and
Marie C. M. Lin and
Y. T. Cheung},
editor = {Yi{-}Ping Phoebe Chen},
title = {Filtering of Ineffective siRNAs and Improved siRNA Design Tool},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {247--255},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Wong.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/WongLMYKLC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/WuCSW04,
author = {Xiaoming Wu and
Bo Wang and
Changxin Song and
Jingzhi Cheng},
editor = {Yi{-}Ping Phoebe Chen},
title = {A Combined Model and a Varied Gibbs Sampling Algorithm Used for Motif
Discovery},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {99--104},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Wu.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/WuCSW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Wunsche04,
author = {Burkhard W{\"{u}}nsche},
editor = {Yi{-}Ping Phoebe Chen},
title = {Advanced Texturing Techniques for the Effective Visualization of Neoroanatomy
from Diffusion Tensor Imaging Data},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {303--308},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Wuensche.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/Wunsche04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/YaoWLNSZLPLQ04,
author = {Daming Yao and
Jingbo Wang and
Yanmei Lu and
Nathan Noble and
Huandong Sun and
Xiaoyan Zhu and
Nan Lin and
Donald G. Payan and
Ming Li and
Kunbin Qu},
editor = {Yi{-}Ping Phoebe Chen},
title = {PathwayFinder: Paving the Way Towards Automatic Pathway Extraction},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {53--62},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Yao.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/YaoWLNSZLPLQ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/YeungYLSYK04,
author = {Lap Kun Yeung and
Hong Yan and
Alan Wee{-}Chung Liew and
Lap Keung Szeto and
Michael Yang and
Richard Kong},
editor = {Yi{-}Ping Phoebe Chen},
title = {Measuring Correlation between Microarray Time-series Data using Dominant
Spectrum Component},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {309--314},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Yeung.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/YeungYLSYK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/YuA04,
author = {Zu{-}Guo Yu and
Vo Anh},
editor = {Yi{-}Ping Phoebe Chen},
title = {Phylogenetic Tree of Prokaryotes Based on the Complete Genomes using
Fractal and Correlation Analyses},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {321--326},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Yu2.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/YuA04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/YuCCY04,
author = {Larry T. H. Yu and
Fu{-}Lai Chung and
Stephen Chi{-}fai Chan and
Simon M. C. Yuen},
editor = {Yi{-}Ping Phoebe Chen},
title = {Using Emerging Pattern Based Projected Clustering and Gene Expression
Data for Cancer Detection},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {75--84},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Yu.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/YuCCY04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/YuWD04,
author = {Ying Yu and
Lusheng Wang and
Xiaotie Deng},
editor = {Yi{-}Ping Phoebe Chen},
title = {Exact Pattern Matching for {RNA} Secondary Structures},
booktitle = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
pages = {257--263},
publisher = {Australian Computer Society},
year = {2004},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV29Xu.html},
timestamp = {Wed, 15 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/YuWD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/apbc/2004,
editor = {Yi{-}Ping Phoebe Chen},
title = {Second Asia-Pacific Bioinformatics Conference {(APBC} 2004), January
18-22, 2004, Dunedin, New Zealand},
series = {{CRPIT}},
volume = {29},
publisher = {Australian Computer Society},
year = {2004},
isbn = {1-920682-11-2},
timestamp = {Wed, 18 Aug 2004 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/2004.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/BajicBLNW03,
author = {Vladimir B. Bajic and
Vladimir Brusic and
Jinyan Li and
See{-}Kiong Ng and
Limsoon Wong},
editor = {Yi{-}Ping Phoebe Chen},
title = {From Informatics to Bioinformatics},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {3--12},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Bajic.html},
timestamp = {Tue, 06 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/BajicBLNW03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/BlackwellR03,
author = {Bruce Blackwell and
Siva Ravada},
editor = {Yi{-}Ping Phoebe Chen},
title = {Oracle's Technology for Bioinformatics and Future Directions},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {35--42},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Blackwell.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/BlackwellR03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/BorschbachLMN03,
author = {Markus Borschbach and
Wolfram{-}Manfred Lippe and
C. Mertens and
S. Niedieck},
editor = {Yi{-}Ping Phoebe Chen},
title = {Analysing MEG-Data by a Combination of Different Neural Networks},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {181--188},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Borschbach.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/BorschbachLMN03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/BrownJS03,
author = {Chris M. Brown and
Grant H. Jacobs and
Mark J. Schreiber},
editor = {Yi{-}Ping Phoebe Chen},
title = {Signals in mRNAs that Influence the Initiation of Translation},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {203--206},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Brown.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/BrownJS03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Caldon03,
author = {Patrick Caldon},
editor = {Yi{-}Ping Phoebe Chen},
title = {Using Text Classification to Predict the Gene Knockout Behaviour of
S. Cerevisiae},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {211--214},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Caldon.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/Caldon03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChangLLK03,
author = {Hsuan T. Chang and
Neng{-}Wen Lo and
Wei C. Lu and
Chung J. Kuo},
editor = {Yi{-}Ping Phoebe Chen},
title = {Visualisation and Comparison of {DNA} Sequences by Use of Three-Dimensional
Trajectories},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {81--85},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Chang.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/ChangLLK03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ChoW03,
author = {Sung{-}Bae Cho and
Hong{-}Hee Won},
editor = {Yi{-}Ping Phoebe Chen},
title = {Machine Learning in {DNA} Microarray Analysis for Cancer Classification},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {189--198},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Cho.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/ChoW03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/DalrympleWKJ03,
author = {Brian P. Dalrymple and
Gene Wijffels and
Kritaya Kongsuwan and
Philip J. Jennings},
editor = {Yi{-}Ping Phoebe Chen},
title = {Towards an understanding of protein-protein interaction network heirarchies.
Analysis of DnaN-binding peptide motifs in members of protein families
interacting with the eubacterial processivity clamp, the subunit of
{DNA} Polymerase {III}},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {153--162},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Dalrymple.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/DalrympleWKJ03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/KasabovML03,
author = {Nikola K. Kasabov and
Melanie Middlemiss and
T. Lane},
editor = {Yi{-}Ping Phoebe Chen},
title = {A Generic Connectionist-Based Method for On-Line Feature Selection
and Modelling with a Case Study of Gene Expression Data Analysis},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {199--202},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Kasabov.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/KasabovML03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/KeithABMCL03,
author = {Jonathan M. Keith and
Peter Adams and
Darryn E. Bryant and
Keith R. Mitchelson and
Duncan A. E. Cochran and
Gita H. Lala},
editor = {Yi{-}Ping Phoebe Chen},
title = {Inferring an Original Sequence from Erroneous Copies : {A} Bayesian
Approach},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {23--28},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Keith.html},
timestamp = {Mon, 18 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/apbc/KeithABMCL03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/KurataBSD03,
author = {Ken{-}ichi Kurata and
Vincent Breton and
Christian Saguez and
Gerald Dine},
editor = {Yi{-}Ping Phoebe Chen},
title = {Evaluation of Unique Sequences on the European Data Grid},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {43--52},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Kurata.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/KurataBSD03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/LambrixJ03,
author = {Patrick Lambrix and
Vaida Jakoniene},
editor = {Yi{-}Ping Phoebe Chen},
title = {Towards Transparent Access to Multiple Biological Databanks},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {53--60},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Lambrix.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/LambrixJ03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/LiO03,
author = {Jinyan Li and
Hwee{-}Leng Ong},
editor = {Yi{-}Ping Phoebe Chen},
title = {Feature Space Transformation and Decision Results Interpretation},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {129--137},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Li.html},
timestamp = {Wed, 07 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/LiO03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/MarM03,
author = {J. C. Mar and
Geoffrey J. McLachlan},
editor = {Yi{-}Ping Phoebe Chen},
title = {Model-Based Clustering in Gene Expression Microarrays: An Application
to Breast Cancer Data},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {139--144},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Mar.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/MarM03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/NicolauFN03,
author = {Dan V. Nicolau Jr. and
Florin Fulga and
Dan V. Nicolau},
editor = {Yi{-}Ping Phoebe Chen},
title = {A New Program to Compute the Surface Properties of Biomolecules},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {29--34},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Nicolau.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/NicolauFN03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/PalopoliT03,
author = {Luigi Palopoli and
Giorgio Terracina},
editor = {Yi{-}Ping Phoebe Chen},
title = {A Framework for Improving Protein Structure Predictions by Teamwork},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {163--171},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Palopoli.html},
timestamp = {Mon, 18 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/PalopoliT03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Schreiber03,
author = {Falk Schreiber},
editor = {Yi{-}Ping Phoebe Chen},
title = {Comparison of Metabolic Pathways using Constraint Graph Drawing},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {105--110},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Schreiber.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/Schreiber03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/SegalB03,
author = {Tariq Segal and
Ross Barnard},
editor = {Yi{-}Ping Phoebe Chen},
title = {Let the Shoemaker Make the Shoes - An Abstraction Layer is Needed
Between Bioinformatic Analysis, Tools, Data and Equipment : An Agenda
for the Next Five Years},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {215--218},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Segal.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/SegalB03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/ShuiWGLC03,
author = {William M. Shui and
Raymond K. Wong and
Stephen C. Graham and
Lawrence K. Lee and
W. Bret Church},
editor = {Yi{-}Ping Phoebe Chen},
title = {A New Approach to Protein Structure and Function Analysis Using Semi-structured
Databases},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {61--69},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Shui.html},
timestamp = {Thu, 24 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/ShuiWGLC03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/SzetoLYT03,
author = {Lap Keung Szeto and
Alan Wee{-}Chung Liew and
Hong Yan and
Sy{-}sen Tang},
editor = {Yi{-}Ping Phoebe Chen},
title = {Gene Expression Data Clustering and Visualization Based on a Binary
Heirarchical Clustering Framework},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {145--152},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Szeto.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/SzetoLYT03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/TanG03,
author = {Aik Choon Tan and
David R. Gilbert},
editor = {Yi{-}Ping Phoebe Chen},
title = {An Empirical Comparison of Supervised Machine Learning Techniques
in Bioinformatics},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {219--222},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Tan.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/TanG03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/TyrelleK03,
author = {Greg D. Tyrelle and
Garry C. King},
editor = {Yi{-}Ping Phoebe Chen},
title = {A Platform for the Description, Distribution and Analysis of Genetic
Polymorphism Data},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {173--180},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Tyrelle.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/TyrelleK03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/WangFH03,
author = {Xiuying Wang and
David Dagan Feng and
Hai Hong},
editor = {Yi{-}Ping Phoebe Chen},
title = {Novel Elastic Registration for 2-D Medical and Gel Protein Images},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {223--226},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19XWang.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/WangFH03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/WangOOT03,
author = {Hao Wang and
Twee{-}Hee Ong and
Beng Chin Ooi and
Kian{-}Lee Tan},
editor = {Yi{-}Ping Phoebe Chen},
title = {{BLAST++} : {A} Tool for BLASTing Queries in Batches},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {71--79},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19HWang.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/WangOOT03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/WuY03,
author = {Shuanhu Wu and
Hong Yan},
editor = {Yi{-}Ping Phoebe Chen},
title = {Microarray Image Processing Based on Clustering and Morphological
Analysis},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {111--118},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Wu.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/WuY03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apbc/Wunsche03,
author = {Burkhard W{\"{u}}nsche},
editor = {Yi{-}Ping Phoebe Chen},
title = {The Visualization and Measurement of Left Ventricular Deformation},
booktitle = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
pages = {119--128},
publisher = {Australian Computer Society},
year = {2003},
url = {http://crpit.scem.westernsydney.edu.au/abstracts/CRPITV19Wuensche.html},
timestamp = {Thu, 25 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/Wunsche03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/apbc/2003,
editor = {Yi{-}Ping Phoebe Chen},
title = {First Asia-Pacific Bioinformatics Conference {(APBC} 2003), February
4-7, 2003, Adelaide, Australia},
series = {{CRPIT}},
volume = {19},
publisher = {Australian Computer Society},
year = {2003},
isbn = {0-909-92597-6},
timestamp = {Wed, 18 Aug 2004 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apbc/2003.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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