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@article{DBLP:journals/mta/GoswamiS24,
  author       = {Shivani Goswami and
                  Anil Kumar Singh},
  title        = {A literature survey on various aspect of class imbalance problem in
                  data mining},
  journal      = {Multim. Tools Appl.},
  volume       = {83},
  number       = {27},
  pages        = {70025--70050},
  year         = {2024},
  url          = {https://doi.org/10.1007/s11042-024-18244-6},
  doi          = {10.1007/S11042-024-18244-6},
  timestamp    = {Tue, 30 Jul 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/mta/GoswamiS24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bmcbi/SimonDHSBO19,
  author       = {Christian Simon and
                  Kristian Davidsen and
                  Christina Hansen and
                  Emily Seymour and
                  Mike Bogetofte Barnkob and
                  Lars R{\o}nn Olsen},
  title        = {BioReader: a text mining tool for performing classification of biomedical
                  literature},
  journal      = {{BMC} Bioinform.},
  volume       = {19-S},
  number       = {13},
  pages        = {165--170},
  year         = {2019},
  url          = {https://doi.org/10.1186/s12859-019-2607-x},
  doi          = {10.1186/S12859-019-2607-X},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/SimonDHSBO19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/mta/SafariRA19,
  author       = {Rahebeh Mojtahedi Safari and
                  Amir Masoud Rahmani and
                  Sasan Hossein Alizadeh},
  title        = {User behavior mining on social media: a systematic literature review},
  journal      = {Multim. Tools Appl.},
  volume       = {78},
  number       = {23},
  pages        = {33747--33804},
  year         = {2019},
  url          = {https://doi.org/10.1007/s11042-019-08046-6},
  doi          = {10.1007/S11042-019-08046-6},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/mta/SafariRA19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bioinformatics/BakerASPGHSK17,
  author       = {Simon Baker and
                  Imran Ali and
                  Ilona Silins and
                  Sampo Pyysalo and
                  Yufan Guo and
                  Johan H{\"{o}}gberg and
                  Ulla Stenius and
                  Anna Korhonen},
  title        = {Cancer Hallmarks Analytics Tool {(CHAT):} a text mining approach to
                  organize and evaluate scientific literature on cancer},
  journal      = {Bioinform.},
  volume       = {33},
  number       = {24},
  pages        = {3973--3981},
  year         = {2017},
  url          = {https://doi.org/10.1093/bioinformatics/btx454},
  doi          = {10.1093/BIOINFORMATICS/BTX454},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/BakerASPGHSK17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jbcb/SunWL17,
  author       = {Dongdong Sun and
                  Minghui Wang and
                  Ao Li},
  title        = {{MPTM:} {A} tool for mining protein post-translational modifications
                  from literature},
  journal      = {J. Bioinform. Comput. Biol.},
  volume       = {15},
  number       = {5},
  pages        = {1740005:1--1740005:21},
  year         = {2017},
  url          = {https://doi.org/10.1142/S0219720017400054},
  doi          = {10.1142/S0219720017400054},
  timestamp    = {Mon, 16 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jbcb/SunWL17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/apsec/FengCL17,
  author       = {Luyi Feng and
                  Yin Kia Chiam and
                  Sin Kuang Lo},
  editor       = {Jian Lv and
                  He Jason Zhang and
                  Mike Hinchey and
                  Xiao Liu},
  title        = {Text-Mining Techniques and Tools for Systematic Literature Reviews:
                  {A} Systematic Literature Review},
  booktitle    = {24th Asia-Pacific Software Engineering Conference, {APSEC} 2017, Nanjing,
                  China, December 4-8, 2017},
  pages        = {41--50},
  publisher    = {{IEEE} Computer Society},
  year         = {2017},
  url          = {https://doi.org/10.1109/APSEC.2017.10},
  doi          = {10.1109/APSEC.2017.10},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/apsec/FengCL17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/www/LiuHYC15,
  author       = {Yu Liu and
                  Zhen Huang and
                  Yizhou Yan and
                  Yufeng Chen},
  editor       = {Aldo Gangemi and
                  Stefano Leonardi and
                  Alessandro Panconesi},
  title        = {Science Navigation Map: an Interactive Data Mining Tool for Literature
                  Analysis},
  booktitle    = {Proceedings of the 24th International Conference on World Wide Web
                  Companion, {WWW} 2015, Florence, Italy, May 18-22, 2015 - Companion
                  Volume},
  pages        = {591--596},
  publisher    = {{ACM}},
  year         = {2015},
  url          = {https://doi.org/10.1145/2740908.2741733},
  doi          = {10.1145/2740908.2741733},
  timestamp    = {Tue, 27 Dec 2022 09:06:31 +0100},
  biburl       = {https://dblp.org/rec/conf/www/LiuHYC15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biodb/ToriiLLODCAHVW14,
  author       = {Manabu Torii and
                  Gang Li and
                  Zhiwen Li and
                  Rose Oughtred and
                  Francesca Diella and
                  Irem {\c{C}}elen and
                  Cecilia N. Arighi and
                  Hongzhan Huang and
                  K. Vijay{-}Shanker and
                  Cathy H. Wu},
  title        = {{RLIMS-P:} an online text-mining tool for literature-based extraction
                  of protein phosphorylation information},
  journal      = {Database J. Biol. Databases Curation},
  volume       = {2014},
  year         = {2014},
  url          = {https://doi.org/10.1093/database/bau081},
  doi          = {10.1093/DATABASE/BAU081},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biodb/ToriiLLODCAHVW14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/bcb/WeiKL14,
  author       = {Chih{-}Hsuan Wei and
                  Hung{-}Yu Kao and
                  Zhiyong Lu},
  editor       = {Pierre Baldi and
                  Wei Wang},
  title        = {Text mining tools for assisting literature curation},
  booktitle    = {Proceedings of the 5th {ACM} Conference on Bioinformatics, Computational
                  Biology, and Health Informatics, {BCB} '14, Newport Beach, California,
                  USA, September 20-23, 2014},
  pages        = {590--591},
  publisher    = {{ACM}},
  year         = {2014},
  url          = {https://doi.org/10.1145/2649387.2660786},
  doi          = {10.1145/2649387.2660786},
  timestamp    = {Tue, 06 Nov 2018 16:59:10 +0100},
  biburl       = {https://dblp.org/rec/conf/bcb/WeiKL14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/coling/GuoSSSHSK14,
  author       = {Yufan Guo and
                  Diarmuid {\'{O}} S{\'{e}}aghdha and
                  Ilona Silins and
                  Lin Sun and
                  Johan H{\"{o}}gberg and
                  Ulla Stenius and
                  Anna Korhonen},
  editor       = {Lamia Tounsi and
                  Rafal Rak},
  title        = {{CRAB} 2.0: {A} text mining tool for supporting literature review
                  in chemical cancer risk assessment},
  booktitle    = {{COLING} 2014, 25th International Conference on Computational Linguistics,
                  Proceedings of the Conference System Demonstrations, August 23-29,
                  2014, Dublin, Ireland},
  pages        = {76--80},
  publisher    = {{ACL}},
  year         = {2014},
  url          = {https://aclanthology.org/C14-2017/},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/coling/GuoSSSHSK14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biodb/RajaSN13,
  author       = {Kalpana Raja and
                  Suresh Subramani and
                  Jeyakumar Natarajan},
  title        = {PPInterFinder - a mining tool for extracting causal relations on human
                  proteins from literature},
  journal      = {Database J. Biol. Databases Curation},
  volume       = {2013},
  year         = {2013},
  url          = {https://doi.org/10.1093/database/bas052},
  doi          = {10.1093/DATABASE/BAS052},
  timestamp    = {Thu, 13 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biodb/RajaSN13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/cmpb/SeoudM13,
  author       = {Rania Ahmed Abul Seoud and
                  Mai S. Mabrouk},
  title        = {{TMT-HCC:} {A} tool for text mining the biomedical literature for
                  hepatocellular carcinoma {(HCC)} biomarkers identification},
  journal      = {Comput. Methods Programs Biomed.},
  volume       = {112},
  number       = {3},
  pages        = {640--648},
  year         = {2013},
  url          = {https://doi.org/10.1016/j.cmpb.2013.07.014},
  doi          = {10.1016/J.CMPB.2013.07.014},
  timestamp    = {Sat, 24 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/cmpb/SeoudM13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biodb/WeiHLBHKL12,
  author       = {Chih{-}Hsuan Wei and
                  Bethany R. Harris and
                  Donghui Li and
                  Tanya Z. Berardini and
                  Eva Huala and
                  Hung{-}Yu Kao and
                  Zhiyong Lu},
  title        = {Accelerating literature curation with text-mining tools: a case study
                  of using PubTator to curate genes in PubMed abstracts},
  journal      = {Database J. Biol. Databases Curation},
  volume       = {2012},
  year         = {2012},
  url          = {https://doi.org/10.1093/database/bas041},
  doi          = {10.1093/DATABASE/BAS041},
  timestamp    = {Wed, 07 Dec 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/biodb/WeiHLBHKL12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/biostec/RibGSB11,
  author       = {Leonor Rib and
                  Ricard Gavald{\`{a}} and
                  Jos{\'{e}} Manuel Soria and
                  Alfonso Buil},
  editor       = {Marco Pellegrini and
                  Ana L. N. Fred and
                  Joaquim Filipe and
                  Hugo Gamboa},
  title        = {SalaboMiner - {A} Biomedical Literature Mining Tool for Inferring
                  the Genetics of Complex Diseases},
  booktitle    = {{BIOINFORMATICS} 2011 - Proceedings of the International Conference
                  on Bioinformatics Models, Methods and Algorithms, Rome, Italy, 26-29
                  January, 2011},
  pages        = {143--148},
  publisher    = {SciTePress},
  year         = {2011},
  timestamp    = {Thu, 21 Dec 2017 16:21:33 +0100},
  biburl       = {https://dblp.org/rec/conf/biostec/RibGSB11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/sac/NingYPM10,
  author       = {Zi Ning and
                  Ji Soo Yi and
                  Mathew J. Palakal and
                  Anna M. McDaniel},
  editor       = {Sung Y. Shin and
                  Sascha Ossowski and
                  Michael Schumacher and
                  Mathew J. Palakal and
                  Chih{-}Cheng Hung},
  title        = {OncoViz: a user-centric mining and visualization tool for cancer-related
                  literature},
  booktitle    = {Proceedings of the 2010 {ACM} Symposium on Applied Computing (SAC),
                  Sierre, Switzerland, March 22-26, 2010},
  pages        = {1827--1828},
  publisher    = {{ACM}},
  year         = {2010},
  url          = {https://doi.org/10.1145/1774088.1774475},
  doi          = {10.1145/1774088.1774475},
  timestamp    = {Sun, 02 Jun 2019 21:18:37 +0200},
  biburl       = {https://dblp.org/rec/conf/sac/NingYPM10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bioinformatics/HurSSF09,
  author       = {Junguk Hur and
                  Adam D. Schuyler and
                  David J. States and
                  Eva L. Feldman},
  title        = {SciMiner: web-based literature mining tool for target identification
                  and functional enrichment analysis},
  journal      = {Bioinform.},
  volume       = {25},
  number       = {6},
  pages        = {838--840},
  year         = {2009},
  url          = {https://doi.org/10.1093/bioinformatics/btp049},
  doi          = {10.1093/BIOINFORMATICS/BTP049},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/HurSSF09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/nar/KrallingerPTV09,
  author       = {Martin Krallinger and
                  Carlos Rodr{\'{\i}}guez Penagos and
                  Ashish V. Tendulkar and
                  Alfonso Valencia},
  title        = {{PLAN2L:} a web tool for integrated text mining and literature-based
                  bioentity relation extraction},
  journal      = {Nucleic Acids Res.},
  volume       = {37},
  number       = {Web-Server-Issue},
  pages        = {160--165},
  year         = {2009},
  url          = {https://doi.org/10.1093/nar/gkp484},
  doi          = {10.1093/NAR/GKP484},
  timestamp    = {Thu, 23 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/KrallingerPTV09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bioinformatics/YuanHWTNRVW06,
  author       = {X. Yuan and
                  Zhang{-}Zhi Hu and
                  H. T. Wu and
                  Manabu Torii and
                  Meenakshi Narayanaswamy and
                  K. E. Ravikumar and
                  K. Vijay{-}Shanker and
                  Cathy H. Wu},
  title        = {An online literature mining tool for protein phosphorylation},
  journal      = {Bioinform.},
  volume       = {22},
  number       = {13},
  pages        = {1668--1669},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl159},
  doi          = {10.1093/BIOINFORMATICS/BTL159},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/YuanHWTNRVW06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/ecai/RinaldiSKH06,
  author       = {Fabio Rinaldi and
                  Gerold Schneider and
                  Kaarel Kaljurand and
                  Michael Hess},
  editor       = {Gerhard Brewka and
                  Silvia Coradeschi and
                  Anna Perini and
                  Paolo Traverso},
  title        = {Tools for Text Mining over Biomedical Literature},
  booktitle    = {{ECAI} 2006, 17th European Conference on Artificial Intelligence,
                  August 29 - September 1, 2006, Riva del Garda, Italy, Including Prestigious
                  Applications of Intelligent Systems {(PAIS} 2006), Proceedings},
  series       = {Frontiers in Artificial Intelligence and Applications},
  volume       = {141},
  pages        = {825--826},
  publisher    = {{IOS} Press},
  year         = {2006},
  timestamp    = {Tue, 13 Feb 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ecai/RinaldiSKH06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bmcbi/BeckerHDLBCE03,
  author       = {Kevin G. Becker and
                  Douglas A. Hosack and
                  Glynn Dennis Jr. and
                  Richard A. Lempicki and
                  Tiffani J. Bright and
                  Chris Cheadle and
                  James Engel},
  title        = {PubMatrix: a tool for multiplex literature mining},
  journal      = {{BMC} Bioinform.},
  volume       = {4},
  pages        = {61},
  year         = {2003},
  url          = {https://doi.org/10.1186/1471-2105-4-61},
  doi          = {10.1186/1471-2105-4-61},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/BeckerHDLBCE03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

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