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@article{DBLP:journals/biomedsem/HeYHLNBZPWLOWHT22,
  author       = {Yongqun He and
                  Hong Yu and
                  Anthony Huffman and
                  Asiyah Yu Lin and
                  Darren A. Natale and
                  John Beverley and
                  Ling Zheng and
                  Yehoshua Perl and
                  Zhigang Wang and
                  Yingtong Liu and
                  Edison Ong and
                  Yang Wang and
                  Philip Huang and
                  Long Tran and
                  Jinyang Du and
                  Zalan Shah and
                  Easheta Shah and
                  Roshan Desai and
                  Hsin{-}Hui Huang and
                  Yujia Tian and
                  Eric Merrell and
                  William D. Duncan and
                  Sivaram Arabandi and
                  Lynn M. Schriml and
                  Jie Zheng and
                  Anna Maria Masci and
                  Liwei Wang and
                  Hongfang Liu and
                  Fatima Zohra Smaili and
                  Robert Hoehndorf and
                  Zo{\"{e}} May Pendlington and
                  Paola Roncaglia and
                  Xianwei Ye and
                  Jiangan Xie and
                  Yi{-}Wei Tang and
                  Xiaolin Yang and
                  Suyuan Peng and
                  Luxia Zhang and
                  Luonan Chen and
                  Junguk Hur and
                  Gilbert S. Omenn and
                  Brian D. Athey and
                  Barry Smith},
  title        = {A comprehensive update on {CIDO:} the community-based coronavirus
                  infectious disease ontology},
  journal      = {J. Biomed. Semant.},
  volume       = {13},
  number       = {1},
  pages        = {25},
  year         = {2022},
  url          = {https://doi.org/10.1186/s13326-022-00279-z},
  doi          = {10.1186/S13326-022-00279-Z},
  timestamp    = {Tue, 07 May 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biomedsem/HeYHLNBZPWLOWHT22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/icbo/He0OWLHHBLDAXHY20,
  author       = {Yongqun He and
                  Hong Yu and
                  Edison Ong and
                  Yang Wang and
                  Yingtong Liu and
                  Anthony Huffman and
                  Hsin{-}Hui Huang and
                  John Beverley and
                  Asiyah Yu Lin and
                  William D. Duncan and
                  Sivaram Arabandi and
                  Jiangan Xie and
                  Junguk Hur and
                  Xiaolin Yang and
                  Luonan Chen and
                  Gilbert S. Omenn and
                  Brian D. Athey and
                  Barry Smith},
  editor       = {Janna Hastings and
                  Frank Loebe},
  title        = {{CIDO:} The Community-Based Coronavirus Infectious Disease Ontology},
  booktitle    = {Proceedings of the 11th International Conference on Biomedical Ontologies
                  {(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
                  Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
                  2020), Virtual conference hosted in Bolzano, Italy, September 17,
                  2020},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {2807},
  pages        = {1--10},
  publisher    = {CEUR-WS.org},
  year         = {2020},
  url          = {https://ceur-ws.org/Vol-2807/paperE.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:22:24 +0100},
  biburl       = {https://dblp.org/rec/conf/icbo/He0OWLHHBLDAXHY20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/icbo/HalperOPAM18,
  author       = {Michael Halper and
                  Christopher Ochs and
                  Yehoshua Perl and
                  Sivaram Arabandi and
                  Mark A. Musen},
  editor       = {Pankaj Jaiswal and
                  Laurel Cooper and
                  Melissa A. Haendel and
                  Christopher J. Mungall},
  title        = {Quality Assurance of Ontology Content Reuse},
  booktitle    = {Proceedings of the 9th International Conference on Biological Ontology
                  {(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {2285},
  publisher    = {CEUR-WS.org},
  year         = {2018},
  url          = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_15.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:22:24 +0100},
  biburl       = {https://dblp.org/rec/conf/icbo/HalperOPAM18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jbi/OchsPGATM17,
  author       = {Christopher Ochs and
                  Yehoshua Perl and
                  James Geller and
                  Sivaram Arabandi and
                  Tania Tudorache and
                  Mark A. Musen},
  title        = {An empirical analysis of ontology reuse in BioPortal},
  journal      = {J. Biomed. Informatics},
  volume       = {71},
  pages        = {165--177},
  year         = {2017},
  url          = {https://doi.org/10.1016/j.jbi.2017.05.021},
  doi          = {10.1016/J.JBI.2017.05.021},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jbi/OchsPGATM17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biomedsem/TaoHA16,
  author       = {Cui Tao and
                  Yongqun He and
                  Sivaram Arabandi},
  title        = {Vaccine and Drug Ontology Studies {(VDOS} 2014)},
  journal      = {J. Biomed. Semant.},
  volume       = {7},
  pages        = {6},
  year         = {2016},
  url          = {https://doi.org/10.1186/s13326-015-0039-8},
  doi          = {10.1186/S13326-015-0039-8},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biomedsem/TaoHA16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/amia/MeystreLXAWPSWZ16,
  author       = {St{\'{e}}phane M. Meystre and
                  Hongfang Liu and
                  Rong Xu and
                  Sivaram Arabandi and
                  Kavishwar B. Wagholikar and
                  Jon D. Patrick and
                  Guergana K. Savova and
                  Chunhua Weng and
                  Pierre Zweigenbaum and
                  Dina Demner{-}Fushman and
                  {\"{O}}zlem Uzuner and
                  Hua Xu},
  title        = {Natural Language Processing Working Group Pre-Symposium: Graduate
                  Student Consortium and 'Hackathon'},
  booktitle    = {{AMIA} 2016, American Medical Informatics Association Annual Symposium,
                  Chicago, IL, USA, November 12-16, 2016},
  publisher    = {{AMIA}},
  year         = {2016},
  url          = {https://knowledge.amia.org/amia-63300-1.3360278/t009-1.3369175/f009-1.3369176/2499034-1.3369215/2499356-1.3369212},
  timestamp    = {Wed, 14 Aug 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/MeystreLXAWPSWZ16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jbi/OchsPGHBAT15,
  author       = {Christopher Ochs and
                  Yehoshua Perl and
                  James Geller and
                  Melissa A. Haendel and
                  Matthew H. Brush and
                  Sivaram Arabandi and
                  Samson W. Tu},
  title        = {Summarizing and visualizing structural changes during the evolution
                  of biomedical ontologies using a Diff Abstraction Network},
  journal      = {J. Biomed. Informatics},
  volume       = {56},
  pages        = {127--144},
  year         = {2015},
  url          = {https://doi.org/10.1016/j.jbi.2015.05.018},
  doi          = {10.1016/J.JBI.2015.05.018},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jbi/OchsPGHBAT15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@proceedings{DBLP:conf/icbo/2014,
  editor       = {William R. Hogan and
                  Sivaram Arabandi and
                  Mathias Brochhausen},
  title        = {Proceedings of the 5th International Conference on Biomedical Ontology,
                  {ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1327},
  publisher    = {CEUR-WS.org},
  year         = {2015},
  url          = {https://ceur-ws.org/Vol-1327},
  urn          = {urn:nbn:de:0074-1327-1},
  timestamp    = {Fri, 10 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icbo/2014.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biomedsem/TaoHA14,
  author       = {Cui Tao and
                  Yongqun He and
                  Sivaram Arabandi},
  title        = {A 2013 workshop: vaccine and drug ontology studies {(VDOS} 2013)},
  journal      = {J. Biomed. Semant.},
  volume       = {5},
  pages        = {16},
  year         = {2014},
  url          = {https://doi.org/10.1186/2041-1480-5-16},
  doi          = {10.1186/2041-1480-5-16},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biomedsem/TaoHA14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/icbo/0001OSPAG13,
  author       = {Zhe He and
                  Christopher Ochs and
                  Larisa N. Soldatova and
                  Yehoshua Perl and
                  Sivaram Arabandi and
                  James Geller},
  editor       = {Cui Tao and
                  Yongqun He and
                  Luca Toldo and
                  Sivaram Arabandi and
                  Selja Sepp{\"{a}}l{\"{a}} and
                  Alan Ruttenberg},
  title        = {Auditing Redundant Import in Reuse of a Top Level Ontology for the
                  Drug Discovery Investigations Ontology},
  booktitle    = {Proceedings of the {ICBO2013} Workshops: International Workshop on
                  Vaccine and Drug Ontology Studies {(VDOS} 2013), International Workshop
                  on Definitions in Ontologies {(DO} 2013), part of the Semantic Trilogy
                  2013 , Montreal, Quebec, Canada, July 6th - 12th 2013},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1061},
  publisher    = {CEUR-WS.org},
  year         = {2013},
  url          = {https://ceur-ws.org/Vol-1061/Paper4\_vdos2013.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:22:24 +0100},
  biburl       = {https://dblp.org/rec/conf/icbo/0001OSPAG13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/icbo/NikolicSADSNMS13,
  author       = {Snezana Nikolic and
                  Prabhu Shankar and
                  Sivaram Arabandi and
                  Akshaye Dhawan and
                  Rajshekhar Sunderraman and
                  Shamkant B. Navathe and
                  Kunal Malhotra and
                  Rani H. Singh},
  editor       = {Michel Dumontier and
                  Robert Hoehndorf and
                  Christopher J. O. Baker},
  title        = {{ONSTR:} The Ontology for Newborn Screening Follow-up and Translational
                  Research},
  booktitle    = {Proceedings of the 4th International Conference on Biomedical Ontology,
                  {ICBO} 2013, Montreal, Canada, July 7-12, 2013},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1060},
  pages        = {54--61},
  publisher    = {CEUR-WS.org},
  year         = {2013},
  url          = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_47.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:22:24 +0100},
  biburl       = {https://dblp.org/rec/conf/icbo/NikolicSADSNMS13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/icbo/Ochs0PAHG13,
  author       = {Christopher Ochs and
                  Zhe He and
                  Yehoshua Perl and
                  Sivaram Arabandi and
                  Michael Halper and
                  James Geller},
  editor       = {Michel Dumontier and
                  Robert Hoehndorf and
                  Christopher J. O. Baker},
  title        = {Choosing the Granularity of Abstraction Networks for Orientation and
                  Quality Assurance of the Sleep Domain Ontology},
  booktitle    = {Proceedings of the 4th International Conference on Biomedical Ontology,
                  {ICBO} 2013, Montreal, Canada, July 7-12, 2013},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1060},
  pages        = {84--89},
  publisher    = {CEUR-WS.org},
  year         = {2013},
  url          = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_23.pdf},
  timestamp    = {Fri, 10 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icbo/Ochs0PAHG13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@proceedings{DBLP:conf/icbo/2013vdos,
  editor       = {Cui Tao and
                  Yongqun He and
                  Luca Toldo and
                  Sivaram Arabandi and
                  Selja Sepp{\"{a}}l{\"{a}} and
                  Alan Ruttenberg},
  title        = {Proceedings of the {ICBO2013} Workshops: International Workshop on
                  Vaccine and Drug Ontology Studies {(VDOS} 2013), International Workshop
                  on Definitions in Ontologies {(DO} 2013), part of the Semantic Trilogy
                  2013 , Montreal, Quebec, Canada, July 6th - 12th 2013},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1061},
  publisher    = {CEUR-WS.org},
  year         = {2013},
  url          = {https://ceur-ws.org/Vol-1061},
  urn          = {urn:nbn:de:0074-1061-3},
  timestamp    = {Fri, 10 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icbo/2013vdos.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/icbo/ArabandiM12,
  author       = {Sivaram Arabandi and
                  Helen Moran},
  editor       = {Ronald Cornet and
                  Robert Stevens},
  title        = {ClinicalKey: Terminology driven Semantic Search},
  booktitle    = {Proceedings of the 3rd International Conference on Biomedical Ontology
                  {(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {897},
  publisher    = {CEUR-WS.org},
  year         = {2012},
  url          = {https://ceur-ws.org/Vol-897/demo\_9.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:22:23 +0100},
  biburl       = {https://dblp.org/rec/conf/icbo/ArabandiM12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/fois/OgbujiAZZ10,
  author       = {Chimezie Ogbuji and
                  Sivaram Arabandi and
                  Songmao Zhang and
                  Guo{-}Qiang Zhang},
  editor       = {Antony Galton and
                  Riichiro Mizoguchi},
  title        = {Segmenting and Merging Domain-specific Ontology Modules for Clinical
                  Informatics},
  booktitle    = {Formal Ontology in Information Systems, Proceedings of the Sixth International
                  Conference, {FOIS} 2010, Toronto, Canada, May 11-14, 2010},
  series       = {Frontiers in Artificial Intelligence and Applications},
  volume       = {209},
  pages        = {414--427},
  publisher    = {{IOS} Press},
  year         = {2010},
  url          = {https://doi.org/10.3233/978-1-60750-535-8-414},
  doi          = {10.3233/978-1-60750-535-8-414},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/fois/OgbujiAZZ10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

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