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@article{DBLP:journals/ijhpca/ZvyaginBHDZBCKPMMIOVPWHEFXLSNRDV23, author = {Maxim Zvyagin and Alexander Brace and Kyle Hippe and Yuntian Deng and Bin Zhang and Cindy Orozco Bohorquez and Austin Clyde and Bharat Kale and Danilo Perez{-}Rivera and Heng Ma and Carla M. Mann and Michael W. Irvin and Defne G. Ozgulbas and Natalia Vassilieva and J. Gregory Pauloski and Logan T. Ward and Val{\'{e}}rie Hayot{-}Sasson and Murali Emani and Sam Foreman and Zhen Xie and Diangen Lin and Maulik Shukla and Weili Nie and Josh Romero and Christian Dallago and Arash Vahdat and Chaowei Xiao and Thomas Gibbs and Ian T. Foster and James J. Davis and Michael E. Papka and Thomas S. Brettin and Rick Stevens and Anima Anandkumar and Venkatram Vishwanath and Arvind Ramanathan}, title = {GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics}, journal = {Int. J. High Perform. Comput. Appl.}, volume = {37}, number = {6}, pages = {683--705}, year = {2023}, url = {https://doi.org/10.1177/10943420231201154}, doi = {10.1177/10943420231201154}, timestamp = {Mon, 11 Dec 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ijhpca/ZvyaginBHDZBCKPMMIOVPWHEFXLSNRDV23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/OlsonABCCDDDDKKLLMMMNNOOPPPPSSSTTVV23, author = {Robert D. Olson and Rida Assaf and Thomas S. Brettin and Neal Conrad and Clark Cucinell and James J. Davis and Donald M. Dempsey and Allan Dickerman and Emily M. Dietrich and Ronald W. Kenyon and Mehmet Kuscuoglu and Elliot J. Lefkowitz and Jian Lu and Dustin Machi and Catherine Macken and Chunhong Mao and Anna Maria Niewiadomska and Marcus Nguyen and Gary J. Olsen and Jamie C. Overbeek and Bruce D. Parrello and Victoria Parrello and Jacob s Porter and Gordon D. Pusch and Maulik Shukla and Indresh Singh and Lucy Stewart and Gene Tan and Chris Thomas and Margo VanOeffelen and Veronika Vonstein and Zachary S. Wallace and Andrew S. Warren and Alice R. Wattam and Fangfang Xia and Hyun Seung Yoo and Yun Zhang and Christian M. Zmasek and Richard H. Scheuermann and Rick L. Stevens}, title = {Introducing the Bacterial and Viral Bioinformatics Resource Center {(BV-BRC):} a resource combining PATRIC, {IRD} and ViPR}, journal = {Nucleic Acids Res.}, volume = {51}, number = {{D1}}, pages = {678--689}, year = {2023}, url = {https://doi.org/10.1093/nar/gkac1003}, doi = {10.1093/NAR/GKAC1003}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/OlsonABCCDDDDKKLLMMMNNOOPPPPSSSTTVV23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/sc/NarykovZBEPSVDS23, author = {Oleksandr Narykov and Yitan Zhu and Thomas S. Brettin and Yvonne A. Evrard and Alexander Partin and Maulik Shukla and Priyanka Vasanthakumari and James H. Doroshow and Rick Stevens}, title = {Entropy-Based Regularization on Deep Learning Models for Anti-Cancer Drug Response Prediction}, booktitle = {Proceedings of the {SC} '23 Workshops of The International Conference on High Performance Computing, Network, Storage, and Analysis, {SC-W} 2023, Denver, CO, USA, November 12-17, 2023}, pages = {121--122}, publisher = {{ACM}}, year = {2023}, url = {https://doi.org/10.1145/3624062.3624080}, doi = {10.1145/3624062.3624080}, timestamp = {Tue, 28 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/sc/NarykovZBEPSVDS23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2310-04610, author = {Shuaiwen Leon Song and Bonnie Kruft and Minjia Zhang and Conglong Li and Shiyang Chen and Chengming Zhang and Masahiro Tanaka and Xiaoxia Wu and Jeff Rasley and Ammar Ahmad Awan and Connor Holmes and Martin Cai and Adam Ghanem and Zhongzhu Zhou and Yuxiong He and Pete Luferenko and Divya Kumar and Jonathan A. Weyn and Ruixiong Zhang and Sylwester Klocek and Volodymyr Vragov and Mohammed AlQuraishi and Gustaf Ahdritz and Christina Floristean and Cristina Negri and Rao Kotamarthi and Venkatram Vishwanath and Arvind Ramanathan and Sam Foreman and Kyle Hippe and Troy Arcomano and Romit Maulik and Maxim Zvyagin and Alexander Brace and Bin Zhang and Cindy Orozco Bohorquez and Austin Clyde and Bharat Kale and Danilo Perez{-}Rivera and Heng Ma and Carla M. Mann and Michael W. Irvin and J. Gregory Pauloski and Logan T. Ward and Val{\'{e}}rie Hayot{-}Sasson and Murali Emani and Zhen Xie and Diangen Lin and Maulik Shukla and Ian T. Foster and James J. Davis and Michael E. Papka and Thomas S. Brettin and Prasanna Balaprakash and Gina Tourassi and John Gounley and Heidi A. Hanson and Thomas E. Potok and Massimiliano Lupo Pasini and Kate Evans and Dan Lu and Dalton D. Lunga and Junqi Yin and Sajal Dash and Feiyi Wang and Mallikarjun Shankar and Isaac Lyngaas and Xiao Wang and Guojing Cong and Pei Zhang and Ming Fan and Siyan Liu and Adolfy Hoisie and Shinjae Yoo and Yihui Ren and William Tang and Kyle Felker and Alexey Svyatkovskiy and Hang Liu and Ashwin M. Aji and Angela Dalton and Michael J. Schulte and Karl Schulz and Yuntian Deng and Weili Nie and Josh Romero and Christian Dallago and Arash Vahdat and Chaowei Xiao and Thomas Gibbs and Anima Anandkumar and Rick Stevens}, title = {DeepSpeed4Science Initiative: Enabling Large-Scale Scientific Discovery through Sophisticated {AI} System Technologies}, journal = {CoRR}, volume = {abs/2310.04610}, year = {2023}, url = {https://doi.org/10.48550/arXiv.2310.04610}, doi = {10.48550/ARXIV.2310.04610}, eprinttype = {arXiv}, eprint = {2310.04610}, timestamp = {Tue, 05 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/corr/abs-2310-04610.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bib/XiaABBGCCDDDEFG22, author = {Fangfang Xia and Jonathan E. Allen and Prasanna Balaprakash and Thomas S. Brettin and Cristina Garcia{-}Cardona and Austin Clyde and Judith D. Cohn and James H. Doroshow and Xiaotian Duan and Veronika Dubinkina and Yvonne A. Evrard and Ya Ju Fan and Jason Gans and Stewart He and Pinyi Lu and Sergei Maslov and Alexander Partin and Maulik Shukla and Eric A. Stahlberg and Justin M. Wozniak and Hyun Seung Yoo and George F. Zaki and Yitan Zhu and Rick Stevens}, title = {A cross-study analysis of drug response prediction in cancer cell lines}, journal = {Briefings Bioinform.}, volume = {23}, number = {1}, year = {2022}, url = {https://doi.org/10.1093/bib/bbab356}, doi = {10.1093/BIB/BBAB356}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bib/XiaABBGCCDDDEFG22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ewc/ShuklaBPPM22, author = {Vipin Shukla and Mainak Bandyopadhyay and Vivek Pandya and A. Pandey and Avirup Maulik}, title = {Artificial neural network based predictive negative hydrogen ion helicon plasma source for fusion grade large sized ion source}, journal = {Eng. Comput.}, volume = {38}, number = {1}, pages = {347--364}, year = {2022}, url = {https://doi.org/10.1007/s00366-020-01060-5}, doi = {10.1007/S00366-020-01060-5}, timestamp = {Mon, 23 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ewc/ShuklaBPPM22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/fbinf/WallaceDNOSSZZS22, author = {Zachary S. Wallace and James J. Davis and Anna Maria Niewiadomska and Robert D. Olson and Maulik Shukla and Rick Stevens and Yun Zhang and Christian M. Zmasek and Richard H. Scheuermann}, title = {Early detection of emerging SARS-CoV-2 variants of interest for experimental evaluation}, journal = {Frontiers Bioinform.}, volume = {2}, year = {2022}, url = {https://doi.org/10.3389/fbinf.2022.1020189}, doi = {10.3389/FBINF.2022.1020189}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/fbinf/WallaceDNOSSZZS22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bib/VanOeffelenNABD21, author = {Margo VanOeffelen and Marcus Nguyen and Derya Aytan{-}Aktug and Thomas S. Brettin and Emily M. Dietrich and Ronald W. Kenyon and Dustin Machi and Chunhong Mao and Robert Olson and Gordon D. Pusch and Maulik Shukla and Rick Stevens and Veronika Vonstein and Andrew S. Warren and Alice R. Wattam and Hyun Seung Yoo and James J. Davis}, title = {A genomic data resource for predicting antimicrobial resistance from laboratory-derived antimicrobial susceptibility phenotypes}, journal = {Briefings Bioinform.}, volume = {22}, number = {6}, year = {2021}, url = {https://doi.org/10.1093/bib/bbab313}, doi = {10.1093/BIB/BBAB313}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bib/VanOeffelenNABD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/PartinBEZYXJCSF21, author = {Alexander Partin and Thomas S. Brettin and Yvonne A. Evrard and Yitan Zhu and Hyun Seung Yoo and Fangfang Xia and Songhao Jiang and Austin Clyde and Maulik Shukla and Michael Fonstein and James H. Doroshow and Rick L. Stevens}, title = {Learning curves for drug response prediction in cancer cell lines}, journal = {{BMC} Bioinform.}, volume = {22}, number = {1}, pages = {252}, year = {2021}, url = {https://doi.org/10.1186/s12859-021-04163-y}, doi = {10.1186/S12859-021-04163-Y}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/PartinBEZYXJCSF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/0002WABBBCCDDGG20, author = {James J. Davis and Alice R. Wattam and Ramy K. Aziz and Thomas S. Brettin and Ralph Butler and Rory Butler and Philippe Chlenski and Neal Conrad and Allan Dickerman and Emily M. Dietrich and Joseph L. Gabbard and Svetlana Gerdes and Andrew Guard and Ronald W. Kenyon and Dustin Machi and Chunhong Mao and Daniel E. Murphy{-}Olson and Marcus Nguyen and Eric K. Nordberg and Gary J. Olsen and Robert Olson and Jamie C. Overbeek and Ross A. Overbeek and Bruce D. Parrello and Gordon D. Pusch and Maulik Shukla and Chris Thomas and Margo VanOeffelen and Veronika Vonstein and Andrew S. Warren and Fangfang Xia and Dawen Xie and Hyun Seung Yoo and Rick Stevens}, title = {The {PATRIC} Bioinformatics Resource Center: expanding data and analysis capabilities}, journal = {Nucleic Acids Res.}, volume = {48}, number = {Database-Issue}, pages = {D606--D612}, year = {2020}, url = {https://doi.org/10.1093/nar/gkz943}, doi = {10.1093/NAR/GKZ943}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/0002WABBBCCDDGG20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/NguyenOSVD20, author = {Marcus Nguyen and Robert Olson and Maulik Shukla and Margo VanOeffelen and James J. Davis}, title = {Predicting antimicrobial resistance using conserved genes}, journal = {PLoS Comput. Biol.}, volume = {16}, number = {10}, year = {2020}, url = {https://doi.org/10.1371/journal.pcbi.1008319}, doi = {10.1371/JOURNAL.PCBI.1008319}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/NguyenOSVD20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2005-09572, author = {Yitan Zhu and Thomas S. Brettin and Yvonne A. Evrard and Alexander Partin and Fangfang Xia and Maulik Shukla and Hyun Seung Yoo and James H. Doroshow and Rick Stevens}, title = {Ensemble Transfer Learning for the Prediction of Anti-Cancer Drug Response}, journal = {CoRR}, volume = {abs/2005.09572}, year = {2020}, url = {https://arxiv.org/abs/2005.09572}, eprinttype = {arXiv}, eprint = {2005.09572}, timestamp = {Fri, 22 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-2005-09572.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2011-12466, author = {Alexander Partin and Thomas S. Brettin and Yvonne A. Evrard and Yitan Zhu and Hyun Seung Yoo and Fangfang Xia and Songhao Jiang and Austin Clyde and Maulik Shukla and Michael Fonstein and James H. Doroshow and Rick Stevens}, title = {Learning Curves for Drug Response Prediction in Cancer Cell Lines}, journal = {CoRR}, volume = {abs/2011.12466}, year = {2020}, url = {https://arxiv.org/abs/2011.12466}, eprinttype = {arXiv}, eprint = {2011.12466}, timestamp = {Tue, 01 Dec 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/corr/abs-2011-12466.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bib/AntonopoulosAAB19, author = {Dionysios A. Antonopoulos and Rida Assaf and Ramy Karam Aziz and Thomas S. Brettin and Christopher Bun and Neal Conrad and James J. Davis and Emily M. Dietrich and Terry Disz and Svetlana Gerdes and Ronald W. Kenyon and Dustin Machi and Chunhong Mao and Daniel E. Murphy{-}Olson and Eric K. Nordberg and Gary J. Olsen and Robert Olson and Ross A. Overbeek and Bruce D. Parrello and Gordon D. Pusch and John Santerre and Maulik Shukla and Rick L. Stevens and Margo VanOeffelen and Veronika Vonstein and Andrew S. Warren and Alice R. Wattam and Fangfang Xia and Hyun Seung Yoo}, title = {{PATRIC} as a unique resource for studying antimicrobial resistance}, journal = {Briefings Bioinform.}, volume = {20}, number = {4}, pages = {1094--1102}, year = {2019}, url = {https://doi.org/10.1093/bib/bbx083}, doi = {10.1093/BIB/BBX083}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bib/AntonopoulosAAB19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/XiaSBGCAMHDESS18, author = {Fangfang Xia and Maulik Shukla and Thomas S. Brettin and Cristina Garcia{-}Cardona and Judith D. Cohn and Jonathan E. Allen and Sergei Maslov and Susan L. Holbeck and James H. Doroshow and Yvonne A. Evrard and Eric A. Stahlberg and Rick L. Stevens}, title = {Predicting tumor cell line response to drug pairs with deep learning}, journal = {{BMC} Bioinform.}, volume = {19-S}, number = {18}, pages = {71--79}, year = {2018}, url = {https://doi.org/10.1186/s12859-018-2509-3}, doi = {10.1186/S12859-018-2509-3}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/XiaSBGCAMHDESS18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/WattamDABBBCDDG17, author = {Alice R. Wattam and James J. Davis and Rida Assaf and S{\'{e}}bastien Boisvert and Thomas S. Brettin and Christopher Bun and Neal Conrad and Emily M. Dietrich and Terry Disz and Joseph L. Gabbard and Svetlana Gerdes and Christopher S. Henry and Ronald W. Kenyon and Dustin Machi and Chunhong Mao and Eric K. Nordberg and Gary J. Olsen and Daniel E. Murphy{-}Olson and Robert Olson and Ross A. Overbeek and Bruce D. Parrello and Gordon D. Pusch and Maulik Shukla and Veronika Vonstein and Andrew S. Warren and Fangfang Xia and Hyun Seung Yoo and Rick L. Stevens}, title = {Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center}, journal = {Nucleic Acids Res.}, volume = {45}, number = {Database-Issue}, pages = {D535--D542}, year = {2017}, url = {https://doi.org/10.1093/nar/gkw1017}, doi = {10.1093/NAR/GKW1017}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/WattamDABBBCDDG17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/MaoAWWSYS15, author = {Chunhong Mao and David Abraham and Alice R. Wattam and Meredith J. C. Wilson and Maulik Shukla and Hyun Seung Yoo and Bruno W. S. Sobral}, title = {Curation, integration and visualization of bacterial virulence factors in {PATRIC}}, journal = {Bioinform.}, volume = {31}, number = {2}, pages = {252--258}, year = {2015}, url = {https://doi.org/10.1093/bioinformatics/btu631}, doi = {10.1093/BIOINFORMATICS/BTU631}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/MaoAWWSYS15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/WarrenABDEGHHLM15, author = {Andrew S. Warren and Cristina Aurrecoechea and Brian P. Brunk and Prerak Desai and Scott J. Emrich and Gloria I. Giraldo{-}Calder{\'{o}}n and Omar S. Harb and Deborah Hix and Daniel Lawson and Dustin Machi and Chunhong Mao and Michael McClelland and Eric K. Nordberg and Maulik Shukla and Leslie B. Vosshall and Alice R. Wattam and Rebecca Will and Hyun Seung Yoo and Bruno W. S. Sobral}, title = {RNA-Rocket: an RNA-Seq analysis resource for infectious disease research}, journal = {Bioinform.}, volume = {31}, number = {9}, pages = {1496--1498}, year = {2015}, url = {https://doi.org/10.1093/bioinformatics/btv002}, doi = {10.1093/BIOINFORMATICS/BTV002}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/WarrenABDEGHHLM15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/OverbeekOPODDEGPSVWXS14, author = {Ross A. Overbeek and Robert Olson and Gordon D. Pusch and Gary J. Olsen and James J. Davis and Terry Disz and Robert A. Edwards and Svetlana Gerdes and Bruce D. Parrello and Maulik Shukla and Veronika Vonstein and Alice R. Wattam and Fangfang Xia and Rick Stevens}, title = {The {SEED} and the Rapid Annotation of microbial genomes using Subsystems Technology {(RAST)}}, journal = {Nucleic Acids Res.}, volume = {42}, number = {Database-Issue}, pages = {206--214}, year = {2014}, url = {https://doi.org/10.1093/nar/gkt1226}, doi = {10.1093/NAR/GKT1226}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/OverbeekOPODDEGPSVWXS14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/WattamADDDGGGHKMMNOOPSSSSVWWWYZZS14, author = {Alice R. Wattam and David Abraham and Oral Dalay and Terry Disz and Timothy Driscoll and Joseph L. Gabbard and Joseph J. Gillespie and Roger Gough and Deborah Hix and Ronald W. Kenyon and Dustin Machi and Chunhong Mao and Eric K. Nordberg and Robert Olson and Ross A. Overbeek and Gordon D. Pusch and Maulik Shukla and Julie Schulman and Rick L. Stevens and Daniel E. Sullivan and Veronika Vonstein and Andrew S. Warren and Rebecca Will and Meredith J. C. Wilson and Hyun Seung Yoo and Chengdong Zhang and Yan Zhang and Bruno W. S. Sobral}, title = {PATRIC, the bacterial bioinformatics database and analysis resource}, journal = {Nucleic Acids Res.}, volume = {42}, number = {Database-Issue}, pages = {581--591}, year = {2014}, url = {https://doi.org/10.1093/nar/gkt1099}, doi = {10.1093/NAR/GKT1099}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/WattamADDDGGGHKMMNOOPSSSSVWWWYZZS14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/DriscollGMDSFHBS11, author = {Timothy Driscoll and Joseph L. Gabbard and Chunhong Mao and Oral Dalay and Maulik Shukla and Clark C. Freifeld and Anne Gatewood Hoen and John S. Brownstein and Bruno W. S. Sobral}, title = {Integration and visualization of host-pathogen data related to infectious diseases}, journal = {Bioinform.}, volume = {27}, number = {16}, pages = {2279--2287}, year = {2011}, url = {https://doi.org/10.1093/bioinformatics/btr391}, doi = {10.1093/BIOINFORMATICS/BTR391}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/DriscollGMDSFHBS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/biostec/SobralMSSZ11, author = {Bruno W. S. Sobral and Chunhong Mao and Maulik Shukla and Daniel E. Sullivan and Chengdong Zhang}, editor = {Ana L. N. Fred and Joaquim Filipe and Hugo Gamboa}, title = {Informatics-Driven Infectious Disease Research}, booktitle = {Biomedical Engineering Systems and Technologies - 4th International Joint Conference, {BIOSTEC} 2011, Rome, Italy, January 26-29, 2011, Revised Selected Papers}, series = {Communications in Computer and Information Science}, volume = {273}, pages = {3--11}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-29752-6\_1}, doi = {10.1007/978-3-642-29752-6\_1}, timestamp = {Sun, 25 Oct 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/biostec/SobralMSSZ11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SnyderKLNKSSTXYZDDGHHHJKMMNPSYGGHABBKMRVCCDEKWSS07, author = {E. E. Snyder and N. Kampanya and J. Lu and Eric K. Nordberg and H. R. Karur and Maulik Shukla and Jeetendra Soneja and Y. Tian and Tian Xue and Hyun Seung Yoo and Fengkai Zhang and C. Dharmanolla and N. V. Dongre and Joseph J. Gillespie and J. Hamelius and M. Hance and K. I. Huntington and D. Jukneliene and J. Koziski and L. Mackasmiel and S. P. Mane and V. Nguyen and A. Purkayastha and J. Shallom and G. Yu and Y. Guo and Joseph L. Gabbard and Deborah Hix and A. F. Azad and S. C. Baker and S. M. Boyle and Y. Khudyakov and X. J. Meng and C. Rupprecht and J. Vinje and Oswald Crasta and M. J. Czar and Allan Dickerman and J. Dana Eckart and Ron Kenyon and Rebecca Will and Jo{\~{a}}o C. Setubal and Bruno W. S. Sobral}, title = {{PATRIC:} The {VBI} PathoSystems Resource Integration Center}, journal = {Nucleic Acids Res.}, volume = {35}, number = {Database-Issue}, pages = {401--406}, year = {2007}, url = {https://doi.org/10.1093/nar/gkl858}, doi = {10.1093/NAR/GKL858}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SnyderKLNKSSTXYZDDGHHHJKMMNPSYGGHABBKMRVCCDEKWSS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ipps/SiosonWVESKRHGCKW03, author = {Allan A. Sioson and Jonathan I. Watkinson and Cecilia Vasquez{-}Robinet and Margaret Ellis and Maulik Shukla and Deept Kumar and Naren Ramakrishnan and Lenwood S. Heath and Ruth Grene and Boris I. Chevone and Karen Kafadar and Layne T. Watson}, title = {Expresso and Chips: Creating a Next Generation Microarray Experiment Management System}, booktitle = {17th International Parallel and Distributed Processing Symposium {(IPDPS} 2003), 22-26 April 2003, Nice, France, CD-ROM/Abstracts Proceedings}, pages = {209}, publisher = {{IEEE} Computer Society}, year = {2003}, url = {https://doi.org/10.1109/IPDPS.2003.1213384}, doi = {10.1109/IPDPS.2003.1213384}, timestamp = {Mon, 15 Apr 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/ipps/SiosonWVESKRHGCKW03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/vissym/SomervellMNS02, author = {Jacob P. Somervell and D. Scott McCrickard and Chris North and Maulik Shukla}, editor = {David S. Ebert and Pere Brunet and Isabel Navazo}, title = {An Evaluation of Information Visualization in Attention-Limited Environments}, booktitle = {4th Joint Eurographics - {IEEE} {TCVG} Symposium on Visualization, VisSym 2002, Barcelona, Spain, May 27-29, 2002}, pages = {211--216}, publisher = {Eurographics Association}, year = {2002}, url = {https://doi.org/10.2312/VisSym/VisSym02/211-216}, doi = {10.2312/VISSYM/VISSYM02/211-216}, timestamp = {Wed, 04 Nov 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/vissym/SomervellMNS02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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