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@article{DBLP:journals/mta/XieZJL24,
author = {Bo Xie and
Yi Zhuang and
Nan Jiang and
Jingkun Liu},
title = {An effective and efficient framework of content-based similarity retrieval
of large {CT} image sequences based on {WSLEN} model},
journal = {Multim. Tools Appl.},
volume = {83},
number = {9},
pages = {27435--27462},
year = {2024},
url = {https://doi.org/10.1007/s11042-023-16226-8},
doi = {10.1007/S11042-023-16226-8},
timestamp = {Sat, 16 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/mta/XieZJL24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2402-04599,
author = {Lei Wang and
Jun Liu and
Liang Zheng and
Tom Gedeon and
Piotr Koniusz},
title = {Meet {JEANIE:} a Similarity Measure for 3D Skeleton Sequences via
Temporal-Viewpoint Alignment},
journal = {CoRR},
volume = {abs/2402.04599},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2402.04599},
doi = {10.48550/ARXIV.2402.04599},
eprinttype = {arXiv},
eprint = {2402.04599},
timestamp = {Sat, 13 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2402-04599.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2402-14482,
author = {Alfred Ferrer Florensa and
Jos{\'{e}} Juan Almagro Armenteros and
Henrik Nielsen and
Frank M{\o}ller Aarestrup and
Philip Thomas Lanken Conradsen Clausen},
title = {SpanSeq: Similarity-based sequence data splitting method for improved
development and assessment of deep learning projects},
journal = {CoRR},
volume = {abs/2402.14482},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2402.14482},
doi = {10.48550/ARXIV.2402.14482},
eprinttype = {arXiv},
eprint = {2402.14482},
timestamp = {Fri, 22 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2402-14482.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/apin/PeiZNZ23,
author = {Jihong Pei and
Jichen Zhang and
Ziyang Ni and
Yang Zhao},
title = {A novel video-based pedestrian re-identification method of sequence
feature distribution similarity measurement combined with deep learning},
journal = {Appl. Intell.},
volume = {53},
number = {9},
pages = {9779--9798},
year = {2023},
url = {https://doi.org/10.1007/s10489-022-04021-1},
doi = {10.1007/S10489-022-04021-1},
timestamp = {Thu, 15 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/apin/PeiZNZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LeeHHLMHBDTLP23,
author = {Sanghun Lee and
Georg Hahn and
Julian Hecker and
Sharon Marie Lutz and
Kristina Mullin and
Winston Hide and
Lars Bertram and
Dawn L. Demeo and
Rudolph E. Tanzi and
Christoph Lange and
Dmitry Prokopenko},
title = {A comparison between similarity matrices for principal component analysis
to assess population stratification in sequenced genetic data sets},
journal = {Briefings Bioinform.},
volume = {24},
number = {1},
year = {2023},
url = {https://doi.org/10.1093/bib/bbac611},
doi = {10.1093/BIB/BBAC611},
timestamp = {Sat, 25 Feb 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/LeeHHLMHBDTLP23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BastollaAP23,
author = {Ugo Bastolla and
David Abia and
Oscar Piette},
title = {PC{\_}ali: a tool for improved multiple alignments and evolutionary
inference based on a hybrid protein sequence and structure similarity
score},
journal = {Bioinform.},
volume = {39},
number = {10},
year = {2023},
url = {https://doi.org/10.1093/bioinformatics/btad630},
doi = {10.1093/BIOINFORMATICS/BTAD630},
timestamp = {Fri, 22 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BastollaAP23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GreenbergRS23,
author = {Grant Greenberg and
Aditya Narayan Ravi and
Ilan Shomorony},
title = {LexicHash: sequence similarity estimation via lexicographic comparison
of hashes},
journal = {Bioinform.},
volume = {39},
number = {10},
year = {2023},
url = {https://doi.org/10.1093/bioinformatics/btad652},
doi = {10.1093/BIOINFORMATICS/BTAD652},
timestamp = {Fri, 15 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GreenbergRS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/elektrik/KadiogluE23,
author = {Tevfik Kadioglu and
Burcu Erkmen},
title = {{BASISMAP:} sequence-based similarity search for geomagnetic positioning},
journal = {Turkish J. Electr. Eng. Comput. Sci.},
volume = {31},
number = {1},
pages = {146--162},
year = {2023},
url = {https://doi.org/10.55730/1300-0632.3976},
doi = {10.55730/1300-0632.3976},
timestamp = {Thu, 23 Feb 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/elektrik/KadiogluE23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ipm/SattiHASACL23,
author = {Fahad Ahmed Satti and
Musarrat Hussain and
Syed Imran Ali and
Misha Saleem and
Husnain Ali and
TaeChoong Chung and
Sungyoung Lee},
title = {A semantic sequence similarity based approach for extracting medical
entities from clinical conversations},
journal = {Inf. Process. Manag.},
volume = {60},
number = {2},
pages = {103213},
year = {2023},
url = {https://doi.org/10.1016/j.ipm.2022.103213},
doi = {10.1016/J.IPM.2022.103213},
timestamp = {Mon, 01 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ipm/SattiHASACL23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jaihc/RaiBG23,
author = {Sawan Rai and
Ramesh Chandra Belwal and
Atul Gupta},
title = {Accurate module name prediction using similarity based and sequence
generation models},
journal = {J. Ambient Intell. Humaniz. Comput.},
volume = {14},
number = {9},
pages = {11531--11543},
year = {2023},
url = {https://doi.org/10.1007/s12652-022-03722-2},
doi = {10.1007/S12652-022-03722-2},
timestamp = {Sun, 06 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jaihc/RaiBG23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mta/JiangZ23,
author = {Nan Jiang and
Yi Zhuang},
title = {Privacy-preserving personalized similarity retrieval of large {CT}
image sequences},
journal = {Multim. Tools Appl.},
volume = {82},
number = {13},
pages = {20407--20429},
year = {2023},
url = {https://doi.org/10.1007/s11042-022-14114-1},
doi = {10.1007/S11042-022-14114-1},
timestamp = {Fri, 28 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/mta/JiangZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/pcs/BurdonovM23,
author = {I. Burdonov and
A. Maksimov},
title = {Twenty Similarity Functions for Two Finite Sequences},
journal = {Program. Comput. Softw.},
volume = {49},
number = {5},
pages = {373--387},
year = {2023},
url = {https://doi.org/10.1134/S0361768823050031},
doi = {10.1134/S0361768823050031},
timestamp = {Tue, 17 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/pcs/BurdonovM23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/HornungT23,
author = {Bastian Volker Helmut Hornung and
Nicolas Terrapon},
title = {An objective criterion to evaluate sequence-similarity networks helps
in dividing the protein family sequence space},
journal = {PLoS Comput. Biol.},
volume = {19},
number = {8},
year = {2023},
url = {https://doi.org/10.1371/journal.pcbi.1010881},
doi = {10.1371/JOURNAL.PCBI.1010881},
timestamp = {Sat, 14 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/HornungT23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/LiL23,
author = {Hongliang Li and
Bin Liu},
title = {BioSeq-Diabolo: Biological sequence similarity analysis using Diabolo},
journal = {PLoS Comput. Biol.},
volume = {19},
number = {6},
year = {2023},
url = {https://doi.org/10.1371/journal.pcbi.1011214},
doi = {10.1371/JOURNAL.PCBI.1011214},
timestamp = {Wed, 01 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/LiL23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/Qiu23,
author = {Xiangyun Qiu},
title = {Sequence similarity governs generalizability of de novo deep learning
models for {RNA} secondary structure prediction},
journal = {PLoS Comput. Biol.},
volume = {19},
number = {4},
year = {2023},
url = {https://doi.org/10.1371/journal.pcbi.1011047},
doi = {10.1371/JOURNAL.PCBI.1011047},
timestamp = {Fri, 06 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/Qiu23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tgis/FanWWGL23a,
author = {Yue Fan and
Huiwen Wang and
Lihong Wang and
Shu Guo and
Jing Liu},
title = {A novel trajectory similarity measurement method based on node-sequence
hierarchical digraph},
journal = {Trans. {GIS}},
volume = {27},
number = {8},
pages = {2320--2342},
year = {2023},
url = {https://doi.org/10.1111/tgis.13121},
doi = {10.1111/TGIS.13121},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tgis/FanWWGL23a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bdcloud/YiLDZL023,
author = {Xiaoyu Yi and
Gaolei Li and
Ao Ding and
Yan Zheng and
Yuqing Li and
Jianhua Li},
title = {AdvBinSD: Poisoning the Binary Code Similarity Detector via Isolated
Instruction Sequences},
booktitle = {{IEEE} Intl Conf on Parallel {\&} Distributed Processing with
Applications, Big Data {\&} Cloud Computing, Sustainable Computing
{\&} Communications, Social Computing {\&} Networking, ISPA/BDCloud/SocialCom/SustainCom,
2023, Wuhan, China, December 21-24, 2023},
pages = {1149--1156},
publisher = {{IEEE}},
year = {2023},
url = {https://doi.org/10.1109/ISPA-BDCloud-SocialCom-SustainCom59178.2023.00183},
doi = {10.1109/ISPA-BDCLOUD-SOCIALCOM-SUSTAINCOM59178.2023.00183},
timestamp = {Thu, 18 Apr 2024 16:12:26 +0200},
biburl = {https://dblp.org/rec/conf/bdcloud/YiLDZL023.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/caasafeproc/WangHLWC23,
author = {Zhe Wang and
Wenkai Hu and
Yupeng Li and
Xiongbo Wan and
Weihua Cao},
title = {A similarity analysis method for hybrid sequences of alarm events
and trend events},
booktitle = {{CAA} Symposium on Fault Detection, Supervision and Safety for Technical
Processes, {SAFEPROCESS} 2023, Yibin, China, September 22-24, 2023},
pages = {1--6},
publisher = {{IEEE}},
year = {2023},
url = {https://doi.org/10.1109/SAFEPROCESS58597.2023.10295938},
doi = {10.1109/SAFEPROCESS58597.2023.10295938},
timestamp = {Thu, 16 Nov 2023 16:58:41 +0100},
biburl = {https://dblp.org/rec/conf/caasafeproc/WangHLWC23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hci/WangLF23,
author = {Huihui Wang and
Yanyu Lu and
Shan Fu},
editor = {Don Harris and
Wen{-}Chin Li},
title = {The Similarity Recognition of Pilots' Operational Action Sequence
Based on Blocked Dynamic Time Warping during a Flight Mission},
booktitle = {Engineering Psychology and Cognitive Ergonomics - 20th International
Conference, {EPCE} 2023, Held as Part of the 25th {HCI} International
Conference, {HCII} 2023, Copenhagen, Denmark, July 23-28, 2023, Proceedings,
Part {I}},
series = {Lecture Notes in Computer Science},
volume = {14017},
pages = {253--263},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-3-031-35392-5\_20},
doi = {10.1007/978-3-031-35392-5\_20},
timestamp = {Thu, 13 Jul 2023 10:09:58 +0200},
biburl = {https://dblp.org/rec/conf/hci/WangLF23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iiswc/EsfahaniBVKV23,
author = {Mohsen Koohi Esfahani and
Paolo Boldi and
Hans Vandierendonck and
Peter Kilpatrick and
Sebastiano Vigna},
title = {Dataset Announcement: MS-BioGraphs, Trillion-Scale Public Real-World
Sequence Similarity Graphs},
booktitle = {{IEEE} International Symposium on Workload Characterization, {IISWC}
2023, Ghent, Belgium, October 1-3, 2023},
pages = {193--195},
publisher = {{IEEE}},
year = {2023},
url = {https://doi.org/10.1109/IISWC59245.2023.00029},
doi = {10.1109/IISWC59245.2023.00029},
timestamp = {Tue, 28 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iiswc/EsfahaniBVKV23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/mie/Chen23,
author = {Ya{-}Lin Chen},
editor = {Maria H{\"{a}}gglund and
Madeleine Blusi and
Stefano Bonacina and
Lina Nilsson and
Inge Cort Madsen and
Sylvia Pelayo and
Anne Moen and
Arriel Benis and
Lars Lindsk{\"{o}}ld and
Parisis Gallos},
title = {Combining Sequence Similarity with Physicochemical Properties to Predict
Binders for {MHC-II} Molecules},
booktitle = {Caring is Sharing - Exploiting the Value in Data for Health and Innovation
- Proceedings of {MIE} 2023, Gothenburg, Sweden, 22 - 25 May 2023},
series = {Studies in Health Technology and Informatics},
volume = {302},
pages = {1067--1068},
publisher = {{IOS} Press},
year = {2023},
url = {https://doi.org/10.3233/SHTI230348},
doi = {10.3233/SHTI230348},
timestamp = {Fri, 07 Jul 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/mie/Chen23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2301-08403,
author = {Amir Kazemi and
Salar Basiri and
Volodymyr V. Kindratenko and
Srinivasa M. Salapaka},
title = {Sequence Generation via Subsequence Similarity: Theory and Application
to {UAV} Identification},
journal = {CoRR},
volume = {abs/2301.08403},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2301.08403},
doi = {10.48550/ARXIV.2301.08403},
eprinttype = {arXiv},
eprint = {2301.08403},
timestamp = {Thu, 26 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2301-08403.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2308-05118,
author = {Daniel H. Um and
David A. Knowles and
Gail E. Kaiser},
title = {Vector Embeddings by Sequence Similarity and Context for Improved
Compression, Similarity Search, Clustering, Organization, and Manipulation
of cDNA Libraries},
journal = {CoRR},
volume = {abs/2308.05118},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2308.05118},
doi = {10.48550/ARXIV.2308.05118},
eprinttype = {arXiv},
eprint = {2308.05118},
timestamp = {Thu, 24 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2308-05118.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2308-16744,
author = {Mohsen Koohi Esfahani and
Paolo Boldi and
Hans Vandierendonck and
Peter Kilpatrick and
Sebastiano Vigna},
title = {MS-BioGraphs: Sequence Similarity Graph Datasets},
journal = {CoRR},
volume = {abs/2308.16744},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2308.16744},
doi = {10.48550/ARXIV.2308.16744},
eprinttype = {arXiv},
eprint = {2308.16744},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2308-16744.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2311-17965,
author = {Manal Helal and
Fanrong Kong and
Sharon C. A. Chen and
Michael Bain and
Richard Christen and
Vitali Sintchenko},
title = {Defining Reference Sequences for Nocardia Species by Similarity and
Clustering Analyses of 16S rRNA Gene Sequence Data},
journal = {CoRR},
volume = {abs/2311.17965},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2311.17965},
doi = {10.48550/ARXIV.2311.17965},
eprinttype = {arXiv},
eprint = {2311.17965},
timestamp = {Thu, 14 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2311-17965.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/access/ZhuangJ22,
author = {Yi Zhuang and
Nan Jiang},
title = {Privacy-Preserving Distributed Similarity Retrieval of Large {CT}
Image Sequence Database in Mobile Telemedicine Networks},
journal = {{IEEE} Access},
volume = {10},
pages = {57339--57351},
year = {2022},
url = {https://doi.org/10.1109/ACCESS.2022.3178705},
doi = {10.1109/ACCESS.2022.3178705},
timestamp = {Fri, 29 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/access/ZhuangJ22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SamsonLM22,
author = {St{\'{e}}phane Samson and
Etienne Lord and
Vladimir Makarenkov},
title = {SimPlot++: a Python application for representing sequence similarity
and detecting recombination},
journal = {Bioinform.},
volume = {38},
number = {11},
pages = {3118--3120},
year = {2022},
url = {https://doi.org/10.1093/bioinformatics/btac287},
doi = {10.1093/BIOINFORMATICS/BTAC287},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SamsonLM22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChiuO22,
author = {Jimmy Ka Ho Chiu and
Rick Twee{-}Hee Ong},
title = {Clustering biological sequences with dynamic sequence similarity threshold},
journal = {{BMC} Bioinform.},
volume = {23},
number = {1},
pages = {108},
year = {2022},
url = {https://doi.org/10.1186/s12859-022-04643-9},
doi = {10.1186/S12859-022-04643-9},
timestamp = {Wed, 20 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChiuO22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cbm/AzimWD22,
author = {Riasat Azim and
Shulin Wang and
Shoaib Ahmed Dipu},
title = {CDSImpute: An ensemble similarity imputation method for single-cell
{RNA} sequence dropouts},
journal = {Comput. Biol. Medicine},
volume = {146},
pages = {105658},
year = {2022},
url = {https://doi.org/10.1016/j.compbiomed.2022.105658},
doi = {10.1016/J.COMPBIOMED.2022.105658},
timestamp = {Mon, 29 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cbm/AzimWD22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cbm/MaYWZSHXZ22,
author = {Minfei Ma and
Yanqing Yang and
Leyun Wu and
Liping Zhou and
Yulong Shi and
Jiaxin Han and
Zhijian Xu and
Weiliang Zhu},
title = {Conserved protein targets for developing pan-coronavirus drugs based
on sequence and 3D structure similarity analyses},
journal = {Comput. Biol. Medicine},
volume = {145},
pages = {105455},
year = {2022},
url = {https://doi.org/10.1016/j.compbiomed.2022.105455},
doi = {10.1016/J.COMPBIOMED.2022.105455},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cbm/MaYWZSHXZ22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cgf/XuSZX22,
author = {Shaobin Xu and
Minghui Sun and
Zhengtai Zhang and
Hao Xue},
title = {Exploring Multivariate Event Sequences with an Interactive Similarity
Builder},
journal = {Comput. Graph. Forum},
volume = {41},
number = {3},
pages = {271--282},
year = {2022},
url = {https://doi.org/10.1111/cgf.14539},
doi = {10.1111/CGF.14539},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cgf/XuSZX22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cmbbeiv/RoutUSSP22,
author = {Ranjeet Kumar Rout and
Saiyed Umer and
Sabha Sheikh and
Sanchit Sindhwani and
Smitarani Pati},
title = {EightyDVec: a method for protein sequence similarity analysis using
physicochemical properties of amino acids},
journal = {Comput. methods Biomech. Biomed. Eng. Imaging Vis.},
volume = {10},
number = {1},
pages = {3--13},
year = {2022},
url = {https://doi.org/10.1080/21681163.2021.1956369},
doi = {10.1080/21681163.2021.1956369},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/cmbbeiv/RoutUSSP22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/eswa/LiangWWC22,
author = {Mengxia Liang and
Shaocong Wu and
Xiaolong Wang and
Qingcai Chen},
title = {A stock time series forecasting approach incorporating candlestick
patterns and sequence similarity},
journal = {Expert Syst. Appl.},
volume = {205},
pages = {117595},
year = {2022},
url = {https://doi.org/10.1016/j.eswa.2022.117595},
doi = {10.1016/J.ESWA.2022.117595},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/eswa/LiangWWC22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijnc/IshikawaMHKSEK22,
author = {Hitoshi Ishikawa and
Hiroshi Mori and
Koichi Higashi and
Yoshiaki Kato and
Tomofumi Sakai and
Toshikazu Ebisuzaki and
Ken Kurokawa},
title = {{PZLAST:} an ultra-fast sequence similarity search tool implemented
on a {MIMD} processor},
journal = {Int. J. Netw. Comput.},
volume = {12},
number = {2},
pages = {446--466},
year = {2022},
url = {http://www.ijnc.org/index.php/ijnc/article/view/292},
timestamp = {Mon, 21 Nov 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ijnc/IshikawaMHKSEK22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijprai/LiYMQWL22,
author = {Wei Li and
Lina Yang and
Zuqiang Meng and
Yu Qiu and
Patrick Shen{-}Pei Wang and
Xichun Li},
title = {Phylogenetic Analysis: {A} Novel Method of Protein Sequence Similarity
Analysis},
journal = {Int. J. Pattern Recognit. Artif. Intell.},
volume = {36},
number = {10},
pages = {2258007:1--2258007:25},
year = {2022},
url = {https://doi.org/10.1142/S0218001422580071},
doi = {10.1142/S0218001422580071},
timestamp = {Tue, 18 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijprai/LiYMQWL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/VankerschaverKK22,
author = {Joris Vankerschaver and
Steven J. Kern and
Robert Kern},
title = {VPsearch: fast exact sequence similarity search for genomic sequences},
journal = {J. Open Source Softw.},
volume = {7},
number = {78},
pages = {4236},
year = {2022},
url = {https://doi.org/10.21105/joss.04236},
doi = {10.21105/JOSS.04236},
timestamp = {Sat, 25 Feb 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/VankerschaverKK22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/lgrs/LiuLLSC22,
author = {Xin Liu and
Liyuan Li and
Liqi Liu and
Xiaofeng Su and
Fansheng Chen},
title = {Moving Dim and Small Target Detection in Multiframe Infrared Sequence
With Low {SCR} Based on Temporal Profile Similarity},
journal = {{IEEE} Geosci. Remote. Sens. Lett.},
volume = {19},
pages = {1--5},
year = {2022},
url = {https://doi.org/10.1109/LGRS.2022.3168568},
doi = {10.1109/LGRS.2022.3168568},
timestamp = {Thu, 02 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/lgrs/LiuLLSC22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/pacmhci/Howell-MunsonML22,
author = {Alicia Howell{-}Munson and
Christopher Micek and
Ziheng Li and
Michael Clements and
Andrew C. Nolan and
Jackson Powell and
Erin Treacy Solovey and
Rodica Neamtu},
title = {BrainEx: Interactive Visual Exploration and Discovery of Sequence
Similarity in Brain Signals},
journal = {Proc. {ACM} Hum. Comput. Interact.},
volume = {6},
number = {{EICS}},
pages = {162:1--162:41},
year = {2022},
url = {https://doi.org/10.1145/3534516},
doi = {10.1145/3534516},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/pacmhci/Howell-MunsonML22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/sncs/BhosaleLSSV22,
author = {Hrushikesh Bhosale and
Ashwin Lahorkar and
Divye Singh and
Aamod Sane and
Jayaraman K. Valadi},
title = {Hydropathy and Conformational Similarity-Based Distributed Representation
of Protein Sequences for Properties Prediction},
journal = {{SN} Comput. Sci.},
volume = {3},
number = {1},
pages = {61},
year = {2022},
url = {https://doi.org/10.1007/s42979-021-00948-3},
doi = {10.1007/S42979-021-00948-3},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/sncs/BhosaleLSSV22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tvcg/RuddleBLMK22,
author = {Roy A. Ruddle and
J{\"{u}}rgen Bernard and
Hendrik L{\"{u}}cke{-}Tieke and
Thorsten May and
J{\"{o}}rn Kohlhammer},
title = {The Effect of Alignment on People's Ability to Judge Event Sequence
Similarity},
journal = {{IEEE} Trans. Vis. Comput. Graph.},
volume = {28},
number = {9},
pages = {3070--3081},
year = {2022},
url = {https://doi.org/10.1109/TVCG.2021.3050497},
doi = {10.1109/TVCG.2021.3050497},
timestamp = {Thu, 25 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tvcg/RuddleBLMK22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tvt/SunSWL22,
author = {Heng Sun and
Mengsi Sun and
Jian Weng and
Zhiquan Liu},
title = {Analysis of {ID} Sequences Similarity Using {DTW} in Intrusion Detection
for {CAN} Bus},
journal = {{IEEE} Trans. Veh. Technol.},
volume = {71},
number = {10},
pages = {10426--10441},
year = {2022},
url = {https://doi.org/10.1109/TVT.2022.3185111},
doi = {10.1109/TVT.2022.3185111},
timestamp = {Sun, 13 Nov 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tvt/SunSWL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/virology/LajevardiPA22,
author = {Amir Mohammadzade Lajevardi and
Saeed Parsa and
Mohammad Javad Amiri},
title = {Markhor: malware detection using fuzzy similarity of system call dependency
sequences},
journal = {J. Comput. Virol. Hacking Tech.},
volume = {18},
number = {2},
pages = {81--90},
year = {2022},
url = {https://doi.org/10.1007/s11416-021-00383-1},
doi = {10.1007/S11416-021-00383-1},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/virology/LajevardiPA22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gis/ShimizuTY22,
author = {Toru Shimizu and
Kota Tsubouchi and
Takahiro Yabe},
editor = {Matthias Renz and
Mohamed Sarwat},
title = {{GEO-BLEU:} similarity measure for geospatial sequences},
booktitle = {Proceedings of the 30th International Conference on Advances in Geographic
Information Systems, {SIGSPATIAL} 2022, Seattle, Washington, November
1-4, 2022},
pages = {17:1--17:4},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3557915.3560951},
doi = {10.1145/3557915.3560951},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/gis/ShimizuTY22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ijcnn/RachkovskijK22,
author = {Dmitri A. Rachkovskij and
Denis Kleyko},
title = {Recursive Binding for Similarity-Preserving Hypervector Representations
of Sequences},
booktitle = {International Joint Conference on Neural Networks, {IJCNN} 2022, Padua,
Italy, July 18-23, 2022},
pages = {1--8},
publisher = {{IEEE}},
year = {2022},
url = {https://doi.org/10.1109/IJCNN55064.2022.9892462},
doi = {10.1109/IJCNN55064.2022.9892462},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ijcnn/RachkovskijK22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/lrec/EnayetS22,
author = {Ayesha Enayet and
Gita Sukthankar},
editor = {Nicoletta Calzolari and
Fr{\'{e}}d{\'{e}}ric B{\'{e}}chet and
Philippe Blache and
Khalid Choukri and
Christopher Cieri and
Thierry Declerck and
Sara Goggi and
Hitoshi Isahara and
Bente Maegaard and
Joseph Mariani and
H{\'{e}}l{\`{e}}ne Mazo and
Jan Odijk and
Stelios Piperidis},
title = {An Analysis of Dialogue Act Sequence Similarity Across Multiple Domains},
booktitle = {Proceedings of the Thirteenth Language Resources and Evaluation Conference,
{LREC} 2022, Marseille, France, 20-25 June 2022},
pages = {3122--3130},
publisher = {European Language Resources Association},
year = {2022},
url = {https://aclanthology.org/2022.lrec-1.334},
timestamp = {Mon, 10 Oct 2022 16:57:52 +0200},
biburl = {https://dblp.org/rec/conf/lrec/EnayetS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2201-11691,
author = {Dmitri A. Rachkovskij and
Denis Kleyko},
title = {Recursive Binding for Similarity-Preserving Hypervector Representations
of Sequences},
journal = {CoRR},
volume = {abs/2201.11691},
year = {2022},
url = {https://arxiv.org/abs/2201.11691},
eprinttype = {arXiv},
eprint = {2201.11691},
timestamp = {Tue, 01 Feb 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2201-11691.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2211-13462,
author = {Probir Mondal},
title = {Estimation of Similarity between {DNA} Sequences and Its Graphical
Representation},
journal = {CoRR},
volume = {abs/2211.13462},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2211.13462},
doi = {10.48550/ARXIV.2211.13462},
eprinttype = {arXiv},
eprint = {2211.13462},
timestamp = {Tue, 29 Nov 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2211-13462.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@phdthesis{DBLP:phd/basesearch/Timm21,
author = {Henning Timm},
title = {Analysis and application of hash-based similarity estimation techniques
for biological sequence analysis},
school = {Dortmund University, Germany},
year = {2021},
url = {http://hdl.handle.net/2003/41188},
doi = {10.17877/DE290R-23034},
timestamp = {Fri, 12 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/phd/basesearch/Timm21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/access/NikonowiczMK21,
author = {Jakub Nikonowicz and
Lukasz Matuszewski and
Pawel Kubczak},
title = {Sequence Alignment Algorithm for Statistical Similarity Assessment},
journal = {{IEEE} Access},
volume = {9},
pages = {102153--102160},
year = {2021},
url = {https://doi.org/10.1109/ACCESS.2021.3098340},
doi = {10.1109/ACCESS.2021.3098340},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/access/NikonowiczMK21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/access/XuWJ21,
author = {Binzi Xu and
Yan Wang and
Zhicheng Ji},
title = {A Novel Operation Sequence Similarity-Based Approach for Typical Process
Route Knowledge Discovery},
journal = {{IEEE} Access},
volume = {9},
pages = {126801--126821},
year = {2021},
url = {https://doi.org/10.1109/ACCESS.2021.3105966},
doi = {10.1109/ACCESS.2021.3105966},
timestamp = {Wed, 06 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/access/XuWJ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AkonAKRR21,
author = {Mujtahid Akon and
Muntashir Akon and
Mohimenul Kabir and
Mohammad Saifur Rahman and
M. Sohel Rahman},
title = {{ADACT:} a tool for analysing (dis)similarity among nucleotide and
protein sequences using minimal and relative absent words},
journal = {Bioinform.},
volume = {37},
number = {10},
pages = {1468--1470},
year = {2021},
url = {https://doi.org/10.1093/bioinformatics/btaa853},
doi = {10.1093/BIOINFORMATICS/BTAA853},
timestamp = {Wed, 16 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AkonAKRR21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FrithNK21,
author = {Martin C. Frith and
Laurent No{\'{e}} and
Gregory Kucherov},
title = {Minimally overlapping words for sequence similarity search},
journal = {Bioinform.},
volume = {36},
number = {22-23},
pages = {5344--5350},
year = {2021},
url = {https://doi.org/10.1093/bioinformatics/btaa1054},
doi = {10.1093/BIOINFORMATICS/BTAA1054},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/FrithNK21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MoriIHKEK21,
author = {Hiroshi Mori and
Hitoshi Ishikawa and
Koichi Higashi and
Yoshiaki Kato and
Toshikazu Ebisuzaki and
Ken Kurokawa},
title = {{PZLAST:} an ultra-fast amino acid sequence similarity search server
against public metagenomes},
journal = {Bioinform.},
volume = {37},
number = {21},
pages = {3944--3946},
year = {2021},
url = {https://doi.org/10.1093/bioinformatics/btab492},
doi = {10.1093/BIOINFORMATICS/BTAB492},
timestamp = {Tue, 12 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/MoriIHKEK21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cmmm/WangXYLD21,
author = {Yaoxin Wang and
Yingjie Xu and
Zhenyu Yang and
Xiaoqing Liu and
Qi Dai},
title = {Using Recursive Feature Selection with Random Forest to Improve Protein
Structural Class Prediction for Low-Similarity Sequences},
journal = {Comput. Math. Methods Medicine},
volume = {2021},
pages = {5529389:1--5529389:9},
year = {2021},
url = {https://doi.org/10.1155/2021/5529389},
doi = {10.1155/2021/5529389},
timestamp = {Thu, 29 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cmmm/WangXYLD21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fbinf/TaoBB21,
author = {Jin Tao and
Kelly A. Brayton and
Shira L. Broschat},
title = {{PASS:} Protein Annotation Surveillance Site for Protein Annotation
Using Homologous Clusters, NLP, and Sequence Similarity Networks},
journal = {Frontiers Bioinform.},
volume = {1},
year = {2021},
url = {https://doi.org/10.3389/fbinf.2021.749008},
doi = {10.3389/FBINF.2021.749008},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/fbinf/TaoBB21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijcisys/GaoGY21,
author = {Jie Gao and
Hong Guo and
Xianguo Yan},
title = {A Manufacturing {SCOS} Model {(MSCOS)} Based on the Similarity of
Parameter Sequences Between Tasks and Service Composition},
journal = {Int. J. Comput. Intell. Syst.},
volume = {14},
number = {1},
pages = {203},
year = {2021},
url = {https://doi.org/10.1007/s44196-021-00054-5},
doi = {10.1007/S44196-021-00054-5},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijcisys/GaoGY21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijgi/XuB21,
author = {Fuyu Xu and
Kate Beard},
title = {A Unifying Framework for Analysis of Spatial-Temporal Event Sequence
Similarity and Its Applications},
journal = {{ISPRS} Int. J. Geo Inf.},
volume = {10},
number = {9},
pages = {594},
year = {2021},
url = {https://doi.org/10.3390/ijgi10090594},
doi = {10.3390/IJGI10090594},
timestamp = {Mon, 25 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijgi/XuB21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/PenevASPW21,
author = {Petar I. Penev and
Claudia Alvarez{-}Carre{\~{n}}o and
Eric Smith and
Anton S. Petrov and
Loren Dean Williams},
title = {TwinCons: Conservation score for uncovering deep sequence similarity
and divergence},
journal = {PLoS Comput. Biol.},
volume = {17},
number = {10},
year = {2021},
url = {https://doi.org/10.1371/journal.pcbi.1009541},
doi = {10.1371/JOURNAL.PCBI.1009541},
timestamp = {Tue, 16 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/PenevASPW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/MedhatS21,
author = {Belal Medhat and
Ahmed Shawish},
title = {{FLR:} {A} Revolutionary Alignment-Free Similarity Analysis Methodology
for DNA-Sequences},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {18},
number = {5},
pages = {1924--1936},
year = {2021},
url = {https://doi.org/10.1109/TCBB.2020.2967385},
doi = {10.1109/TCBB.2020.2967385},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/MedhatS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/YanWLXL21,
author = {Ke Yan and
Jie Wen and
Jin{-}Xing Liu and
Yong Xu and
Bin Liu},
title = {Protein Fold Recognition by Combining Support Vector Machines and
Pairwise Sequence Similarity Scores},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {18},
number = {5},
pages = {2008--2016},
year = {2021},
url = {https://doi.org/10.1109/TCBB.2020.2966450},
doi = {10.1109/TCBB.2020.2966450},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/YanWLXL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tjs/ZhanZLPM21,
author = {Zhuoxin Zhan and
Liulan Zhong and
Jing Lin and
Weike Pan and
Zhong Ming},
title = {Sequence-aware similarity learning for next-item recommendation},
journal = {J. Supercomput.},
volume = {77},
number = {7},
pages = {7509--7534},
year = {2021},
url = {https://doi.org/10.1007/s11227-020-03555-w},
doi = {10.1007/S11227-020-03555-W},
timestamp = {Fri, 25 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tjs/ZhanZLPM21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/wpc/BarathyD21,
author = {M. Nava Barathy and
Dejey Dharma},
title = {A Novel Protein Sequence Alignment-Based Patch Similarity Estimation
for Two-Level Data Aggregation in WMSNs},
journal = {Wirel. Pers. Commun.},
volume = {117},
number = {3},
pages = {2595--2633},
year = {2021},
url = {https://doi.org/10.1007/s11277-021-08099-7},
doi = {10.1007/S11277-021-08099-7},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/wpc/BarathyD21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/wpc/BarathyD21a,
author = {M. Nava Barathy and
Dejey Dharma},
title = {Correction to: {A} Novel Protein Sequence Alignment{\unicode{8209}}Based
Patch Similarity Estimation for Two{\unicode{8209}}Level Data Aggregation
in WMSNs},
journal = {Wirel. Pers. Commun.},
volume = {117},
number = {3},
pages = {2635},
year = {2021},
url = {https://doi.org/10.1007/s11277-021-08367-6},
doi = {10.1007/S11277-021-08367-6},
timestamp = {Wed, 07 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/wpc/BarathyD21a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe2/WuL21,
author = {Shan Wu and
Guanzheng Liu},
title = {Information-Based Similarity of Binary Symbol Sequence as a New Index
for Sleep Apnea Research},
booktitle = {{BIBE} 2021: The Fifth International Conference on Biological Information
and Biomedical Engineering, Hangzhou, China, July 20-22, 2021},
pages = {9:1--9:6},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3469678.3469687},
doi = {10.1145/3469678.3469687},
timestamp = {Wed, 04 Aug 2021 15:24:04 +0200},
biburl = {https://dblp.org/rec/conf/bibe2/WuL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/IslamAAZDA21,
author = {Saminur Islam and
Ahmed Abbasi and
Nitin Agarwal and
Wanhong Zheng and
Gianfranco Doretto and
Donald A. Adjeroh},
editor = {Yufei Huang and
Lukasz A. Kurgan and
Feng Luo and
Xiaohua Hu and
Yidong Chen and
Edward R. Dougherty and
Andrzej Kloczkowski and
Yaohang Li},
title = {Detecting Drug-Drug Interactions using Protein Sequence-Structure
Similarity Networks},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2021, Houston, TX, USA, December 9-12, 2021},
pages = {3472--3477},
publisher = {{IEEE}},
year = {2021},
url = {https://doi.org/10.1109/BIBM52615.2021.9669858},
doi = {10.1109/BIBM52615.2021.9669858},
timestamp = {Tue, 18 Jan 2022 09:39:01 +0100},
biburl = {https://dblp.org/rec/conf/bibm/IslamAAZDA21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ic-nc/IshikawaMHKSEK21,
author = {Hitoshi Ishikawa and
Hiroshi Mori and
Koichi Higashi and
Yoshiaki Kato and
Tomofumi Sakai and
Toshikazu Ebisuzaki and
Ken Kurokawa},
title = {{PZLAST:} an ultra-fast sequence similarity search tool implemented
on a {MIMD} processor},
booktitle = {Ninth International Symposium on Computing and Networking, {CANDAR}
2021, Matsue, Japan, November 23-26, 2021},
pages = {102--107},
publisher = {{IEEE}},
year = {2021},
url = {https://doi.org/10.1109/CANDAR53791.2021.00021},
doi = {10.1109/CANDAR53791.2021.00021},
timestamp = {Sat, 08 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ic-nc/IshikawaMHKSEK21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icdar/UngNNN21,
author = {Quang Huy Ung and
Cuong Tuan Nguyen and
Hung Tuan Nguyen and
Masaki Nakagawa},
editor = {Josep Llad{\'{o}}s and
Daniel Lopresti and
Seiichi Uchida},
title = {{GSSF:} {A} Generative Sequence Similarity Function Based on a Seq2Seq
Model for Clustering Online Handwritten Mathematical Answers},
booktitle = {16th International Conference on Document Analysis and Recognition,
{ICDAR} 2021, Lausanne, Switzerland, September 5-10, 2021, Proceedings,
Part {II}},
series = {Lecture Notes in Computer Science},
volume = {12822},
pages = {145--159},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-86331-9\_10},
doi = {10.1007/978-3-030-86331-9\_10},
timestamp = {Thu, 09 Sep 2021 13:50:34 +0200},
biburl = {https://dblp.org/rec/conf/icdar/UngNNN21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iciscae/QiaoPWZZ21,
author = {Mu Qiao and
Jingwen Peng and
Zhenhui Wang and
Yang Zhou and
Jeffrey Zheng},
title = {Sequence Similarity Analysis between SARS-CoV-2 and Other Viruses
Based on Variant Logic Framework and Topological Entropy},
booktitle = {{ICISCAE} 2021: 4th International Conference on Information Systems
and Computer Aided Education, Dalian, China, September 24 - 26, 2021},
pages = {2563--2567},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3482632.3487471},
doi = {10.1145/3482632.3487471},
timestamp = {Thu, 02 Dec 2021 14:37:44 +0100},
biburl = {https://dblp.org/rec/conf/iciscae/QiaoPWZZ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icit2/Reguera-Bakhache21,
author = {Daniel Reguera{-}Bakhache and
I{\~{n}}aki Garitano and
Roberto Uribeetxeberria and
Carlos Cernuda},
title = {An Industrial {HMI} Temporal Adaptation based on Operator-Machine
Interaction Sequence Similarity},
booktitle = {22nd {IEEE} International Conference on Industrial Technology, {ICIT}
2021, Valencia, Spain, March 10-12, 2021},
pages = {1021--1026},
publisher = {{IEEE}},
year = {2021},
url = {https://doi.org/10.1109/ICIT46573.2021.9453580},
doi = {10.1109/ICIT46573.2021.9453580},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icit2/Reguera-Bakhache21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iseeie/LiuL21,
author = {Xiaoyu Liu and
Shuqing Li},
title = {Collaborative Filtering Recommendation Algorithm Based on Similarity
of Co-Rating Sequence},
booktitle = {{ISEEIE} 2021: International Symposium on Electrical, Electronics
and Information Engineering, Seoul Republic of Korea, February 19
- 21, 2021},
pages = {458--463},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459104.3459180},
doi = {10.1145/3459104.3459180},
timestamp = {Thu, 12 Aug 2021 13:49:47 +0200},
biburl = {https://dblp.org/rec/conf/iseeie/LiuL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/mod/BonniciCF21,
author = {Vincenzo Bonnici and
Andrea Cracco and
Giuditta Franco},
editor = {Giuseppe Nicosia and
Varun Ojha and
Emanuele La Malfa and
Gabriele La Malfa and
Giorgio Jansen and
Panos M. Pardalos and
Giovanni Giuffrida and
Renato Umeton},
title = {A k-mer Based Sequence Similarity for Pangenomic Analyses},
booktitle = {Machine Learning, Optimization, and Data Science - 7th International
Conference, {LOD} 2021, Grasmere, UK, October 4-8, 2021, Revised Selected
Papers, Part {II}},
series = {Lecture Notes in Computer Science},
volume = {13164},
pages = {31--44},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-95470-3\_3},
doi = {10.1007/978-3-030-95470-3\_3},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/mod/BonniciCF21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pkdd/BarbosaRD21,
author = {Alberto Barbosa and
Pedro Ribeiro and
In{\^{e}}s Dutra},
editor = {Ulf Brefeld and
Jesse Davis and
Jan Van Haaren and
Albrecht Zimmermann},
title = {Similarity of Football Players Using Passing Sequences},
booktitle = {Machine Learning and Data Mining for Sports Analytics - 8th International
Workshop, {MLSA} 2021, Virtual Event, September 13, 2021, Revised
Selected Papers},
series = {Communications in Computer and Information Science},
volume = {1571},
pages = {51--61},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-031-02044-5\_5},
doi = {10.1007/978-3-031-02044-5\_5},
timestamp = {Wed, 22 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/pkdd/BarbosaRD21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pst/JinZX21,
author = {Jiacheng Jin and
Yandong Zheng and
Pulei Xiong},
title = {EPSim-GS: Efficient and Privacy-Preserving Similarity Range Query
over Genomic Sequences},
booktitle = {18th International Conference on Privacy, Security and Trust, {PST}
2021, Auckland, New Zealand, December 13-15, 2021},
pages = {1--10},
publisher = {{IEEE}},
year = {2021},
url = {https://doi.org/10.1109/PST52912.2021.9647830},
doi = {10.1109/PST52912.2021.9647830},
timestamp = {Tue, 28 Dec 2021 14:39:32 +0100},
biburl = {https://dblp.org/rec/conf/pst/JinZX21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2104-03763,
author = {Mubark Jedh and
Lotfi Ben Othmane and
Noor Ahmed and
Bharat K. Bhargava},
title = {Detection of Message Injection Attacks onto the {CAN} Bus using Similarity
of Successive Messages-Sequence Graphs},
journal = {CoRR},
volume = {abs/2104.03763},
year = {2021},
url = {https://arxiv.org/abs/2104.03763},
eprinttype = {arXiv},
eprint = {2104.03763},
timestamp = {Mon, 18 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2104-03763.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2105-10159,
author = {Quang Huy Ung and
Cuong Tuan Nguyen and
Hung Tuan Nguyen and
Masaki Nakagawa},
title = {{GSSF:} {A} Generative Sequence Similarity Function based on a Seq2Seq
model for clustering online handwritten mathematical answers},
journal = {CoRR},
volume = {abs/2105.10159},
year = {2021},
url = {https://arxiv.org/abs/2105.10159},
eprinttype = {arXiv},
eprint = {2105.10159},
timestamp = {Mon, 31 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2105-10159.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2112-07144,
author = {Toru Shimizu and
Kota Tsubouchi and
Takahiro Yabe},
title = {{GEO-BLEU:} Similarity Measure for Geospatial Sequences},
journal = {CoRR},
volume = {abs/2112.07144},
year = {2021},
url = {https://arxiv.org/abs/2112.07144},
eprinttype = {arXiv},
eprint = {2112.07144},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2112-07144.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2112-09755,
author = {St{\'{e}}phane Samson and
Etienne Lord and
Vladimir Makarenkov},
title = {SimPlot++: a Python application for representing sequence similarity
and detecting recombination},
journal = {CoRR},
volume = {abs/2112.09755},
year = {2021},
url = {https://arxiv.org/abs/2112.09755},
eprinttype = {arXiv},
eprint = {2112.09755},
timestamp = {Wed, 05 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2112-09755.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2112-15475,
author = {Dmitri A. Rachkovskij},
title = {Shift-Equivariant Similarity-Preserving Hypervector Representations
of Sequences},
journal = {CoRR},
volume = {abs/2112.15475},
year = {2021},
url = {https://arxiv.org/abs/2112.15475},
eprinttype = {arXiv},
eprint = {2112.15475},
timestamp = {Wed, 05 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2112-15475.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/asc/Rico-JuanVI20,
author = {Juan Ram{\'{o}}n Rico{-}Juan and
Jose J. Valero{-}Mas and
Jos{\'{e}} M. I{\~{n}}esta},
title = {Bounding Edit Distance for similarity-based sequence classification
on Structural Pattern Recognition},
journal = {Appl. Soft Comput.},
volume = {97},
number = {Part},
pages = {106778},
year = {2020},
url = {https://doi.org/10.1016/j.asoc.2020.106778},
doi = {10.1016/J.ASOC.2020.106778},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/asc/Rico-JuanVI20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LiuLY20,
author = {Bin Liu and
Chen{-}Chen Li and
Ke Yan},
title = {DeepSVM-fold: protein fold recognition by combining support vector
machines and pairwise sequence similarity scores generated by deep
learning networks},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1733--1741},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz098},
doi = {10.1093/BIB/BBZ098},
timestamp = {Mon, 13 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/LiuLY20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KistPSSVBM20,
author = {Nicolaas C. Kist and
Robert A. Power and
Andrew Skelton and
Seth D. Seegobin and
Moira Verbelen and
Bushan Bonde and
Karim Malki},
title = {RNASeq{\_}similarity{\_}matrix: visually identify sample mix-ups in
RNASeq data using a 'genomic' sequence similarity matrix},
journal = {Bioinform.},
volume = {36},
number = {6},
pages = {1940--1941},
year = {2020},
url = {https://doi.org/10.1093/bioinformatics/btz821},
doi = {10.1093/BIOINFORMATICS/BTZ821},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/KistPSSVBM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XingKM20,
author = {Henry Xing and
Steven W. Kembel and
Vladimir Makarenkov},
title = {Transfer index, NetUniFrac and some useful shortest path-based distances
for community analysis in sequence similarity networks},
journal = {Bioinform.},
volume = {36},
number = {9},
pages = {2740--2749},
year = {2020},
url = {https://doi.org/10.1093/bioinformatics/btaa043},
doi = {10.1093/BIOINFORMATICS/BTAA043},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/XingKM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CampoK20,
author = {David S. Campo and
Yury Khudyakov},
title = {Convex hulls in hamming space enable efficient search for similarity
and clustering of genomic sequences},
journal = {{BMC} Bioinform.},
volume = {21-S},
number = {18},
pages = {482},
year = {2020},
url = {https://doi.org/10.1186/s12859-020-03811-z},
doi = {10.1186/S12859-020-03811-Z},
timestamp = {Sat, 09 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CampoK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cominfsys/WenZW20,
author = {Jia Wen and
Yuyan Zhang and
Huanxu Wang},
title = {Similarity analysis of protein sequences using a reduced {\textdollar}k{\textdollar}-mer
amino acid model},
journal = {Commun. Inf. Syst.},
volume = {20},
number = {1},
pages = {45--60},
year = {2020},
url = {https://doi.org/10.4310/cis.2020.v20.n1.a3},
doi = {10.4310/CIS.2020.V20.N1.A3},
timestamp = {Fri, 16 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cominfsys/WenZW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijmtm/Shunmugasundaram20,
author = {M. Shunmugasundaram and
V. Anbumalar},
title = {Cellular layout formation by using weighted similarity-based modified
flow matrix with process sequence data},
journal = {Int. J. Manuf. Technol. Manag.},
volume = {34},
number = {1},
pages = {61--77},
year = {2020},
url = {https://doi.org/10.1504/IJMTM.2020.105817},
doi = {10.1504/IJMTM.2020.105817},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijmtm/Shunmugasundaram20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ipm/SanchezB20,
author = {Pablo S{\'{a}}nchez and
Alejandro Bellog{\'{\i}}n},
title = {Time and sequence awareness in similarity metrics for recommendation},
journal = {Inf. Process. Manag.},
volume = {57},
number = {3},
pages = {102228},
year = {2020},
url = {https://doi.org/10.1016/j.ipm.2020.102228},
doi = {10.1016/J.IPM.2020.102228},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ipm/SanchezB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isci/Perez-ChaconAML20,
author = {Rub{\'{e}}n P{\'{e}}rez{-}Chac{\'{o}}n and
Gualberto Asencio{-}Cort{\'{e}}s and
Francisco Mart{\'{\i}}nez{-}{\'{A}}lvarez and
Alicia Troncoso Lora},
title = {Big data time series forecasting based on pattern sequence similarity
and its application to the electricity demand},
journal = {Inf. Sci.},
volume = {540},
pages = {160--174},
year = {2020},
url = {https://doi.org/10.1016/j.ins.2020.06.014},
doi = {10.1016/J.INS.2020.06.014},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/isci/Perez-ChaconAML20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jocec/QianL20,
author = {Xiaodong Qian and
Min Li},
title = {E-Commerce User Type Recognition Based on Access Sequence Similarity},
journal = {J. Organ. Comput. Electron. Commer.},
volume = {30},
number = {3},
pages = {209--223},
year = {2020},
url = {https://doi.org/10.1080/10919392.2020.1742552},
doi = {10.1080/10919392.2020.1742552},
timestamp = {Mon, 17 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jocec/QianL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nn/OregiSPL20,
author = {Izaskun Oregi and
Javier Del Ser and
Aritz P{\'{e}}rez and
Jos{\'{e}} Antonio Lozano},
title = {Robust image classification against adversarial attacks using elastic
similarity measures between edge count sequences},
journal = {Neural Networks},
volume = {128},
pages = {61--72},
year = {2020},
url = {https://doi.org/10.1016/j.neunet.2020.04.030},
doi = {10.1016/J.NEUNET.2020.04.030},
timestamp = {Fri, 23 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nn/OregiSPL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/patterns/BaharavKTS20,
author = {Tavor Z. Baharav and
Govinda M. Kamath and
David N. C. Tse and
Ilan Shomorony},
title = {Spectral Jaccard Similarity: {A} New Approach to Estimating Pairwise
Sequence Alignments},
journal = {Patterns},
volume = {1},
number = {6},
pages = {100081},
year = {2020},
url = {https://doi.org/10.1016/j.patter.2020.100081},
doi = {10.1016/J.PATTER.2020.100081},
timestamp = {Thu, 16 Sep 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/patterns/BaharavKTS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/symmetry/LuZLD20,
author = {Yue Lu and
Long Zhao and
Zhao Li and
Xiangjun Dong},
title = {Genetic Similarity Analysis Based on Positive and Negative Sequence
Patterns of {DNA}},
journal = {Symmetry},
volume = {12},
number = {12},
pages = {2090},
year = {2020},
url = {https://doi.org/10.3390/sym12122090},
doi = {10.3390/SYM12122090},
timestamp = {Sat, 09 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/symmetry/LuZLD20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/NormanRCD20,
author = {Norman "John" Mapes and
Christopher Rodriguez and
Pradeep Chowriappa and
Sumeet Dua},
title = {Local Similarity Matrix for Cysteine Disulfide Connectivity Prediction
from Protein Sequences},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {17},
number = {4},
pages = {1276--1289},
year = {2020},
url = {https://doi.org/10.1109/TCBB.2019.2892441},
doi = {10.1109/TCBB.2019.2892441},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/NormanRCD20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ai/MirbagheriH20,
author = {S. Mohammad Mirbagheri and
Howard J. Hamilton},
editor = {Cyril Goutte and
Xiaodan Zhu},
title = {Similarity Matching of Temporal Event-Interval Sequences},
booktitle = {Advances in Artificial Intelligence - 33rd Canadian Conference on
Artificial Intelligence, Canadian {AI} 2020, Ottawa, ON, Canada, May
13-15, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12109},
pages = {420--425},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-47358-7\_43},
doi = {10.1007/978-3-030-47358-7\_43},
timestamp = {Mon, 18 Dec 2023 11:22:01 +0100},
biburl = {https://dblp.org/rec/conf/ai/MirbagheriH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/0001AJL20,
author = {Yue Jiang and
Donald A. Adjeroh and
Bing{-}Hua Jiang and
Jie Lin},
editor = {Taesung Park and
Young{-}Rae Cho and
Xiaohua Hu and
Illhoi Yoo and
Hyun Goo Woo and
Jianxin Wang and
Julio C. Facelli and
Seungyoon Nam and
Mingon Kang},
title = {J2\({}^{\mbox{*}}\): {A} New Method for Alignment-free Sequence Similarity
Measurement},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2020, Virtual Event, South Korea, December 16-19, 2020},
pages = {2209--2214},
publisher = {{IEEE}},
year = {2020},
url = {https://doi.org/10.1109/BIBM49941.2020.9313338},
doi = {10.1109/BIBM49941.2020.9313338},
timestamp = {Fri, 09 Apr 2021 17:11:13 +0200},
biburl = {https://dblp.org/rec/conf/bibm/0001AJL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bigcomp/ZhongLP020,
author = {Liulan Zhong and
Jing Lin and
Weike Pan and
Zhong Ming},
editor = {Wookey Lee and
Luonan Chen and
Yang{-}Sae Moon and
Julien Bourgeois and
Mehdi Bennis and
Yu{-}Feng Li and
Young{-}Guk Ha and
Hyuk{-}Yoon Kwon and
Alfredo Cuzzocrea},
title = {Sequence-Aware Factored Mixed Similarity Model for Next-Item Recommendation},
booktitle = {2020 {IEEE} International Conference on Big Data and Smart Computing,
BigComp 2020, Busan, Korea (South), February 19-22, 2020},
pages = {181--188},
publisher = {{IEEE}},
year = {2020},
url = {https://doi.org/10.1109/BigComp48618.2020.00-78},
doi = {10.1109/BIGCOMP48618.2020.00-78},
timestamp = {Thu, 25 Mar 2021 15:26:20 +0100},
biburl = {https://dblp.org/rec/conf/bigcomp/ZhongLP020.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/edm/MbouzaoDS20,
author = {Boniface Mbouzao and
Michel C. Desmarais and
Ian Shrier},
editor = {Anna N. Rafferty and
Jacob Whitehill and
Crist{\'{o}}bal Romero and
Violetta Cavalli{-}Sforza},
title = {Methodology to measure of similarity in student video sequence of
interactions},
booktitle = {Proceedings of the 13th International Conference on Educational Data
Mining, {EDM} 2020, Fully virtual conference, July 10-13, 2020},
publisher = {International Educational Data Mining Society},
year = {2020},
url = {https://educationaldatamining.org/files/conferences/EDM2020/papers/paper\_3.pdf},
timestamp = {Tue, 23 Aug 2022 09:19:48 +0200},
biburl = {https://dblp.org/rec/conf/edm/MbouzaoDS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ica3pp/YangHP20,
author = {Guang Yang and
Xiaoguang Hong and
Zhaohui Peng},
editor = {Meikang Qiu},
title = {Recommendation with Temporal Dynamics Based on Sequence Similarity
Search},
booktitle = {Algorithms and Architectures for Parallel Processing - 20th International
Conference, {ICA3PP} 2020, New York City, NY, USA, October 2-4, 2020,
Proceedings, Part {II}},
series = {Lecture Notes in Computer Science},
volume = {12453},
pages = {690--704},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-60239-0\_47},
doi = {10.1007/978-3-030-60239-0\_47},
timestamp = {Tue, 06 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ica3pp/YangHP20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icann/LinKRT20,
author = {Yang Lin and
Irena Koprinska and
Mashud Rana and
Alicia Troncoso},
editor = {Igor Farkas and
Paolo Masulli and
Stefan Wermter},
title = {Solar Power Forecasting Based on Pattern Sequence Similarity and Meta-learning},
booktitle = {Artificial Neural Networks and Machine Learning - {ICANN} 2020 - 29th
International Conference on Artificial Neural Networks, Bratislava,
Slovakia, September 15-18, 2020, Proceedings, Part {I}},
series = {Lecture Notes in Computer Science},
volume = {12396},
pages = {271--283},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-61609-0\_22},
doi = {10.1007/978-3-030-61609-0\_22},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icann/LinKRT20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icassp/JiangYC20,
author = {Chaoya Jiang and
Deshun Yang and
Xiaoou Chen},
title = {Similarity Learning For Cover Song Identification Using Cross-Similarity
Matrices of Multi-Level Deep Sequences},
booktitle = {2020 {IEEE} International Conference on Acoustics, Speech and Signal
Processing, {ICASSP} 2020, Barcelona, Spain, May 4-8, 2020},
pages = {26--30},
publisher = {{IEEE}},
year = {2020},
url = {https://doi.org/10.1109/ICASSP40776.2020.9053257},
doi = {10.1109/ICASSP40776.2020.9053257},
timestamp = {Thu, 23 Jul 2020 16:19:28 +0200},
biburl = {https://dblp.org/rec/conf/icassp/JiangYC20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/jcdl/AnLXCP20,
author = {Xin An and
Jinghong Li and
Shuo Xu and
Liang Chen and
Sainan Pi},
editor = {Chengzhi Zhang and
Philipp Mayr and
Wei Lu and
Yi Zhang},
title = {A Novel Approach for Patent Similarity Measurement Based on Sequence
Alignment},
booktitle = {Proceedings of the 1st Workshop on Extraction and Evaluation of Knowledge
Entities from Scientific Documents co-located with the {ACM/IEEE}
Joint Conference on Digital Libraries in 2020, EEKE@JCDL 2020, Virtual
Event, China, August 1st, 2020},
series = {{CEUR} Workshop Proceedings},
volume = {2658},
pages = {45--49},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2658/paper5.pdf},
timestamp = {Wed, 16 Aug 2023 07:53:32 +0200},
biburl = {https://dblp.org/rec/conf/jcdl/AnLXCP20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/BaharavKTS20,
author = {Tavor Z. Baharav and
Govinda M. Kamath and
David N. C. Tse and
Ilan Shomorony},
editor = {Russell Schwartz},
title = {Spectral Jaccard Similarity: {A} New Approach to Estimating Pairwise
Sequence Alignments},
booktitle = {Research in Computational Molecular Biology - 24th Annual International
Conference, {RECOMB} 2020, Padua, Italy, May 10-13, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12074},
pages = {223--225},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-45257-5\_15},
doi = {10.1007/978-3-030-45257-5\_15},
timestamp = {Tue, 21 Apr 2020 12:14:30 +0200},
biburl = {https://dblp.org/rec/conf/recomb/BaharavKTS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@phdthesis{DBLP:phd/hal/Linardi19,
author = {Michele Linardi},
title = {Variable-length similarity search for very large data series: subsequence
matching, motif and discord detection. (Recherche de similarit{\'{e}}
de longueur variable pour l'analyse de grandes s{\'{e}}ries temporelles:
appariement de s{\'{e}}quences, recherche de motifs et anomalies)},
school = {Sorbonne Paris Cit{\'{e}}, France},
year = {2019},
url = {https://tel.archives-ouvertes.fr/tel-04047032},
timestamp = {Thu, 27 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/phd/hal/Linardi19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/access/LiLWL19a,
author = {Hailin Li and
Chunpei Lin and
Xiaoji Wan and
Zhengxin Li},
title = {Feature Representation and Similarity Measure Based on Covariance
Sequence for Multivariate Time Series},
journal = {{IEEE} Access},
volume = {7},
pages = {67018--67026},
year = {2019},
url = {https://doi.org/10.1109/ACCESS.2019.2915602},
doi = {10.1109/ACCESS.2019.2915602},
timestamp = {Fri, 05 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/access/LiLWL19a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YunesB19,
author = {Jeffrey M. Yunes and
Patricia C. Babbitt},
title = {Effusion: prediction of protein function from sequence similarity
networks},
journal = {Bioinform.},
volume = {35},
number = {3},
pages = {442--451},
year = {2019},
url = {https://doi.org/10.1093/bioinformatics/bty672},
doi = {10.1093/BIOINFORMATICS/BTY672},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/YunesB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ThakkarB19,
author = {Neerja Thakkar and
Chris Bailey{-}Kellogg},
title = {Balancing sensitivity and specificity in distinguishing {TCR} groups
by {CDR} sequence similarity},
journal = {{BMC} Bioinform.},
volume = {20},
number = {1},
pages = {241:1--241:14},
year = {2019},
url = {https://doi.org/10.1186/s12859-019-2864-8},
doi = {10.1186/S12859-019-2864-8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ThakkarB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/datamine/RysavyZ19,
author = {Petr Rysav{\'{y}} and
Filip Zelezn{\'{y}}},
title = {Estimating sequence similarity from read sets for clustering next-generation
sequencing data},
journal = {Data Min. Knowl. Discov.},
volume = {33},
number = {1},
pages = {1--23},
year = {2019},
url = {https://doi.org/10.1007/s10618-018-0584-8},
doi = {10.1007/S10618-018-0584-8},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/datamine/RysavyZ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dss/FredricksonMAK19,
author = {Joel Fredrickson and
Michael Mannino and
Omar Alqahtani and
Farnoush Banaei Kashani},
title = {Using similarity measures for medical event sequences to predict mortality
in trauma patients},
journal = {Decis. Support Syst.},
volume = {116},
pages = {35--47},
year = {2019},
url = {https://doi.org/10.1016/j.dss.2018.10.008},
doi = {10.1016/J.DSS.2018.10.008},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/dss/FredricksonMAK19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fini/WatanabeHTEF19,
author = {Keita Watanabe and
Tatsuya Haga and
Masami Tatsuno and
David R. Euston and
Tomoki Fukai},
title = {Unsupervised Detection of Cell-Assembly Sequences by Similarity-Based
Clustering},
journal = {Frontiers Neuroinformatics},
volume = {13},
pages = {39},
year = {2019},
url = {https://doi.org/10.3389/fninf.2019.00039},
doi = {10.3389/FNINF.2019.00039},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/fini/WatanabeHTEF19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijgi/WangWZL19,
author = {Peixiao Wang and
Sheng Wu and
Hengcai Zhang and
Feng Lu},
title = {Indoor Location Prediction Method for Shopping Malls Based on Location
Sequence Similarity},
journal = {{ISPRS} Int. J. Geo Inf.},
volume = {8},
number = {11},
pages = {517},
year = {2019},
url = {https://doi.org/10.3390/ijgi8110517},
doi = {10.3390/IJGI8110517},
timestamp = {Tue, 25 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijgi/WangWZL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijitm/LiL19,
author = {Haibo Li and
Mengxia Liang},
title = {Identifying inter-organisational resource-service sequences based
on similarity for collaborative tasks},
journal = {Int. J. Inf. Technol. Manag.},
volume = {18},
number = {2/3},
pages = {156--170},
year = {2019},
url = {https://doi.org/10.1504/IJITM.2019.099815},
doi = {10.1504/IJITM.2019.099815},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ijitm/LiL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijstm/LiSL19,
author = {Haibo Li and
Yingchuan Sun and
Tangquan Lin},
title = {Mining resource service sequences based on similarity for collaborative
tasks},
journal = {Int. J. Serv. Technol. Manag.},
volume = {25},
number = {5/6},
pages = {460--473},
year = {2019},
url = {https://doi.org/10.1504/IJSTM.2019.101899},
doi = {10.1504/IJSTM.2019.101899},
timestamp = {Thu, 30 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijstm/LiSL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/kbs/ZhuFLCH19,
author = {Xiao{-}Juan Zhu and
Chao{-}Qin Feng and
Hong{-}Yan Lai and
Wei Chen and
Hao Lin},
title = {Predicting protein structural classes for low-similarity sequences
by evaluating different features},
journal = {Knowl. Based Syst.},
volume = {163},
pages = {787--793},
year = {2019},
url = {https://doi.org/10.1016/j.knosys.2018.10.007},
doi = {10.1016/J.KNOSYS.2018.10.007},
timestamp = {Tue, 07 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/kbs/ZhuFLCH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/SenterRSS19,
author = {James K. Senter and
Taylor M. Royalty and
Andrew D. Steen and
Amir Sadovnik},
editor = {Illhoi Yoo and
Jinbo Bi and
Xiaohua Hu},
title = {Unaligned Sequence Similarity Search Using Deep Learning},
booktitle = {2019 {IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2019, San Diego, CA, USA, November 18-21, 2019},
pages = {1892--1899},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/BIBM47256.2019.8983072},
doi = {10.1109/BIBM47256.2019.8983072},
timestamp = {Fri, 09 Apr 2021 17:11:15 +0200},
biburl = {https://dblp.org/rec/conf/bibm/SenterRSS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bics/LiuYRM19,
author = {Yuren Liu and
Yijun Yan and
Jinchang Ren and
Stephen Marshall},
editor = {Jinchang Ren and
Amir Hussain and
Huimin Zhao and
Kaizhu Huang and
Jiangbin Zheng and
Jun Cai and
Rongjun Chen and
Yinyin Xiao},
title = {Sequence Similarity Alignment Algorithm in Bioinformatics: Techniques
and Challenges},
booktitle = {Advances in Brain Inspired Cognitive Systems - 10th International
Conference, {BICS} 2019, Guangzhou, China, July 13-14, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11691},
pages = {550--560},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-39431-8\_53},
doi = {10.1007/978-3-030-39431-8\_53},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bics/LiuYRM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/codit/AlalyanZAB19,
author = {Fahdah Alalyan and
Nuha Zamzami and
Manar Amayri and
Nizar Bouguila},
title = {An Improved K-medoids Algorithm Based on Binary Sequences Similarity
Measures},
booktitle = {6th International Conference on Control, Decision and Information
Technologies, CoDIT 2019, Paris, France, April 23-26, 2019},
pages = {1723--1728},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/CoDIT.2019.8820298},
doi = {10.1109/CODIT.2019.8820298},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/codit/AlalyanZAB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iconip/ChangLLLS0019,
author = {Yongzhe Chang and
Zhidong Li and
Ling Luo and
Simon Luo and
Arcot Sowmya and
Yang Wang and
Fang Chen},
editor = {Tom Gedeon and
Kok Wai Wong and
Minho Lee},
title = {Exploring Latent Structure Similarity for Bayesian Nonparameteric
Model with Mixture of {NHPP} Sequence},
booktitle = {Neural Information Processing - 26th International Conference, {ICONIP}
2019, Sydney, NSW, Australia, December 12-15, 2019, Proceedings, Part
{II}},
series = {Lecture Notes in Computer Science},
volume = {11954},
pages = {432--444},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-36711-4\_36},
doi = {10.1007/978-3-030-36711-4\_36},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/iconip/ChangLLLS0019.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ictc/LeeJKK19,
author = {Shinho Lee and
Wookhyun Jung and
Sangwon Kim and
Eui Tak Kim},
title = {Android Malware Similarity Clustering using Method based Opcode Sequence
and Jaccard Index},
booktitle = {2019 International Conference on Information and Communication Technology
Convergence, {ICTC} 2019, Jeju Island, Korea (South), October 16-18,
2019},
pages = {178--183},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/ICTC46691.2019.8939894},
doi = {10.1109/ICTC46691.2019.8939894},
timestamp = {Fri, 13 Mar 2020 12:33:49 +0100},
biburl = {https://dblp.org/rec/conf/ictc/LeeJKK19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isit/CayreB19,
author = {Fran{\c{c}}ois Cayre and
Nicolas Le Bihan},
title = {Complexity and Similarity for Sequences using LZ77-based conditional
information measure},
booktitle = {{IEEE} International Symposium on Information Theory, {ISIT} 2019,
Paris, France, July 7-12, 2019},
pages = {2454--2458},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/ISIT.2019.8849610},
doi = {10.1109/ISIT.2019.8849610},
timestamp = {Wed, 16 Oct 2019 14:14:48 +0200},
biburl = {https://dblp.org/rec/conf/isit/CayreB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/jcsse/TriandiniFSR19,
author = {Evi Triandini and
Reza Fauzan and
Daniel Oranova Siahaan and
Siti Rochimah},
title = {Sequence Diagram Similarity Measurement: {A} Different Approach},
booktitle = {16th International Joint Conference on Computer Science and Software
Engineering, {JCSSE} 2019, Chonburi, Thailand, July 10-12, 2019},
pages = {348--351},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/JCSSE.2019.8864207},
doi = {10.1109/JCSSE.2019.8864207},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/jcsse/TriandiniFSR19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1907-09275,
author = {Kai Brehmer and
Benjamin Wacker and
Jan Modersitzki},
title = {Simultaneous Registration of Image Sequences - a novel singular value
based images similarity measure},
journal = {CoRR},
volume = {abs/1907.09275},
year = {2019},
url = {http://arxiv.org/abs/1907.09275},
eprinttype = {arXiv},
eprint = {1907.09275},
timestamp = {Tue, 30 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1907-09275.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1907-09741,
author = {Kai Brehmer and
Benjamin Wacker and
Jan Modersitzki},
title = {A Novel Similarity Measure for Image Sequences},
journal = {CoRR},
volume = {abs/1907.09741},
year = {2019},
url = {http://arxiv.org/abs/1907.09741},
eprinttype = {arXiv},
eprint = {1907.09741},
timestamp = {Tue, 30 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1907-09741.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1909-06929,
author = {James K. Senter and
Taylor M. Royalty and
Andrew D. Steen and
Amir Sadovnik},
title = {Unaligned Sequence Similarity Search Using Deep Learning},
journal = {CoRR},
volume = {abs/1909.06929},
year = {2019},
url = {http://arxiv.org/abs/1909.06929},
eprinttype = {arXiv},
eprint = {1909.06929},
timestamp = {Mon, 23 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1909-06929.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@phdthesis{DBLP:phd/basesearch/Yunes18,
author = {Jeffrey Michael Yunes},
title = {Prediction of Protein Function with a Probabilistic Model for Analysis
of Sequence Similarity Networks and Genomic Context},
school = {University of California, San Francisco, {USA}},
year = {2018},
url = {http://www.escholarship.org/uc/item/2rr61756},
timestamp = {Fri, 21 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/phd/basesearch/Yunes18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/access/PanettaBA18,
author = {Karen Panetta and
Long Bao and
Sos S. Agaian},
title = {A New Unified Impulse Noise Removal Algorithm Using a New Reference
Sequence-to-Sequence Similarity Detector},
journal = {{IEEE} Access},
volume = {6},
pages = {37225--37236},
year = {2018},
url = {https://doi.org/10.1109/ACCESS.2018.2850518},
doi = {10.1109/ACCESS.2018.2850518},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/access/PanettaBA18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LinAJJ18,
author = {Jie Lin and
Donald A. Adjeroh and
Bing{-}Hua Jiang and
Yue Jiang},
title = {{K2} and {K} 2 * : efficient alignment-free sequence similarity measurement
based on Kendall statistics},
journal = {Bioinform.},
volume = {34},
number = {10},
pages = {1682--1689},
year = {2018},
url = {https://doi.org/10.1093/bioinformatics/btx809},
doi = {10.1093/BIOINFORMATICS/BTX809},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LinAJJ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TakedaH18,
author = {Taikai Takeda and
Michiaki Hamada},
title = {Beyond similarity assessment: selecting the optimal model for sequence
alignment via the Factorized Asymptotic Bayesian algorithm},
journal = {Bioinform.},
volume = {34},
number = {4},
pages = {576--584},
year = {2018},
url = {https://doi.org/10.1093/bioinformatics/btx643},
doi = {10.1093/BIOINFORMATICS/BTX643},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TakedaH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LinWAJJ18,
author = {Jie Lin and
Jing Wei and
Donald A. Adjeroh and
Bing{-}Hua Jiang and
Yue Jiang},
title = {{SSAW:} {A} new sequence similarity analysis method based on the stationary
discrete wavelet transform},
journal = {{BMC} Bioinform.},
volume = {19},
number = {1},
pages = {165:1--165:11},
year = {2018},
url = {https://doi.org/10.1186/s12859-018-2155-9},
doi = {10.1186/S12859-018-2155-9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LinWAJJ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cominfsys/ZhangW18,
author = {Yuyan Zhang and
Jia Wen},
title = {Similarity analysis of protein sequences based on a new graphical
representation method},
journal = {Commun. Inf. Syst.},
volume = {18},
number = {3},
pages = {193--208},
year = {2018},
url = {https://doi.org/10.4310/cis.2018.v18.n3.a4},
doi = {10.4310/CIS.2018.V18.N3.A4},
timestamp = {Tue, 15 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cominfsys/ZhangW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejivp/Chan18,
author = {Kwok{-}Leung Chan},
title = {Segmentation of moving objects in image sequence based on perceptual
similarity of local texture and photometric features},
journal = {{EURASIP} J. Image Video Process.},
volume = {2018},
pages = {62},
year = {2018},
url = {https://doi.org/10.1186/s13640-018-0308-4},
doi = {10.1186/S13640-018-0308-4},
timestamp = {Mon, 10 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ejivp/Chan18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/Thavabalasingam18,
author = {Sathesan Thavabalasingam and
Edward B. O'Neil and
Andy C. H. Lee},
title = {Multivoxel pattern similarity suggests the integration of temporal
duration in hippocampal event sequence representations},
journal = {NeuroImage},
volume = {178},
pages = {136--146},
year = {2018},
url = {https://doi.org/10.1016/j.neuroimage.2018.05.036},
doi = {10.1016/J.NEUROIMAGE.2018.05.036},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/neuroimage/Thavabalasingam18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/FrithS18,
author = {Martin C. Frith and
Anish Man Singh Shrestha},
title = {A Simplified Description of Child Tables for Sequence Similarity Search},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {15},
number = {6},
pages = {2067--2073},
year = {2018},
url = {https://doi.org/10.1109/TCBB.2018.2796064},
doi = {10.1109/TCBB.2018.2796064},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/FrithS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/QaziQA18,
author = {Najmul Ikram Qazi and
Muhammad Abdul Qadir and
Muhammad Tanvir Afzal},
title = {Investigating Correlation between Protein Sequence Similarity and
Semantic Similarity Using Gene Ontology Annotations},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {15},
number = {3},
pages = {905--912},
year = {2018},
url = {https://doi.org/10.1109/TCBB.2017.2695542},
doi = {10.1109/TCBB.2017.2695542},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/QaziQA18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcom/ChraitiGA18,
author = {Mohaned Chraiti and
Ali Ghrayeb and
Chadi Assi},
title = {A {NOMA} Scheme Exploiting Partial Similarity Among Users Bit Sequences},
journal = {{IEEE} Trans. Commun.},
volume = {66},
number = {10},
pages = {4923--4935},
year = {2018},
url = {https://doi.org/10.1109/TCOMM.2018.2834928},
doi = {10.1109/TCOMM.2018.2834928},
timestamp = {Tue, 01 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcom/ChraitiGA18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aciids/HoNV18,
author = {Phan Hieu Ho and
Thi Anh Ngoc Nguyen and
Trung Hung Vo},
editor = {Andrzej Sieminski and
Adrianna Kozierkiewicz and
Manuel N{\'{u}}{\~{n}}ez and
Quang{-}Thuy Ha},
title = {{DNA} Sequences Representation Derived from Discrete Wavelet Transformation
for Text Similarity Recognition},
booktitle = {Modern Approaches for Intelligent Information and Database Systems,
- 10th Asian Conference, {ACIIDS} 2018, Dong Hoi City, Vietnam, March
19-21, 2018, Extended Posters},
series = {Studies in Computational Intelligence},
volume = {769},
pages = {75--85},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-76081-0\_7},
doi = {10.1007/978-3-319-76081-0\_7},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/aciids/HoNV18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/adc/KadupitigeR18,
author = {Sidath Randeni Kadupitige and
Uwe R{\"{o}}hm},
editor = {Junhu Wang and
Gao Cong and
Jinjun Chen and
Jianzhong Qi},
title = {Using {SIMD} Instructions to Accelerate Sequence Similarity Searches
Inside a Database System},
booktitle = {Databases Theory and Applications - 29th Australasian Database Conference,
{ADC} 2018, Gold Coast, QLD, Australia, May 24-27, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10837},
pages = {81--93},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-92013-9\_7},
doi = {10.1007/978-3-319-92013-9\_7},
timestamp = {Mon, 27 Jan 2020 12:17:34 +0100},
biburl = {https://dblp.org/rec/conf/adc/KadupitigeR18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amcis/FredricksonMAK18,
author = {Joel Fredrickson and
Michael Mannino and
Omar Alqahtani and
Farnoush Banaei Kashani},
title = {Mortality Prediction Performance using Similarity Measures for Medical
Event Sequences},
booktitle = {24th Americas Conference on Information Systems, {AMCIS} 2018, New
Orleans, LA, USA, August 16-18, 2018},
publisher = {Association for Information Systems},
year = {2018},
url = {https://aisel.aisnet.org/amcis2018/DataScience/Presentations/12},
timestamp = {Mon, 22 Oct 2018 17:24:45 +0200},
biburl = {https://dblp.org/rec/conf/amcis/FredricksonMAK18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icarm/LiuPHSYT18,
author = {Ran Liu and
Madhushanka Padmal and
Marakkalage Sumudu Hasala and
Thiruketheeswaran Shaganan and
Chau Yuen and
U{-}Xuan Tan},
title = {Localizing Heterogeneous Access Points using Similarity-based Sequence},
booktitle = {3rd International Conference on Advanced Robotics and Mechatronics,
{ICARM} 2018, Singapore City, Singapore, July 18-20, 2018},
pages = {306--311},
publisher = {{IEEE}},
year = {2018},
url = {https://doi.org/10.1109/ICARM.2018.8610862},
doi = {10.1109/ICARM.2018.8610862},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icarm/LiuPHSYT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ichi/BonomiJ18,
author = {Luca Bonomi and
Xiaoqian Jiang},
title = {Pattern Similarity in Time Interval Sequences},
booktitle = {{IEEE} International Conference on Healthcare Informatics, {ICHI}
2018, New York City, NY, USA, June 4-7, 2018},
pages = {434--435},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.org/10.1109/ICHI.2018.00087},
doi = {10.1109/ICHI.2018.00087},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ichi/BonomiJ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wbir/BrehmerWM18,
author = {Kai Brehmer and
Benjamin Wacker and
Jan Modersitzki},
editor = {Stefan Klein and
Marius Staring and
Stanley Durrleman and
Stefan Sommer},
title = {A Novel Similarity Measure for Image Sequences},
booktitle = {Biomedical Image Registration - 8th International Workshop, {WBIR}
2018, Leiden, The Netherlands, June 28-29, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10883},
pages = {47--56},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-92258-4\_5},
doi = {10.1007/978-3-319-92258-4\_5},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wbir/BrehmerWM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wcsp/PengLS0HZL18,
author = {Linlin Peng and
Junyu Liu and
Min Sheng and
Yan Zhang and
Danni Hou and
Yang Zheng and
Jiandong Li},
title = {AP-sequence Based Fingerprint Similarity Indoor Localization},
booktitle = {10th International Conference on Wireless Communications and Signal
Processing, {WCSP} 2018, Hangzhou, China, October 18-20, 2018},
pages = {1--5},
publisher = {{IEEE}},
year = {2018},
url = {https://doi.org/10.1109/WCSP.2018.8555893},
doi = {10.1109/WCSP.2018.8555893},
timestamp = {Thu, 02 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/wcsp/PengLS0HZL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1801-07013,
author = {Pierre{-}Fran{\c{c}}ois Marteau},
title = {Sequence Covering Similarity for Symbolic Sequence Comparison},
journal = {CoRR},
volume = {abs/1801.07013},
year = {2018},
url = {http://arxiv.org/abs/1801.07013},
eprinttype = {arXiv},
eprint = {1801.07013},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1801-07013.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/SmithP17,
author = {Stephen A. Smith and
James Pease},
title = {Heterogeneous molecular processes among the causes of how sequence
similarity scores can fail to recapitulate phylogeny},
journal = {Briefings Bioinform.},
volume = {18},
number = {3},
pages = {451--457},
year = {2017},
url = {https://doi.org/10.1093/bib/bbw034},
doi = {10.1093/BIB/BBW034},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/SmithP17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/YangZ17,
author = {Lianping Yang and
Weilin Zhang},
title = {A Multiresolution Graphical Representation for Similarity Relationship
and Multiresolution Clustering for Biological Sequences},
journal = {J. Comput. Biol.},
volume = {24},
number = {4},
pages = {299--310},
year = {2017},
url = {https://doi.org/10.1089/cmb.2016.0030},
doi = {10.1089/CMB.2016.0030},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/YangZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/LiY17,
author = {Yang Li and
Jianyi Yang},
title = {Structural and Sequence Similarity Makes a Significant Impact on Machine-Learning-Based
Scoring Functions for Protein-Ligand Interactions},
journal = {J. Chem. Inf. Model.},
volume = {57},
number = {4},
pages = {1007--1012},
year = {2017},
url = {https://doi.org/10.1021/acs.jcim.7b00049},
doi = {10.1021/ACS.JCIM.7B00049},
timestamp = {Fri, 06 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcisd/LiY17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/scpe/HajibabaGS17,
author = {Majid Hajibaba and
Saeid Gorgin and
Mohsen Sharifi},
title = {Sequence Similarity Parallelization over Heterogeneous Computer Clusters
Using Data Parallel Programming Model},
journal = {Scalable Comput. Pract. Exp.},
volume = {18},
number = {1},
pages = {51--66},
year = {2017},
url = {https://doi.org/10.12694/scpe.v18i1.1233},
doi = {10.12694/SCPE.V18I1.1233},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/scpe/HajibabaGS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/HuLDZ17,
author = {Hailong Hu and
Zhong Li and
Hongwei Dong and
Tianhe Zhou},
title = {Graphical Representation and Similarity Analysis of Protein Sequences
Based on Fractal Interpolation},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {14},
number = {1},
pages = {182--192},
year = {2017},
url = {https://doi.org/10.1109/TCBB.2015.2511731},
doi = {10.1109/TCBB.2015.2511731},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/HuLDZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmis/ManninoFKLA17,
author = {Michael Mannino and
Joel Fredrickson and
Farnoush Banaei Kashani and
Iris Linck and
Raghda Alqurashi},
title = {Development and Evaluation of a Similarity Measure for Medical Event
Sequences},
journal = {{ACM} Trans. Manag. Inf. Syst.},
volume = {8},
number = {2-3},
pages = {8:1--8:26},
year = {2017},
url = {https://doi.org/10.1145/3070684},
doi = {10.1145/3070684},
timestamp = {Wed, 12 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tmis/ManninoFKLA17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tsp/CuiYFHL17,
author = {Guolong Cui and
Xianxiang Yu and
Goffredo Foglia and
Yongwei Huang and
Jian Li},
title = {Quadratic Optimization With Similarity Constraint for Unimodular Sequence
Synthesis},
journal = {{IEEE} Trans. Signal Process.},
volume = {65},
number = {18},
pages = {4756--4769},
year = {2017},
url = {https://doi.org/10.1109/TSP.2017.2715010},
doi = {10.1109/TSP.2017.2715010},
timestamp = {Tue, 10 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tsp/CuiYFHL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/acl/MrabetKD17,
author = {Yassine Mrabet and
Halil Kilicoglu and
Dina Demner{-}Fushman},
editor = {Regina Barzilay and
Min{-}Yen Kan},
title = {TextFlow: {A} Text Similarity Measure based on Continuous Sequences},
booktitle = {Proceedings of the 55th Annual Meeting of the Association for Computational
Linguistics, {ACL} 2017, Vancouver, Canada, July 30 - August 4, Volume
1: Long Papers},
pages = {763--772},
publisher = {Association for Computational Linguistics},
year = {2017},
url = {https://doi.org/10.18653/v1/P17-1071},
doi = {10.18653/V1/P17-1071},
timestamp = {Fri, 06 Aug 2021 00:40:58 +0200},
biburl = {https://dblp.org/rec/conf/acl/MrabetKD17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aime/RivaultMD17,
author = {Yann Rivault and
Nolwenn Le Meur and
Olivier Dameron},
editor = {Annette ten Teije and
Christian Popow and
John H. Holmes and
Lucia Sacchi},
title = {A Similarity Measure Based on Care Trajectories as Sequences of Sets},
booktitle = {Artificial Intelligence in Medicine - 16th Conference on Artificial
Intelligence in Medicine, {AIME} 2017, Vienna, Austria, June 21-24,
2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10259},
pages = {278--282},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59758-4\_32},
doi = {10.1007/978-3-319-59758-4\_32},
timestamp = {Tue, 14 May 2019 10:00:54 +0200},
biburl = {https://dblp.org/rec/conf/aime/RivaultMD17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/chase/MahdiHM17,
author = {Md Safiur Rahman Mahdi and
Mohammad Zahidul Hasan and
Noman Mohammed},
editor = {Paolo Bonato and
Honggang Wang},
title = {Secure Sequence Similarity Search on Encrypted Genomic Data},
booktitle = {Proceedings of the Second {IEEE/ACM} International Conference on Connected
Health: Applications, Systems and Engineering Technologies, {CHASE}
2017, Philadelphia, PA, USA, July 17-19, 2017},
pages = {205--213},
publisher = {{IEEE} Computer Society / {ACM}},
year = {2017},
url = {https://doi.org/10.1109/CHASE.2017.79},
doi = {10.1109/CHASE.2017.79},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/chase/MahdiHM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dihu/Hench17,
author = {Christopher Leo Hench},
editor = {Rhian Lewis and
Cecily Raynor and
Dominic Forest and
Michael Sinatra and
St{\'{e}}fan Sinclair},
title = {Prosodic Clustering via Cosine Similarity of Sound Sequence Inventories},
booktitle = {12th Annual International Conference of the Alliance of Digital Humanities
Organizations, {DH} 2017, Montr{\'{e}}al, Canada, August 8-11,
2017, Conference Abstracts},
publisher = {Alliance of Digital Humanities Organizations {(ADHO)}},
year = {2017},
url = {https://dh2017.adho.org/abstracts/141/141.pdf},
timestamp = {Fri, 10 Jul 2020 11:43:01 +0200},
biburl = {https://dblp.org/rec/conf/dihu/Hench17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dsc/PangDLD17,
author = {Tinghai Pang and
Lei Duan and
Jesse Li{-}Ling and
Guozhu Dong},
title = {Mining Similarity-Aware Distinguishing Sequential Patterns from Biomedical
Sequences},
booktitle = {Second {IEEE} International Conference on Data Science in Cyberspace,
{DSC} 2017, Shenzhen, China, June 26-29, 2017},
pages = {43--52},
publisher = {{IEEE} Computer Society},
year = {2017},
url = {https://doi.org/10.1109/DSC.2017.18},
doi = {10.1109/DSC.2017.18},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/dsc/PangDLD17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/BuckinghamCHG17,
author = {Lawrence Buckingham and
Timothy Chappell and
James M. Hogan and
Shlomo Geva},
title = {Similarity Projection: {A} Geometric Measure for Comparison of Biological
Sequences},
booktitle = {13th {IEEE} International Conference on e-Science, e-Science 2017,
Auckland, New Zealand, October 24-27, 2017},
pages = {325--334},
publisher = {{IEEE} Computer Society},
year = {2017},
url = {https://doi.org/10.1109/eScience.2017.46},
doi = {10.1109/ESCIENCE.2017.46},
timestamp = {Wed, 16 Oct 2019 14:14:48 +0200},
biburl = {https://dblp.org/rec/conf/eScience/BuckinghamCHG17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ida/RysavyZ17,
author = {Petr Rysav{\'{y}} and
Filip Zelezn{\'{y}}},
editor = {Niall M. Adams and
Allan Tucker and
David John Weston},
title = {Estimating Sequence Similarity from Contig Sets},
booktitle = {Advances in Intelligent Data Analysis {XVI} - 16th International Symposium,
{IDA} 2017, London, UK, October 26-28, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10584},
pages = {272--283},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-68765-0\_23},
doi = {10.1007/978-3-319-68765-0\_23},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ida/RysavyZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/interspeech/KanekoKHK17,
author = {Takuhiro Kaneko and
Hirokazu Kameoka and
Kaoru Hiramatsu and
Kunio Kashino},
editor = {Francisco Lacerda},
title = {Sequence-to-Sequence Voice Conversion with Similarity Metric Learned
Using Generative Adversarial Networks},
booktitle = {Interspeech 2017, 18th Annual Conference of the International Speech
Communication Association, Stockholm, Sweden, August 20-24, 2017},
pages = {1283--1287},
publisher = {{ISCA}},
year = {2017},
url = {https://doi.org/10.21437/Interspeech.2017-970},
doi = {10.21437/INTERSPEECH.2017-970},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/interspeech/KanekoKHK17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ivic/AdamuZ17,
author = {Alhassan Adamu and
Wan Mohd Nazmee Wan Zainon},
editor = {Halimah Badioze Zaman and
Peter Robinson and
Alan F. Smeaton and
Timothy K. Shih and
Sergio A. Velastin and
Tada Terutoshi and
Azizah Jaafar and
Nazlena Mohamad Ali},
title = {Similarity Assessment of {UML} Sequence Diagrams Using Dynamic Programming},
booktitle = {Advances in Visual Informatics - 5th International Visual Informatics
Conference, {IVIC} 2017, Bangi, Malaysia, November 28-30, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10645},
pages = {270--278},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-70010-6\_25},
doi = {10.1007/978-3-319-70010-6\_25},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ivic/AdamuZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kcap/MaheshwariTSJDL17,
author = {Gaurav Maheshwari and
Priyansh Trivedi and
Harshita Sahijwani and
Kunal Jha and
Sourish Dasgupta and
Jens Lehmann},
editor = {{\'{O}}scar Corcho and
Krzysztof Janowicz and
Giuseppe Rizzo and
Ilaria Tiddi and
Daniel Garijo},
title = {SimDoc: Topic Sequence Alignment based Document Similarity Framework},
booktitle = {Proceedings of the Knowledge Capture Conference, {K-CAP} 2017, Austin,
TX, USA, December 4-6, 2017},
pages = {16:1--16:8},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3148011.3148016},
doi = {10.1145/3148011.3148016},
timestamp = {Fri, 22 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/kcap/MaheshwariTSJDL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pacbb/HosseiniPP17,
author = {Seyed Morteza Hosseini and
Diogo Pratas and
Armando J. Pinho},
editor = {Florentino Fdez{-}Riverola and
Mohd Saberi Mohamad and
Miguel P. Rocha and
Juan F. De Paz and
Tiago Pinto},
title = {On the Role of Inverted Repeats in {DNA} Sequence Similarity},
booktitle = {11th International Conference on Practical Applications of Computational
Biology {\&} Bioinformatics, {PACBB} 2017, Porto, Portugal, 21-23
June, 2017},
series = {Advances in Intelligent Systems and Computing},
volume = {616},
pages = {228--236},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-60816-7\_28},
doi = {10.1007/978-3-319-60816-7\_28},
timestamp = {Wed, 12 Oct 2022 08:58:54 +0200},
biburl = {https://dblp.org/rec/conf/pacbb/HosseiniPP17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/WiwieR17,
author = {Christian Wiwie and
Richard R{\"{o}}ttger},
editor = {Russ B. Altman and
A. Keith Dunker and
Lawrence Hunter and
Marylyn D. Ritchie and
Teri E. Klein},
title = {On the power and limits of sequence similarity based clustering of
proteins into families},
booktitle = {Biocomputing 2017: Proceedings of the Pacific Symposium, Kohala Coast,
Hawaii, USA, January 3-7, 2017},
pages = {39--50},
year = {2017},
url = {http://psb.stanford.edu/psb-online/proceedings/psb17/wiwie.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/psb/WiwieR17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/spawc/LiuYDJLT17,
author = {Ran Liu and
Chau Yuen and
Tri{-}Nhut Do and
Ye Jiang and
Xiang Liu and
U{-}Xuan Tan},
title = {Indoor positioning using similarity-based sequence and dead reckoning
without training},
booktitle = {18th {IEEE} International Workshop on Signal Processing Advances in
Wireless Communications, {SPAWC} 2017, Sapporo, Japan, July 3-6, 2017},
pages = {1--5},
publisher = {{IEEE}},
year = {2017},
url = {https://doi.org/10.1109/SPAWC.2017.8227641},
doi = {10.1109/SPAWC.2017.8227641},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/spawc/LiuYDJLT17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/LiuYDJLT17a,
author = {Ran Liu and
Chau Yuen and
Tri{-}Nhut Do and
Ye Jiang and
Xiang Liu and
U{-}Xuan Tan},
title = {Indoor Positioning using Similarity-based Sequence and Dead Reckoning
without Training},
journal = {CoRR},
volume = {abs/1705.04934},
year = {2017},
url = {http://arxiv.org/abs/1705.04934},
eprinttype = {arXiv},
eprint = {1705.04934},
timestamp = {Mon, 19 Aug 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/LiuYDJLT17a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/RysavyZ17,
author = {Petr Rysav{\'{y}} and
Filip Zelezn{\'{y}}},
title = {Estimating Sequence Similarity from Read Sets for Clustering Next-Generation
Sequencing data},
journal = {CoRR},
volume = {abs/1705.06125},
year = {2017},
url = {http://arxiv.org/abs/1705.06125},
eprinttype = {arXiv},
eprint = {1705.06125},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/RysavyZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1708-02629,
author = {Shibiao Wan and
Man{-}Wai Mak and
Sun{-}Yuan Kung},
title = {Protecting Genomic Privacy by a Sequence-Similarity Based Obfuscation
Method},
journal = {CoRR},
volume = {abs/1708.02629},
year = {2017},
url = {http://arxiv.org/abs/1708.02629},
eprinttype = {arXiv},
eprint = {1708.02629},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1708-02629.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/abi/Caoili16,
author = {Salvador Eugenio C. Caoili},
title = {Expressing Redundancy among Linear-Epitope Sequence Data Based on
Residue-Level Physicochemical Similarity in the Context of Antigenic
Cross-Reaction},
journal = {Adv. Bioinformatics},
volume = {2016},
pages = {1276594:1--1276594:13},
year = {2016},
url = {https://doi.org/10.1155/2016/1276594},
doi = {10.1155/2016/1276594},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/abi/Caoili16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BorozanF16,
author = {Ivan Borozan and
Vincent Ferretti},
title = {{CSSSCL:} a python package that uses combined sequence similarity
scores for accurate taxonomic classification of long and short sequence
reads},
journal = {Bioinform.},
volume = {32},
number = {3},
pages = {453--455},
year = {2016},
url = {https://doi.org/10.1093/bioinformatics/btv587},
doi = {10.1093/BIOINFORMATICS/BTV587},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BorozanF16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/VujaklijaBPBGV16,
author = {Ivan Vujaklija and
Ana Bielen and
Tina Paradzik and
Sinisa Bidin and
Pavle Goldstein and
Dusica Vujaklija},
title = {An effective approach for annotation of protein families with low
sequence similarity and conserved motifs: identifying {GDSL} hydrolases
across the plant kingdom},
journal = {{BMC} Bioinform.},
volume = {17},
pages = {91},
year = {2016},
url = {https://doi.org/10.1186/s12859-016-0919-7},
doi = {10.1186/S12859-016-0919-7},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/VujaklijaBPBGV16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cbrmd/Perner16,
author = {Petra Perner},
title = {A New Similarity Measure for Sequences and Time-Series Applied to
Spectrometer Signal Analysis},
journal = {Trans. Case Based Reason.},
volume = {5},
number = {1},
pages = {19--31},
year = {2016},
url = {http://www.ibai-publishing.org/journal/issue\_cbr/2016\_october/cbr\_5\_1\_19-31.php},
timestamp = {Wed, 25 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cbrmd/Perner16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dam/Grabowski16,
author = {Szymon Grabowski},
title = {New tabulation and sparse dynamic programming based techniques for
sequence similarity problems},
journal = {Discret. Appl. Math.},
volume = {212},
pages = {96--103},
year = {2016},
url = {https://doi.org/10.1016/j.dam.2015.10.040},
doi = {10.1016/J.DAM.2015.10.040},
timestamp = {Thu, 11 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dam/Grabowski16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/gpb/KoboriM16,
author = {Yusei Kobori and
Satoshi Mizuta},
title = {Similarity Estimation Between {DNA} Sequences Based on Local Pattern
Histograms of Binary Images},
journal = {Genom. Proteom. Bioinform.},
volume = {14},
number = {2},
pages = {103--112},
year = {2016},
url = {https://doi.org/10.1016/j.gpb.2015.09.007},
doi = {10.1016/J.GPB.2015.09.007},
timestamp = {Thu, 20 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/gpb/KoboriM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jaciii/KongKJ16,
author = {Liang Kong and
Lingfu Kong and
Rong Jing},
title = {Improving the Prediction of Protein Structural Classfor Low-Similarity
Sequences by Incorporating Evolutionaryand Structural Information},
journal = {J. Adv. Comput. Intell. Intell. Informatics},
volume = {20},
number = {3},
pages = {402--411},
year = {2016},
url = {https://doi.org/10.20965/jaciii.2016.p0402},
doi = {10.20965/JACIII.2016.P0402},
timestamp = {Tue, 21 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jaciii/KongKJ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/ChenTAMWM16,
author = {Yu{-}Chen Chen and
Robert Tolbert and
Alex M. Aronov and
Georgia B. McGaughey and
W. Patrick Walters and
Lidio Meireles},
title = {Prediction of Protein Pairs Sharing Common Active Ligands Using Protein
Sequence, Structure, and Ligand Similarity},
journal = {J. Chem. Inf. Model.},
volume = {56},
number = {9},
pages = {1734--1745},
year = {2016},
url = {https://doi.org/10.1021/acs.jcim.6b00118},
doi = {10.1021/ACS.JCIM.6B00118},
timestamp = {Fri, 06 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcisd/ChenTAMWM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcmse/Mezey16a,
author = {Paul G. Mezey},
title = {Iterated similarity sequences and factorial level similarities in
databases},
journal = {J. Comput. Methods Sci. Eng.},
volume = {16},
number = {4},
pages = {719--727},
year = {2016},
url = {https://doi.org/10.3233/JCM-160653},
doi = {10.3233/JCM-160653},
timestamp = {Thu, 02 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcmse/Mezey16a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/HuaYZ16,
author = {Keru Hua and
Qin Yu and
Ruiming Zhang},
title = {A Guaranteed Similarity Metric Learning Framework for Biological Sequence
Comparison},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {13},
number = {5},
pages = {868--877},
year = {2016},
url = {https://doi.org/10.1109/TCBB.2015.2495186},
doi = {10.1109/TCBB.2015.2495186},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/HuaYZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/ApostolicoGLP16,
author = {Alberto Apostolico and
Concettina Guerra and
Gad M. Landau and
Cinzia Pizzi},
title = {Sequence similarity measures based on bounded hamming distance},
journal = {Theor. Comput. Sci.},
volume = {638},
pages = {76--90},
year = {2016},
url = {https://doi.org/10.1016/j.tcs.2016.01.023},
doi = {10.1016/J.TCS.2016.01.023},
timestamp = {Wed, 17 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tcs/ApostolicoGLP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tkde/MontanariBCPCM16,
author = {Piero Montanari and
Ilaria Bartolini and
Paolo Ciaccia and
Marco Patella and
Stefano Ceri and
Marco Masseroli},
title = {Pattern Similarity Search in Genomic Sequences},
journal = {{IEEE} Trans. Knowl. Data Eng.},
volume = {28},
number = {11},
pages = {3053--3067},
year = {2016},
url = {https://doi.org/10.1109/TKDE.2016.2595582},
doi = {10.1109/TKDE.2016.2595582},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tkde/MontanariBCPCM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tnn/HoDR16,
author = {Shen{-}Shyang Ho and
Peng Dai and
Frank Rudzicz},
title = {Manifold Learning for Multivariate Variable-Length Sequences With
an Application to Similarity Search},
journal = {{IEEE} Trans. Neural Networks Learn. Syst.},
volume = {27},
number = {6},
pages = {1333--1344},
year = {2016},
url = {https://doi.org/10.1109/TNNLS.2015.2399102},
doi = {10.1109/TNNLS.2015.2399102},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tnn/HoDR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/acl/ListLB16,
author = {Johann{-}Mattis List and
Philippe Lopez and
Eric Bapteste},
title = {Using Sequence Similarity Networks to Identify Partial Cognates in
Multilingual Wordlists},
booktitle = {Proceedings of the 54th Annual Meeting of the Association for Computational
Linguistics, {ACL} 2016, August 7-12, 2016, Berlin, Germany, Volume
2: Short Papers},
publisher = {The Association for Computer Linguistics},
year = {2016},
url = {https://doi.org/10.18653/v1/p16-2097},
doi = {10.18653/V1/P16-2097},
timestamp = {Fri, 06 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/acl/ListLB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/LinAJJ16,
author = {Jie Lin and
Donald A. Adjeroh and
Bing{-}Hua Jiang and
Yue Jiang},
editor = {Tianhai Tian and
Qinghua Jiang and
Yunlong Liu and
Kevin Burrage and
Jiangning Song and
Yadong Wang and
Xiaohua Hu and
Shinichi Morishita and
Qian Zhu and
Guohua Wang},
title = {{K2:} Efficient alignment-free sequence similarity measurement using
the Kendall statistic},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2016, Shenzhen, China, December 15-18, 2016},
pages = {1128--1132},
publisher = {{IEEE} Computer Society},
year = {2016},
url = {https://doi.org/10.1109/BIBM.2016.7822679},
doi = {10.1109/BIBM.2016.7822679},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/LinAJJ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bwcca/CuiWDM16,
author = {Baojiang Cui and
Chong Wang and
Guowei Dong and
Jinxin Ma},
editor = {Leonard Barolli and
Fatos Xhafa and
Kangbin Yim},
title = {A program behavior recognition algorithm based on assembly instruction
sequence similarity},
booktitle = {Advances on Broad-Band Wireless Computing, Communication and Applications,
Proceedings of the 11th International Conference On Broad-Band Wireless
Computing, Communication and Applications, {BWCCA} 2016, Soonchunhyang
University, Asan, Korea, November 5-7, 2016},
series = {Lecture Notes on Data Engineering and Communications Technologies},
volume = {2},
pages = {13--20},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-49106-6\_2},
doi = {10.1007/978-3-319-49106-6\_2},
timestamp = {Mon, 10 Jul 2017 17:07:40 +0200},
biburl = {https://dblp.org/rec/conf/bwcca/CuiWDM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ida/RysavyZ16,
author = {Petr Rysav{\'{y}} and
Filip Zelezn{\'{y}}},
editor = {Henrik Bostr{\"{o}}m and
Arno J. Knobbe and
Carlos Soares and
Panagiotis Papapetrou},
title = {Estimating Sequence Similarity from Read Sets for Clustering Sequencing
Data},
booktitle = {Advances in Intelligent Data Analysis {XV} - 15th International Symposium,
{IDA} 2016, Stockholm, Sweden, October 13-15, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9897},
pages = {204--214},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-46349-0\_18},
doi = {10.1007/978-3-319-46349-0\_18},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ida/RysavyZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miwai/JinZYNWH16,
author = {Xin Jin and
Dongming Zhou and
Shaowen Yao and
Rencan Nie and
Quan Wang and
Kangjian He},
editor = {Chattrakul Sombattheera and
Frieder Stolzenburg and
Fangzhen Lin and
Abhaya C. Nayak},
title = {Analysis of Similarity/Dissimilarity of {DNA} Sequences Based on Pulse
Coupled Neural Network},
booktitle = {Multi-disciplinary Trends in Artificial Intelligence - 10th International
Workshop, {MIWAI} 2016, Chiang Mai, Thailand, December 7-9, 2016,
Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10053},
pages = {279--287},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-49397-8\_24},
doi = {10.1007/978-3-319-49397-8\_24},
timestamp = {Tue, 14 Feb 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/miwai/JinZYNWH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/mldm/Perner16,
author = {Petra Perner},
editor = {Petra Perner},
title = {Representation of 1-D Signals by a 0{\_}1 Sequence and Similarity-Based
Interpretation: {A} Case-Based Reasoning Approach},
booktitle = {Machine Learning and Data Mining in Pattern Recognition - 12th International
Conference, {MLDM} 2016, New York, NY, USA, July 16-21, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9729},
pages = {728--739},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-41920-6\_55},
doi = {10.1007/978-3-319-41920-6\_55},
timestamp = {Tue, 14 May 2019 10:00:53 +0200},
biburl = {https://dblp.org/rec/conf/mldm/Perner16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sisap/SedmidubskyEZ16,
author = {Jan Sedmidubsk{\'{y}} and
Petr Elias and
Pavel Zezula},
editor = {Laurent Amsaleg and
Michael E. Houle and
Erich Schubert},
title = {Similarity Searching in Long Sequences of Motion Capture Data},
booktitle = {Similarity Search and Applications - 9th International Conference,
{SISAP} 2016, Tokyo, Japan, October 24-26, 2016. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9939},
pages = {271--285},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-46759-7\_21},
doi = {10.1007/978-3-319-46759-7\_21},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/sisap/SedmidubskyEZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/MaheshwariTSJDL16,
author = {Gaurav Maheshwari and
Priyansh Trivedi and
Harshita Sahijwani and
Kunal Jha and
Sourish Dasgupta and
Jens Lehmann},
title = {SimDoc: Topic Sequence Alignment based Document Similarity Framework},
journal = {CoRR},
volume = {abs/1611.04822},
year = {2016},
url = {http://arxiv.org/abs/1611.04822},
eprinttype = {arXiv},
eprint = {1611.04822},
timestamp = {Wed, 27 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/MaheshwariTSJDL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/RajRR16,
author = {M. S. B. Phridvi Raj and
Vangipuram Radhakrishna and
C. V. Guru Rao},
title = {A Novel Gaussian Based Similarity Measure for Clustering Customer
Transactions Using Transaction Sequence Vector},
journal = {CoRR},
volume = {abs/1604.05274},
year = {2016},
url = {http://arxiv.org/abs/1604.05274},
eprinttype = {arXiv},
eprint = {1604.05274},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/RajRR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BorozanWF15,
author = {Ivan Borozan and
Stuart N. Watt and
Vincent Ferretti},
title = {Integrating alignment-based and alignment-free sequence similarity
measures for biological sequence classification},
journal = {Bioinform.},
volume = {31},
number = {9},
pages = {1396--1404},
year = {2015},
url = {https://doi.org/10.1093/bioinformatics/btv006},
doi = {10.1093/BIOINFORMATICS/BTV006},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BorozanWF15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MeierS15,
author = {Armin Meier and
Johannes S{\"{o}}ding},
title = {Context similarity scoring improves protein sequence alignments in
the midnight zone},
journal = {Bioinform.},
volume = {31},
number = {5},
pages = {674--681},
year = {2015},
url = {https://doi.org/10.1093/bioinformatics/btu697},
doi = {10.1093/BIOINFORMATICS/BTU697},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MeierS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SuzekWHMW15,
author = {Baris E. Suzek and
Yuqi Wang and
Hongzhan Huang and
Peter B. McGarvey and
Cathy H. Wu},
title = {UniRef clusters: a comprehensive and scalable alternative for improving
sequence similarity searches},
journal = {Bioinform.},
volume = {31},
number = {6},
pages = {926--932},
year = {2015},
url = {https://doi.org/10.1093/bioinformatics/btu739},
doi = {10.1093/BIOINFORMATICS/BTU739},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SuzekWHMW15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cmmm/LiangLZ15,
author = {Yunyun Liang and
Sanyang Liu and
Shengli Zhang},
title = {Prediction of Protein Structural Classes for Low-Similarity Sequences
Based on Consensus Sequence and Segmented {PSSM}},
journal = {Comput. Math. Methods Medicine},
volume = {2015},
pages = {370756:1--370756:9},
year = {2015},
url = {https://doi.org/10.1155/2015/370756},
doi = {10.1155/2015/370756},
timestamp = {Sat, 25 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cmmm/LiangLZ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/datamine/EghoRCJN15,
author = {Elias Egho and
Chedy Ra{\"{\i}}ssi and
Toon Calders and
Nicolas Jay and
Amedeo Napoli},
title = {On measuring similarity for sequences of itemsets},
journal = {Data Min. Knowl. Discov.},
volume = {29},
number = {3},
pages = {732--764},
year = {2015},
url = {https://doi.org/10.1007/s10618-014-0362-1},
doi = {10.1007/S10618-014-0362-1},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/datamine/EghoRCJN15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijfcs/Arslan15,
author = {Abdullah N. Arslan},
title = {Fast Algorithms for Local Similarity Queries in Two Sequences},
journal = {Int. J. Found. Comput. Sci.},
volume = {26},
number = {5},
pages = {625--642},
year = {2015},
url = {https://doi.org/10.1142/S0129054115500355},
doi = {10.1142/S0129054115500355},
timestamp = {Sat, 27 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijfcs/Arslan15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/informaticaLT/DziugysNS15,
author = {Algis Dziugys and
Robertas Navakas and
Nerijus Striugas},
title = {A Normalized Parameter for Similarity/Dissimilarity Characterization
of Sequences},
journal = {Informatica},
volume = {26},
number = {2},
pages = {241--258},
year = {2015},
url = {http://content.iospress.com/articles/informatica/inf1055},
timestamp = {Tue, 26 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/informaticaLT/DziugysNS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/ODriscollBCKWGS15,
author = {Aisling O'Driscoll and
Vladislav Belogrudov and
John Carroll and
Kai Kropp and
Paul Walsh and
Peter Ghazal and
Roy D. Sleator},
title = {{HBLAST:} Parallelised sequence similarity - {A} Hadoop MapReducable
basic local alignment search tool},
journal = {J. Biomed. Informatics},
volume = {54},
pages = {58--64},
year = {2015},
url = {https://doi.org/10.1016/j.jbi.2015.01.008},
doi = {10.1016/J.JBI.2015.01.008},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/ODriscollBCKWGS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/BourgeadeCA15,
author = {Laetitia Bourgeade and
C{\'{e}}dric Chauve and
Julien Allali},
title = {Chaining Sequence/Structure Seeds for Computing {RNA} Similarity},
journal = {J. Comput. Biol.},
volume = {22},
number = {3},
pages = {205--217},
year = {2015},
url = {https://doi.org/10.1089/cmb.2014.0283},
doi = {10.1089/CMB.2014.0283},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/BourgeadeCA15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jsjkx/ZhangCG18,
author = {Hao Zhang and
Lifei Chen and
Gongde Guo},
title = {{\unicode{35268}}{\unicode{33539}}{\unicode{21270}}{\unicode{30456}}{\unicode{20284}}{\unicode{24230}}{\unicode{30340}}{\unicode{31526}}{\unicode{21495}}{\unicode{24207}}{\unicode{21015}}{\unicode{23618}}{\unicode{27425}}{\unicode{32858}}{\unicode{31867}}
(Hierarchical Clustering of Categorical Sequences by Similarity Normalization)},
journal = {{\unicode{35745}}{\unicode{31639}}{\unicode{26426}}{\unicode{31185}}{\unicode{23398}}},
volume = {42},
number = {5},
pages = {114--118},
year = {2015},
url = {https://doi.org/10.11896/j.issn.1002-137X.2015.05.023},
doi = {10.11896/J.ISSN.1002-137X.2015.05.023},
timestamp = {Mon, 27 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jsjkx/ZhangCG18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/PiovesanGLFT15,
author = {Damiano Piovesan and
Manuel Giollo and
Emanuela Leonardi and
Carlo Ferrari and
Silvio C. E. Tosatto},
title = {{INGA:} protein function prediction combining interaction networks,
domain assignments and sequence similarity},
journal = {Nucleic Acids Res.},
volume = {43},
number = {Webserver-Issue},
pages = {W134--W140},
year = {2015},
url = {https://doi.org/10.1093/nar/gkv523},
doi = {10.1093/NAR/GKV523},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/PiovesanGLFT15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/YangTLL15,
author = {Lina Yang and
Yuan Yan Tang and
Yang Lu and
Huiwu Luo},
title = {A Fractal Dimension and Wavelet Transform Based Method for Protein
Sequence Similarity Analysis},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {12},
number = {2},
pages = {348--359},
year = {2015},
url = {https://doi.org/10.1109/TCBB.2014.2363480},
doi = {10.1109/TCBB.2014.2363480},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/YangTLL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tgrs/Chen15,
author = {Wei Chen},
title = {Current Motion Tracking from Satellite Image Sequence With Global
Similarity Optimization Model},
journal = {{IEEE} Trans. Geosci. Remote. Sens.},
volume = {53},
number = {2},
pages = {1008--1015},
year = {2015},
url = {https://doi.org/10.1109/TGRS.2014.2332044},
doi = {10.1109/TGRS.2014.2332044},
timestamp = {Tue, 12 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tgrs/Chen15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csoc/PhridviRajRKR15,
author = {M. S. B. PhridviRaj and
Vangipuram Radhakrishna and
K. Vinay Kumar and
C. V. Guru Rao},
editor = {Radek Silhavy and
Roman Senkerik and
Zuzana Kom{\'{\i}}nkov{\'{a}} Oplatkov{\'{a}} and
Zdenka Prokopova and
Petr Silhavy},
title = {A Novel Similarity Measure for Clustering Customer Transactions Using
Ternary Sequence Vector},
booktitle = {Artificial Intelligence Perspectives and Applications - Proceedings
of the 4th Computer Science On-line Conference 2015 (CSOC2015), Vol
1: Artificial Intelligence Perspectives and Applications},
series = {Advances in Intelligent Systems and Computing},
volume = {347},
pages = {297--308},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-18476-0\_30},
doi = {10.1007/978-3-319-18476-0\_30},
timestamp = {Fri, 02 Nov 2018 09:47:15 +0100},
biburl = {https://dblp.org/rec/conf/csoc/PhridviRajRKR15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cybconf/YangTWLPYZLS15,
author = {Lina Yang and
Yuan Yan Tang and
Yulong Wang and
Huiwu Luo and
Jianjia Pan and
Haoliang Yuan and
Xianwei Zheng and
Chunli Li and
Ting Shu},
title = {Similarity analysis based on sparse representation for protein sequence
comparison},
booktitle = {2nd {IEEE} International Conference on Cybernetics, {CYBCONF} 2015,
Gdynia, Poland, June 24-26, 2015},
pages = {382--387},
publisher = {{IEEE}},
year = {2015},
url = {https://doi.org/10.1109/CYBConf.2015.7175964},
doi = {10.1109/CYBCONF.2015.7175964},
timestamp = {Wed, 16 Oct 2019 14:14:56 +0200},
biburl = {https://dblp.org/rec/conf/cybconf/YangTWLPYZLS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/focs/AbboudBW15,
author = {Amir Abboud and
Arturs Backurs and
Virginia Vassilevska Williams},
editor = {Venkatesan Guruswami},
title = {Tight Hardness Results for {LCS} and Other Sequence Similarity Measures},
booktitle = {{IEEE} 56th Annual Symposium on Foundations of Computer Science, {FOCS}
2015, Berkeley, CA, USA, 17-20 October, 2015},
pages = {59--78},
publisher = {{IEEE} Computer Society},
year = {2015},
url = {https://doi.org/10.1109/FOCS.2015.14},
doi = {10.1109/FOCS.2015.14},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/focs/AbboudBW15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/huc/KudoARK15,
author = {Riki Kudo and
Olivier Augereau and
Takuto Rou and
Koichi Kise},
editor = {Kenji Mase and
Marc Langheinrich and
Daniel Gatica{-}Perez and
Hans Gellersen and
Tanzeem Choudhury and
Koji Yatani},
title = {Reading similarity measure based on comparison of fixation sequences},
booktitle = {Proceedings of the 2015 {ACM} International Joint Conference on Pervasive
and Ubiquitous Computing and Proceedings of the 2015 {ACM} International
Symposium on Wearable Computers, UbiComp/ISWC Adjunct 2015, Osaka,
Japan, September 7-11, 2015},
pages = {1221--1226},
publisher = {{ACM}},
year = {2015},
url = {https://doi.org/10.1145/2800835.2807935},
doi = {10.1145/2800835.2807935},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/huc/KudoARK15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pacrim/KonakaM15,
author = {Fumito Konaka and
Takao Miura},
title = {Semantic similarity for sequenced shingles},
booktitle = {{IEEE} Pacific Rim Conference on Communications, Computers and Signal
Processing, {PACRIM} 2015, Victoria, BC, Canada, August 24-26, 2015},
pages = {12--17},
publisher = {{IEEE}},
year = {2015},
url = {https://doi.org/10.1109/PACRIM.2015.7334801},
doi = {10.1109/PACRIM.2015.7334801},
timestamp = {Mon, 09 Aug 2021 14:54:01 +0200},
biburl = {https://dblp.org/rec/conf/pacrim/KonakaM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/rcis/AlgergawyK15,
author = {Alsayed Algergawy and
Friederike Klan},
title = {A sequence-based tree similarity search},
booktitle = {9th {IEEE} International Conference on Research Challenges in Information
Science, {RCIS} 2015, Athens, Greece, May 13-15, 2015},
pages = {121--126},
publisher = {{IEEE}},
year = {2015},
url = {https://doi.org/10.1109/RCIS.2015.7128871},
doi = {10.1109/RCIS.2015.7128871},
timestamp = {Wed, 16 Oct 2019 14:14:57 +0200},
biburl = {https://dblp.org/rec/conf/rcis/AlgergawyK15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/rskt/ShimKI15,
author = {Yu Jin Shim and
TaeGuen Kim and
Eul Gyu Im},
editor = {Davide Ciucci and
Guoyin Wang and
Sushmita Mitra and
Wei{-}Zhi Wu},
title = {A Study on Similarity Calculation Method for {API} Invocation Sequences},
booktitle = {Rough Sets and Knowledge Technology - 10th International Conference,
{RSKT} 2015, held as part of the International Joint Conference on
Rough Sets, {IJCRS} 2015, Tianjin, China, November 20-23, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9436},
pages = {492--501},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-25754-9\_43},
doi = {10.1007/978-3-319-25754-9\_43},
timestamp = {Mon, 16 Mar 2020 17:44:10 +0100},
biburl = {https://dblp.org/rec/conf/rskt/ShimKI15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sisap/KonakaM15,
author = {Fumito Konaka and
Takao Miura},
editor = {Giuseppe Amato and
Richard Connor and
Fabrizio Falchi and
Claudio Gennaro},
title = {Textual Similarity for Word Sequences},
booktitle = {Similarity Search and Applications - 8th International Conference,
{SISAP} 2015, Glasgow, UK, October 12-14, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9371},
pages = {244--249},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-25087-8\_23},
doi = {10.1007/978-3-319-25087-8\_23},
timestamp = {Fri, 18 Nov 2022 17:12:34 +0100},
biburl = {https://dblp.org/rec/conf/sisap/KonakaM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:books/degruyter/p/AndreevB15,
author = {Sergey N. Andreev and
Vadim Borisov},
editor = {George K. Mikros and
J{\'{a}}n Macutek},
title = {Linguistic Analysis Based on Fuzzy Similarity Models},
booktitle = {Sequences in Language and Text},
series = {Quantitative Linguistics},
volume = {69},
pages = {7--34},
publisher = {DeGruyter},
year = {2015},
url = {https://doi.org/10.1515/9783110362879-003},
doi = {10.1515/9783110362879-003},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/books/degruyter/p/AndreevB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:books/degruyter/p/RamaB15,
author = {Taraka Rama and
Lars Borin},
editor = {George K. Mikros and
J{\'{a}}n Macutek},
title = {Comparative Evaluation of String Similarity Measures for Automatic
Language Classification},
booktitle = {Sequences in Language and Text},
series = {Quantitative Linguistics},
volume = {69},
pages = {171--200},
publisher = {DeGruyter},
year = {2015},
url = {https://doi.org/10.1515/9783110362879-012},
doi = {10.1515/9783110362879-012},
timestamp = {Tue, 16 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/books/degruyter/p/RamaB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/AbboudBW15,
author = {Amir Abboud and
Arturs Backurs and
Virginia Vassilevska Williams},
title = {Quadratic-Time Hardness of {LCS} and other Sequence Similarity Measures},
journal = {CoRR},
volume = {abs/1501.07053},
year = {2015},
url = {http://arxiv.org/abs/1501.07053},
eprinttype = {arXiv},
eprint = {1501.07053},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/AbboudBW15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BaoYB14,
author = {Junpeng Bao and
Ruiyu Yuan and
Zhe Bao},
title = {An improved alignment-free model for dna sequence similarity metric},
journal = {{BMC} Bioinform.},
volume = {15},
pages = {321},
year = {2014},
url = {https://doi.org/10.1186/1471-2105-15-321},
doi = {10.1186/1471-2105-15-321},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BaoYB14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JandaPBBKSKM14,
author = {Jan{-}Oliver Janda and
Ajmal Popal and
Jochen Bauer and
Markus Busch and
Michael Klocke and
Wolfgang Spitzer and
J{\"{o}}rg Keller and
Rainer Merkl},
title = {H2rs: Deducing evolutionary and functionally important residue positions
by means of an entropy and similarity based analysis of multiple sequence
alignments},
journal = {{BMC} Bioinform.},
volume = {15},
pages = {118},
year = {2014},
url = {https://doi.org/10.1186/1471-2105-15-118},
doi = {10.1186/1471-2105-15-118},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JandaPBBKSKM14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WongMEE14,
author = {Wing{-}Cheong Wong and
Sebastian Maurer{-}Stroh and
Birgit Eisenhaber and
Frank Eisenhaber},
title = {On the necessity of dissecting sequence similarity scores into segment-specific
contributions for inferring protein homology, function prediction
and annotation},
journal = {{BMC} Bioinform.},
volume = {15},
pages = {166},
year = {2014},
url = {https://doi.org/10.1186/1471-2105-15-166},
doi = {10.1186/1471-2105-15-166},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/WongMEE14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/KingATW14,
author = {Brian R. King and
Maurice Aburdene and
Alex Thompson and
Zach Warres},
title = {Application of discrete Fourier inter-coefficient difference for assessing
genetic sequence similarity},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2014},
pages = {8},
year = {2014},
url = {https://doi.org/10.1186/1687-4153-2014-8},
doi = {10.1186/1687-4153-2014-8},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/KingATW14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ivs/VrotsouYC14,
author = {Katerina Vrotsou and
Anders Ynnerman and
Matthew Cooper},
title = {Are we what we do? Exploring group behaviour through user-defined
event-sequence similarity},
journal = {Inf. Vis.},
volume = {13},
number = {3},
pages = {232--247},
year = {2014},
url = {https://doi.org/10.1177/1473871613477852},
doi = {10.1177/1473871613477852},
timestamp = {Thu, 24 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ivs/VrotsouYC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jisis/ChoKSPCI14,
author = {In Kyeom Cho and
TaeGuen Kim and
Yu Jin Shim and
Haeryong Park and
Bomin Choi and
Eul Gyu Im},
title = {Malware Similarity Analysis using {API} Sequence Alignments},
journal = {J. Internet Serv. Inf. Secur.},
volume = {4},
number = {4},
pages = {103--114},
year = {2014},
url = {https://doi.org/10.22667/JISIS.2014.11.31.103},
doi = {10.22667/JISIS.2014.11.31.103},
timestamp = {Thu, 23 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jisis/ChoKSPCI14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/netmahib/NagiB14,
author = {Sajid Nagi and
Dhruba K. Bhattacharyya},
title = {Cluster analysis of cancer data using semantic similarity, sequence
similarity and biological measures},
journal = {Netw. Model. Anal. Health Informatics Bioinform.},
volume = {3},
number = {1},
year = {2014},
url = {https://doi.org/10.1007/s13721-014-0067-9},
doi = {10.1007/S13721-014-0067-9},
timestamp = {Tue, 08 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/netmahib/NagiB14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/sqj/FangCWZ14,
author = {Chunrong Fang and
Zhenyu Chen and
Kun Wu and
Zhihong Zhao},
title = {Similarity-based test case prioritization using ordered sequences
of program entities},
journal = {Softw. Qual. J.},
volume = {22},
number = {2},
pages = {335--361},
year = {2014},
url = {https://doi.org/10.1007/s11219-013-9224-0},
doi = {10.1007/S11219-013-9224-0},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/sqj/FangCWZ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dcc/ApostolicoGP14,
author = {Alberto Apostolico and
Concettina Guerra and
Cinzia Pizzi},
editor = {Ali Bilgin and
Michael W. Marcellin and
Joan Serra{-}Sagrist{\`{a}} and
James A. Storer},
title = {Alignment Free Sequence Similarity with Bounded Hamming Distance},
booktitle = {Data Compression Conference, {DCC} 2014, Snowbird, UT, USA, 26-28
March, 2014},
pages = {183--192},
publisher = {{IEEE}},
year = {2014},
url = {https://doi.org/10.1109/DCC.2014.57},
doi = {10.1109/DCC.2014.57},
timestamp = {Wed, 16 Oct 2019 14:14:57 +0200},
biburl = {https://dblp.org/rec/conf/dcc/ApostolicoGP14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eccb/BourgeadeAC14,
author = {Laetitia Bourgeade and
Julien Allali and
C{\'{e}}dric Chauve},
editor = {Fabrice Jossinet and
Yann Ponty and
J{\'{e}}r{\^{o}}me Waldisp{\"{u}}hl},
title = {Chaining Sequence/Structure Seeds for Computing {RNA} Similarity},
booktitle = {Proceedings of the 1st Workshop on Computational Methods for Structural
RNAs {(CMSR} 2014), Strasbourg, France, September 7, 2014},
pages = {1--12},
publisher = {McGill University},
year = {2014},
url = {https://doi.org/10.15455/CMSR.2014.0001},
doi = {10.15455/CMSR.2014.0001},
timestamp = {Mon, 08 Feb 2021 13:26:46 +0100},
biburl = {https://dblp.org/rec/conf/eccb/BourgeadeAC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/his2/YuCX14,
author = {Shaode Yu and
Xuyin Cheng and
Yaoqin Xie},
editor = {Yanchun Zhang and
Guiqing Yao and
Jing He and
Lei Wang and
Neil R. Smalheiser and
Xiao{-}Xia Yin},
title = {Feasibility Study of Signal Similarity Measurements for Improving
Morphological Evaluation of Human Brain with Images from Multi-Echo
T2-Star Weighted {MR} Sequences},
booktitle = {Health Information Science - Third International Conference, {HIS}
2014, Shenzhen, China, April 22-23, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8423},
pages = {237--247},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-06269-3\_26},
doi = {10.1007/978-3-319-06269-3\_26},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/his2/YuCX14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icassp/FerreiraP14,
author = {Paulo Jorge S. G. Ferreira and
Armando J. Pinho},
title = {Compression-based normal similarity measures for {DNA} sequences},
booktitle = {{IEEE} International Conference on Acoustics, Speech and Signal Processing,
{ICASSP} 2014, Florence, Italy, May 4-9, 2014},
pages = {419--423},
publisher = {{IEEE}},
year = {2014},
url = {https://doi.org/10.1109/ICASSP.2014.6853630},
doi = {10.1109/ICASSP.2014.6853630},
timestamp = {Wed, 16 Oct 2019 14:14:52 +0200},
biburl = {https://dblp.org/rec/conf/icassp/FerreiraP14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/igarss/Chen14,
author = {Wei Chen},
title = {Current estimation from satellite image sequence with global similarity
optimization model},
booktitle = {2014 {IEEE} Geoscience and Remote Sensing Symposium, {IGARSS} 2014,
Quebec City, QC, Canada, July 13-18, 2014},
pages = {4378--4381},
publisher = {{IEEE}},
year = {2014},
url = {https://doi.org/10.1109/IGARSS.2014.6947460},
doi = {10.1109/IGARSS.2014.6947460},
timestamp = {Wed, 16 Oct 2019 14:14:53 +0200},
biburl = {https://dblp.org/rec/conf/igarss/Chen14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/Zola14,
author = {Jaroslaw Zola},
title = {Constructing Similarity Graphs from Large-Scale Biological Sequence
Collections},
booktitle = {2014 {IEEE} International Parallel {\&} Distributed Processing
Symposium Workshops, Phoenix, AZ, USA, May 19-23, 2014},
pages = {500--507},
publisher = {{IEEE} Computer Society},
year = {2014},
url = {https://doi.org/10.1109/IPDPSW.2014.63},
doi = {10.1109/IPDPSW.2014.63},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ipps/Zola14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/otm/DongWH014,
author = {Zihe Dong and
Lijie Wen and
Haowei Huang and
Jianmin Wang},
editor = {Robert Meersman and
Herv{\'{e}} Panetto and
Tharam S. Dillon and
Michele Missikoff and
Lin Liu and
Oscar Pastor and
Alfredo Cuzzocrea and
Timos K. Sellis},
title = {{CFS:} {A} Behavioral Similarity Algorithm for Process Models Based
on Complete Firing Sequences},
booktitle = {On the Move to Meaningful Internet Systems: {OTM} 2014 Conferences
- Confederated International Conferences: CoopIS, and {ODBASE} 2014,
Amantea, Italy, October 27-31, 2014, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8841},
pages = {202--219},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-662-45563-0\_12},
doi = {10.1007/978-3-662-45563-0\_12},
timestamp = {Mon, 18 Jan 2021 08:56:44 +0100},
biburl = {https://dblp.org/rec/conf/otm/DongWH014.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/stringology/Grabowski14,
author = {Szymon Grabowski},
editor = {Jan Holub and
Jan Zd{\'{a}}rek},
title = {New Tabulation and Sparse Dynamic Programming Based Techniques for
Sequence Similarity Problems},
booktitle = {Proceedings of the Prague Stringology Conference 2014, Prague, Czech
Republic, September 1-3, 2014},
pages = {202--211},
publisher = {Department of Theoretical Computer Science, Faculty of Information
Technology, Czech Technical University in Prague},
year = {2014},
url = {http://www.stringology.org/event/2014/p19.html},
timestamp = {Wed, 10 Feb 2021 08:42:22 +0100},
biburl = {https://dblp.org/rec/conf/stringology/Grabowski14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/visapp/RatsameeMKHKA14,
author = {Photchara Ratsamee and
Yasushi Mae and
Masaru Kojima and
Mitsuhiro Horade and
Kazuto Kamiyama and
Tatsuo Arai},
editor = {Sebastiano Battiato and
Jos{\'{e}} Braz},
title = {Event Clustering of Lifelog Image Sequence using Emotional and Image
Similarity Features},
booktitle = {{VISAPP} 2014 - Proceedings of the 9th International Conference on
Computer Vision Theory and Applications, Volume 1, Lisbon, Portugal,
5-8 January, 2014},
pages = {618--624},
publisher = {SciTePress},
year = {2014},
url = {https://doi.org/10.5220/0004741206180624},
doi = {10.5220/0004741206180624},
timestamp = {Wed, 24 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/visapp/RatsameeMKHKA14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wbir/HallackCGS14,
author = {Andre Hallack and
Michael A. Chappell and
Mark J. Gooding and
Julia A. Schnabel},
editor = {S{\'{e}}bastien Ourselin and
Marc Modat},
title = {A New Similarity Metric for Groupwise Registration of Variable Flip
Angle Sequences for Improved {T} 10 Estimation in {DCE-MRI}},
booktitle = {Biomedical Image Registration - 6th International Workshop, {WBIR}
2014, London, UK, July 7-8, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8545},
pages = {154--163},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08554-8\_16},
doi = {10.1007/978-3-319-08554-8\_16},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wbir/HallackCGS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wise/LuZG14,
author = {Hongwei Lu and
Qian Zhao and
Zaobin Gan},
editor = {Boualem Benatallah and
Azer Bestavros and
Yannis Manolopoulos and
Athena Vakali and
Yanchun Zhang},
title = {A Community Detection Algorithm Based on the Similarity Sequence},
booktitle = {Web Information Systems Engineering - {WISE} 2014 - 15th International
Conference, Thessaloniki, Greece, October 12-14, 2014, Proceedings,
Part {I}},
series = {Lecture Notes in Computer Science},
volume = {8786},
pages = {63--78},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-11749-2\_5},
doi = {10.1007/978-3-319-11749-2\_5},
timestamp = {Sun, 02 Jun 2019 21:10:50 +0200},
biburl = {https://dblp.org/rec/conf/wise/LuZG14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JachietPBLB13,
author = {Pierre{-}Alain Jachiet and
Romain Pogorelcnik and
Anne Berry and
Philippe Lopez and
Eric Bapteste},
title = {MosaicFinder: identification of fused gene families in sequence similarity
networks},
journal = {Bioinform.},
volume = {29},
number = {7},
pages = {837--844},
year = {2013},
url = {https://doi.org/10.1093/bioinformatics/btt049},
doi = {10.1093/BIOINFORMATICS/BTT049},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/JachietPBLB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PorterB13,
author = {Michael S. Porter and
Robert G. Beiko},
title = {{SPANNER:} taxonomic assignment of sequences using pyramid matching
of similarity profiles},
journal = {Bioinform.},
volume = {29},
number = {15},
pages = {1858--1864},
year = {2013},
url = {https://doi.org/10.1093/bioinformatics/btt313},
doi = {10.1093/BIOINFORMATICS/BTT313},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/PorterB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BarghashH13,
author = {Ahmad Barghash and
Volkhard Helms},
title = {Transferring functional annotations of membrane transporters on the
basis of sequence similarity and sequence motifs},
journal = {{BMC} Bioinform.},
volume = {14},
pages = {343},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-343},
doi = {10.1186/1471-2105-14-343},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BarghashH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isci/GrecoT13,
author = {Gianluigi Greco and
Giorgio Terracina},
title = {Frequency-based similarity for parameterized sequences: Formal framework,
algorithms, and applications},
journal = {Inf. Sci.},
volume = {237},
pages = {176--195},
year = {2013},
url = {https://doi.org/10.1016/j.ins.2013.03.016},
doi = {10.1016/J.INS.2013.03.016},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/isci/GrecoT13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mta/LeeLP13,
author = {Minho Lee and
Kyogu Lee and
Jaeheung Park},
title = {Music similarity-based approach to generating dance motion sequence},
journal = {Multim. Tools Appl.},
volume = {62},
number = {3},
pages = {895--912},
year = {2013},
url = {https://doi.org/10.1007/s11042-012-1288-5},
doi = {10.1007/S11042-012-1288-5},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/mta/LeeLP13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/paa/FotopoulouLEF13,
author = {Fotini Fotopoulou and
Nikolaos A. Laskaris and
George Economou and
Spiros Fotopoulos},
title = {Advanced leaf image retrieval via Multidimensional Embedding Sequence
Similarity {(MESS)} method},
journal = {Pattern Anal. Appl.},
volume = {16},
number = {3},
pages = {381--392},
year = {2013},
url = {https://doi.org/10.1007/s10044-011-0254-6},
doi = {10.1007/S10044-011-0254-6},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/paa/FotopoulouLEF13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/ChenLW13,
author = {Qingfeng Chen and
Wei Lan and
Jianxin Wang},
title = {Mining Featured Patterns of MiRNA Interaction Based on Sequence and
Structure Similarity},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {10},
number = {2},
pages = {415--422},
year = {2013},
url = {https://doi.org/10.1109/TCBB.2013.5},
doi = {10.1109/TCBB.2013.5},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/ChenLW13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmm/LeeSKL13,
author = {Soon{-}Young Lee and
Jae{-}Young Sim and
Chang{-}Su Kim and
Sang{-}Uk Lee},
title = {Correspondence Matching of Multi-View Video Sequences Using Mutual
Information Based Similarity Measure},
journal = {{IEEE} Trans. Multim.},
volume = {15},
number = {8},
pages = {1719--1731},
year = {2013},
url = {https://doi.org/10.1109/TMM.2013.2271747},
doi = {10.1109/TMM.2013.2271747},
timestamp = {Thu, 13 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tmm/LeeSKL13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apweb/ShangHZS13,
author = {Tianfeng Shang and
Qing He and
Fuzhen Zhuang and
Zhongzhi Shi},
editor = {Yoshiharu Ishikawa and
Jianzhong Li and
Wei Wang and
Rui Zhang and
Wenjie Zhang},
title = {A New Similarity Measure Based on Preference Sequences for Collaborative
Filtering},
booktitle = {Web Technologies and Applications - 15th Asia-Pacific Web Conference,
APWeb 2013, Sydney, Australia, April 4-6, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7808},
pages = {384--391},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-37401-2\_39},
doi = {10.1007/978-3-642-37401-2\_39},
timestamp = {Mon, 28 Aug 2023 21:17:33 +0200},
biburl = {https://dblp.org/rec/conf/apweb/ShangHZS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Techa-angkoonS13,
author = {Prapaporn Techa{-}angkoon and
Yanni Sun},
editor = {Jing Gao},
title = {glu-RNA: aliGn highLy strUctured ncRNAs using only sequence similarity},
booktitle = {{ACM} Conference on Bioinformatics, Computational Biology and Biomedical
Informatics. {ACM-BCB} 2013, Washington, DC, USA, September 22-25,
2013},
pages = {508},
publisher = {{ACM}},
year = {2013},
url = {https://doi.org/10.1145/2506583.2506617},
doi = {10.1145/2506583.2506617},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Techa-angkoonS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eurocast/MoserEKS13,
author = {Bernhard Moser and
Florian Eibensteiner and
J{\"{u}}rgen Kogler and
Gernot St{\"{u}}bl},
editor = {Roberto Moreno{-}D{\'{\i}}az and
Franz Pichler and
Alexis Quesada{-}Arencibia},
title = {On the Relevance of Discrepancy Norm for Similarity-Based Clustering
of Delta-Event Sequences},
booktitle = {Computer Aided Systems Theory - {EUROCAST} 2013 - 14th International
Conference, Las Palmas de Gran Canaria, Spain, February 10-15, 2013,
Revised Selected Papers, Part {I}},
series = {Lecture Notes in Computer Science},
volume = {8111},
pages = {84--91},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-53856-8\_11},
doi = {10.1007/978-3-642-53856-8\_11},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/eurocast/MoserEKS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ic3/GuptaNM13,
author = {Manoj Kumar Gupta and
Rajdeep Niyogi and
Manoj Misra},
editor = {Manish Parashar and
Albert Y. Zomaya and
Jianer Chen and
Jiannong Cao and
Pascal Bouvry and
Sushil K. Prasad},
title = {A framework for alignment-free methods to perform similarity analysis
of biological sequence},
booktitle = {Sixth International Conference on Contemporary Computing, {IC3} 2013,
Noida, India, August 8-10, 2013},
pages = {337--342},
publisher = {{IEEE}},
year = {2013},
url = {https://doi.org/10.1109/IC3.2013.6612216},
doi = {10.1109/IC3.2013.6612216},
timestamp = {Tue, 14 Apr 2020 13:23:10 +0200},
biburl = {https://dblp.org/rec/conf/ic3/GuptaNM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icacci/HamidiNS13,
author = {Sarvenaz Hamidi and
Mahmoud Naghibzadeh and
Javad Sadri},
title = {Protein multiple sequence alignment based on secondary structure similarity},
booktitle = {International Conference on Advances in Computing, Communications
and Informatics, {ICACCI} 2013, Mysore, India, August 22-25, 2013},
pages = {1224--1229},
publisher = {{IEEE}},
year = {2013},
url = {https://doi.org/10.1109/ICACCI.2013.6637352},
doi = {10.1109/ICACCI.2013.6637352},
timestamp = {Wed, 16 Oct 2019 14:14:51 +0200},
biburl = {https://dblp.org/rec/conf/icacci/HamidiNS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icassp/ZhaoMDL13,
author = {Xuan Zhao and
Shun Miao and
Liang Du and
Rui Liao},
title = {Robust 2-D/3-D registration of {CT} volumes with contrast-enhanced
X-ray sequences in electrophysiology based on a weighted similarity
measure and sequential subspace optimization},
booktitle = {{IEEE} International Conference on Acoustics, Speech and Signal Processing,
{ICASSP} 2013, Vancouver, BC, Canada, May 26-31, 2013},
pages = {934--938},
publisher = {{IEEE}},
year = {2013},
url = {https://doi.org/10.1109/ICASSP.2013.6637786},
doi = {10.1109/ICASSP.2013.6637786},
timestamp = {Wed, 16 Oct 2019 14:14:52 +0200},
biburl = {https://dblp.org/rec/conf/icassp/ZhaoMDL13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ijcnn/KoprinskaRLM13,
author = {Irena Koprinska and
Mashud Rana and
Alicia Troncoso Lora and
Francisco Mart{\'{\i}}nez{-}{\'{A}}lvarez},
title = {Combining pattern sequence similarity with neural networks for forecasting
electricity demand time series},
booktitle = {The 2013 International Joint Conference on Neural Networks, {IJCNN}
2013, Dallas, TX, USA, August 4-9, 2013},
pages = {1--8},
publisher = {{IEEE}},
year = {2013},
url = {https://doi.org/10.1109/IJCNN.2013.6706838},
doi = {10.1109/IJCNN.2013.6706838},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ijcnn/KoprinskaRLM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ip-c/Okarma13,
author = {Krzysztof Okarma},
editor = {Ryszard S. Choras},
title = {Adaptation of the Combined Image Similarity Index for Video Sequences},
booktitle = {Image Processing and Communications Challenges 5 - 5th International
Conference, IP{\&}C 2013, Bydgoszcz, Poland, September 2013, Proceedings},
series = {Advances in Intelligent Systems and Computing},
volume = {233},
pages = {81--89},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-319-01622-1\_10},
doi = {10.1007/978-3-319-01622-1\_10},
timestamp = {Thu, 01 Feb 2018 10:20:04 +0100},
biburl = {https://dblp.org/rec/conf/ip-c/Okarma13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/itat/VisnovskaVB13,
author = {Martina Visnovsk{\'{a}} and
Tom{\'{a}}s Vinar and
Brona Brejov{\'{a}}},
editor = {Tom{\'{a}}s Vinar},
title = {{DNA} Sequence Segmentation Based on Local Similarity},
booktitle = {Proceedings of the Conference on Information Technologies - Applications
and Theory, Donovaly, Slovakia, September 11-15, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1003},
pages = {36--43},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1003/36.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:21 +0100},
biburl = {https://dblp.org/rec/conf/itat/VisnovskaVB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/otm/PeriakaruppanN13,
author = {Ramanathan Periakaruppan and
Rethinaswamy Nadarajan},
editor = {Yan Tang Demey and
Herv{\'{e}} Panetto},
title = {A Prufer Sequence Based Approach to Measure Structural Similarity
of {XML} Documents},
booktitle = {On the Move to Meaningful Internet Systems: {OTM} 2013 Workshops -
Confederated International Workshops: {OTM} Academy, {OTM} Industry
Case Studies Program, ACM, EI2N, ISDE, META4eS, ORM, SeDeS, SINCOM,
SMS, and {SOMOCO} 2013, Graz, Austria, September 9 - 13, 2013, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8186},
pages = {639--648},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-41033-8\_81},
doi = {10.1007/978-3-642-41033-8\_81},
timestamp = {Tue, 21 Mar 2023 21:01:50 +0100},
biburl = {https://dblp.org/rec/conf/otm/PeriakaruppanN13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pakdd/ZhangC13,
author = {Yuqi Zhang and
Jian Cao},
editor = {Longbing Cao and
Hiroshi Motoda and
Jaideep Srivastava and
Ee{-}Peng Lim and
Irwin King and
Philip S. Yu and
Wolfgang Nejdl and
Guandong Xu and
Gang Li and
Ya Zhang},
title = {Personalized Recommendation Based on Behavior Sequence Similarity
Measures},
booktitle = {Behavior and Social Computing, International Workshop on Behavior
and Social Informatics, {BSI} 2013, Gold Coast, QLD, Australia, April
14-17, 2013 and International Workshop on Behavior and Social Informatics
and Computing, {BSIC} 2013, Beijing, China, August 3-9, 2013, Revised
Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {8178},
pages = {165--177},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-319-04048-6\_15},
doi = {10.1007/978-3-319-04048-6\_15},
timestamp = {Sat, 09 Apr 2022 12:47:23 +0200},
biburl = {https://dblp.org/rec/conf/pakdd/ZhangC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/siu/BasaranCA13,
author = {Dogac Basaran and
Ali Taylan Cemgil and
Emin Anarim},
title = {Model based audio sequence alignment based on deterministic similarity
methods},
booktitle = {21st Signal Processing and Communications Applications Conference,
{SIU} 2013, Haspolat, Turkey, April 24-26, 2013},
pages = {1--4},
publisher = {{IEEE}},
year = {2013},
url = {https://doi.org/10.1109/SIU.2013.6531331},
doi = {10.1109/SIU.2013.6531331},
timestamp = {Wed, 16 Oct 2019 14:14:55 +0200},
biburl = {https://dblp.org/rec/conf/siu/BasaranCA13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/Grabowski13,
author = {Szymon Grabowski},
title = {New tabulation and sparse dynamic programming based techniques for
sequence similarity problems},
journal = {CoRR},
volume = {abs/1312.2217},
year = {2013},
url = {http://arxiv.org/abs/1312.2217},
eprinttype = {arXiv},
eprint = {1312.2217},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/Grabowski13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/SunarsoVL13,
author = {Freddie Sunarso and
Srikumar Venugopal and
Federico M. Lauro},
title = {Scalable Protein Sequence Similarity Search using Locality-Sensitive
Hashing and MapReduce},
journal = {CoRR},
volume = {abs/1310.0883},
year = {2013},
url = {http://arxiv.org/abs/1310.0883},
eprinttype = {arXiv},
eprint = {1310.0883},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/SunarsoVL13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/Udagawa13,
author = {Yoshihisa Udagawa},
title = {Source Code Retrieval Using Sequence Based Similarity},
journal = {CoRR},
volume = {abs/1308.3554},
year = {2013},
url = {http://arxiv.org/abs/1308.3554},
eprinttype = {arXiv},
eprint = {1308.3554},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/Udagawa13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/VishwanathLSKSVIP13,
author = {R. H. Vishwanath and
S. Leena and
K. C. Srikantaiah and
K. Shreekrishna Kumar and
P. Deepa Shenoy and
K. R. Venugopal and
S. S. Iyengar and
Lalit M. Patnaik},
title = {Forecasting Stock Time-Series using Data Approximation and Pattern
Sequence Similarity},
journal = {CoRR},
volume = {abs/1309.2517},
year = {2013},
url = {http://arxiv.org/abs/1309.2517},
eprinttype = {arXiv},
eprint = {1309.2517},
timestamp = {Mon, 23 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/VishwanathLSKSVIP13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@phdthesis{DBLP:phd/hal/Gillot12,
author = {Christian Gillot},
title = {Mod{\`{e}}les de langue exploitant la similarit{\'{e}} structurelle
entre s{\'{e}}quences pour la reconnaissance de la parole. (Language
models exploiting the structural similarity between sequences for
automatic speech recognition)},
school = {University of Lorraine, Nancy, France},
year = {2012},
url = {https://tel.archives-ouvertes.fr/tel-01258153},
timestamp = {Tue, 21 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/phd/hal/Gillot12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GokeSLV12,
author = {Jonathan G{\"{o}}ke and
Marcel H. Schulz and
Julia Lasserre and
Martin Vingron},
title = {Estimation of pairwise sequence similarity of mammalian enhancers
with word neighbourhood counts},
journal = {Bioinform.},
volume = {28},
number = {5},
pages = {656--663},
year = {2012},
url = {https://doi.org/10.1093/bioinformatics/bts028},
doi = {10.1093/BIOINFORMATICS/BTS028},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/GokeSLV12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BramucciPBP12,
author = {Emanuele Bramucci and
Alessandro Paiardini and
Francesco Bossa and
Stefano Pascarella},
title = {PyMod: sequence similarity searches, multiple sequence-structure alignments,
and homology modeling within PyMOL},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S2},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S2},
doi = {10.1186/1471-2105-13-S4-S2},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/BramucciPBP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ZhangL12,
author = {Melvin Zhang and
Hon Wai Leong},
title = {{BBH-LS:} an algorithm for computing positional homologs using sequence
and gene context similarity},
journal = {{BMC} Syst. Biol.},
volume = {6},
number = {{S-1}},
pages = {S22},
year = {2012},
url = {https://doi.org/10.1186/1752-0509-6-S1-S22},
doi = {10.1186/1752-0509-6-S1-S22},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/ZhangL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cee/LakehalFT12,
author = {Mohamed Reda Lakehal and
Youcef Ferdi and
Abdelmalik Taleb{-}Ahmed},
title = {On the self-similarity of 1/f\({}^{\mbox{{\(\beta\)}}}\) sequences
synthesized by recursive filtering},
journal = {Comput. Electr. Eng.},
volume = {38},
number = {2},
pages = {282--293},
year = {2012},
url = {https://doi.org/10.1016/j.compeleceng.2011.12.005},
doi = {10.1016/J.COMPELECENG.2011.12.005},
timestamp = {Wed, 19 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/cee/LakehalFT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/iwc/WongsuphasawatPTS12,
author = {Krist Wongsuphasawat and
Catherine Plaisant and
Meirav Taieb{-}Maimon and
Ben Shneiderman},
title = {Querying event sequences by exact match or similarity search: Design
and empirical evaluation},
journal = {Interact. Comput.},
volume = {24},
number = {2},
pages = {55--68},
year = {2012},
url = {https://doi.org/10.1016/j.intcom.2012.01.003},
doi = {10.1016/J.INTCOM.2012.01.003},
timestamp = {Fri, 13 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/iwc/WongsuphasawatPTS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/pami/Rodriguez-SerranoP12,
author = {Jos{\'{e}} A. Rodr{\'{\i}}guez{-}Serrano and
Florent Perronnin},
title = {A Model-Based Sequence Similarity with Application to Handwritten
Word Spotting},
journal = {{IEEE} Trans. Pattern Anal. Mach. Intell.},
volume = {34},
number = {11},
pages = {2108--2120},
year = {2012},
url = {https://doi.org/10.1109/TPAMI.2012.25},
doi = {10.1109/TPAMI.2012.25},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/pami/Rodriguez-SerranoP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tkde/LinWM12,
author = {Zhiwei Lin and
Hui Wang and
Sally I. McClean},
title = {A Multidimensional Sequence Approach to Measuring Tree Similarity},
journal = {{IEEE} Trans. Knowl. Data Eng.},
volume = {24},
number = {2},
pages = {197--208},
year = {2012},
url = {https://doi.org/10.1109/TKDE.2010.239},
doi = {10.1109/TKDE.2010.239},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tkde/LinWM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/MoritzBM12,
author = {Ruby L. V. Moritz and
Matthias Bernt and
Martin Middendorf},
title = {Annotation guided local similarity search in multiple sequences and
its application to mitochondrial genomes},
booktitle = {12th {IEEE} International Conference on Bioinformatics {\&} Bioengineering,
{BIBE} 2012, Larnaca, Cyprus, November 11-13, 2012},
pages = {157--162},
publisher = {{IEEE} Computer Society},
year = {2012},
url = {https://doi.org/10.1109/BIBE.2012.6399666},
doi = {10.1109/BIBE.2012.6399666},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/MoritzBM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/HajihashemiP12,
author = {Zahra Hajihashemi and
Mihail Popescu},
title = {Predicting health patterns using sensor sequence similarity and {NLP}},
booktitle = {2012 {IEEE} International Conference on Bioinformatics and Biomedicine
Workshops, {BIBMW} 2012, Philadelphia, USA, October 4-7, 2012},
pages = {948--950},
publisher = {{IEEE} Computer Society},
year = {2012},
url = {https://doi.org/10.1109/BIBMW.2012.6470278},
doi = {10.1109/BIBMW.2012.6470278},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/HajihashemiP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bmei/HuZLC12,
author = {Jun Hu and
Hongxia Zhao and
Xueyou Liang and
Dan Chen},
editor = {Tianqi Zhang},
title = {The analysis of similarity for promoter sequence structures in yeast
genes},
booktitle = {5th International Conference on BioMedical Engineering and Informatics,
{BMEI} 2012, Chongqing, China, October 16-18, 2012},
pages = {919--922},
publisher = {{IEEE}},
year = {2012},
url = {https://doi.org/10.1109/BMEI.2012.6513091},
doi = {10.1109/BMEI.2012.6513091},
timestamp = {Wed, 16 Oct 2019 14:14:50 +0200},
biburl = {https://dblp.org/rec/conf/bmei/HuZLC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/his/DehshibiSA12,
author = {Mohammad Mahdi Dehshibi and
Jamshid Shanbehzadeh and
Meysam Alavi},
title = {Facial family similarity recognition using Local Gabor Binary Pattern
Histogram Sequence},
booktitle = {12th International Conference on Hybrid Intelligent Systems, {HIS}
2012, Pune, India, December 4-7, 2012},
pages = {219--224},
publisher = {{IEEE}},
year = {2012},
url = {https://doi.org/10.1109/HIS.2012.6421337},
doi = {10.1109/HIS.2012.6421337},
timestamp = {Wed, 16 Oct 2019 14:14:55 +0200},
biburl = {https://dblp.org/rec/conf/his/DehshibiSA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccbr/Gundersen12,
author = {Odd Erik Gundersen},
editor = {Bel{\'{e}}n D{\'{\i}}az{-}Agudo and
Ian Watson},
title = {Toward Measuring the Similarity of Complex Event Sequences in Real-Time},
booktitle = {Case-Based Reasoning Research and Development - 20th International
Conference, {ICCBR} 2012, Lyon, France, September 3-6, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7466},
pages = {107--121},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-32986-9\_10},
doi = {10.1007/978-3-642-32986-9\_10},
timestamp = {Sat, 05 Sep 2020 18:01:25 +0200},
biburl = {https://dblp.org/rec/conf/iccbr/Gundersen12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icpram/EmmsF12,
author = {Martin Emms and
Hector{-}Hugo Franco{-}Penya},
editor = {Pedro Latorre Carmona and
J. Salvador S{\'{a}}nchez and
Ana L. N. Fred},
title = {On Order Equivalences between Distance and Similarity Measures on
Sequences and Trees},
booktitle = {{ICPRAM} 2012 - Proceedings of the 1st International Conference on
Pattern Recognition Applications and Methods, Volume 1, Vilamoura,
Algarve, Portugal, 6-8 February, 2012},
pages = {15--24},
publisher = {SciTePress},
year = {2012},
timestamp = {Thu, 26 Jul 2018 12:47:50 +0200},
biburl = {https://dblp.org/rec/conf/icpram/EmmsF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isb/KongNHDY12,
author = {Fen Kong and
Xu{-}Ying Nan and
Ping{-}an He and
Qi Dai and
Yu{-}Hua Yao},
title = {A sequence-segmented method applied to the similarity analysis of
proteins},
booktitle = {6th {IEEE} International Conference on Systems Biology, {ISB} 2012,
Xian, China, August 18-20, 2012},
pages = {321--326},
publisher = {{IEEE}},
year = {2012},
url = {https://doi.org/10.1109/ISB.2012.6314157},
doi = {10.1109/ISB.2012.6314157},
timestamp = {Wed, 16 Oct 2019 14:14:55 +0200},
biburl = {https://dblp.org/rec/conf/isb/KongNHDY12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kdd/Kuksa12,
author = {Pavel P. Kuksa},
editor = {Tamer Kahveci and
Saeed Salem and
Mehmet Koyut{\"{u}}rk and
Jake Yue Chen and
Mohammed J. Zaki},
title = {2D similarity kernels for biological sequence classification},
booktitle = {Proceedings of the 11th International Workshop on Data Mining in Bioinformatics,
{BIOKDD} 2012, Beijing, China, August 12, 2012},
pages = {15--20},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2350176.2350179},
doi = {10.1145/2350176.2350179},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/kdd/Kuksa12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sdm/KuksaKP12,
author = {Pavel P. Kuksa and
Imdadullah Khan and
Vladimir Pavlovic},
title = {Generalized Similarity Kernels for Efficient Sequence Classification},
booktitle = {Proceedings of the Twelfth {SIAM} International Conference on Data
Mining, Anaheim, California, USA, April 26-28, 2012},
pages = {873--882},
publisher = {{SIAM} / Omnipress},
year = {2012},
url = {https://doi.org/10.1137/1.9781611972825.75},
doi = {10.1137/1.9781611972825.75},
timestamp = {Tue, 11 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/sdm/KuksaKP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/HendriksDEDK12,
author = {Dimitri Hendriks and
Frits Dannenberg and
J{\"{o}}rg Endrullis and
Mark Dow and
Jan Willem Klop},
title = {Arithmetic Self-Similarity of Infinite Sequences},
journal = {CoRR},
volume = {abs/1201.3786},
year = {2012},
url = {http://arxiv.org/abs/1201.3786},
eprinttype = {arXiv},
eprint = {1201.3786},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/HendriksDEDK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/appml/BaiZZ11,
author = {Fenglan Bai and
Jihong Zhang and
Junsheng Zheng},
title = {Similarity analysis of {DNA} sequences based on the {EMD} method},
journal = {Appl. Math. Lett.},
volume = {24},
number = {2},
pages = {232--237},
year = {2011},
url = {https://doi.org/10.1016/j.aml.2010.09.010},
doi = {10.1016/J.AML.2010.09.010},
timestamp = {Fri, 26 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/appml/BaiZZ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/appml/ZhangWBZ11,
author = {Jihong Zhang and
Renhong Wang and
Fenglan Bai and
Junsheng Zheng},
title = {A Quasi-MQ {EMD} method for similarity analysis of {DNA} sequences},
journal = {Appl. Math. Lett.},
volume = {24},
number = {12},
pages = {2052--2058},
year = {2011},
url = {https://doi.org/10.1016/j.aml.2011.05.041},
doi = {10.1016/J.AML.2011.05.041},
timestamp = {Mon, 09 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/appml/ZhangWBZ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MielePD11,
author = {Vincent Miele and
Simon Penel and
Laurent Duret},
title = {Ultra-fast sequence clustering from similarity networks with SiLiX},
journal = {{BMC} Bioinform.},
volume = {12},
pages = {116},
year = {2011},
url = {https://doi.org/10.1186/1471-2105-12-116},
doi = {10.1186/1471-2105-12-116},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MielePD11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/LiMZWZ11,
author = {Chun Li and
Hong Ma and
Yang Zhou and
Xiaolei Wang and
Xiaoqi Zheng},
title = {Similarity analysis of {DNA} sequences based on the weighted pseudo-entropy},
journal = {J. Comput. Chem.},
volume = {32},
number = {4},
pages = {675--680},
year = {2011},
url = {https://doi.org/10.1002/jcc.21656},
doi = {10.1002/JCC.21656},
timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcc/LiMZWZ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jips/PandiKM11,
author = {Mohammad H. Pandi and
Omid Kashefi and
Behrouz Minaei},
title = {A Novel Similarity Measure for Sequence Data},
journal = {J. Inf. Process. Syst.},
volume = {7},
number = {3},
pages = {413--424},
year = {2011},
url = {https://doi.org/10.3745/JIPS.2011.7.3.413},
doi = {10.3745/JIPS.2011.7.3.413},
timestamp = {Tue, 16 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jips/PandiKM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/FinnCE11,
author = {Robert D. Finn and
Jody Clements and
Sean R. Eddy},
title = {{HMMER} web server: interactive sequence similarity searching},
journal = {Nucleic Acids Res.},
volume = {39},
number = {Web-Server-Issue},
pages = {29--37},
year = {2011},
url = {https://doi.org/10.1093/nar/gkr367},
doi = {10.1093/NAR/GKR367},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/FinnCE11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/prl/DuttaKC11,
author = {Ambar Dutta and
Avijit Kar and
B. N. Chatterji},
title = {A new approach to corner matching from image sequence using fuzzy
similarity index},
journal = {Pattern Recognit. Lett.},
volume = {32},
number = {5},
pages = {712--720},
year = {2011},
url = {https://doi.org/10.1016/j.patrec.2010.12.006},
doi = {10.1016/J.PATREC.2010.12.006},
timestamp = {Sat, 22 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/prl/DuttaKC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tkde/AlvarezLRA11,
author = {Francisco Mart{\'{\i}}nez{-}{\'{A}}lvarez and
Alicia Troncoso Lora and
Jos{\'{e}} C. Riquelme and
Jes{\'{u}}s S. Aguilar{-}Ruiz},
title = {Energy Time Series Forecasting Based on Pattern Sequence Similarity},
journal = {{IEEE} Trans. Knowl. Data Eng.},
volume = {23},
number = {8},
pages = {1230--1243},
year = {2011},
url = {https://doi.org/10.1109/TKDE.2010.227},
doi = {10.1109/TKDE.2010.227},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tkde/AlvarezLRA11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bicob/JacksonH11,
author = {James D. Jackson and
Philip J. Hatcher},
editor = {Hisham Al{-}Mubaid},
title = {Efficient Parallel Execution of Sequence Similarity Analysis Via Dynamic
Load Balancing},
booktitle = {Proceedings of the {ISCA} 3rd International Conference on Bioinformatics
and Computational Biology, BICoB-2011, March 23-25, 2011, Holiday
Inn Downtown-Superdome, New Orleans, Louisiana, {USA}},
pages = {219--224},
publisher = {{ISCA}},
year = {2011},
timestamp = {Mon, 14 Nov 2011 12:10:34 +0100},
biburl = {https://dblp.org/rec/conf/bicob/JacksonH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ccp/Ziv11,
author = {Jacob Ziv},
title = {An Axiomatic Approach to the Notion of Similarity of Individual Sequences
and Their Classification},
booktitle = {First International Conference on Data Compression, Communications
and Processing, {CCP} 2011, Palinuro, Cilento Coast, Italy, June 21-24,
2011},
pages = {3--7},
publisher = {{IEEE} Computer Society},
year = {2011},
url = {https://doi.org/10.1109/CCP.2011.29},
doi = {10.1109/CCP.2011.29},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ccp/Ziv11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dcc/ApostolicoC11,
author = {Alberto Apostolico and
Fabio Cunial},
editor = {James A. Storer and
Michael W. Marcellin},
title = {Sequence Similarity by Gapped {LZW}},
booktitle = {2011 Data Compression Conference {(DCC} 2011), 29-31 March 2011, Snowbird,
UT, {USA}},
pages = {343--352},
publisher = {{IEEE} Computer Society},
year = {2011},
url = {https://doi.org/10.1109/DCC.2011.41},
doi = {10.1109/DCC.2011.41},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/dcc/ApostolicoC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/europar/RheinlanderL11,
author = {Astrid Rheinl{\"{a}}nder and
Ulf Leser},
editor = {Michael Alexander and
Pasqua D'Ambra and
Adam Belloum and
George Bosilca and
Mario Cannataro and
Marco Danelutto and
Beniamino Di Martino and
Michael Gerndt and
Emmanuel Jeannot and
Raymond Namyst and
Jean Roman and
Stephen L. Scott and
Jesper Larsson Tr{\"{a}}ff and
Geoffroy Vall{\'{e}}e and
Josef Weidendorfer},
title = {Scalable Sequence Similarity Search and Join in Main Memory on Multi-cores},
booktitle = {Euro-Par 2011: Parallel Processing Workshops - CCPI, CGWS, HeteroPar,
HiBB, HPCVirt, HPPC, HPSS, MDGS, ProPer, Resilience, UCHPC, VHPC,
Bordeaux, France, August 29 - September 2, 2011, Revised Selected
Papers, Part {II}},
series = {Lecture Notes in Computer Science},
volume = {7156},
pages = {13--22},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-29740-3\_3},
doi = {10.1007/978-3-642-29740-3\_3},
timestamp = {Wed, 19 Feb 2020 14:52:57 +0100},
biburl = {https://dblp.org/rec/conf/europar/RheinlanderL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ica3pp/PawlowskiMKM11,
author = {Robert Pawlowski and
Bozena Malysiak{-}Mrozek and
Stanislaw Kozielski and
Dariusz Mrozek},
editor = {Yang Xiang and
Alfredo Cuzzocrea and
Michael Hobbs and
Wanlei Zhou},
title = {Fast and Accurate Similarity Searching of Biopolymer Sequences with
{GPU} and {CUDA}},
booktitle = {Algorithms and Architectures for Parallel Processing - 11th International
Conference, ICA3PP, Melbourne, Australia, October 24-26, 2011, Proceedings,
Part {I}},
series = {Lecture Notes in Computer Science},
volume = {7016},
pages = {230--243},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-24650-0\_20},
doi = {10.1007/978-3-642-24650-0\_20},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ica3pp/PawlowskiMKM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icic/Yu11,
author = {Hong{-}Jie Yu},
editor = {De{-}Shuang Huang and
Yong Gan and
Prashan Premaratne and
Kyungsook Han},
title = {Similarity Analysis of {DNA} Sequences Based on Three 2-D Cumulative
Ratio Curves},
booktitle = {Bio-Inspired Computing and Applications - 7th International Conference
on Intelligent Computing, {ICIC} 2011, Zhengzhou,China, August 11-14.
2011, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {6840},
pages = {462--469},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-24553-4\_61},
doi = {10.1007/978-3-642-24553-4\_61},
timestamp = {Tue, 14 May 2019 10:00:53 +0200},
biburl = {https://dblp.org/rec/conf/icic/Yu11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icic/Yu11a,
author = {Hong{-}Jie Yu},
editor = {De{-}Shuang Huang and
Yong Gan and
Prashan Premaratne and
Kyungsook Han},
title = {Similarity Analysis of {DNA} Barcodes Sequences Based on Compressed
Feature Vectors},
booktitle = {Bio-Inspired Computing and Applications - 7th International Conference
on Intelligent Computing, {ICIC} 2011, Zhengzhou,China, August 11-14.
2011, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {6840},
pages = {470--477},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-24553-4\_62},
doi = {10.1007/978-3-642-24553-4\_62},
timestamp = {Tue, 23 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icic/Yu11a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pkdd/KostakisPH11,
author = {Orestis Kostakis and
Panagiotis Papapetrou and
Jaakko Hollm{\'{e}}n},
editor = {Dimitrios Gunopulos and
Thomas Hofmann and
Donato Malerba and
Michalis Vazirgiannis},
title = {{ARTEMIS:} Assessing the Similarity of Event-Interval Sequences},
booktitle = {Machine Learning and Knowledge Discovery in Databases - European Conference,
{ECML} {PKDD} 2011, Athens, Greece, September 5-9, 2011, Proceedings,
Part {II}},
series = {Lecture Notes in Computer Science},
volume = {6912},
pages = {229--244},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-23783-6\_15},
doi = {10.1007/978-3-642-23783-6\_15},
timestamp = {Tue, 14 May 2019 10:00:47 +0200},
biburl = {https://dblp.org/rec/conf/pkdd/KostakisPH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wirtschaftsinformatik/SchmidlWK11,
author = {J{\"{o}}rg Schmidl and
Holger Wittges and
Helmut Krcmar},
title = {Similarity Determination in Activity Sequences - {A} Supportive Framework},
booktitle = {10. Internationale Tagung Wirtschaftsinformatik, Z{\"{u}}rich,
16.-18. Februar 2011},
pages = {35},
year = {2011},
url = {http://aisel.aisnet.org/wi2011/35},
timestamp = {Mon, 27 Feb 2012 21:21:41 +0100},
biburl = {https://dblp.org/rec/conf/wirtschaftsinformatik/SchmidlWK11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1109-0094,
author = {Heba Afify and
Muhammad Islam and
Manal Abdel Wahed},
title = {{DNA} Lossless Differential Compression Algorithm based on Similarity
of Genomic Sequence Database},
journal = {CoRR},
volume = {abs/1109.0094},
year = {2011},
url = {http://arxiv.org/abs/1109.0094},
eprinttype = {arXiv},
eprint = {1109.0094},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1109-0094.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1102-5482,
title = {An Axiomatic Approach to the notion of Similarity of individual Sequences
and their Classification},
journal = {CoRR},
volume = {abs/1102.5482},
year = {2011},
note = {Withdrawn.},
url = {http://arxiv.org/abs/1102.5482},
eprinttype = {arXiv},
eprint = {1102.5482},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1102-5482.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Darzentas10,
author = {Nikos Darzentas},
title = {Circoletto: visualizing sequence similarity with Circos},
journal = {Bioinform.},
volume = {26},
number = {20},
pages = {2620--2621},
year = {2010},
url = {https://doi.org/10.1093/bioinformatics/btq484},
doi = {10.1093/BIOINFORMATICS/BTQ484},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/Darzentas10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GorronRBRBRT10,
author = {Eduardo Gorr{\'{o}}n and
Fausto Rodr{\'{\i}}guez and
Diana Bernal and
Luis Miguel Rodriguez{-}Rojas and
Adriana Bernal and
Silvia Restrepo and
Joe Tohme},
title = {A new method for designing degenerate primers and its use in the identification
of sequences in \emph{Brachiaria} showing similarity to apomixis-associated
genes},
journal = {Bioinform.},
volume = {26},
number = {16},
pages = {2053--2054},
year = {2010},
url = {https://doi.org/10.1093/bioinformatics/btq312},
doi = {10.1093/BIOINFORMATICS/BTQ312},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GorronRBRBRT10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WongLGHCK10,
author = {Gerard Wong and
Christopher Leckie and
Kylie L. Gorringe and
Izhak Haviv and
Ian G. Campbell and
Adam Kowalczyk},
title = {Exploiting sequence similarity to validate the sensitivity of {SNP}
arrays in detecting fine-scaled copy number variations},
journal = {Bioinform.},
volume = {26},
number = {8},
pages = {1007--1014},
year = {2010},
url = {https://doi.org/10.1093/bioinformatics/btq088},
doi = {10.1093/BIOINFORMATICS/BTQ088},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WongLGHCK10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijcv/HuangHS10,
author = {Peng Huang and
Adrian Hilton and
Jonathan Starck},
title = {Shape Similarity for 3D Video Sequences of People},
journal = {Int. J. Comput. Vis.},
volume = {89},
number = {2-3},
pages = {362--381},
year = {2010},
url = {https://doi.org/10.1007/s11263-010-0319-9},
doi = {10.1007/S11263-010-0319-9},
timestamp = {Fri, 19 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijcv/HuangHS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijnmc/WeiJL10,
author = {Dan Wei and
Qingshan Jiang and
Sheng Li},
title = {A New Approach for {DNA} Sequence Similarity Analysis based on Triplets
of Nucleic Acid Bases},
journal = {Int. J. Nanotechnol. Mol. Comput.},
volume = {2},
number = {4},
pages = {1--11},
year = {2010},
url = {https://doi.org/10.4018/978-1-60960-064-8.ch006},
doi = {10.4018/978-1-60960-064-8.CH006},
timestamp = {Tue, 26 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijnmc/WeiJL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijwmip/LeeP10,
author = {Sangjun Lee and
Jisook Park},
title = {Efficient Similarity Search for Multi-Dimensional Time Sequences},
journal = {Int. J. Wavelets Multiresolution Inf. Process.},
volume = {8},
number = {3},
pages = {343--357},
year = {2010},
url = {https://doi.org/10.1142/S0219691310003511},
doi = {10.1142/S0219691310003511},
timestamp = {Wed, 12 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijwmip/LeeP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/ValavanisSN10,
author = {Ioannis K. Valavanis and
George M. Spyrou and
Konstantina S. Nikita},
title = {A similarity network approach for the analysis and comparison of protein
sequence/structure sets},
journal = {J. Biomed. Informatics},
volume = {43},
number = {2},
pages = {257--267},
year = {2010},
url = {https://doi.org/10.1016/j.jbi.2010.01.005},
doi = {10.1016/J.JBI.2010.01.005},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/ValavanisSN10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/YaoDLNHZ10,
author = {Yu{-}Hua Yao and
Qi Dai and
Ling Li and
Xu{-}Ying Nan and
Ping{-}An He and
Yao{-}Zhou Zhang},
title = {Similarity/dissimilarity studies of protein sequences based on a new
2D graphical representation},
journal = {J. Comput. Chem.},
volume = {31},
number = {5},
pages = {1045--1052},
year = {2010},
url = {https://doi.org/10.1002/jcc.21391},
doi = {10.1002/JCC.21391},
timestamp = {Wed, 01 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcc/YaoDLNHZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/kais/KelilWJB10,
author = {Abdellali Kelil and
Shengrui Wang and
Qingshan Jiang and
Ryszard Brzezinski},
title = {A general measure of similarity for categorical sequences},
journal = {Knowl. Inf. Syst.},
volume = {24},
number = {2},
pages = {197--220},
year = {2010},
url = {https://doi.org/10.1007/s10115-009-0237-8},
doi = {10.1007/S10115-009-0237-8},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/kais/KelilWJB10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bic-ta/ZhangWZZ10,
author = {Zhujin Zhang and
Shuo Wang and
Xingyi Zhang and
Zheng Zhang},
title = {Similarity analysis of {DNA} sequences based on a compact representation},
booktitle = {Fifth International Conference on Bio-Inspired Computing: Theories
and Applications, {BIC-TA} 2010, University of Hunan, Liverpool Hope
University, Liverpool, United Kingdom / Changsha, China, September
8-10 and September 23-26, 2010},
pages = {1143--1146},
publisher = {{IEEE}},
year = {2010},
url = {https://doi.org/10.1109/BICTA.2010.5645092},
doi = {10.1109/BICTA.2010.5645092},
timestamp = {Tue, 26 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bic-ta/ZhangWZZ10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bic-ta/ZhangY10,
author = {Yusen Zhang and
Xiangtian Yu},
title = {Analysis of protein sequence similarity},
booktitle = {Fifth International Conference on Bio-Inspired Computing: Theories
and Applications, {BIC-TA} 2010, University of Hunan, Liverpool Hope
University, Liverpool, United Kingdom / Changsha, China, September
8-10 and September 23-26, 2010},
pages = {1255--1258},
publisher = {{IEEE}},
year = {2010},
url = {https://doi.org/10.1109/BICTA.2010.5645085},
doi = {10.1109/BICTA.2010.5645085},
timestamp = {Thu, 28 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bic-ta/ZhangY10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cmmr/HaasRHVW10,
author = {W. Bas de Haas and
Matthias Robine and
Pierre Hanna and
Remco C. Veltkamp and
Frans Wiering},
editor = {S{\o}lvi Ystad and
Mitsuko Aramaki and
Richard Kronland{-}Martinet and
Kristoffer Jensen},
title = {Comparing Approaches to the Similarity of Musical Chord Sequences},
booktitle = {Exploring Music Contents - 7th International Symposium, {CMMR} 2010,
M{\'{a}}laga, Spain, June 21-24, 2010. Revised Papers},
series = {Lecture Notes in Computer Science},
volume = {6684},
pages = {242--258},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-23126-1\_16},
doi = {10.1007/978-3-642-23126-1\_16},
timestamp = {Tue, 14 May 2019 10:00:48 +0200},
biburl = {https://dblp.org/rec/conf/cmmr/HaasRHVW10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hpdc/HigdonLK10,
author = {Roger Higdon and
Brenton Louie and
Eugene Kolker},
editor = {Salim Hariri and
Kate Keahey},
title = {Modeling sequence and function similarity between proteins for protein
functional annotation},
booktitle = {Proceedings of the 19th {ACM} International Symposium on High Performance
Distributed Computing, {HPDC} 2010, Chicago, Illinois, USA, June 21-25,
2010},
pages = {499--502},
publisher = {{ACM}},
year = {2010},
url = {https://doi.org/10.1145/1851476.1851548},
doi = {10.1145/1851476.1851548},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/hpdc/HigdonLK10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icdm/WangLML10,
author = {Hui Wang and
Zhiwei Lin and
Sally I. McClean and
Jun Liu},
editor = {Wei Fan and
Wynne Hsu and
Geoffrey I. Webb and
Bing Liu and
Chengqi Zhang and
Dimitrios Gunopulos and
Xindong Wu},
title = {Measuring Similarity for Multidimensional Sequences},
booktitle = {{ICDMW} 2010, The 10th {IEEE} International Conference on Data Mining
Workshops, Sydney, Australia, 13 December 2010},
pages = {281--287},
publisher = {{IEEE} Computer Society},
year = {2010},
url = {https://doi.org/10.1109/ICDMW.2010.202},
doi = {10.1109/ICDMW.2010.202},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icdm/WangLML10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kdd/HoTL10,
author = {Shen{-}Shyang Ho and
Wenqing Tang and
W. Timothy Liu},
editor = {Bharat Rao and
Balaji Krishnapuram and
Andrew Tomkins and
Qiang Yang},
title = {Tropical cyclone event sequence similarity search via dimensionality
reduction and metric learning},
booktitle = {Proceedings of the 16th {ACM} {SIGKDD} International Conference on
Knowledge Discovery and Data Mining, Washington, DC, USA, July 25-28,
2010},
pages = {135--144},
publisher = {{ACM}},
year = {2010},
url = {https://doi.org/10.1145/1835804.1835824},
doi = {10.1145/1835804.1835824},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/kdd/HoTL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/naacl/AllauzenKMMR10,
author = {Cyril Allauzen and
Shankar Kumar and
Wolfgang Macherey and
Mehryar Mohri and
Michael Riley},
title = {Expected Sequence Similarity Maximization},
booktitle = {Human Language Technologies: Conference of the North American Chapter
of the Association of Computational Linguistics, Proceedings, June
2-4, 2010, Los Angeles, California, {USA}},
pages = {957--965},
publisher = {The Association for Computational Linguistics},
year = {2010},
url = {https://aclanthology.org/N10-1139/},
timestamp = {Fri, 06 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/naacl/AllauzenKMMR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/otm/WangHWWHS10,
author = {Jianmin Wang and
Tengfei He and
Lijie Wen and
Nianhua Wu and
Arthur H. M. ter Hofstede and
Jianwen Su},
editor = {Robert Meersman and
Tharam S. Dillon and
Pilar Herrero},
title = {A Behavioral Similarity Measure between Labeled Petri Nets Based on
Principal Transition Sequences - (Short Paper)},
booktitle = {On the Move to Meaningful Internet Systems: {OTM} 2010 - Confederated
International Conferences: CoopIS, IS, {DOA} and ODBASE, Hersonissos,
Crete, Greece, October 25-29, 2010, Proceedings, Part {I}},
series = {Lecture Notes in Computer Science},
volume = {6426},
pages = {394--401},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-16934-2\_27},
doi = {10.1007/978-3-642-16934-2\_27},
timestamp = {Thu, 14 Oct 2021 10:28:29 +0200},
biburl = {https://dblp.org/rec/conf/otm/WangHWWHS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pakdd/LiuFFD10,
author = {Haishan Liu and
Gwen A. Frishkoff and
Robert M. Frank and
Dejing Dou},
editor = {Mohammed Javeed Zaki and
Jeffrey Xu Yu and
Balaraman Ravindran and
Vikram Pudi},
title = {Ontology-Based Mining of Brainwaves: {A} Sequence Similarity Technique
for Mapping Alternative Features in Event-Related Potentials {(ERP)}
Data},
booktitle = {Advances in Knowledge Discovery and Data Mining, 14th Pacific-Asia
Conference, {PAKDD} 2010, Hyderabad, India, June 21-24, 2010. Proceedings.
Part {II}},
series = {Lecture Notes in Computer Science},
volume = {6119},
pages = {43--54},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13672-6\_5},
doi = {10.1007/978-3-642-13672-6\_5},
timestamp = {Tue, 14 May 2019 10:00:51 +0200},
biburl = {https://dblp.org/rec/conf/pakdd/LiuFFD10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/rcis/ObwegerSSR10,
author = {Hannes Obweger and
Martin Suntinger and
Josef Schiefer and
G{\"{u}}nther R. Raidl},
editor = {Pericles Loucopoulos and
Jean{-}Louis Cavarero},
title = {Similarity Searching in Sequences of Complex Events},
booktitle = {Proceedings of the Fourth {IEEE} International Conference on Research
Challenges in Information Science, {RCIS} 2010, Nice, France, May
19-21, 2010},
pages = {631--640},
publisher = {{IEEE}},
year = {2010},
url = {https://doi.org/10.1109/RCIS.2010.5507423},
doi = {10.1109/RCIS.2010.5507423},
timestamp = {Wed, 16 Oct 2019 14:14:57 +0200},
biburl = {https://dblp.org/rec/conf/rcis/ObwegerSSR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sspr/Andres-FerrerSC10,
author = {Jes{\'{u}}s Andr{\'{e}}s{-}Ferrer and
Germ{\'{a}}n Sanchis{-}Trilles and
Francisco Casacuberta},
editor = {Edwin R. Hancock and
Richard C. Wilson and
Terry Windeatt and
Ilkay Ulusoy and
Francisco Escolano},
title = {Similarity Word-Sequence Kernels for Sentence Clustering},
booktitle = {Structural, Syntactic, and Statistical Pattern Recognition, Joint
{IAPR} International Workshop, SSPR{\&}SPR 2010, Cesme, Izmir,
Turkey, August 18-20, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6218},
pages = {610--619},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-14980-1\_60},
doi = {10.1007/978-3-642-14980-1\_60},
timestamp = {Tue, 14 May 2019 10:00:36 +0200},
biburl = {https://dblp.org/rec/conf/sspr/Andres-FerrerSC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/adt/TavenardAG09,
author = {Romain Tavenard and
Laurent Amsaleg and
Guillaume Gravier},
title = {Model-based similarity estimation of multidimensional temporal sequences},
journal = {Ann. des T{\'{e}}l{\'{e}}communications},
volume = {64},
number = {5-6},
pages = {381--390},
year = {2009},
url = {https://doi.org/10.1007/s12243-009-0091-4},
doi = {10.1007/S12243-009-0091-4},
timestamp = {Wed, 20 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/adt/TavenardAG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AhmedSSNN09,
author = {Shamim Ahmed and
Ayumu Saito and
Miho Suzuki and
Naoto Nemoto and
Koichi Nishigaki},
title = {Host-parasite relations of bacteria and phages can be unveiled by
\emph{Oligostickiness}, a measure of relaxed sequence similarity},
journal = {Bioinform.},
volume = {25},
number = {5},
pages = {563--570},
year = {2009},
url = {https://doi.org/10.1093/bioinformatics/btp003},
doi = {10.1093/BIOINFORMATICS/BTP003},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AhmedSSNN09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangSG09,
author = {Yong Wang and
Ruslan Sadreyev and
Nick V. Grishin},
title = {{PROCAIN} server for remote protein sequence similarity search},
journal = {Bioinform.},
volume = {25},
number = {16},
pages = {2076--2077},
year = {2009},
url = {https://doi.org/10.1093/bioinformatics/btp346},
doi = {10.1093/BIOINFORMATICS/BTP346},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WangSG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XieXB09,
author = {Lei Xie and
Li Xie and
Philip E. Bourne},
title = {A unified statistical model to support local sequence order independent
similarity searching for ligand-binding sites and its application
to genome-based drug discovery},
journal = {Bioinform.},
volume = {25},
number = {12},
year = {2009},
url = {https://doi.org/10.1093/bioinformatics/btp220},
doi = {10.1093/BIOINFORMATICS/BTP220},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/XieXB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CarageaSDH09,
author = {Cornelia Caragea and
Jivko Sinapov and
Drena Dobbs and
Vasant G. Honavar},
title = {Mixture of experts models to exploit global sequence similarity on
biomolecular sequence labeling},
journal = {{BMC} Bioinform.},
volume = {10},
number = {{S-4}},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-S4-S4},
doi = {10.1186/1471-2105-10-S4-S4},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/CarageaSDH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isb/WieserN09,
author = {Daniela Wieser and
Mahesan Niranjan},
title = {Remote Homology Detection Using a Kernel Method that Combines Sequence
and Secondary-Structure Similarity Scores},
journal = {Silico Biol.},
volume = {9},
number = {3},
pages = {89--103},
year = {2009},
url = {https://doi.org/10.3233/ISB-2009-0390},
doi = {10.3233/ISB-2009-0390},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/isb/WieserN09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KimCG09,
author = {Bong{-}Hyun Kim and
Hua Cheng and
Nick V. Grishin},
title = {HorA web server to infer homology between proteins using sequence
and structural similarity},
journal = {Nucleic Acids Res.},
volume = {37},
number = {Web-Server-Issue},
pages = {532--538},
year = {2009},
url = {https://doi.org/10.1093/nar/gkp328},
doi = {10.1093/NAR/GKP328},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KimCG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/pc/MengC09,
author = {Xiandong Meng and
Vipin Chaudhary},
title = {Boosting data throughput for sequence database similarity searches
on FPGAs using an adaptive buffering scheme},
journal = {Parallel Comput.},
volume = {35},
number = {1},
pages = {1--11},
year = {2009},
url = {https://doi.org/10.1016/j.parco.2008.09.010},
doi = {10.1016/J.PARCO.2008.09.010},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/pc/MengC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tvcg/VrotsouJC09,
author = {Katerina Vrotsou and
Jimmy Johansson and
Matthew Cooper},
title = {ActiviTree: Interactive Visual Exploration of Sequences in Event-Based
Data Using Graph Similarity},
journal = {{IEEE} Trans. Vis. Comput. Graph.},
volume = {15},
number = {6},
pages = {945--952},
year = {2009},
url = {https://doi.org/10.1109/TVCG.2009.117},
doi = {10.1109/TVCG.2009.117},
timestamp = {Sat, 10 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tvcg/VrotsouJC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cvpr/Rodriguez-SerranoPLS09,
author = {Jos{\'{e}} A. Rodr{\'{\i}}guez{-}Serrano and
Florent Perronnin and
Josep Llad{\'{o}}s and
Gemma S{\'{a}}nchez},
title = {A similarity measure between vector sequences with application to
handwritten word image retrieval},
booktitle = {2009 {IEEE} Computer Society Conference on Computer Vision and Pattern
Recognition {(CVPR} 2009), 20-25 June 2009, Miami, Florida, {USA}},
pages = {1722--1729},
publisher = {{IEEE} Computer Society},
year = {2009},
url = {https://doi.org/10.1109/CVPR.2009.5206783},
doi = {10.1109/CVPR.2009.5206783},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cvpr/Rodriguez-SerranoPLS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dcc/DahlOJJ09,
author = {Joachim Dahl and
Jan {\O}stergaard and
Tobias Lindstr{\o}m Jensen and
S{\o}ren Holdt Jensen},
editor = {James A. Storer and
Michael W. Marcellin},
title = {l1 Compression of Image Sequences Using the Structural Similarity
Index Measure},
booktitle = {2009 Data Compression Conference {(DCC} 2009), 16-18 March 2009, Snowbird,
UT, {USA}},
pages = {133--142},
publisher = {{IEEE} Computer Society},
year = {2009},
url = {https://doi.org/10.1109/DCC.2009.28},
doi = {10.1109/DCC.2009.28},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/dcc/DahlOJJ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fskd/YouGDRLZ09,
author = {Wei You and
Shuai Gao and
Haidi Deng and
Shengsheng Ruan and
Hongying Lu and
Yancai Zhang},
editor = {Yixin Chen and
Hepu Deng and
Degan Zhang and
Yingyuan Xiao},
title = {Similarity Analysis of {DNA} Sequences Using},
booktitle = {Sixth International Conference on Fuzzy Systems and Knowledge Discovery,
{FSKD} 2009, Tianjin, China, 14-16 August 2009, 6 Volumes},
pages = {75--79},
publisher = {{IEEE} Computer Society},
year = {2009},
url = {https://doi.org/10.1109/FSKD.2009.829},
doi = {10.1109/FSKD.2009.829},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/fskd/YouGDRLZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icecsys/LakehalFT09,
author = {Mohamed Reda Lakehal and
Youcef Ferdi and
Abdelmalik Taleb{-}Ahmed},
title = {Generation of FARIMA(0, {\(\alpha\)}, 0) sequences by recursive filtering:
Testing for self-similarity},
booktitle = {16th {IEEE} International Conference on Electronics, Circuits, and
Systems, {ICECS} 2009, Yasmine Hammamet, Tunisia, 13-19 December,
2009},
pages = {563--566},
publisher = {{IEEE}},
year = {2009},
url = {https://doi.org/10.1109/ICECS.2009.5410865},
doi = {10.1109/ICECS.2009.5410865},
timestamp = {Wed, 16 Oct 2019 14:14:55 +0200},
biburl = {https://dblp.org/rec/conf/icecsys/LakehalFT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icmcs/WangSL09,
author = {Lei Wang and
Chng Eng Siong and
Haizhou Li},
title = {Efficient sparse self-similarity matrix construction for repeating
sequence detection},
booktitle = {Proceedings of the 2009 {IEEE} International Conference on Multimedia
and Expo, {ICME} 2009, June 28 - July 2, 2009, New York City, NY,
{USA}},
pages = {458--461},
publisher = {{IEEE}},
year = {2009},
url = {https://doi.org/10.1109/ICME.2009.5202533},
doi = {10.1109/ICME.2009.5202533},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icmcs/WangSL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iconip/DoW09,
author = {Hai Thanh Do and
Dianhui Wang},
editor = {Chi{-}Sing Leung and
Minho Lee and
Jonathan Hoyin Chan},
title = {Overlap-Based Similarity Metrics for Motif Search in {DNA} Sequences},
booktitle = {Neural Information Processing, 16th International Conference, {ICONIP}
2009, Bangkok, Thailand, December 1-5, 2009, Proceedings, Part {II}},
series = {Lecture Notes in Computer Science},
volume = {5864},
pages = {465--474},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-10684-2\_52},
doi = {10.1007/978-3-642-10684-2\_52},
timestamp = {Tue, 14 May 2019 10:00:42 +0200},
biburl = {https://dblp.org/rec/conf/iconip/DoW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icsm/BrooksM09,
author = {Penelope A. Brooks and
Atif M. Memon},
title = {Introducing a test suite similarity metric for event sequence-based
test cases},
booktitle = {25th {IEEE} International Conference on Software Maintenance {(ICSM}
2009), September 20-26, 2009, Edmonton, Alberta, Canada},
pages = {243--252},
publisher = {{IEEE} Computer Society},
year = {2009},
url = {https://doi.org/10.1109/ICSM.2009.5306305},
doi = {10.1109/ICSM.2009.5306305},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icsm/BrooksM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/skg/XuZQX09,
author = {Shuo Xu and
Lijun Zhu and
Xiaodong Qiao and
Cun{-}Xiang Xue},
title = {A Novel Approach for Measuring Chinese Terms Semantic Similarity Based
on Pairwise Sequence Alignment},
booktitle = {Fifth International Conference on Semantics, Knowledge and Grid, {SKG}
2009, Zhuhai, China, October 12-14, 2009},
pages = {92--98},
publisher = {{IEEE} Computer Society},
year = {2009},
url = {https://doi.org/10.1109/SKG.2009.34},
doi = {10.1109/SKG.2009.34},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/skg/XuZQX09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/EspadalerEQASMO08,
author = {Jordi Espadaler and
Narayanan Eswar and
Enrique Querol and
Francesc X. Avil{\'{e}}s and
Andrej Sali and
Marc A. Mart{\'{\i}}{-}Renom and
Baldomero Oliva},
title = {Prediction of enzyme function by combining sequence similarity and
protein interactions},
journal = {{BMC} Bioinform.},
volume = {9},
year = {2008},
url = {https://doi.org/10.1186/1471-2105-9-249},
doi = {10.1186/1471-2105-9-249},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/EspadalerEQASMO08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GilchristCHPSUP08,
author = {Michael J. Gilchrist and
Mikkel B. Christensen and
Richard Harland and
Nicolas Pollet and
James C. Smith and
Naoto Ueno and
Nancy Papalopulu},
title = {Evading the annotation bottleneck: using sequence similarity to search
non-sequence gene data},
journal = {{BMC} Bioinform.},
volume = {9},
year = {2008},
url = {https://doi.org/10.1186/1471-2105-9-442},
doi = {10.1186/1471-2105-9-442},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/GilchristCHPSUP08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KurganCC08,
author = {Lukasz A. Kurgan and
Krzysztof J. Cios and
Ke Chen},
title = {{SCPRED:} Accurate prediction of protein structural class for sequences
of twilight-zone similarity with predicting sequences},
journal = {{BMC} Bioinform.},
volume = {9},
year = {2008},
url = {https://doi.org/10.1186/1471-2105-9-226},
doi = {10.1186/1471-2105-9-226},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KurganCC08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ccsecis/DuraiswamyM08a,
author = {K. Duraiswamy and
V. Valli Mayil},
title = {Similarity Matrix Based Session Clustering by Sequence Alignment Using
Dynamic Programming},
journal = {Comput. Inf. Sci.},
volume = {1},
number = {3},
pages = {66--72},
year = {2008},
url = {https://doi.org/10.5539/cis.v1n3p66},
doi = {10.5539/CIS.V1N3P66},
timestamp = {Thu, 09 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ccsecis/DuraiswamyM08a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ir/SiYKF08,
author = {Luo Si and
Danni Yu and
Daisuke Kihara and
Yi Fang},
title = {Combining gene sequence similarity and textual information for gene
function annotation in the literature},
journal = {Inf. Retr.},
volume = {11},
number = {5},
pages = {389--404},
year = {2008},
url = {https://doi.org/10.1007/s10791-008-9053-0},
doi = {10.1007/S10791-008-9053-0},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ir/SiYKF08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/OthmanDI08,
author = {Razib M. Othman and
Safaai Deris and
Rosli Md. Illias},
title = {A genetic similarity algorithm for searching the Gene Ontology terms
and annotating anonymous protein sequences},
journal = {J. Biomed. Informatics},
volume = {41},
number = {1},
pages = {65--81},
year = {2008},
url = {https://doi.org/10.1016/j.jbi.2007.05.010},
doi = {10.1016/J.JBI.2007.05.010},
timestamp = {Tue, 16 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbi/OthmanDI08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/MaculaSBR08,
author = {Anthony J. Macula and
Alexander Schliep and
Morgan A. Bishop and
Thomas E. Renz},
title = {New, Improved, and Practical k-Stem Sequence Similarity Measures for
Probe Design},
journal = {J. Comput. Biol.},
volume = {15},
number = {5},
pages = {525--534},
year = {2008},
url = {https://doi.org/10.1089/cmb.2007.0208},
doi = {10.1089/CMB.2007.0208},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/MaculaSBR08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/YaoDNHNZZ08,
author = {Yu{-}Hua Yao and
Qi Dai and
Xu{-}Ying Nan and
Ping{-}An He and
Zuo{-}Ming Nie and
Song{-}Ping Zhou and
Yao{-}Zhou Zhang},
title = {Analysis of similarity/dissimilarity of {DNA} sequences based on a
class of 2D graphical representation},
journal = {J. Comput. Chem.},
volume = {29},
number = {10},
pages = {1632--1639},
year = {2008},
url = {https://doi.org/10.1002/jcc.20922},
doi = {10.1002/JCC.20922},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcc/YaoDNHNZZ08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/LounkineB08,
author = {Eugen Lounkine and
J{\"{u}}rgen Bajorath},
title = {Core Trees and Consensus Fragment Sequences for Molecular Representation
and Similarity Analysis},
journal = {J. Chem. Inf. Model.},
volume = {48},
number = {6},
pages = {1161--1166},
year = {2008},
url = {https://doi.org/10.1021/ci800020s},
doi = {10.1021/CI800020S},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcisd/LounkineB08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/SongJDD08,
author = {Nan Song and
Jacob M. Joseph and
George B. Davis and
Dannie Durand},
title = {Sequence Similarity Network Reveals Common Ancestry of Multidomain
Proteins},
journal = {PLoS Comput. Biol.},
volume = {4},
number = {5},
year = {2008},
url = {https://doi.org/10.1371/journal.pcbi.1000063},
doi = {10.1371/JOURNAL.PCBI.1000063},
timestamp = {Thu, 10 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/SongJDD08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apweb/SongCZXY08,
author = {Guojie Song and
Bin Cui and
Baihua Zheng and
Kunqing Xie and
Dongqing Yang},
editor = {Yanchun Zhang and
Ge Yu and
Elisa Bertino and
Guandong Xu},
title = {Squeezing Long Sequence Data for Efficient Similarity Search},
booktitle = {Progress in {WWW} Research and Development, 10th Asia-Pacific Web
Conference, APWeb 2008, Shenyang, China, April 26-28, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4976},
pages = {438--449},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-78849-2\_44},
doi = {10.1007/978-3-540-78849-2\_44},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apweb/SongCZXY08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/apweb/ZhangYYL08,
author = {Haiwei Zhang and
Xiaojie Yuan and
Na Yang and
Zhongqi Liu},
editor = {Yanchun Zhang and
Ge Yu and
Elisa Bertino and
Guandong Xu},
title = {Similarity Computation for {XML} Documents by {XML} Element Sequence
Patterns},
booktitle = {Progress in {WWW} Research and Development, 10th Asia-Pacific Web
Conference, APWeb 2008, Shenyang, China, April 26-28, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4976},
pages = {227--232},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-78849-2\_24},
doi = {10.1007/978-3-540-78849-2\_24},
timestamp = {Fri, 26 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/apweb/ZhangYYL08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/CarageaSDH08,
author = {Cornelia Caragea and
Jivko Sinapov and
Drena Dobbs and
Vasant G. Honavar},
editor = {Xue{-}wen Chen and
Xiaohua Hu and
Sun Kim},
title = {Using Global Sequence Similarity to Enhance Biological Sequence Labeling},
booktitle = {2008 {IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2008, Philadephia, Pennsylvania, USA, November 3-5, 2008},
pages = {104--111},
publisher = {{IEEE} Computer Society},
year = {2008},
url = {https://doi.org/10.1109/BIBM.2008.54},
doi = {10.1109/BIBM.2008.54},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/CarageaSDH08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biocomp/KeQ08,
author = {Chen Ke and
Zhu Qingxin},
editor = {Hamid R. Arabnia and
Mary Qu Yang and
Jack Y. Yang},
title = {Similarity Search for Sequence Based On Grouped Seeds Criterion with
Optimal Search Mechanism},
booktitle = {International Conference on Bioinformatics {\&} Computational
Biology, {BIOCOMP} 2008, July 14-17, 2008, Las Vegas Nevada, USA,
2 Volumes},
pages = {844--847},
publisher = {{CSREA} Press},
year = {2008},
timestamp = {Fri, 06 Feb 2009 11:52:50 +0100},
biburl = {https://dblp.org/rec/conf/biocomp/KeQ08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icde/Miranker08,
author = {Daniel P. Miranker},
title = {Evolving models of biological sequence similarity},
booktitle = {Proceedings of the 24th International Conference on Data Engineering
Workshops, {ICDE} 2008, April 7-12, 2008, Canc{\'{u}}n, Mexico},
pages = {301--307},
publisher = {{IEEE} Computer Society},
year = {2008},
url = {https://doi.org/10.1109/ICDEW.2008.4498339},
doi = {10.1109/ICDEW.2008.4498339},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icde/Miranker08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icde/SacanT08,
author = {Ahmet Sacan and
Ismail Hakki Toroslu},
title = {Approximate similarity search in genomic sequence databases using
landmark-guided embedding},
booktitle = {Proceedings of the 24th International Conference on Data Engineering
Workshops, {ICDE} 2008, April 7-12, 2008, Canc{\'{u}}n, Mexico},
pages = {338--345},
publisher = {{IEEE} Computer Society},
year = {2008},
url = {https://doi.org/10.1109/ICDEW.2008.4498343},
doi = {10.1109/ICDEW.2008.4498343},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icde/SacanT08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icdm/KelilW08,
author = {Abdellali Kelil and
Shengrui Wang},
title = {{SCS:} {A} New Similarity Measure for Categorical Sequences},
booktitle = {Proceedings of the 8th {IEEE} International Conference on Data Mining
{(ICDM} 2008), December 15-19, 2008, Pisa, Italy},
pages = {343--352},
publisher = {{IEEE} Computer Society},
year = {2008},
url = {https://doi.org/10.1109/ICDM.2008.43},
doi = {10.1109/ICDM.2008.43},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icdm/KelilW08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iucs/ShtykhJ08,
author = {Roman Y. Shtykh and
Qun Jin},
title = {Inferring User Interests from Relevance Feedback with High Similarity
Sequence Data-Driven Clustering},
booktitle = {{ISUC} 2008, Second International Symposium on Universal Communication,
Osaka, Japan, 15-16 December 2008},
pages = {390--396},
publisher = {{IEEE} Computer Society},
year = {2008},
url = {https://doi.org/10.1109/ISUC.2008.39},
doi = {10.1109/ISUC.2008.39},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iucs/ShtykhJ08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iwpacbb/DeusdadoC08,
author = {S{\'{e}}rgio A. D. Deusdado and
Paulo M. M. Carvalho},
editor = {Juan M. Corchado and
Juan Francisco de Paz and
Miguel Rocha and
Florentino Fern{\'{a}}ndez Riverola},
title = {SimSearch: {A} New Variant of Dynamic Programming Based on Distance
Series for Optimal and Near-Optimal Similarity Discovery in Biological
Sequences},
booktitle = {2nd International Workshop on Practical Applications of Computational
Biology and Bioinformatics, {IWPACBB} 2008, Salamanca, Spain, 22th-24th
October 2008},
series = {Advances in Soft Computing},
volume = {49},
pages = {206--216},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-85861-4\_25},
doi = {10.1007/978-3-540-85861-4\_25},
timestamp = {Wed, 12 Oct 2022 08:58:53 +0200},
biburl = {https://dblp.org/rec/conf/iwpacbb/DeusdadoC08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kes/GrecoT08,
author = {Gianluigi Greco and
Giorgio Terracina},
editor = {Ignac Lovrek and
Robert J. Howlett and
Lakhmi C. Jain},
title = {Measuring Sequence Similarity Trough Many-to-Many Frequent Correlations},
booktitle = {Knowledge-Based Intelligent Information and Engineering Systems, 12th
International Conference, {KES} 2008, Zagreb, Croatia, September 3-5,
2008, Proceedings, Part {I}},
series = {Lecture Notes in Computer Science},
volume = {5177},
pages = {484--492},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-85563-7\_62},
doi = {10.1007/978-3-540-85563-7\_62},
timestamp = {Tue, 14 May 2019 10:00:51 +0200},
biburl = {https://dblp.org/rec/conf/kes/GrecoT08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/mdai/Gomez-AlonsoV08,
author = {Cristina G{\'{o}}mez{-}Alonso and
A{\"{\i}}da Valls},
editor = {Vicen{\c{c}} Torra and
Yasuo Narukawa},
title = {A Similarity Measure for Sequences of Categorical Data Based on the
Ordering of Common Elements},
booktitle = {Modeling Decisions for Artificial Intelligence, 5th International
Conference, {MDAI} 2008, Sabadell, Spain, October 30-31, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5285},
pages = {134--145},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-88269-5\_13},
doi = {10.1007/978-3-540-88269-5\_13},
timestamp = {Tue, 14 May 2019 10:00:52 +0200},
biburl = {https://dblp.org/rec/conf/mdai/Gomez-AlonsoV08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sisap/Miranker08,
author = {Daniel P. Miranker},
editor = {Edgar Ch{\'{a}}vez and
Gonzalo Navarro},
title = {Evolving Models of Biological Sequence Similarity},
booktitle = {First International Workshop on Similarity Search and Applications,
{SISAP} 2008, Cancun, Quintana Roo, Mexico, 11-12 April 2008},
pages = {3--9},
publisher = {{IEEE} Computer Society},
year = {2008},
url = {https://doi.org/10.1109/SISAP.2008.23},
doi = {10.1109/SISAP.2008.23},
timestamp = {Wed, 28 Feb 2024 00:16:41 +0100},
biburl = {https://dblp.org/rec/conf/sisap/Miranker08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sisap/SacanT08,
author = {Ahmet Sacan and
Ismail Hakki Toroslu},
editor = {Edgar Ch{\'{a}}vez and
Gonzalo Navarro},
title = {Approximate Similarity Search in Genomic Sequence Databases Using
Landmark-Guided Embedding},
booktitle = {First International Workshop on Similarity Search and Applications,
{SISAP} 2008, Cancun, Quintana Roo, Mexico, 11-12 April 2008},
pages = {43--50},
publisher = {{IEEE} Computer Society},
year = {2008},
url = {https://doi.org/10.1109/SISAP.2008.7},
doi = {10.1109/SISAP.2008.7},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/sisap/SacanT08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/sci/Bogan-MartaHP08,
author = {Alina Bogan{-}Marta and
A. Hategan and
Ioannis Pitas},
editor = {Arpad Kelemen and
Ajith Abraham and
Yulan Liang},
title = {Language engineering and information theoretic methods in protein
sequence similarity studies},
booktitle = {Computational Intelligence in Medical Informatics},
series = {Studies in Computational Intelligence},
volume = {85},
pages = {151--183},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-75767-2\_8},
doi = {10.1007/978-3-540-75767-2\_8},
timestamp = {Tue, 16 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/series/sci/Bogan-MartaHP08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DaltonJ07,
author = {James A. R. Dalton and
Richard M. Jackson},
title = {An evaluation of automated homology modelling methods at low target-template
sequence similarity},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {1901--1908},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm262},
doi = {10.1093/BIOINFORMATICS/BTM262},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DaltonJ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FerraginaGGMV07,
author = {Paolo Ferragina and
Raffaele Giancarlo and
Valentina Greco and
Giovanni Manzini and
Gabriel Valiente},
title = {Compression-based classification of biological sequences and structures
via the Universal Similarity Metric: experimental assessment},
journal = {{BMC} Bioinform.},
volume = {8},
year = {2007},
url = {https://doi.org/10.1186/1471-2105-8-252},
doi = {10.1186/1471-2105-8-252},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FerraginaGGMV07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FerroGPPPPR07,
author = {Alfredo Ferro and
Rosalba Giugno and
Giuseppe Pigola and
Alfredo Pulvirenti and
Cinzia Di Pietro and
Michele Purrello and
Marco Ragusa},
title = {Sequence similarity is more relevant than species specificity in probabilistic
backtranslation},
journal = {{BMC} Bioinform.},
volume = {8},
year = {2007},
url = {https://doi.org/10.1186/1471-2105-8-58},
doi = {10.1186/1471-2105-8-58},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FerroGPPPPR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KelilWBF07,
author = {Abdellali Kelil and
Shengrui Wang and
Ryszard Brzezinski and
Alain Fleury},
title = {{CLUSS:} Clustering of protein sequences based on a new similarity
measure},
journal = {{BMC} Bioinform.},
volume = {8},
year = {2007},
url = {https://doi.org/10.1186/1471-2105-8-286},
doi = {10.1186/1471-2105-8-286},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/KelilWBF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/QiSWKG07,
author = {Yuan Qi and
Ruslan Sadreyev and
Yong Wang and
Bong{-}Hyun Kim and
Nick V. Grishin},
title = {A comprehensive system for evaluation of remote sequence similarity
detection},
journal = {{BMC} Bioinform.},
volume = {8},
year = {2007},
url = {https://doi.org/10.1186/1471-2105-8-314},
doi = {10.1186/1471-2105-8-314},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/QiSWKG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/JeffersonB07,
author = {Emily R. Jefferson and
Geoffrey J. Barton},
title = {The relationship between domain-domain interaction orientation and
sequence similarity},
journal = {{BMC} Syst. Biol.},
volume = {1},
number = {{S-1}},
pages = {S13},
year = {2007},
url = {https://doi.org/10.1186/1752-0509-1-S1-S13},
doi = {10.1186/1752-0509-1-S1-S13},
timestamp = {Tue, 05 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcsb/JeffersonB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijon/NianJZF07,
author = {Rui Nian and
Guangrong Ji and
Wencang Zhao and
Chen Feng},
title = {Probabilistic 3D object recognition from 2D invariant view sequence
based on similarity},
journal = {Neurocomputing},
volume = {70},
number = {4-6},
pages = {785--793},
year = {2007},
url = {https://doi.org/10.1016/j.neucom.2006.10.029},
doi = {10.1016/J.NEUCOM.2006.10.029},
timestamp = {Sat, 20 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijon/NianJZF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijon/TianMY07,
author = {Shengfeng Tian and
Shaomin Mu and
Chuanhuan Yin},
title = {Sequence-similarity kernels for SVMs to detect anomalies in system
calls},
journal = {Neurocomputing},
volume = {70},
number = {4-6},
pages = {859--866},
year = {2007},
url = {https://doi.org/10.1016/j.neucom.2006.10.017},
doi = {10.1016/J.NEUCOM.2006.10.017},
timestamp = {Sat, 20 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijon/TianMY07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijprai/Wang07,
author = {Hui Wang},
title = {Subsequence Counting as a Measure of Similarity for Sequences},
journal = {Int. J. Pattern Recognit. Artif. Intell.},
volume = {21},
number = {4},
pages = {745--758},
year = {2007},
url = {https://doi.org/10.1142/S021800140700565X},
doi = {10.1142/S021800140700565X},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijprai/Wang07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/prl/ChiewchanwattanaLC07,
author = {Sirapat Chiewchanwattana and
Chidchanok Lursinsap and
Chee{-}Hung Henry Chu},
title = {Imputing incomplete time-series data based on varied-window similarity
measure of data sequences},
journal = {Pattern Recognit. Lett.},
volume = {28},
number = {9},
pages = {1091--1103},
year = {2007},
url = {https://doi.org/10.1016/j.patrec.2007.01.008},
doi = {10.1016/J.PATREC.2007.01.008},
timestamp = {Sat, 22 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/prl/ChiewchanwattanaLC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/3dim/HuangSH07,
author = {Peng Huang and
Jonathan Starck and
Adrian Hilton},
title = {A Study of Shape Similarity for Temporal Surface Sequences of People},
booktitle = {Sixth International Conference on 3-D Digital Imaging and Modeling,
3DIM 2007, 21-23 August 2007, Montreal, Quebec, Canada},
pages = {408--418},
publisher = {{IEEE} Computer Society},
year = {2007},
url = {https://doi.org/10.1109/3DIM.2007.8},
doi = {10.1109/3DIM.2007.8},
timestamp = {Fri, 19 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/3dim/HuangSH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/adma/PanHXWL07,
author = {Haiwei Pan and
Qilong Han and
Xiaoqin Xie and
Wei Zhang and
Jianzhong Li},
editor = {Reda Alhajj and
Hong Gao and
Xue Li and
Jianzhong Li and
Osmar R. Za{\"{\i}}ane},
title = {A Similarity Retrieval Method in Brain Image Sequence Database},
booktitle = {Advanced Data Mining and Applications, Third International Conference,
{ADMA} 2007, Harbin, China, August 6-8, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4632},
pages = {352--364},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-73871-8\_33},
doi = {10.1007/978-3-540-73871-8\_33},
timestamp = {Thu, 04 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/adma/PanHXWL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/Khabiri07,
author = {Elham Khabiri},
title = {A Preliminary Study of Correlation between Depth and Path Length of
{GO} Nodes with Gene Sequence Similarity},
booktitle = {Proceedings of the 7th {IEEE} International Conference on Bioinformatics
and Bioengineering, {BIBE} 2007, October 14-17, 2007, Harvard Medical
School, Boston, MA, {USA}},
pages = {896--899},
publisher = {{IEEE} Computer Society},
year = {2007},
url = {https://doi.org/10.1109/BIBE.2007.4375665},
doi = {10.1109/BIBE.2007.4375665},
timestamp = {Wed, 16 Oct 2019 14:14:56 +0200},
biburl = {https://dblp.org/rec/conf/bibe/Khabiri07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/ZhengWH07,
author = {Huiru Zheng and
Haiying Wang and
Jinglu Hu},
title = {Cluster Analysis of Regulatory Sequences with a Log Likelihood Ratio
Statistics-based Similarity Measure},
booktitle = {Proceedings of the 7th {IEEE} International Conference on Bioinformatics
and Bioengineering, {BIBE} 2007, October 14-17, 2007, Harvard Medical
School, Boston, MA, {USA}},
pages = {1220--1224},
publisher = {{IEEE} Computer Society},
year = {2007},
url = {https://doi.org/10.1109/BIBE.2007.4375719},
doi = {10.1109/BIBE.2007.4375719},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/ZhengWH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biocomp/LiK07,
author = {Xuehui Li and
Tamer Kahveci},
editor = {Hamid R. Arabnia and
Mary Qu Yang and
Jack Y. Yang},
title = {Quality-Based Similarity Search for Biological Sequence Databases},
booktitle = {International Conference on Bioinformatics {\&} Computational
Biology, {BIOCOMP} 2007, Volume II, June 25-28, 2007, Las Vegas Nevada,
{USA}},
pages = {567--573},
publisher = {{CSREA} Press},
year = {2007},
timestamp = {Fri, 14 Dec 2007 13:10:44 +0100},
biburl = {https://dblp.org/rec/conf/biocomp/LiK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/Jiang07,
author = {Tao Jiang},
editor = {Bin Ma and
Kaizhong Zhang},
title = {A Combinatorial Approach to Genome-Wide Ortholog Assignment: Beyond
Sequence Similarity Search},
booktitle = {Combinatorial Pattern Matching, 18th Annual Symposium, {CPM} 2007,
London, Canada, July 9-11, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4580},
pages = {1},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-73437-6\_1},
doi = {10.1007/978-3-540-73437-6\_1},
timestamp = {Thu, 07 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cpm/Jiang07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dexa/GuJ07,
author = {Jie Gu and
Xiaoming Jin},
editor = {Roland R. Wagner and
Norman Revell and
G{\"{u}}nther Pernul},
title = {Similarity Search over Incomplete Symbolic Sequences},
booktitle = {Database and Expert Systems Applications, 18th International Conference,
{DEXA} 2007, Regensburg, Germany, September 3-7, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4653},
pages = {339--348},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-74469-6\_34},
doi = {10.1007/978-3-540-74469-6\_34},
timestamp = {Tue, 14 May 2019 10:00:46 +0200},
biburl = {https://dblp.org/rec/conf/dexa/GuJ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fskd/LiJ07,
author = {Guohe Li and
Xi Jiang},
editor = {J. Lei},
title = {Feature Abstraction of Time-Sequence Curve and Its Similarity Calculation},
booktitle = {Fourth International Conference on Fuzzy Systems and Knowledge Discovery,
{FSKD} 2007, 24-27 August 2007, Haikou, Hainan, China, Proceedings,
Volume 4},
pages = {374--378},
publisher = {{IEEE} Computer Society},
year = {2007},
url = {https://doi.org/10.1109/FSKD.2007.289},
doi = {10.1109/FSKD.2007.289},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/fskd/LiJ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fskd/ShiCN07,
author = {Feng Shi and
Qiujian Chen and
Xiao{-}hui Niu},
editor = {J. Lei},
title = {Functional Similarity Analyzing of Protein Sequences with Empirical
Mode Decomposition},
booktitle = {Fourth International Conference on Fuzzy Systems and Knowledge Discovery,
{FSKD} 2007, 24-27 August 2007, Haikou, Hainan, China, Proceedings,
Volume 2},
pages = {766--770},
publisher = {{IEEE} Computer Society},
year = {2007},
url = {https://doi.org/10.1109/FSKD.2007.315},
doi = {10.1109/FSKD.2007.315},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/fskd/ShiCN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccS/LeeK07,
author = {Seok{-}Lyong Lee and
Deok{-}Hwan Kim},
editor = {Yong Shi and
G. Dick van Albada and
Jack J. Dongarra and
Peter M. A. Sloot},
title = {Effective Pattern Similarity Match for Multidimensional Sequence Data
Sets},
booktitle = {Computational Science - {ICCS} 2007, 7th International Conference
Beijing, China, May 27-30, 2007, Proceedings, Part {I}},
series = {Lecture Notes in Computer Science},
volume = {4487},
pages = {204--212},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72584-8\_27},
doi = {10.1007/978-3-540-72584-8\_27},
timestamp = {Tue, 08 Nov 2022 08:34:32 +0100},
biburl = {https://dblp.org/rec/conf/iccS/LeeK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icip/Kennedy07,
author = {Hugh L. Kennedy},
title = {Two Statistical Measures of Similarity for Object Association and
Tracking in Color Image Sequences},
booktitle = {Proceedings of the International Conference on Image Processing, {ICIP}
2007, September 16-19, 2007, San Antonio, Texas, {USA}},
pages = {477--480},
publisher = {{IEEE}},
year = {2007},
url = {https://doi.org/10.1109/ICIP.2007.4379196},
doi = {10.1109/ICIP.2007.4379196},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icip/Kennedy07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismir/Peeters07,
author = {Geoffroy Peeters},
editor = {Simon Dixon and
David Bainbridge and
Rainer Typke},
title = {Sequence Representation of Music Structure Using Higher-Order Similarity
Matrix and Maximum-Likelihood Approach},
booktitle = {Proceedings of the 8th International Conference on Music Information
Retrieval, {ISMIR} 2007, Vienna, Austria, September 23-27, 2007},
pages = {35--40},
publisher = {Austrian Computer Society},
year = {2007},
url = {http://ismir2007.ismir.net/proceedings/ISMIR2007\_p035\_peeters.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ismir/Peeters07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pakdd/NgNL07,
author = {Hoong Kee Ng and
Kang Ning and
Hon Wai Leong},
editor = {Zhi{-}Hua Zhou and
Hang Li and
Qiang Yang},
title = {A New Approach for Similarity Queries of Biological Sequences in Databases},
booktitle = {Advances in Knowledge Discovery and Data Mining, 11th Pacific-Asia
Conference, {PAKDD} 2007, Nanjing, China, May 22-25, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4426},
pages = {728--736},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-71701-0\_79},
doi = {10.1007/978-3-540-71701-0\_79},
timestamp = {Fri, 03 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/pakdd/NgNL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/riao/HannaF07,
author = {Pierre Hanna and
Pascal Ferraro},
editor = {David A. Evans and
Sadaoki Furui and
Chantal Soul{\'{e}}{-}Dupuy},
title = {Optimizations of Local Edition for Evaluating Similarity Between Monophonic
Musical Sequences},
booktitle = {Computer-Assisted Information Retrieval (Recherche d'Information et
ses Applications) - {RIAO} 2007, 8th International Conference, Carnegie
Mellon University, Pittsburgh, PA, USA, May 30 - June 1, 2007. Proceedings,
{CD-ROM}},
pages = {64--69},
publisher = {{CID}},
year = {2007},
url = {https://dl.acm.org/doi/10.5555/1931390.1931397},
doi = {10.5555/1931390.1931397},
timestamp = {Wed, 04 May 2022 13:02:27 +0200},
biburl = {https://dblp.org/rec/conf/riao/HannaF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wilf/ChenCMJB07,
author = {Zhuo Chen and
Arturo Concepcion and
Anthony Metcalf and
Arokiya Joseph and
Laurence Bohannan},
editor = {Francesco Masulli and
Sushmita Mitra and
Gabriella Pasi},
title = {Smart Sequence Similarity Search(S4) System},
booktitle = {Applications of Fuzzy Sets Theory, 7th International Workshop on Fuzzy
Logic and Applications, {WILF} 2007, Camogli, Italy, July 7-10, 2007,
Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4578},
pages = {643--650},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-73400-0\_82},
doi = {10.1007/978-3-540-73400-0\_82},
timestamp = {Tue, 14 May 2019 10:00:50 +0200},
biburl = {https://dblp.org/rec/conf/wilf/ChenCMJB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-0709-3013,
author = {Patrick H{\'{e}}as and
Mihai Datcu},
title = {Supervised learning on graphs of spatio-temporal similarity in satellite
image sequences},
journal = {CoRR},
volume = {abs/0709.3013},
year = {2007},
url = {http://arxiv.org/abs/0709.3013},
eprinttype = {arXiv},
eprint = {0709.3013},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-0709-3013.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bams/GajewskaL06,
author = {Elzbieta Gajewska and
Jacek Leluk},
title = {An approach to sequence similarity significance estimation},
journal = {Bio Algorithms Med Syst.},
volume = {1},
number = {1-2},
pages = {121--124},
year = {2006},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bams/GajewskaL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HulsenVLG06,
author = {Tim Hulsen and
Jacob de Vlieg and
Jack A. M. Leunissen and
Peter M. A. Groenen},
title = {Testing statistical significance scores of sequence comparison methods
with structure similarity},
journal = {{BMC} Bioinform.},
volume = {7},
pages = {444},
year = {2006},
url = {https://doi.org/10.1186/1471-2105-7-444},
doi = {10.1186/1471-2105-7-444},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HulsenVLG06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/gpb/KambeSNY06,
author = {Taiho Kambe and
Tomoyuki Suzuki and
Masaya Nagao and
Yuko Yamaguchi{-}Iwai},
title = {Sequence Similarity and Functional Relationship Among Eukaryotic {ZIP}
and {CDF} Transporters},
journal = {Genom. Proteom. Bioinform.},
volume = {4},
number = {1},
pages = {1--9},
year = {2006},
url = {https://doi.org/10.1016/S1672-0229(06)60010-7},
doi = {10.1016/S1672-0229(06)60010-7},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/gpb/KambeSNY06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/TodeschiniCMB06,
author = {Roberto Todeschini and
Viviana Consonni and
Andrea Mauri and
Davide Ballabio},
title = {Characterization of {DNA} Primary Sequences by a New Similarity/Diversity
Measure Based on the Partial Ordering},
journal = {J. Chem. Inf. Model.},
volume = {46},
number = {5},
pages = {1905--1911},
year = {2006},
url = {https://doi.org/10.1021/ci060099e},
doi = {10.1021/CI060099E},
timestamp = {Fri, 06 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcisd/TodeschiniCMB06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jfp/Wakeling06,
author = {David Wakeling},
title = {Educational Pearl: Biological sequence similarity},
journal = {J. Funct. Program.},
volume = {16},
number = {1},
pages = {1--12},
year = {2006},
url = {https://doi.org/10.1017/S095679680500571X},
doi = {10.1017/S095679680500571X},
timestamp = {Sat, 27 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jfp/Wakeling06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/DeynekoBWKKBK06,
author = {Igor V. Deyneko and
Bj{\"{o}}rn Bredohl and
Daniel Wesely and
Yulia M. Kalybaeva and
Alexander E. Kel and
Helmut Bl{\"{o}}cker and
Gerhard Kauer},
title = {FeatureScan: revealing property-dependent similarity of nucleotide
sequences},
journal = {Nucleic Acids Res.},
volume = {34},
number = {Web-Server-Issue},
pages = {591--595},
year = {2006},
url = {https://doi.org/10.1093/nar/gkl337},
doi = {10.1093/NAR/GKL337},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/DeynekoBWKKBK06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/NovatchkovaSFES06,
author = {Maria Novatchkova and
Georg Schneider and
Richard Fritz and
Frank Eisenhaber and
Alexander Schleiffer},
title = {DOUTfinder - identification of distant domain outliers using subsignificant
sequence similarity},
journal = {Nucleic Acids Res.},
volume = {34},
number = {Web-Server-Issue},
pages = {214--218},
year = {2006},
url = {https://doi.org/10.1093/nar/gkl332},
doi = {10.1093/NAR/GKL332},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/NovatchkovaSFES06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ausai/NohKKN06,
author = {Sang{-}Kyun Noh and
Yongmin Kim and
DongKook Kim and
Bong{-}Nam Noh},
editor = {Abdul Sattar and
Byeong{-}Ho Kang},
title = {An Efficient Similarity Measure for Clustering of Categorical Sequences},
booktitle = {{AI} 2006: Advances in Artificial Intelligence, 19th Australian Joint
Conference on Artificial Intelligence, Hobart, Australia, December
4-8, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4304},
pages = {372--382},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11941439\_41},
doi = {10.1007/11941439\_41},
timestamp = {Thu, 05 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ausai/NohKKN06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fpga/TranKT06,
author = {Thinh Ngoc Tran and
Surin Kittitornkun and
Shigenori Tomiyama},
editor = {Steven J. E. Wilton and
Andr{\'{e}} DeHon},
title = {Manifold similarity search of {DNA} sequences with reconfigurable
hardware},
booktitle = {Proceedings of the {ACM/SIGDA} 14th International Symposium on Field
Programmable Gate Arrays, {FPGA} 2006, Monterey, California, USA,
February 22-24, 2006},
pages = {231},
publisher = {{ACM}},
year = {2006},
url = {https://doi.org/10.1145/1117201.1117252},
doi = {10.1145/1117201.1117252},
timestamp = {Tue, 06 Nov 2018 16:58:23 +0100},
biburl = {https://dblp.org/rec/conf/fpga/TranKT06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fskd/SimP06,
author = {Jeong Seop Sim and
Soo{-}Jun Park},
editor = {Lipo Wang and
Licheng Jiao and
Guangming Shi and
Xue Li and
Jing Liu},
title = {Transcription Factor Binding Sites Prediction Based on Sequence Similarity},
booktitle = {Fuzzy Systems and Knowledge Discovery, Third International Conference,
{FSKD} 2006, Xi'an, China, September 24-28, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4223},
pages = {1058--1061},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11881599\_131},
doi = {10.1007/11881599\_131},
timestamp = {Tue, 14 May 2019 10:00:54 +0200},
biburl = {https://dblp.org/rec/conf/fskd/SimP06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fusion/LozaMCB06,
author = {Artur Loza and
Lyudmila Mihaylova and
Nishan Canagarajah and
David R. Bull},
title = {Structural Similarity-Based Object Tracking in Video Sequences},
booktitle = {9th International Conference on Information Fusion, {FUSION} 2006,
Florence, Italy, July 10-13, 2006},
pages = {1--6},
publisher = {{IEEE}},
year = {2006},
url = {https://doi.org/10.1109/ICIF.2006.301574},
doi = {10.1109/ICIF.2006.301574},
timestamp = {Wed, 16 Oct 2019 14:14:56 +0200},
biburl = {https://dblp.org/rec/conf/fusion/LozaMCB06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icassp/CaseyS06,
author = {Michael A. Casey and
Malcolm Slaney},
title = {The Importance of Sequences in Musical Similarity},
booktitle = {2006 {IEEE} International Conference on Acoustics Speech and Signal
Processing, {ICASSP} 2006, Toulouse, France, May 14-19, 2006},
pages = {5--8},
publisher = {{IEEE}},
year = {2006},
url = {https://doi.org/10.1109/ICASSP.2006.1661198},
doi = {10.1109/ICASSP.2006.1661198},
timestamp = {Mon, 22 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icassp/CaseyS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icpr/DongWH06,
author = {Qiulei Dong and
Yihong Wu and
Zhanyi Hu},
title = {Gesture Segmentation from a Video Sequence Using Greedy Similarity
Measure},
booktitle = {18th International Conference on Pattern Recognition {(ICPR} 2006),
20-24 August 2006, Hong Kong, China},
pages = {331--334},
publisher = {{IEEE} Computer Society},
year = {2006},
url = {https://doi.org/10.1109/ICPR.2006.608},
doi = {10.1109/ICPR.2006.608},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icpr/DongWH06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ifip12/Bogan-MartaPL06,
author = {Alina Bogan{-}Marta and
Ioannis Pitas and
Kleoniki Lyroudia},
editor = {Max Bramer},
title = {Statistical Method of Context Evaluation for Biological Sequence Similarity},
booktitle = {Artificial Intelligence in Theory and Practice, {IFIP} 19th World
Computer Congress, {TC} 12: {IFIP} {AI} 2006 Stream, August 21-24,
2006, Santiago, Chile},
series = {{IFIP}},
volume = {217},
pages = {99--108},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/978-0-387-34747-9\_11},
doi = {10.1007/978-0-387-34747-9\_11},
timestamp = {Tue, 26 Jun 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ifip12/Bogan-MartaPL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/incdm/Pham06,
author = {Tuan Duc Pham},
editor = {Petra Perner},
title = {Similarity Searching in {DNA} Sequences by Spectral Distortion Measures},
booktitle = {Advances in Data Mining, Applications in Medicine, Web Mining, Marketing,
Image and Signal Mining, 6th Industrial Conference on Data Mining,
{ICDM} 2006, Leipzig, Germany, July 14-15, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4065},
pages = {24--37},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11790853\_3},
doi = {10.1007/11790853\_3},
timestamp = {Tue, 22 Feb 2022 10:29:40 +0100},
biburl = {https://dblp.org/rec/conf/incdm/Pham06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/krmed/QueirozPGLPG06,
author = {Murilo Saraiva de Queiroz and
Francisco Prosdocimi and
Izabela Freire Goertzel and
Francisco Pereira Lobo and
Cassio Pennachin and
Ben Goertzel},
editor = {Olivier Bodenreider},
title = {Inferring Gene Ontology Category Membership via Gene Expression and
Sequence Similarity Data Analysis},
booktitle = {{KR-MED} 2006, Formal Biomedical Knowledge Representation, Proceedings
of the Second International Workshop on Formal Biomedical Knowledge
Representation: "Biomedical Ontology in Action" {(KR-MED} 2006), Collocated
with the 4th International Conference on Formal Ontology in Information
Systems (FOIS-2006), Baltimore, Maryland, USA, November 8, 2006},
series = {{CEUR} Workshop Proceedings},
volume = {222},
publisher = {CEUR-WS.org},
year = {2006},
url = {https://ceur-ws.org/Vol-222/krmed2006-a12.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:31 +0100},
biburl = {https://dblp.org/rec/conf/krmed/QueirozPGLPG06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pricai/PanXWL06,
author = {Haiwei Pan and
Xiaoqin Xie and
Wei Zhang and
Jianzhong Li},
editor = {Qiang Yang and
Geoffrey I. Webb},
title = {Mining Image Sequence Similarity Patterns in Brain Images},
booktitle = {{PRICAI} 2006: Trends in Artificial Intelligence, 9th Pacific Rim
International Conference on Artificial Intelligence, Guilin, China,
August 7-11, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4099},
pages = {965--969},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11801603\_115},
doi = {10.1007/11801603\_115},
timestamp = {Sun, 19 Feb 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/pricai/PanXWL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sac/MitasiunaiteB06,
author = {Ieva Mitasiunaite and
Jean{-}Fran{\c{c}}ois Boulicaut},
editor = {Hisham Haddad},
title = {Looking for monotonicity properties of a similarity constraint on
sequences},
booktitle = {Proceedings of the 2006 {ACM} Symposium on Applied Computing (SAC),
Dijon, France, April 23-27, 2006},
pages = {546--552},
publisher = {{ACM}},
year = {2006},
url = {https://doi.org/10.1145/1141277.1141405},
doi = {10.1145/1141277.1141405},
timestamp = {Tue, 06 Nov 2018 11:06:49 +0100},
biburl = {https://dblp.org/rec/conf/sac/MitasiunaiteB06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/smc/PhamY06,
author = {Tuan D. Pham and
Hong Yan},
title = {{LPC-VQ} based Hidden Markov Models for Similarity Searching in {DNA}
Sequences},
booktitle = {Proceedings of the {IEEE} International Conference on Systems, Man
and Cybernetics, Taipei, Taiwan, October 8-11, 2006},
pages = {1654--1659},
publisher = {{IEEE}},
year = {2006},
url = {https://doi.org/10.1109/ICSMC.2006.384956},
doi = {10.1109/ICSMC.2006.384956},
timestamp = {Wed, 16 Oct 2019 14:14:51 +0200},
biburl = {https://dblp.org/rec/conf/smc/PhamY06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/apin/BhandarkarC05,
author = {Suchendra M. Bhandarkar and
Feng Chen},
title = {Similarity Analysis of Video Sequences Using an Artificial Neural
Network},
journal = {Appl. Intell.},
volume = {22},
number = {3},
pages = {251--275},
year = {2005},
url = {https://doi.org/10.1007/s10791-005-6622-3},
doi = {10.1007/S10791-005-6622-3},
timestamp = {Wed, 17 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/apin/BhandarkarC05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HavgaardLSG05,
author = {Jakob Hull Havgaard and
Rune B. Lyngs{\o} and
Gary D. Stormo and
Jan Gorodkin},
title = {Pairwise local structural alignment of {RNA} sequences with sequence
similarity less than 40{\%}},
journal = {Bioinform.},
volume = {21},
number = {9},
pages = {1815--1824},
year = {2005},
url = {https://doi.org/10.1093/bioinformatics/bti279},
doi = {10.1093/BIOINFORMATICS/BTI279},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HavgaardLSG05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PasselLKBE05,
author = {M. W. J. van Passel and
Angela C. M. Luyf and
Antoine H. C. van Kampen and
Aldert Bart and
A. van der Ende},
title = {delta rho-Web, an online tool to assess composition similarity of
individual nucleic acid sequences},
journal = {Bioinform.},
volume = {21},
number = {13},
pages = {3053--3055},
year = {2005},
url = {https://doi.org/10.1093/bioinformatics/bti460},
doi = {10.1093/BIOINFORMATICS/BTI460},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/PasselLKBE05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GuptaTVVR05,
author = {Kshitiz Gupta and
Dina Thomas and
S. V. Vidya and
Kareenhalli V. Venkatesh and
S. Ramakumar},
title = {Detailed protein sequence alignment based on Spectral Similarity Score
{(SSS)}},
journal = {{BMC} Bioinform.},
volume = {6},
pages = {105},
year = {2005},
url = {https://doi.org/10.1186/1471-2105-6-105},
doi = {10.1186/1471-2105-6-105},
timestamp = {Sun, 31 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/GuptaTVVR05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MaCCSN05,
author = {Qicheng Ma and
Gung{-}Wei Chirn and
Richard Cai and
Joseph D. Szustakowski and
N. R. Nirmala},
title = {Clustering protein sequences with a novel metric transformed from
sequence similarity scores and sequence alignments with neural networks},
journal = {{BMC} Bioinform.},
volume = {6},
pages = {242},
year = {2005},
url = {https://doi.org/10.1186/1471-2105-6-242},
doi = {10.1186/1471-2105-6-242},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/MaCCSN05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WhitneyEU05,
author = {Joe Whitney and
David J. Esteban and
Chris Upton},
title = {Recent Hits Acquired by {BLAST} (ReHAB): {A} tool to identify new
hits in sequence similarity searches},
journal = {{BMC} Bioinform.},
volume = {6},
pages = {23},
year = {2005},
url = {https://doi.org/10.1186/1471-2105-6-23},
doi = {10.1186/1471-2105-6-23},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WhitneyEU05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/candc/WenWLNY05,
author = {Zhi{-}ning Wen and
Ke{-}long Wang and
Meng{-}long Li and
Fu{-}sheng Nie and
Yi Yang},
title = {Analyzing functional similarity of protein sequences with discrete
wavelet transform},
journal = {Comput. Biol. Chem.},
volume = {29},
number = {3},
pages = {220--228},
year = {2005},
url = {https://doi.org/10.1016/j.compbiolchem.2005.04.007},
doi = {10.1016/J.COMPBIOLCHEM.2005.04.007},
timestamp = {Wed, 14 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/candc/WenWLNY05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijait/AghiliAA05,
author = {S. Alireza Aghili and
Divyakant Agrawal and
Amr El Abbadi},
title = {Sequence Similarity Search Using Discrete Fourier and Wavelet Transformation
Techniques},
journal = {Int. J. Artif. Intell. Tools},
volume = {14},
number = {5},
pages = {733--754},
year = {2005},
url = {https://doi.org/10.1142/S0218213005002363},
doi = {10.1142/S0218213005002363},
timestamp = {Tue, 12 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijait/AghiliAA05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijprai/ShanSP05,
author = {Ying Shan and
Harpreet S. Sawhney and
Art Pope},
title = {Clustering multiple image sequences with a sequence-to-sequence similarity
measure},
journal = {Int. J. Pattern Recognit. Artif. Intell.},
volume = {19},
number = {4},
pages = {551--564},
year = {2005},
url = {https://doi.org/10.1142/S0218001405004149},
doi = {10.1142/S0218001405004149},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijprai/ShanSP05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SaeboAMLR05,
author = {Per Eystein S{\ae}b{\o} and
Sten Morten Andersen and
Jon Myrseth and
Jon K. Laerdahl and
Torbj{\o}rn Rognes},
title = {{PARALIGN:} rapid and sensitive sequence similarity searches powered
by parallel computing technology},
journal = {Nucleic Acids Res.},
volume = {33},
number = {Web-Server-Issue},
pages = {535--539},
year = {2005},
url = {https://doi.org/10.1093/nar/gki423},
doi = {10.1093/NAR/GKI423},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SaeboAMLR05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmm/CheungZ05,
author = {Sen{-}Ching S. Cheung and
Avideh Zakhor},
title = {Fast similarity search and clustering of video sequences on the world-wide-web},
journal = {{IEEE} Trans. Multim.},
volume = {7},
number = {3},
pages = {524--537},
year = {2005},
url = {https://doi.org/10.1109/TMM.2005.846906},
doi = {10.1109/TMM.2005.846906},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tmm/CheungZ05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fskd/LeeLC05,
author = {Seok{-}Lyong Lee and
Ju{-}Hong Lee and
Seok{-}Ju Chun},
editor = {Lipo Wang and
Yaochu Jin},
title = {On the Effective Similarity Measures for the Similarity-Based Pattern
Retrieval in Multidimensional Sequence Databases},
booktitle = {Fuzzy Systems and Knowledge Discovery, Second International Conference,
{FSKD} 2005, Changsha, China, August 27-29, 2005, Proceedings, Part
{II}},
series = {Lecture Notes in Computer Science},
volume = {3614},
pages = {762--767},
publisher = {Springer},
year = {2005},
url = {https://doi.org/10.1007/11540007\_94},
doi = {10.1007/11540007\_94},
timestamp = {Tue, 14 May 2019 10:00:54 +0200},
biburl = {https://dblp.org/rec/conf/fskd/LeeLC05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icdar/LeiG05,
author = {Hansheng Lei and
Venu Govindaraju},
title = {Similarity-driven Sequence Classification Based on Support Vector
Machines},
booktitle = {Eighth International Conference on Document Analysis and Recognition
{(ICDAR} 2005), 29 August - 1 September 2005, Seoul, Korea},
pages = {252--261},
publisher = {{IEEE} Computer Society},
year = {2005},
url = {https://doi.org/10.1109/ICDAR.2005.217},
doi = {10.1109/ICDAR.2005.217},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icdar/LeiG05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icnc/YangPZ05,
author = {Wenlu Yang and
Xiongjun Pi and
Liqing Zhang},
editor = {Lipo Wang and
Ke Chen and
Yew{-}Soon Ong},
title = {Similarity Analysis of {DNA} Sequences Based on the Relative Entropy},
booktitle = {Advances in Natural Computation, First International Conference, {ICNC}
2005, Changsha, China, August 27-29, 2005, Proceedings, Part {I}},
series = {Lecture Notes in Computer Science},
volume = {3610},
pages = {1035--1038},
publisher = {Springer},
year = {2005},
url = {https://doi.org/10.1007/11539087\_137},
doi = {10.1007/11539087\_137},
timestamp = {Tue, 14 May 2019 10:00:51 +0200},
biburl = {https://dblp.org/rec/conf/icnc/YangPZ05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ispa/XuCH05,
author = {Xiao{-}hua Xu and
Ling Chen and
Ping He},
editor = {Guihai Chen and
Yi Pan and
Minyi Guo and
Jian Lu},
title = {Fast Sequence Similarity Computing with {LCS} on {LARPBS}},
booktitle = {Parallel and Distributed Processing and Applications - {ISPA} 2005
Workshops, {ISPA} 2005 International Workshops AEPP, ASTD, BIOS, GCIC,
IADS, MASN, SGCA, and WISA, Nanjing, China, November 2-5, 2005, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3759},
pages = {168--175},
publisher = {Springer},
year = {2005},
url = {https://doi.org/10.1007/11576259\_19},
doi = {10.1007/11576259\_19},
timestamp = {Tue, 14 May 2019 10:00:40 +0200},
biburl = {https://dblp.org/rec/conf/ispa/XuCH05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/spire/BackofenHLW05,
author = {Rolf Backofen and
Danny Hermelin and
Gad M. Landau and
Oren Weimann},
editor = {Mariano P. Consens and
Gonzalo Navarro},
title = {Normalized Similarity of {RNA} Sequences},
booktitle = {String Processing and Information Retrieval, 12th International Conference,
{SPIRE} 2005, Buenos Aires, Argentina, November 2-4, 2005, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3772},
pages = {360--369},
publisher = {Springer},
year = {2005},
url = {https://doi.org/10.1007/11575832\_40},
doi = {10.1007/11575832\_40},
timestamp = {Wed, 28 Feb 2024 00:16:41 +0100},
biburl = {https://dblp.org/rec/conf/spire/BackofenHLW05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/DaleviD05,
author = {Daniel Dalevi and
Devdatt P. Dubhashi},
editor = {Rita Casadio and
Gene Myers},
title = {The Peres-Shields Order Estimator for Fixed and Variable Length Markov
Models with Applications to {DNA} Sequence Similarity},
booktitle = {Algorithms in Bioinformatics, 5th International Workshop, {WABI} 2005,
Mallorca, Spain, October 3-6, 2005, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3692},
pages = {291--302},
publisher = {Springer},
year = {2005},
url = {https://doi.org/10.1007/11557067\_24},
doi = {10.1007/11557067\_24},
timestamp = {Tue, 14 May 2019 10:00:40 +0200},
biburl = {https://dblp.org/rec/conf/wabi/DaleviD05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-cs-0501006,
author = {A. Prasad Sistla},
title = {Formal Languages and Algorithms for Similarity based Retrieval from
Sequence Databases},
journal = {CoRR},
volume = {abs/cs/0501006},
year = {2005},
url = {http://arxiv.org/abs/cs/0501006},
eprinttype = {arXiv},
eprint = {cs/0501006},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-cs-0501006.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/is/KimPC04,
author = {Sang{-}Wook Kim and
Sanghyun Park and
Wesley W. Chu},
title = {Efficient processing of similarity search under time warping in sequence
databases: an index-based approach},
journal = {Inf. Syst.},
volume = {29},
number = {5},
pages = {405--420},
year = {2004},
url = {https://doi.org/10.1016/S0306-4379(03)00037-1},
doi = {10.1016/S0306-4379(03)00037-1},
timestamp = {Mon, 13 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/is/KimPC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/LiaoW04,
author = {Bo Liao and
Tian{-}Ming Wang},
title = {Analysis of Similarity/Dissimilarity of {DNA} Sequences Based on Nonoverlapping
Triplets of Nucleotide Bases},
journal = {J. Chem. Inf. Model.},
volume = {44},
number = {5},
pages = {1666--1670},
year = {2004},
url = {https://doi.org/10.1021/ci034271f},
doi = {10.1021/CI034271F},
timestamp = {Fri, 06 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcisd/LiaoW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/pr/BicegoMF04,
author = {Manuele Bicego and
Vittorio Murino and
M{\'{a}}rio A. T. Figueiredo},
title = {Similarity-based classification of sequences using hidden Markov models},
journal = {Pattern Recognit.},
volume = {37},
number = {12},
pages = {2281--2291},
year = {2004},
url = {https://doi.org/10.1016/j.patcog.2004.04.005},
doi = {10.1016/J.PATCOG.2004.04.005},
timestamp = {Mon, 24 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/pr/BicegoMF04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/sigmod/CaoLOT04,
author = {Xia Cao and
Shuai Cheng Li and
Beng Chin Ooi and
Anthony K. H. Tung},
title = {Piers: An Efficient Model for Similarity Search in {DNA} Sequence
Databases},
journal = {{SIGMOD} Rec.},
volume = {33},
number = {2},
pages = {39--44},
year = {2004},
url = {https://doi.org/10.1145/1024694.1024701},
doi = {10.1145/1024694.1024701},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/sigmod/CaoLOT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/AlberGGN04,
author = {Jochen Alber and
Jens Gramm and
Jiong Guo and
Rolf Niedermeier},
title = {Computing the similarity of two sequences with nested arc annotations},
journal = {Theor. Comput. Sci.},
volume = {312},
number = {2-3},
pages = {337--358},
year = {2004},
url = {https://doi.org/10.1016/j.tcs.2003.10.026},
doi = {10.1016/J.TCS.2003.10.026},
timestamp = {Wed, 17 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tcs/AlberGGN04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/IEEEcit/LeiG04,
author = {Hansheng Lei and
Venu Govindaraju},
title = {Regression Time Warping for Similarity Measure of Sequence},
booktitle = {2004 International Conference on Computer and Information Technology
{(CIT} 2004), 14-16 September 2004, Wuhan, China},
pages = {826--830},
publisher = {{IEEE} Computer Society},
year = {2004},
url = {https://doi.org/10.1109/CIT.2004.1357297},
doi = {10.1109/CIT.2004.1357297},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/IEEEcit/LeiG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibe/AghiliSAA04,
author = {S. Alireza Aghili and
Ozgur D. Sahin and
Divyakant Agrawal and
Amr El Abbadi},
title = {Efficient Filtration of Sequence Similarity Search Through Singular
Value Decomposition},
booktitle = {4th {IEEE} International Symposium on BioInformatics and BioEngineering
{(BIBE} 2004), 19-21 March 2004, Taichung, Taiwan},
pages = {403--410},
publisher = {{IEEE} Computer Society},
year = {2004},
url = {https://doi.org/10.1109/BIBE.2004.1317371},
doi = {10.1109/BIBE.2004.1317371},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibe/AghiliSAA04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cibcb/VolkertS04,
author = {L. Gwenn Volkert and
Deborah Stoffer},
title = {A comparison of sequence alignment algorithms for measuring secondary
structure similarity},
booktitle = {Proceedings of the 2004 {IEEE} Symposium on Computational Intelligence
in Bioinformatics and Computational Biology, {CIBCB} 2004, La Jolla,
CA, USA, October 7-8, 2004},
pages = {182--189},
publisher = {{IEEE}},
year = {2004},
url = {https://doi.org/10.1109/CIBCB.2004.1393952},
doi = {10.1109/CIBCB.2004.1393952},
timestamp = {Wed, 16 Oct 2019 14:14:48 +0200},
biburl = {https://dblp.org/rec/conf/cibcb/VolkertS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dagstuhl/YamamotoO04,
author = {Akihiro Yamamoto and
Akira Ogiso},
editor = {Gunter Grieser and
Yuzuru Tanaka},
title = {Similarity of Documents Based on the Vector Sequence Model},
booktitle = {Intuitive Human Interfaces for Organizing and Accessing Intellectual
Assets, International Workshop, Dagstuhl Castle, Germany, March 1-5,
2004, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {3359},
pages = {233--242},
publisher = {Springer},
year = {2004},
url = {https://doi.org/10.1007/978-3-540-32279-5\_16},
doi = {10.1007/978-3-540-32279-5\_16},
timestamp = {Tue, 14 May 2019 10:00:51 +0200},
biburl = {https://dblp.org/rec/conf/dagstuhl/YamamotoO04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dasfaa/YiR04,
author = {Byoung{-}Kee Yi and
Jong{-}Won Roh},
editor = {Yoon{-}Joon Lee and
Jianzhong Li and
Kyu{-}Young Whang and
Doheon Lee},
title = {Similarity Search for Interval Time Sequences},
booktitle = {Database Systems for Advances Applications, 9th International Conference,
{DASFAA} 2004, Jeju Island, Korea, March 17-19, 2004, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2973},
pages = {232--243},
publisher = {Springer},
year = {2004},
url = {https://doi.org/10.1007/978-3-540-24571-1\_21},
doi = {10.1007/978-3-540-24571-1\_21},
timestamp = {Tue, 14 May 2019 10:00:44 +0200},
biburl = {https://dblp.org/rec/conf/dasfaa/YiR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iastedSEA/CaiCL04,
author = {Keke Cai and
Chun Chen and
Huaizhong Lin},
editor = {M. H. Hamza},
title = {Efficient similarity matching for categorical sequence based on dynamic
partition},
booktitle = {Proceedings of the {IASTED} Conference on Software Engineering and
Applications, November 9-11, 2004, MIT, Cambridge, MA, {USA}},
pages = {13--18},
publisher = {{IASTED/ACTA} Press},
year = {2004},
timestamp = {Tue, 23 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/iastedSEA/CaiCL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ijit/MohsenZSH04,
author = {Mubarak Saif Mohsen and
Zurinahni Zainol and
Rosalina Abdul Salam and
Wahidah Husain},
editor = {Ali Okatan},
title = {Parallezation Protein Sequence Similarity Algorithms using Remote
Method Interface},
booktitle = {International Conference on Computational Intelligence, {ICCI} 2004,
December 17-19, 2004, Istanbul, Turkey, Proceedings},
pages = {97--100},
publisher = {International Computational Intelligence Society},
year = {2004},
timestamp = {Tue, 01 Feb 2005 08:38:09 +0100},
biburl = {https://dblp.org/rec/conf/ijit/MohsenZSH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/ZhaoGB04,
author = {Rongkai Zhao and
Michael Gabriel and
Geneva G. Belford},
title = {An Extendable Registration Similarity Metric for Anatomical Image
Sequence Alignment},
booktitle = {Proceedings of the 2004 {IEEE} International Symposium on Biomedical
Imaging: From Nano to Macro, Arlington, VA, USA, 15-18 April 2004},
pages = {736--739},
publisher = {{IEEE}},
year = {2004},
url = {https://doi.org/10.1109/ISBI.2004.1398643},
doi = {10.1109/ISBI.2004.1398643},
timestamp = {Wed, 04 Oct 2023 16:23:55 +0200},
biburl = {https://dblp.org/rec/conf/isbi/ZhaoGB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ssdbm/KontakiP04,
author = {Maria Kontaki and
Apostolos Papadopoulos},
title = {Efficient Similarity Search in Streaming Time Sequences},
booktitle = {Proceedings of the 16th International Conference on Scientific and
Statistical Database Management {(SSDBM} 2004), 21-23 June 2004, Santorini
Island, Greece},
pages = {63--72},
publisher = {{IEEE} Computer Society},
year = {2004},
url = {https://doi.ieeecomputersociety.org/10.1109/SSDBM.2004.33},
doi = {10.1109/SSDBM.2004.33},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ssdbm/KontakiP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LordSBG03,
author = {Phillip W. Lord and
Robert D. Stevens and
Andy Brass and
Carole A. Goble},
title = {Investigating Semantic Similarity Measures Across the Gene Ontology:
The Relationship Between Sequence and Annotation},
journal = {Bioinform.},
volume = {19},
number = {10},
pages = {1275--1283},
year = {2003},
url = {https://doi.org/10.1093/bioinformatics/btg153},
doi = {10.1093/BIOINFORMATICS/BTG153},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LordSBG03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ParkinsonB03,
author = {John Parkinson and
Mark L. Blaxter},
title = {SimiTri-visualizing similarity relationships for groups of sequences},
journal = {Bioinform.},
volume = {19},
number = {3},
pages = {390--395},
year = {2003},
url = {https://doi.org/10.1093/bioinformatics/btf870},
doi = {10.1093/BIOINFORMATICS/BTF870},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ParkinsonB03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CampanellaBS03,
author = {James J. Campanella and
Ledion Bitincka and
John Smalley},
title = {MatGAT: An application that generates similarity/identity matrices
using protein or {DNA} sequences},
journal = {{BMC} Bioinform.},
volume = {4},
pages = {29},
year = {2003},
url = {https://doi.org/10.1186/1471-2105-4-29},
doi = {10.1186/1471-2105-4-29},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CampanellaBS03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijig/ParkC03,
author = {Sanghyun Park and
Wesley W. Chu},
title = {Similarity-Based Subsequence Search in Image Sequence Databases},
journal = {Int. J. Image Graph.},
volume = {3},
number = {1},
pages = {31--54},
year = {2003},
url = {https://doi.org/10.1142/S0219467803000907},
doi = {10.1142/S0219467803000907},
timestamp = {Tue, 24 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ijig/ParkC03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/LiaoN03,
author = {Li Liao and
William Stafford Noble},
title = {Combining Pairwise Sequence Similarity and Support Vector Machines
for Detecting Remote Protein Evolutionary and Structural Relationships},
journal = {J. Comput. Biol.},
volume = {10},
number = {6},
pages = {857--868},
year = {2003},
url = {https://doi.org/10.1089/106652703322756113},
doi = {10.1089/106652703322756113},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/LiaoN03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/FoissacBMCS03,
author = {Sylvain Foissac and
Philippe Bardou and
Annick Moisan and
Marie{-}Jos{\'{e}}e Cros and
Thomas Schiex},
title = {EUG{\`{E}}NE'HOM: a generic similarity-based gene finder using multiple
homologous sequences},
journal = {Nucleic Acids Res.},
volume = {31},
number = {13},
pages = {3742--3745},
year = {2003},
url = {https://doi.org/10.1093/nar/gkg586},
doi = {10.1093/NAR/GKG586},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/FoissacBMCS03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/SunOF03,
author = {Hong Sun and
Ozgur Ozturk and
Hakan Ferhatosmanoglu},
title = {CoMRI: {A} Compressed Multi-Resolution Index Structure for Sequence
Similarity Queries},
booktitle = {2nd {IEEE} Computer Society Bioinformatics Conference, {CSB} 2003,
Stanford, CA, USA, August 11-14, 2003},
pages = {553--559},
publisher = {{IEEE} Computer Society},
year = {2003},
url = {https://doi.org/10.1109/CSB.2003.1227406},
doi = {10.1109/CSB.2003.1227406},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/csb/SunOF03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/WuLSH03,
author = {Kuen{-}Pin Wu and
Hsin{-}Nan Lin and
Ting{-}Yi Sung and
Wen{-}Lian Hsu},
title = {A New Similarity Measure among Protein Sequences},
booktitle = {2nd {IEEE} Computer Society Bioinformatics Conference, {CSB} 2003,
Stanford, CA, USA, August 11-14, 2003},
pages = {347--352},
publisher = {{IEEE} Computer Society},
year = {2003},
url = {https://doi.org/10.1109/CSB.2003.1227335},
doi = {10.1109/CSB.2003.1227335},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/csb/WuLSH03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/ZhouLG03,
author = {Jianping Zhou and
Gary Livingston and
Georges G. Grinstein},
title = {Automatic Parameter Selection for Sequence Similarity Search},
booktitle = {2nd {IEEE} Computer Society Bioinformatics Conference, {CSB} 2003,
Stanford, CA, USA, August 11-14, 2003},
pages = {530--531},
publisher = {{IEEE} Computer Society},
year = {2003},
url = {https://doi.org/10.1109/CSB.2003.1227397},
doi = {10.1109/CSB.2003.1227397},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/csb/ZhouLG03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eucc/Wise03,
author = {Michael J. Wise},
title = {Alignment algorithms revisited: Alignment algorithms for low similarity
protein sequence comparisons},
booktitle = {7th European Control Conference, {ECC} 2003, Cambridge, UK, September
1-4, 2003},
pages = {3386--3391},
publisher = {{IEEE}},
year = {2003},
url = {https://doi.org/10.23919/ECC.2003.7086563},
doi = {10.23919/ECC.2003.7086563},
timestamp = {Fri, 05 Mar 2021 13:39:31 +0100},
biburl = {https://dblp.org/rec/conf/eucc/Wise03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismse/TsaiL03,
author = {Tian{-}Haw Tsai and
Suh{-}Yin Lee},
title = {Simsearcher: a local similarity search engine for biological sequence
databases},
booktitle = {Fifth International Symposium on Multimedia Software Engineering,
{ISMSE} 2003, Taichung, Taiwan, December 10-12, 2003},
pages = {305--312},
publisher = {{IEEE} Computer Society},
year = {2003},
url = {https://doi.org/10.1109/MMSE.2003.1254456},
doi = {10.1109/MMSE.2003.1254456},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ismse/TsaiL03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/mldm/BicegoMF03,
author = {Manuele Bicego and
Vittorio Murino and
M{\'{a}}rio A. T. Figueiredo},
editor = {Petra Perner and
Azriel Rosenfeld},
title = {Similarity-Based Clustering of Sequences Using Hidden Markov Models},
booktitle = {Machine Learning and Data Mining in Pattern Recognition, Third International
Conference, {MLDM} 2003, Leipzig, Germany, July 5-7, 2003, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2734},
pages = {86--95},
publisher = {Springer},
year = {2003},
url = {https://doi.org/10.1007/3-540-45065-3\_8},
doi = {10.1007/3-540-45065-3\_8},
timestamp = {Tue, 14 May 2019 10:00:53 +0200},
biburl = {https://dblp.org/rec/conf/mldm/BicegoMF03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KarwathK02,
author = {Andreas Karwath and
Ross D. King},
title = {Homology Induction: the use of machine learning to improve sequence
similarity searches},
journal = {{BMC} Bioinform.},
volume = {3},
pages = {11},
year = {2002},
url = {https://doi.org/10.1186/1471-2105-3-11},
doi = {10.1186/1471-2105-3-11},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KarwathK02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/candc/CometH02,
author = {Jean{-}Paul Comet and
Jacques Henry},
title = {Pairwise Sequence Alignment using a {PROSITE} Pattern-derived Similarity
Score},
journal = {Comput. Chem.},
volume = {26},
number = {5},
pages = {421--436},
year = {2002},
url = {https://doi.org/10.1016/S0097-8485(02)00005-0},
doi = {10.1016/S0097-8485(02)00005-0},
timestamp = {Mon, 18 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/candc/CometH02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cikm/SistlaHC02,
author = {A. Prasad Sistla and
Tao Hu and
Vikas Chowdhry},
title = {Similarity based retrieval from sequence databases using automata
as queries},
booktitle = {Proceedings of the 2002 {ACM} {CIKM} International Conference on Information
and Knowledge Management, McLean, VA, USA, November 4-9, 2002},
pages = {237--244},
publisher = {{ACM}},
year = {2002},
url = {https://doi.org/10.1145/584792.584833},
doi = {10.1145/584792.584833},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cikm/SistlaHC02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/DudoignonGHR02,
author = {Lorie Dudoignon and
Eric Gl{\'{e}}met and
Hendrik Cornelis Heus and
Mathieu Raffinot},
title = {High Similarity Sequence Comparison in Clustering Large Sequence Databases},
booktitle = {1st {IEEE} Computer Society Bioinformatics Conference, {CSB} 2002,
Stanford, CA, USA, August 14-16, 2002},
pages = {228--236},
publisher = {{IEEE} Computer Society},
year = {2002},
url = {https://doi.org/10.1109/CSB.2002.1039345},
doi = {10.1109/CSB.2002.1039345},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/csb/DudoignonGHR02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fsttcs/Sistla02,
author = {A. Prasad Sistla},
editor = {Manindra Agrawal and
Anil Seth},
title = {Formal Languages and Algorithms for Similarity Based Retrieval from
Sequence Databases},
booktitle = {{FST} {TCS} 2002: Foundations of Software Technology and Theoretical
Computer Science, 22nd Conference Kanpur, India, December 12-14, 2002,
Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2556},
pages = {324--335},
publisher = {Springer},
year = {2002},
url = {https://doi.org/10.1007/3-540-36206-1\_29},
doi = {10.1007/3-540-36206-1\_29},
timestamp = {Tue, 14 May 2019 10:00:51 +0200},
biburl = {https://dblp.org/rec/conf/fsttcs/Sistla02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/LiaoN02,
author = {Li Liao and
William Stafford Noble},
editor = {Gene Myers and
Sridhar Hannenhalli and
David Sankoff and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Combining pairwise sequence similarity and support vector machines
for remote protein homology detection},
booktitle = {Proceedings of the Sixth Annual International Conference on Computational
Biology, {RECOMB} 2002, Washington, DC, USA, April 18-21, 2002},
pages = {225--232},
publisher = {{ACM}},
year = {2002},
url = {https://doi.org/10.1145/565196.565225},
doi = {10.1145/565196.565225},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/LiaoN02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ssdbm/KahveciSG02,
author = {Tamer Kahveci and
Ambuj K. Singh and
Aliekber G{\"{u}}rel},
title = {Similarity Searching for Multi-Attribute Sequences},
booktitle = {Proceedings of the 14th International Conference on Scientific and
Statistical Database Management, July 24-26, 2002, Edinburgh, Scotland,
{UK}},
pages = {175--184},
publisher = {{IEEE} Computer Society},
year = {2002},
url = {https://doi.org/10.1109/SSDM.2002.1029718},
doi = {10.1109/SSDM.2002.1029718},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ssdbm/KahveciSG02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MironovNG01,
author = {Andrey A. Mironov and
Pavel S. Novichkov and
Mikhail S. Gelfand},
title = {Pro-Frame: similarity-based gene recognition in eukaryotic {DNA} sequences
with errors},
journal = {Bioinform.},
volume = {17},
number = {1},
pages = {13--15},
year = {2001},
url = {https://doi.org/10.1093/bioinformatics/17.1.13},
doi = {10.1093/BIOINFORMATICS/17.1.13},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MironovNG01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ibmrd/FloratosRPG01,
author = {Aris Floratos and
Isidore Rigoutsos and
Laxmi Parida and
Yuan Gao},
title = {{DELPHI:} {A} pattern-based method for detecting sequence similarity},
journal = {{IBM} J. Res. Dev.},
volume = {45},
number = {3},
pages = {455--474},
year = {2001},
url = {https://doi.org/10.1147/rd.453.0455},
doi = {10.1147/RD.453.0455},
timestamp = {Fri, 13 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ibmrd/FloratosRPG01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icde/KimPC01,
author = {Sang{-}Wook Kim and
Sanghyun Park and
Wesley W. Chu},
editor = {Dimitrios Georgakopoulos and
Alexander Buchmann},
title = {An Index-Based Approach for Similarity Search Supporting Time Warping
in Large Sequence Databases},
booktitle = {Proceedings of the 17th International Conference on Data Engineering,
April 2-6, 2001, Heidelberg, Germany},
pages = {607--614},
publisher = {{IEEE} Computer Society},
year = {2001},
url = {https://doi.org/10.1109/ICDE.2001.914875},
doi = {10.1109/ICDE.2001.914875},
timestamp = {Fri, 15 Mar 2024 12:30:44 +0100},
biburl = {https://dblp.org/rec/conf/icde/KimPC01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/BiluL01,
author = {Yonatan Bilu and
Michal Linial},
editor = {Thomas Lengauer},
title = {On the predictive power of sequence similarity in yeast},
booktitle = {Proceedings of the Fifth Annual International Conference on Computational
Biology, {RECOMB} 2001, Montr{\'{e}}al, Qu{\'{e}}bec, Canada,
April 22-25, 2001},
pages = {39--48},
publisher = {{ACM}},
year = {2001},
url = {https://doi.org/10.1145/369133.369168},
doi = {10.1145/369133.369168},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/BiluL01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NishikawaOI00,
author = {Tetsuo Nishikawa and
Toshio Ota and
Takao Isogai},
title = {Prediction whether a human cDNA sequence contains initiation codon
by combining statistical information and similarity with protein sequences},
journal = {Bioinform.},
volume = {16},
number = {11},
pages = {960--967},
year = {2000},
url = {https://doi.org/10.1093/bioinformatics/16.11.960},
doi = {10.1093/BIOINFORMATICS/16.11.960},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NishikawaOI00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/DrasdoHL00,
author = {Dirk Drasdo and
Terence Hwa and
Michael L{\"{a}}ssig},
title = {Scaling Laws and Similarity Detection in Sequence Alignment with Gaps},
journal = {J. Comput. Biol.},
volume = {7},
number = {1-2},
pages = {115--141},
year = {2000},
url = {https://doi.org/10.1089/10665270050081414},
doi = {10.1089/10665270050081414},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/DrasdoHL00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/RandiV00,
author = {Milan Randic and
Marjan Vracko},
title = {On the Similarity of {DNA} Primary Sequences},
journal = {J. Chem. Inf. Comput. Sci.},
volume = {40},
number = {3},
pages = {599--606},
year = {2000},
url = {https://doi.org/10.1021/ci9901082},
doi = {10.1021/CI9901082},
timestamp = {Thu, 14 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcisd/RandiV00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jei/ChiRSB00,
author = {Ed H. Chi and
John Riedl and
Elizabeth Shoop and
Phillip Barry},
title = {Novel visualization method for biological sequence similarity reports},
journal = {J. Electronic Imaging},
volume = {9},
number = {4},
pages = {394--403},
year = {2000},
url = {https://doi.org/10.1117/1.1289351},
doi = {10.1117/1.1289351},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jei/ChiRSB00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jss/HuangDLK00,
author = {Po{-}Whei Huang and
S. K. Dai and
Phen{-}Lan Lin and
R. T. Kuo},
title = {Similarity retrieval based on group bounding and angle sequence matching
in shape database systems},
journal = {J. Syst. Softw.},
volume = {54},
number = {1},
pages = {9--16},
year = {2000},
url = {https://doi.org/10.1016/S0164-1212(00)00022-4},
doi = {10.1016/S0164-1212(00)00022-4},
timestamp = {Mon, 24 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jss/HuangDLK00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icde/LeeCKLC00,
author = {Seok{-}Lyong Lee and
Seok{-}Ju Chun and
Deok{-}Hwan Kim and
Ju{-}Hong Lee and
Chin{-}Wan Chung},
editor = {David B. Lomet and
Gerhard Weikum},
title = {Similarity Search for Multidimensional Data Sequences},
booktitle = {Proceedings of the 16th International Conference on Data Engineering,
San Diego, California, USA, February 28 - March 3, 2000},
pages = {599--608},
publisher = {{IEEE} Computer Society},
year = {2000},
url = {https://doi.org/10.1109/ICDE.2000.839473},
doi = {10.1109/ICDE.2000.839473},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icde/LeeCKLC00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KlingenhoffFQW99,
author = {Andreas Klingenhoff and
Kornelie Frech and
Kerstin Quandt and
Thomas Werner},
title = {Functional promoter modules can be detected by formal models independent
of overall nucleotide sequence similarity},
journal = {Bioinform.},
volume = {15},
number = {3},
pages = {180--186},
year = {1999},
url = {https://doi.org/10.1093/bioinformatics/15.3.180},
doi = {10.1093/BIOINFORMATICS/15.3.180},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KlingenhoffFQW99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PeggB99,
author = {Scott C.{-}H. Pegg and
Patricia C. Babbitt},
title = {Shotgun: getting more from sequence similarity searches},
journal = {Bioinform.},
volume = {15},
number = {9},
pages = {729--740},
year = {1999},
url = {https://doi.org/10.1093/bioinformatics/15.9.729},
doi = {10.1093/BIOINFORMATICS/15.9.729},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PeggB99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WrightSA99,
author = {W. Wright and
Philip Scordis and
Terri K. Attwood},
title = {{BLAST} {PRINTS} - alternative perspectives on sequence similarity},
journal = {Bioinform.},
volume = {15},
number = {6},
pages = {523--524},
year = {1999},
url = {https://doi.org/10.1093/bioinformatics/15.6.523},
doi = {10.1093/BIOINFORMATICS/15.6.523},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WrightSA99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/RaychaudhuryN99,
author = {Chandan Raychaudhury and
Ashesh Nandy},
title = {Indexing Scheme and Similarity Measures for Macromolecular Sequences},
journal = {J. Chem. Inf. Comput. Sci.},
volume = {39},
number = {2},
pages = {243--247},
year = {1999},
url = {https://doi.org/10.1021/ci980077v},
doi = {10.1021/CI980077V},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcisd/RaychaudhuryN99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/kais/LiYC99,
author = {Chung{-}Sheng Li and
Philip S. Yu and
Vittorio Castelli},
title = {Scan: {A} Hierarchical Algorithm for Similarity Search in Databases
Consisting of Long Sequences},
journal = {Knowl. Inf. Syst.},
volume = {1},
number = {2},
pages = {229--256},
year = {1999},
url = {https://doi.org/10.1007/BF03325099},
doi = {10.1007/BF03325099},
timestamp = {Sat, 10 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/kais/LiYC99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dawak/MannilaM99,
author = {Heikki Mannila and
Pirjo Moen},
editor = {Mukesh K. Mohania and
A Min Tjoa},
title = {Similarity between Event Types in Sequences},
booktitle = {Data Warehousing and Knowledge Discovery, First International Conference,
DaWaK '99, Florence, Italy, August 30 - September 1, 1999, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1676},
pages = {271--280},
publisher = {Springer},
year = {1999},
url = {https://doi.org/10.1007/3-540-48298-9\_29},
doi = {10.1007/3-540-48298-9\_29},
timestamp = {Tue, 29 Dec 2020 18:32:27 +0100},
biburl = {https://dblp.org/rec/conf/dawak/MannilaM99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/RodiM99,
author = {Diane J. Rodi and
Lee Makowski},
editor = {Russ B. Altman and
A. Keith Dunker and
Lawrence Hunter and
Teri E. Klein},
title = {Similarity Between the Sequences of Taxol-Selected Peptides and the
Disordered Loop of the Anti-Apoptotic Protein, {BCL-2}},
booktitle = {Proceedings of the 4th Pacific Symposium on Biocomputing, {PSB} 1999,
The Orchid at Mauna Lani, Big Island of Hawaii, USA, January 4-9,
1999},
pages = {532--541},
year = {1999},
url = {http://psb.stanford.edu/psb-online/proceedings/psb99/Rodi.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/psb/RodiM99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/spieSR/BaiXS99,
author = {Xuesheng Bai and
Guangyou Xu and
Yuanchun Shi},
editor = {Minerva M. Yeung and
Boon{-}Lock Yeo and
Charles A. Bouman},
title = {Similarity sequence and its application in shot organization},
booktitle = {Storage and Retrieval for Image and Video Databases VII, San Jose,
CA, USA, January 26-29, 1999},
series = {{SPIE} Proceedings},
volume = {3656},
pages = {208--219},
publisher = {{SPIE}},
year = {1999},
url = {https://doi.org/10.1117/12.333841},
doi = {10.1117/12.333841},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/spieSR/BaiXS99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AgarwalS98,
author = {Pankaj Agarwal and
David J. States},
title = {Comparative accuracy of methods for protein sequence similarity search},
journal = {Bioinform.},
volume = {14},
number = {1},
pages = {40--47},
year = {1998},
url = {https://doi.org/10.1093/bioinformatics/14.1.40},
doi = {10.1093/BIOINFORMATICS/14.1.40},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AgarwalS98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GracyA98,
author = {J{\'{e}}r{\^{o}}me Gracy and
P. Argos},
title = {Automated protein sequence database classification. I. Integration
of compositional similarity search, local similarity search, and multiple
sequence alignment},
journal = {Bioinform.},
volume = {14},
number = {2},
pages = {164--173},
year = {1998},
url = {https://doi.org/10.1093/bioinformatics/14.2.164},
doi = {10.1093/BIOINFORMATICS/14.2.164},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GracyA98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/VincensBACBH98,
author = {Pierre Vincens and
L. Buffat and
C{\'{e}}cile Andr{\'{e}} and
Jean{-}Paul Chevrolat and
Jean{-}Fran{\c{c}}ois Boisvieux and
Serge A. Hazout},
title = {A strategy for finding regions of similarity in complete genome sequences},
journal = {Bioinform.},
volume = {14},
number = {8},
pages = {715--725},
year = {1998},
url = {http://bioinformatics.oxfordjournals.org/content/14/8/715.abstract},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/VincensBACBH98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gcb/TuliS98,
author = {Mary Ann Tuli and
Peter Sterk},
title = {The {EMBL} Nucleotide Sequence Database at the European Bioinformatics
Institute {(EBI):} Sequence Similarity Searching {\&} Database
query/retrieval},
booktitle = {Proceedings of the German Conference on Bioinformatics, {GCB} 1998,
University of Cologne, Germany, October 1998},
publisher = {Oxford University Press},
year = {1998},
timestamp = {Fri, 02 Aug 2019 15:48:14 +0200},
biburl = {https://dblp.org/rec/conf/gcb/TuliS98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iwmmdbms/AdjerohLK98,
author = {Donald A. Adjeroh and
Moon{-}Chuen Lee and
Irwin King},
title = {A Distance Measure for Video Sequence Similarity Matching},
booktitle = {Proceedings of the International Workshop on Multi-Media Database
Management Systems, {IW-MMDBMS} 1998, August 5-7, 1998, Dayton, OH,
{USA}},
pages = {72--79},
publisher = {{IEEE} Computer Society},
year = {1998},
timestamp = {Wed, 07 Aug 2019 09:11:57 +0200},
biburl = {https://dblp.org/rec/conf/iwmmdbms/AdjerohLK98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iwmmdbms/ShanL98,
author = {Man{-}Kwan Shan and
Suh{-}Yin Lee},
title = {Content-based Video Retrieval Based on Similarity of Frame Sequence},
booktitle = {Proceedings of the International Workshop on Multi-Media Database
Management Systems, {IW-MMDBMS} 1998, August 5-7, 1998, Dayton, OH,
{USA}},
pages = {90--97},
publisher = {{IEEE} Computer Society},
year = {1998},
timestamp = {Wed, 07 Aug 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/iwmmdbms/ShanL98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/minar/AdjerohKL98,
author = {Donald A. Adjeroh and
Irwin King and
Moon{-}Chuen Lee},
editor = {Horace Ho{-}Shing Ip and
Arnold W. M. Smeulders},
title = {Video Sequence Similarity Matching},
booktitle = {Multimedia Information Analysis and Retrieval, {IAPR} International
Workshop, MINAR'98, Hong Kong, China, August 13-14, 1998, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1464},
pages = {80--95},
publisher = {Springer},
year = {1998},
url = {https://doi.org/10.1007/BFb0016490},
doi = {10.1007/BFB0016490},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/minar/AdjerohKL98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/HwaL98,
author = {Terence Hwa and
Michael L{\"{a}}ssig},
editor = {Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Optimal detection of sequence similarity by local alignment},
booktitle = {Proceedings of the Second Annual International Conference on Research
in Computational Molecular Biology, {RECOMB} 1998, New York, NY, USA,
March 22-25, 1998},
pages = {109--116},
publisher = {{ACM}},
year = {1998},
url = {https://doi.org/10.1145/279069.279103},
doi = {10.1145/279069.279103},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/HwaL98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/LiuBS98,
author = {Rongxiang Liu and
Thomas W. Blackwell and
David J. States},
editor = {Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {A structure based similarity measure for nucleic acid sequence comparison},
booktitle = {Proceedings of the Second Annual International Conference on Research
in Computational Molecular Biology, {RECOMB} 1998, New York, NY, USA,
March 22-25, 1998},
pages = {173--181},
publisher = {{ACM}},
year = {1998},
url = {https://doi.org/10.1145/279069.279112},
doi = {10.1145/279069.279112},
timestamp = {Mon, 13 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/LiuBS98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/speech/HernandoNM97,
author = {Javier Hernando and
Climent Nadeu and
Jos{\'{e}} B. Mari{\~{n}}o},
title = {Speech recognition in a noisy car environment based on {LP} of the
one-sided autocorrelation sequence and robust similarity measuring
techniques},
journal = {Speech Commun.},
volume = {21},
number = {1-2},
pages = {17--31},
year = {1997},
url = {https://doi.org/10.1016/S0167-6393(96)00074-X},
doi = {10.1016/S0167-6393(96)00074-X},
timestamp = {Sat, 22 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/speech/HernandoNM97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/JardinsKKLO97,
author = {Marie desJardins and
Peter D. Karp and
Markus Krummenacker and
Thomas J. Lee and
Christos A. Ouzounis},
editor = {Terry Gaasterland and
Peter D. Karp and
Kevin Karplus and
Christos A. Ouzounis and
Chris Sander and
Alfonso Valencia},
title = {Prediction of Enzyme Classification from Protein Sequence without
the Use of Sequence Similarity},
booktitle = {Proceedings of the 5th International Conference on Intelligent Systems
for Molecular Biology, Halkidiki, Greece, June 21-26, 1997},
pages = {92--99},
publisher = {{AAAI}},
year = {1997},
url = {http://www.aaai.org/Library/ISMB/1997/ismb97-014.php},
timestamp = {Thu, 13 Dec 2012 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ismb/JardinsKKLO97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sequences/FaloutsosJMM97,
author = {Christos Faloutsos and
H. V. Jagadish and
Alberto O. Mendelzon and
Tova Milo},
editor = {Bruno Carpentieri and
Alfredo De Santis and
Ugo Vaccaro and
James A. Storer},
title = {A signature technique for similarity-based queries},
booktitle = {Compression and Complexity of {SEQUENCES} 1997, Positano, Amalfitan
Coast, Salerno, Italy, June 11-13, 1997, Proceedings},
pages = {2--20},
publisher = {{IEEE}},
year = {1997},
url = {https://doi.org/10.1109/SEQUEN.1997.666899},
doi = {10.1109/SEQUEN.1997.666899},
timestamp = {Wed, 16 Oct 2019 14:14:56 +0200},
biburl = {https://dblp.org/rec/conf/sequences/FaloutsosJMM97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/time/MannilaR97,
author = {Heikki Mannila and
Pirjo Ronkainen},
title = {Similarity of Event Sequences},
booktitle = {4th International Workshop on Temporal Representation and Reasoning,
{TIME} '97, Daytona Beach, Florida, USA, May 10-11, 1997},
pages = {136--139},
publisher = {{IEEE} Computer Society},
year = {1997},
url = {https://doi.org/10.1109/TIME.1997.600793},
doi = {10.1109/TIME.1997.600793},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/time/MannilaR97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Labesse96,
author = {Gilles Labesse},
title = {MulBlast 1.0: a multiple alignment of {BLAST} output to boost protein
sequence similarity analysis},
journal = {Comput. Appl. Biosci.},
volume = {12},
number = {6},
pages = {463--467},
year = {1996},
url = {https://doi.org/10.1093/bioinformatics/12.6.463},
doi = {10.1093/BIOINFORMATICS/12.6.463},
timestamp = {Fri, 15 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/Labesse96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gcb/SchneckenerS96,
author = {Sebastian Schneckener and
Dietmar Schomburg},
title = {Optimal Gap Penalties and Similarity Matrices for Sequence Alignment},
booktitle = {Proceedings of the German Conference on Bioinformatics, {GCB} 1996,
Leipzig, Germany, September 30 - October 2, 1996},
pages = {292--293},
year = {1996},
timestamp = {Sat, 07 Sep 2019 11:59:23 +0200},
biburl = {https://dblp.org/rec/conf/gcb/SchneckenerS96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gcb/SeledtsovWKM96,
author = {Igor A. Seledtsov and
Yuri I. Wolf and
Dmitry Korshunov and
Kira S. Makarova},
title = {Sequence Similarity Significance: Computer Simulations and Analytically
obtained Bounds},
booktitle = {Proceedings of the German Conference on Bioinformatics, {GCB} 1996,
Leipzig, Germany, September 30 - October 2, 1996},
pages = {305--307},
year = {1996},
timestamp = {Fri, 20 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/gcb/SeledtsovWKM96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icde/LiYC96,
author = {Chung{-}Sheng Li and
Philip S. Yu and
Vittorio Castelli},
editor = {Stanley Y. W. Su},
title = {HierarchyScan: {A} Hierarchical Similarity Search Algorithm for Databases
of Long Sequences},
booktitle = {Proceedings of the Twelfth International Conference on Data Engineering,
February 26 - March 1, 1996, New Orleans, Louisiana, {USA}},
pages = {546--553},
publisher = {{IEEE} Computer Society},
year = {1996},
url = {https://doi.org/10.1109/ICDE.1996.492205},
doi = {10.1109/ICDE.1996.492205},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icde/LiYC96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/BucherH96,
author = {Philipp Bucher and
Kay Hofmann},
editor = {David J. States and
Pankaj Agarwal and
Terry Gaasterland and
Lawrence Hunter and
Randall Smith},
title = {A Sequence Similarity Search Algorithm Based on a Probabilistic Interpretation
of an Alignment Scoring System},
booktitle = {Proceedings of the Fourth International Conference on Intelligent
Systems for Molecular Biology, St. Louis, MO, USA, June 12-15 1996},
pages = {44--51},
publisher = {{AAAI}},
year = {1996},
url = {http://www.aaai.org/Library/ISMB/1996/ismb96-005.php},
timestamp = {Thu, 13 Dec 2012 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ismb/BucherH96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/StatesA96,
author = {David J. States and
Pankaj Agarwal},
editor = {David J. States and
Pankaj Agarwal and
Terry Gaasterland and
Lawrence Hunter and
Randall Smith},
title = {Compact Encoding Strategies for {DNA} Sequence Similarity Search},
booktitle = {Proceedings of the Fourth International Conference on Intelligent
Systems for Molecular Biology, St. Louis, MO, USA, June 12-15 1996},
pages = {211--217},
publisher = {{AAAI}},
year = {1996},
url = {http://www.aaai.org/Library/ISMB/1996/ismb96-023.php},
timestamp = {Thu, 13 Dec 2012 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ismb/StatesA96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/visualization/ChiRSCRB96,
author = {Ed Huai{-}hsin Chi and
John Riedl and
Elizabeth Shoop and
John V. Carlis and
Ernest Retzel and
Phillip Barry},
editor = {Roni Yagel and
Gregory M. Nielson},
title = {Flexible Information Visualization of Multivariate Data from Biological
Sequence Similarity Searches},
booktitle = {7th {IEEE} Visualization Conference, {IEEE} Vis 1996, San Francisco,
CA, USA, October 27 - November 1, 1996, Proceedings},
pages = {133--140},
publisher = {{IEEE} Computer Society and {ACM}},
year = {1996},
url = {https://doi.org/10.1109/VISUAL.1996.567796},
doi = {10.1109/VISUAL.1996.567796},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/visualization/ChiRSCRB96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CantalloubeLCNCCALMI95,
author = {Hubert Cantalloube and
Gilles Labesse and
Jacques Chomilier and
Carole E. Nahum and
Y. Y. Cho and
V. Chams and
A. Achour and
A. Lachgar and
J. P. Mbika and
W. Issing},
title = {Automat and {BLAST:} comparison of two protein sequence similarity
search programs},
journal = {Comput. Appl. Biosci.},
volume = {11},
number = {3},
pages = {261--272},
year = {1995},
url = {https://doi.org/10.1093/bioinformatics/11.3.261},
doi = {10.1093/BIOINFORMATICS/11.3.261},
timestamp = {Fri, 07 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/CantalloubeLCNCCALMI95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/visualization/ChiBSCRR95,
author = {Ed Huai{-}hsin Chi and
Phillip Barry and
Elizabeth Shoop and
John V. Carlis and
Ernest Retzel and
John Riedl},
title = {Visualization of Biological Sequence Similarity Search Results},
booktitle = {6th {IEEE} Visualization Conference, {IEEE} Vis 1995, Atlanta, GA,
USA, October 29 - November 3, 1995, Proceedings},
pages = {44--51},
publisher = {{IEEE} Computer Society Press},
year = {1995},
url = {https://doi.org/10.1109/VISUAL.1995.480794},
doi = {10.1109/VISUAL.1995.480794},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/visualization/ChiBSCRR95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Chapman94,
author = {M. S. Chapman},
title = {Sequence similarity scores and the inference of structure-function
relationships},
journal = {Comput. Appl. Biosci.},
volume = {10},
number = {2},
pages = {111--119},
year = {1994},
url = {https://doi.org/10.1093/bioinformatics/10.2.111},
doi = {10.1093/BIOINFORMATICS/10.2.111},
timestamp = {Fri, 15 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/Chapman94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Frohlich94,
author = {K. U. Frohlich},
title = {Sequence Similarity Presenter: a tool for the graphic display of similarities
of long sequences for use in presentations},
journal = {Comput. Appl. Biosci.},
volume = {10},
number = {2},
pages = {179--183},
year = {1994},
url = {https://doi.org/10.1093/bioinformatics/10.2.179},
doi = {10.1093/BIOINFORMATICS/10.2.179},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/Frohlich94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TorelliR94,
author = {A. Torelli and
C. A. Robotti},
title = {{ADVANCE} and {ADAM:} two algorithms for the analysis of global similarity
between homologous informational sequences},
journal = {Comput. Appl. Biosci.},
volume = {10},
number = {1},
pages = {3--5},
year = {1994},
url = {https://doi.org/10.1093/bioinformatics/10.1.3},
doi = {10.1093/BIOINFORMATICS/10.1.3},
timestamp = {Fri, 15 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/TorelliR94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/StatesG94,
author = {David J. States and
Warren Gish},
title = {{QGB:} Combined Use of Sequence Similarity and Codon Bias for Coding
Region Identification},
journal = {J. Comput. Biol.},
volume = {1},
number = {1},
pages = {39--50},
year = {1994},
url = {https://doi.org/10.1089/cmb.1994.1.39},
doi = {10.1089/CMB.1994.1.39},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/StatesG94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/Mezey94,
author = {Paul G. Mezey},
title = {Iterated similarity sequences and shape {ID} numbers for molecules},
journal = {J. Chem. Inf. Comput. Sci.},
volume = {34},
number = {2},
pages = {244--247},
year = {1994},
url = {https://doi.org/10.1021/ci00018a002},
doi = {10.1021/CI00018A002},
timestamp = {Thu, 14 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcisd/Mezey94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/EisenBW94,
author = {Jonathan A. Eisen and
Maria{-}Ines Benito and
Virginia Walbot},
title = {Sequence similarity of putative transposases links the maize Mutator
autonomous element and a group of bacterial insertion sequences},
journal = {Nucleic Acids Res.},
volume = {22},
number = {13},
pages = {2634--2636},
year = {1994},
url = {https://doi.org/10.1093/nar/22.13.2634},
doi = {10.1093/NAR/22.13.2634},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/EisenBW94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SmithMJO94,
author = {Darrin P. Smith and
Clive S. Mason and
Elizabeth A. Jones and
Robert W. Old},
title = {A novel nuclear receptor superfamily member in Xenopus that associates
with RXR, and shares extensive sequence similarity to the mammalian
vitamin {D3} receptor},
journal = {Nucleic Acids Res.},
volume = {22},
number = {1},
pages = {66--71},
year = {1994},
url = {https://doi.org/10.1093/nar/22.1.66},
doi = {10.1093/NAR/22.1.66},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SmithMJO94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fodo/AgrawalFS93,
author = {Rakesh Agrawal and
Christos Faloutsos and
Arun N. Swami},
editor = {David B. Lomet},
title = {Efficient Similarity Search In Sequence Databases},
booktitle = {Foundations of Data Organization and Algorithms, 4th International
Conference, FODO'93, Chicago, Illinois, USA, October 13-15, 1993,
Proceedings},
series = {Lecture Notes in Computer Science},
volume = {730},
pages = {69--84},
publisher = {Springer},
year = {1993},
url = {https://doi.org/10.1007/3-540-57301-1\_5},
doi = {10.1007/3-540-57301-1\_5},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/fodo/AgrawalFS93.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/Milosavljevic93,
author = {Aleksandar Milosavljevic},
editor = {Lawrence Hunter and
David B. Searls and
Jude W. Shavlik},
title = {Discovering Sequence Similarity by the Algorithmic Significance Method},
booktitle = {Proceedings of the 1st International Conference on Intelligent Systems
for Molecular Biology, Bethesda, MD, USA, July 1993},
pages = {284--291},
publisher = {{AAAI}},
year = {1993},
url = {http://www.aaai.org/Library/ISMB/1993/ismb93-033.php},
timestamp = {Thu, 13 Dec 2012 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ismb/Milosavljevic93.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HeringaSHA92,
author = {Jaap Heringa and
Hubert Sommerfeldt and
Desmond G. Higgins and
Patrick Argos},
title = {{OBSTRUCT:} a program to obtain largest cliques from a protein sequence
set according to structural resolution and sequence similarity},
journal = {Comput. Appl. Biosci.},
volume = {8},
number = {6},
pages = {599--600},
year = {1992},
url = {https://doi.org/10.1093/bioinformatics/8.6.599},
doi = {10.1093/BIOINFORMATICS/8.6.599},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HeringaSHA92.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dimacs/Leontovich92,
author = {Andrey M. Leontovich},
editor = {Simon Gindikin},
title = {On the Optimality of the Dayhoff Matrix for Computing the Similarity
Score Between Fragments of Biological Sequences},
booktitle = {Mathematical Methods Of Analysis Of Biopolymer Sequences, Proceedings
of a {DIMACS} Workshop},
series = {{DIMACS} Series in Discrete Mathematics and Theoretical Computer Science},
volume = {8},
pages = {1--10},
publisher = {{DIMACS/AMS}},
year = {1992},
url = {https://doi.org/10.1090/dimacs/008/01},
doi = {10.1090/DIMACS/008/01},
timestamp = {Mon, 22 May 2023 16:07:35 +0200},
biburl = {https://dblp.org/rec/conf/dimacs/Leontovich92.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dimacs/Piterbarg92,
author = {Vladimir I. Piterbarg},
editor = {Simon Gindikin},
title = {On the Distribution of the Maximum Similarity Score for Fragments
of Two Random Sequences},
booktitle = {Mathematical Methods Of Analysis Of Biopolymer Sequences, Proceedings
of a {DIMACS} Workshop},
series = {{DIMACS} Series in Discrete Mathematics and Theoretical Computer Science},
volume = {8},
pages = {11--18},
publisher = {{DIMACS/AMS}},
year = {1992},
url = {https://doi.org/10.1090/dimacs/008/02},
doi = {10.1090/DIMACS/008/02},
timestamp = {Thu, 09 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/dimacs/Piterbarg92.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat/JosephMT92,
author = {Deborah Joseph and
Joao Meidanis and
Prasoon Tiwari},
editor = {Otto Nurmi and
Esko Ukkonen},
title = {Determining {DNA} Sequence Similarity Using Maximum Independent Set
Algorithms for Interval Graphs},
booktitle = {Algorithm Theory - {SWAT} '92, Third Scandinavian Workshop on Algorithm
Theory, Helsinki, Finland, July 8-10, 1992, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {621},
pages = {326--337},
publisher = {Springer},
year = {1992},
url = {https://doi.org/10.1007/3-540-55706-7\_29},
doi = {10.1007/3-540-55706-7\_29},
timestamp = {Tue, 14 May 2019 10:00:39 +0200},
biburl = {https://dblp.org/rec/conf/swat/JosephMT92.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/HacheD88,
author = {R. J. Hache and
R. G. Deeley},
title = {Organization, sequence and nuclease hypersensitivity of repetitive
elements flanking the chicken apoVLDLII gene: extended sequence similarity
to elements flanking the chicken vitellogenin gene},
journal = {Nucleic Acids Res.},
volume = {16},
number = {1},
pages = {97--113},
year = {1988},
url = {https://doi.org/10.1093/nar/16.1.97},
doi = {10.1093/NAR/16.1.97},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/HacheD88.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HigginsG87,
author = {Desmond G. Higgins and
Manolo Gouy},
title = {Interfacing similarity search software with the sequence retrieval
system {ACNUC}},
journal = {Comput. Appl. Biosci.},
volume = {3},
number = {3},
pages = {239--241},
year = {1987},
url = {https://doi.org/10.1093/bioinformatics/3.3.239},
doi = {10.1093/BIOINFORMATICS/3.3.239},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HigginsG87.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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