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@article{DBLP:journals/tcs/Tsur24,
  author       = {Dekel Tsur},
  title        = {Algorithms for 2-club cluster deletion problems using automated generation
                  of branching rules},
  journal      = {Theor. Comput. Sci.},
  volume       = {984},
  pages        = {114321},
  year         = {2024}
}
@article{DBLP:journals/bioinformatics/ChengWZZZWWLYG23,
  author       = {Lixin Cheng and
                  Haonan Wu and
                  Xubin Zheng and
                  Ning Zhang and
                  Pengfei Zhao and
                  Ran Wang and
                  Qiong Wu and
                  Tao Liu and
                  Xiaojun Yang and
                  Qingshan Geng},
  title        = {{GPGPS:} a robust prognostic gene pair signature of glioma ensembling
                  \emph{IDH} mutation and 1p/19q co-deletion},
  journal      = {Bioinform.},
  volume       = {39},
  number       = {1},
  year         = {2023}
}
@article{DBLP:journals/jcb/TamuraMTK23,
  author       = {Takeyuki Tamura and
                  Ai Muto{-}fujita and
                  Yukako Tohsato and
                  Tomoyuki Kosaka},
  title        = {Gene Deletion Algorithms for Minimum Reaction Network Design by Mixed-Integer
                  Linear Programming for Metabolite Production in Constraint-Based Models:
                  gDel{\_}minRN},
  journal      = {J. Comput. Biol.},
  volume       = {30},
  number       = {5},
  pages        = {553--568},
  year         = {2023}
}
@article{DBLP:journals/make/NajafiPL23,
  author       = {Bahareh Najafi and
                  Saeedeh Parsaeefard and
                  Alberto Leon{-}Garcia},
  title        = {Entropy-Aware Time-Varying Graph Neural Networks with Generalized
                  Temporal Hawkes Process: Dynamic Link Prediction in the Presence of
                  Node Addition and Deletion},
  journal      = {Mach. Learn. Knowl. Extr.},
  volume       = {5},
  number       = {4},
  pages        = {1359--1381},
  year         = {2023}
}
@article{DBLP:journals/tcbb/Tamura23,
  author       = {Takeyuki Tamura},
  title        = {Trimming Gene Deletion Strategies for Growth-Coupled Production in
                  Constraint-Based Metabolic Networks: TrimGdel},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {20},
  number       = {2},
  pages        = {1540--1549},
  year         = {2023}
}
@article{DBLP:journals/tcbb/Tamura23a,
  author       = {Takeyuki Tamura},
  title        = {MetNetComp: Database for Minimal and Maximal Gene-Deletion Strategies
                  for Growth-Coupled Production of Genome-Scale Metabolic Networks},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {20},
  number       = {6},
  pages        = {3748--3758},
  year         = {2023}
}
@inproceedings{DBLP:conf/cocoon/TianXY23,
  author       = {Kangyi Tian and
                  Mingyu Xiao and
                  Boting Yang},
  title        = {Parameterized Algorithms for Cluster Vertex Deletion on Degree-4 Graphs
                  and General Graphs},
  booktitle    = {{COCOON} {(1)}},
  series       = {Lecture Notes in Computer Science},
  volume       = {14422},
  pages        = {182--194},
  publisher    = {Springer},
  year         = {2023}
}
@inproceedings{DBLP:conf/ecai/KongA23,
  author       = {Zhifeng Kong and
                  Scott Alfeld},
  title        = {Approximate Data Deletion in Generative Models},
  booktitle    = {{ECAI}},
  series       = {Frontiers in Artificial Intelligence and Applications},
  volume       = {372},
  pages        = {1288--1323},
  publisher    = {{IOS} Press},
  year         = {2023}
}
@inproceedings{DBLP:conf/nips/00030Q023,
  author       = {Jiaqi Liu and
                  Jian Lou and
                  Zhan Qin and
                  Kui Ren},
  title        = {Certified Minimax Unlearning with Generalization Rates and Deletion
                  Capacity},
  booktitle    = {NeurIPS},
  year         = {2023}
}
@article{DBLP:journals/corr/abs-2312-10336,
  author       = {Jiaqi Liu and
                  Jian Lou and
                  Zhan Qin and
                  Kui Ren},
  title        = {Certified Minimax Unlearning with Generalization Rates and Deletion
                  Capacity},
  journal      = {CoRR},
  volume       = {abs/2312.10336},
  year         = {2023}
}
@article{DBLP:journals/corr/abs-2206-14439,
  author       = {Zhifeng Kong and
                  Scott Alfeld},
  title        = {Approximate Data Deletion in Generative Models},
  journal      = {CoRR},
  volume       = {abs/2206.14439},
  year         = {2022}
}
@article{DBLP:journals/corr/abs-2209-01519,
  author       = {Daniel M. DiPietro},
  title        = {Quantitative Stopword Generation for Sentiment Analysis via Recursive
                  and Iterative Deletion},
  journal      = {CoRR},
  volume       = {abs/2209.01519},
  year         = {2022}
}
@article{DBLP:journals/bmcbi/SolanaGG21,
  author       = {Jimena Solana and
                  Emilio Garrote{-}S{\'{a}}nchez and
                  Rosario Gil},
  title        = {{DELEAT:} gene essentiality prediction and deletion design for bacterial
                  genome reduction},
  journal      = {{BMC} Bioinform.},
  volume       = {22},
  number       = {1},
  pages        = {444},
  year         = {2021}
}
@article{DBLP:journals/fgcs/WangZXX21,
  author       = {Qiang Wang and
                  Fucai Zhou and
                  Jian Xu and
                  Zifeng Xu},
  title        = {Efficient verifiable databases with additional insertion and deletion
                  operations in cloud computing},
  journal      = {Future Gener. Comput. Syst.},
  volume       = {115},
  pages        = {553--567},
  year         = {2021}
}
@article{DBLP:journals/nc/FernauKR21,
  author       = {Henning Fernau and
                  Lakshmanan Kuppusamy and
                  Indhumathi Raman},
  title        = {On the generative capacity of matrix insertion-deletion systems of
                  small sum-norm},
  journal      = {Nat. Comput.},
  volume       = {20},
  number       = {4},
  pages        = {671--689},
  year         = {2021}
}
@article{DBLP:journals/neuroimage/GassPRSWSCCDSKS21,
  author       = {Natalia Gass and
                  Zeru Peterson and
                  Jonathan Rochus Reinwald and
                  Alexander Sartorius and
                  Wolfgang Weber{-}Fahr and
                  Markus Sack and
                  Junfang Chen and
                  Han Cao and
                  Michael Didriksen and
                  Tine Bryan Stensb{\o}l and
                  Gabrielle Klemme and
                  Adam J. Schwarz and
                  Emanuel Schwarz and
                  Andreas Meyer{-}Lindenberg and
                  Thomas Nickl{-}Jockschat},
  title        = {Differential resting-state patterns across networks are spatially
                  associated with \emph{Comt} and \emph{Trmt2a} gene expression patterns
                  in a mouse model of 22q11.2 deletion},
  journal      = {NeuroImage},
  volume       = {243},
  pages        = {118520},
  year         = {2021}
}
@inproceedings{DBLP:conf/seeda/BellosKSSLMFGS21,
  author       = {Christos V. Bellos and
                  Charilaos Kostoulas and
                  Konstantinos Stefanou and
                  Prodromos Sakaloglou and
                  Paris Ladias and
                  Sofia Markoula and
                  Alexandros Fyraridis and
                  Ioannis Georgiou and
                  Georgios Stergios},
  title        = {A genetic platform for studying the creation of structural abnormalities
                  of chromosomes that cause micro-deletion and micro-duplication {(MMS)}
                  syndromes},
  booktitle    = {{SEEDA-CECNSM}},
  pages        = {1--4},
  publisher    = {{IEEE}},
  year         = {2021}
}
@phdthesis{DBLP:phd/hal/Bigio20,
  author       = {Benedetta Bigio},
  title        = {Assessment of Hardy-Weinberg equilibrium and detection of chromosomal
                  deletions in exome-wide sequencing data from large datasets: exploiting
                  large exome datasets to improve identification of clinically relevant
                  genetic variants. (Int{\'{e}}r{\^{e}}t de l'{\'{e}}quilibre
                  de Hardy-Weinberg et d{\'{e}}tection des d{\'{e}}l{\'{e}}tions
                  chromosomiques dans les donn{\'{e}}es de s{\'{e}}quen{\c{c}}age
                  d'exome {\`{a}} partir de grands ensembles de donn{\'{e}}es)},
  school       = {Paris Cit{\'{e}} University, France},
  year         = {2020}
}
@article{DBLP:journals/access/RamliSMH20,
  author       = {Kalamullah Ramli and
                  Yohan Suryanto and
                  Magfirawaty and
                  Nur Hayati},
  title        = {Novel Image Encryption Using a Pseudoset Generated by Chaotic Permutation
                  Multicircular Shrinking With a Gradual Deletion of the Input Set},
  journal      = {{IEEE} Access},
  volume       = {8},
  pages        = {110351--110361},
  year         = {2020}
}
@article{DBLP:journals/fgcs/XiongCBCWLL20,
  author       = {Jinbo Xiong and
                  Lei Chen and
                  Md. Zakirul Alam Bhuiyan and
                  Chunjie Cao and
                  Minshen Wang and
                  Entao Luo and
                  Ximeng Liu},
  title        = {A secure data deletion scheme for IoT devices through key derivation
                  encryption and data analysis},
  journal      = {Future Gener. Comput. Syst.},
  volume       = {111},
  pages        = {741--753},
  year         = {2020}
}
@article{DBLP:journals/prl/Serratosa20a,
  author       = {Francesc Serratosa},
  title        = {A general model to define the substitution, insertion and deletion
                  graph edit costs based on an embedded space},
  journal      = {Pattern Recognit. Lett.},
  volume       = {138},
  pages        = {115--122},
  year         = {2020}
}
@inproceedings{DBLP:conf/dcfs/FernauKR20,
  author       = {Henning Fernau and
                  Lakshmanan Kuppusamy and
                  Indhumathi Raman},
  title        = {On the Power of Generalized Forbidding Insertion-Deletion Systems},
  booktitle    = {{DCFS}},
  series       = {Lecture Notes in Computer Science},
  volume       = {12442},
  pages        = {52--63},
  publisher    = {Springer},
  year         = {2020}
}
@inproceedings{DBLP:conf/intcompsymp/ChengLCHT20,
  author       = {Ji{-}Hong Cheng and
                  Wen{-}Chun Liu and
                  Ting{-}Tsung Chang and
                  Sun{-}Yuan Hsieh and
                  Vincent S. Tseng},
  title        = {An Effective and Efficient Algorithm for Detecting Exact Deletion
                  Breakpoints from Viral Next-Generation Sequencing Data},
  booktitle    = {{ICS}},
  pages        = {147--152},
  publisher    = {{IEEE}},
  year         = {2020}
}
@inproceedings{DBLP:conf/sigmod/WaudbySPS20,
  author       = {Jack Waudby and
                  Benjamin A. Steer and
                  Arnau Prat{-}P{\'{e}}rez and
                  G{\'{a}}bor Sz{\'{a}}rnyas},
  title        = {Supporting Dynamic Graphs and Temporal Entity Deletions in the {LDBC}
                  Social Network Benchmark's Data Generator},
  booktitle    = {GRADES-NDA@SIGMOD},
  pages        = {8:1--8:8},
  publisher    = {{ACM}},
  year         = {2020}
}
@inproceedings{DBLP:conf/bcb/ElderW19,
  author       = {C. Shane Elder and
                  Catherine E. Welsh},
  title        = {MitoMut: An Efficient Approach to Detecting Mitochondrial {DNA} Deletions
                  from Paired-end Next-generation Sequencing Data},
  booktitle    = {{BCB}},
  pages        = {177--182},
  publisher    = {{ACM}},
  year         = {2019}
}
@article{DBLP:journals/corr/abs-1907-10125,
  author       = {Debmalya Panigrahi and
                  Shweta Patwa and
                  Sudeepa Roy},
  title        = {Generalized Deletion Propagation on Counting Conjunctive Query Answers},
  journal      = {CoRR},
  volume       = {abs/1907.10125},
  year         = {2019}
}
@article{DBLP:journals/bmcbi/Temple18,
  author       = {Mark D. Temple},
  title        = {A website to identify shared genes in Saccharomyces cerevisiae homozygous
                  deletion library screens},
  journal      = {{BMC} Bioinform.},
  volume       = {19},
  number       = {1},
  pages        = {179:1--179:7},
  year         = {2018}
}
@article{DBLP:journals/fgcs/LiZLL18,
  author       = {Jinqiang Li and
                  Shuming Zhou and
                  Xuequn Li and
                  Xiaowang Li},
  title        = {An insertion-deletion-compensation model with Poisson process for
                  scale-free networks},
  journal      = {Future Gener. Comput. Syst.},
  volume       = {83},
  pages        = {425--430},
  year         = {2018}
}
@article{DBLP:journals/gpb/JiaMZH18,
  author       = {Shangang Jia and
                  Kyla Morton and
                  Chi Zhang and
                  David Holding},
  title        = {An Exome-seq Based Tool for Mapping and Selection of Candidate Genes
                  in Maize Deletion Mutants},
  journal      = {Genom. Proteom. Bioinform.},
  volume       = {16},
  number       = {6},
  pages        = {439--450},
  year         = {2018}
}
@article{DBLP:journals/siamdm/PhilipRS18,
  author       = {Geevarghese Philip and
                  Ashutosh Rai and
                  Saket Saurabh},
  title        = {Generalized Pseudoforest Deletion: Algorithms and Uniform Kernel},
  journal      = {{SIAM} J. Discret. Math.},
  volume       = {32},
  number       = {2},
  pages        = {882--901},
  year         = {2018}
}
@inproceedings{DBLP:conf/bibm/ZhaoTGHZW18,
  author       = {Zhongmeng Zhao and
                  Zewen Tian and
                  Yu Geng and
                  Siyu He and
                  Xuanping Zhang and
                  Jiayin Wang},
  title        = {Correcting genomic deletion calls with complex boundaries from next
                  generation sequencing data},
  booktitle    = {{BIBM}},
  pages        = {1810--1817},
  publisher    = {{IEEE} Computer Society},
  year         = {2018}
}
@inproceedings{DBLP:conf/birthday/SongXP18,
  author       = {Bosheng Song and
                  Fei Xu and
                  Linqiang Pan},
  title        = {On Languages Generated by Context-Free Matrix Insertion-Deletion Systems
                  with Exo-Operations},
  booktitle    = {Enjoying Natural Computing},
  series       = {Lecture Notes in Computer Science},
  volume       = {11270},
  pages        = {279--290},
  publisher    = {Springer},
  year         = {2018}
}
@article{DBLP:journals/corr/abs-1810-09877,
  author       = {Manabu Hagiwara},
  title        = {Perfect Codes for Generalized Deletions from Minuscule Elements of
                  Weyl Groups},
  journal      = {CoRR},
  volume       = {abs/1810.09877},
  year         = {2018}
}
@article{DBLP:journals/bmcbi/BosworthGGL17,
  author       = {Colleen M. Bosworth and
                  Sneha Grandhi and
                  Meetha P. Gould and
                  Thomas LaFramboise},
  title        = {Detection and quantification of mitochondrial {DNA} deletions from
                  next-generation sequence data},
  journal      = {{BMC} Bioinform.},
  volume       = {18},
  number       = {{S-12}},
  pages        = {29--36},
  year         = {2017}
}
@article{DBLP:journals/ijdmb/CaiCZWG17,
  author       = {Lei Cai and
                  Chong Chu and
                  Xiaodong Zhang and
                  Yufeng Wu and
                  Jingyang Gao},
  title        = {Concod: an effective integration framework of consensus-based calling
                  deletions from next-generation sequencing data},
  journal      = {Int. J. Data Min. Bioinform.},
  volume       = {17},
  number       = {2},
  pages        = {153--172},
  year         = {2017}
}
@article{DBLP:journals/jalc/FernauKR17,
  author       = {Henning Fernau and
                  Lakshmanan Kuppusamy and
                  Indhumathi Raman},
  title        = {On the Generative Power of Graph-Controlled Insertion-Deletion Systems
                  with Small Sizes},
  journal      = {J. Autom. Lang. Comb.},
  volume       = {22},
  number       = {1-3},
  pages        = {61--92},
  year         = {2017}
}
@inproceedings{DBLP:conf/dcfs/FernauKR17,
  author       = {Henning Fernau and
                  Lakshmanan Kuppusamy and
                  Indhumathi Raman},
  title        = {Graph-Controlled Insertion-Deletion Systems Generating Language Classes
                  Beyond Linearity},
  booktitle    = {{DCFS}},
  series       = {Lecture Notes in Computer Science},
  volume       = {10316},
  pages        = {128--139},
  publisher    = {Springer},
  year         = {2017}
}
@article{DBLP:journals/bmcbi/Ezawa16a,
  author       = {Kiyoshi Ezawa},
  title        = {General continuous-time Markov model of sequence evolution via insertions/deletions:
                  are alignment probabilities factorable?},
  journal      = {{BMC} Bioinform.},
  volume       = {17},
  pages        = {304:1--304:25},
  year         = {2016}
}
@article{DBLP:journals/bmcbi/Ezawa16b,
  author       = {Kiyoshi Ezawa},
  title        = {General continuous-time Markov model of sequence evolution via insertions/deletions:
                  local alignment probability computation},
  journal      = {{BMC} Bioinform.},
  volume       = {17},
  pages        = {397},
  year         = {2016}
}
@article{DBLP:journals/bmcbi/Ezawa16c,
  author       = {Kiyoshi Ezawa},
  title        = {Erratum to: General continuous-time Markov model of sequence evolution
                  via insertions/deletions: are alignment probabilities factorable?},
  journal      = {{BMC} Bioinform.},
  volume       = {17},
  pages        = {457:1--457:2},
  year         = {2016}
}
@article{DBLP:journals/ijdmb/PanCLCC16,
  author       = {Ren{-}Hao Pan and
                  Rung{-}Ching Chen and
                  Elong Lin and
                  Yung{-}Kuan Chan and
                  Yung{-}fu Chen},
  title        = {Using genetic algorithm and maximum clique to design multiplex {PCR}
                  primers for sequential deletion applications},
  journal      = {Int. J. Data Min. Bioinform.},
  volume       = {14},
  number       = {2},
  pages        = {177--195},
  year         = {2016}
}
@inproceedings{DBLP:conf/dgci/Palagyi16,
  author       = {K{\'{a}}lm{\'{a}}n Pal{\'{a}}gyi},
  title        = {P-Simple Points and General-Simple Deletion Rules},
  booktitle    = {{DGCI}},
  series       = {Lecture Notes in Computer Science},
  volume       = {9647},
  pages        = {143--153},
  publisher    = {Springer},
  year         = {2016}
}
@inproceedings{DBLP:conf/networking/GhaliTW16,
  author       = {Cesar Ghali and
                  Gene Tsudik and
                  Christopher A. Wood},
  title        = {{BEAD:} Best effort autonomous deletion in content-centric networking},
  booktitle    = {Networking},
  pages        = {180--188},
  publisher    = {{IEEE} Computer Society},
  year         = {2016}
}
@inproceedings{DBLP:conf/uc/FernauKR16,
  author       = {Henning Fernau and
                  Lakshmanan Kuppusamy and
                  Indhumathi Raman},
  title        = {Generative Power of Matrix Insertion-Deletion Systems with Context-Free
                  Insertion or Deletion},
  booktitle    = {{UCNC}},
  series       = {Lecture Notes in Computer Science},
  volume       = {9726},
  pages        = {35--48},
  publisher    = {Springer},
  year         = {2016}
}
@article{DBLP:journals/bioinformatics/AllamKS15,
  author       = {Amin Allam and
                  Panos Kalnis and
                  Victor V. Solovyev},
  title        = {Karect: accurate correction of substitution, insertion and deletion
                  errors for next-generation sequencing data},
  journal      = {Bioinform.},
  volume       = {31},
  number       = {21},
  pages        = {3421--3428},
  year         = {2015}
}
@inproceedings{DBLP:conf/mfcs/PhilipRS15,
  author       = {Geevarghese Philip and
                  Ashutosh Rai and
                  Saket Saurabh},
  title        = {Generalized Pseudoforest Deletion: Algorithms and Uniform Kernel},
  booktitle    = {{MFCS} {(2)}},
  series       = {Lecture Notes in Computer Science},
  volume       = {9235},
  pages        = {517--528},
  publisher    = {Springer},
  year         = {2015}
}
@article{DBLP:journals/corr/GhaliTW15,
  author       = {Cesar Ghali and
                  Gene Tsudik and
                  Christopher A. Wood},
  title        = {{BEAD:} Best Effort Autonomous Deletion in Content-Centric Networking},
  journal      = {CoRR},
  volume       = {abs/1512.07311},
  year         = {2015}
}
@article{DBLP:journals/nc/FreundRV14,
  author       = {Rudolf Freund and
                  Yurii Rogozhin and
                  Sergey Verlan},
  title        = {Generating and accepting {P} systems with minimal left and right insertion
                  and deletion},
  journal      = {Nat. Comput.},
  volume       = {13},
  number       = {2},
  pages        = {257--268},
  year         = {2014}
}
@article{DBLP:journals/tcbb/HuZZT14,
  author       = {Fei Hu and
                  Jun Zhou and
                  Lingxi Zhou and
                  Jijun Tang},
  title        = {Probabilistic Reconstruction of Ancestral Gene Orders with Insertions
                  and Deletions},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {11},
  number       = {4},
  pages        = {667--672},
  year         = {2014}
}
@article{DBLP:journals/tcyb/CastelliVS14,
  author       = {Mauro Castelli and
                  Leonardo Vanneschi and
                  Sara Silva},
  title        = {Corrections to "Semantic Search Based Genetic Programming and the
                  Effect of Introns Deletion"},
  journal      = {{IEEE} Trans. Cybern.},
  volume       = {44},
  number       = {4},
  pages        = {565},
  year         = {2014}
}
@article{DBLP:journals/tcyb/CastelliVSAO14,
  author       = {Mauro Castelli and
                  Leonardo Vanneschi and
                  Sara Silva and
                  Alexandros Agapitos and
                  Michael O'Neill},
  title        = {Semantic Search-Based Genetic Programming and the Effect of Intron
                  Deletion},
  journal      = {{IEEE} Trans. Cybern.},
  volume       = {44},
  number       = {1},
  pages        = {103--113},
  year         = {2014}
}
@article{DBLP:journals/bmcbi/ShaoL12,
  author       = {Mingfu Shao and
                  Yu Lin},
  title        = {Approximating the edit distance for genomes with duplicate genes under
                  DCJ, insertion and deletion},
  journal      = {{BMC} Bioinform.},
  volume       = {13},
  number       = {{S-19}},
  pages        = {S13},
  year         = {2012}
}
@article{DBLP:journals/tit/Abdel-GhaffarPFC12,
  author       = {Khaled A. S. Abdel{-}Ghaffar and
                  Filip Paluncic and
                  Hendrik C. Ferreira and
                  Willem A. Clarke},
  title        = {On Helberg's Generalization of the Levenshtein Code for Multiple Deletion/Insertion
                  Error Correction},
  journal      = {{IEEE} Trans. Inf. Theory},
  volume       = {58},
  number       = {3},
  pages        = {1804--1808},
  year         = {2012}
}
@inproceedings{DBLP:conf/cube/ShahI12,
  author       = {Dipalee Shah and
                  Rajesh Ingle},
  title        = {Privacy-preserving deletion to generalization-based anonymous database},
  booktitle    = {{CUBE}},
  pages        = {459--463},
  publisher    = {{ACM}},
  year         = {2012}
}
@inproceedings{DBLP:conf/ssp/WangW12a,
  author       = {Liming Wang and
                  Xiaodong Wang},
  title        = {Gene deletion data based genomic regulatory network inference},
  booktitle    = {{SSP}},
  pages        = {572--575},
  publisher    = {{IEEE}},
  year         = {2012}
}
@article{DBLP:journals/bmcbi/ZiaM11,
  author       = {Amin Zia and
                  Alan M. Moses},
  title        = {Ranking insertion, deletion and nonsense mutations based on their
                  effect on genetic information},
  journal      = {{BMC} Bioinform.},
  volume       = {12},
  pages        = {299},
  year         = {2011}
}
@incollection{DBLP:books/ios/p/KuppusamyMC11,
  author       = {Lakshmanan Kuppusamy and
                  Anand Mahendran and
                  {\'{E}}ric Villemonte de la Clergerie},
  title        = {Modelling Intermolecular Structures and Defining Ambiguity in Gene
                  Sequences using Matrix Insertion-Deletion Systems},
  booktitle    = {Biology, Computation and Linguistics},
  series       = {Frontiers in Artificial Intelligence and Applications},
  volume       = {228},
  pages        = {71--82},
  publisher    = {{IOS} Press},
  year         = {2011}
}
@article{DBLP:journals/neuroimage/EisenbergJB10,
  author       = {Daniel Paul Eisenberg and
                  Mbemba Jabbi and
                  Karen Faith Berman},
  title        = {Bridging the gene-behavior divide through neuroimaging deletion syndromes:
                  Velocardiofacial (22q11.2 Deletion) and Williams (7q11.23 Deletion)
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  author       = {Erwin Marsi and
                  Emiel Krahmer and
                  Iris Hendrickx and
                  Walter Daelemans},
  title        = {On the Limits of Sentence Compression by Deletion},
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  publisher    = {Springer},
  year         = {2010}
}
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  author       = {David Aveiro and
                  Ant{\'{o}}nio Rito Silva and
                  Jos{\'{e}} M. Tribolet},
  title        = {Towards a GOD-theory for organizational engineering: continuously
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                  the enterprise},
  booktitle    = {{SAC}},
  pages        = {150--157},
  publisher    = {{ACM}},
  year         = {2010}
}
@article{DBLP:journals/bmcbi/XuSY09,
  author       = {Zixiang Xu and
                  Xiao Sun and
                  Shihai Yu},
  title        = {Genome-scale analysis to the impact of gene deletion on the metabolism
                  of \emph{E. coli}: constraint-based simulation approach},
  journal      = {{BMC} Bioinform.},
  volume       = {10},
  number       = {{S-1}},
  year         = {2009}
}
@article{DBLP:journals/bmcsb/PacheBA09,
  author       = {Roland A. Pache and
                  M. Madan Babu and
                  Patrick Aloy},
  title        = {Exploiting gene deletion fitness effects in yeast to understand the
                  modular architecture of protein complexes under different growth conditions},
  journal      = {{BMC} Syst. Biol.},
  volume       = {3},
  pages        = {74},
  year         = {2009}
}
@inproceedings{DBLP:conf/isit/Fozunbal09,
  author       = {Majid Fozunbal},
  title        = {A subsequence-histogram method for generic vocabulary recognition
                  over deletion channels},
  booktitle    = {{ISIT}},
  pages        = {2557--2561},
  publisher    = {{IEEE}},
  year         = {2009}
}
@article{DBLP:journals/corr/abs-0904-3351,
  author       = {Majid Fozunbal},
  title        = {A Subsequence-Histogram Method for Generic Vocabulary Recognition
                  over Deletion Channels},
  journal      = {CoRR},
  volume       = {abs/0904.3351},
  year         = {2009}
}
@inproceedings{DBLP:conf/bmei/ZixiangJXX08,
  author       = {Xu Zixiang and
                  Xie Jianming and
                  Yang Xinan and
                  Sun Xiao},
  title        = {Genome-Scale Simulation Analysis: The Impact of Gene Deletion on the
                  Metabolic Flux of E.coli and Its Flux-backbone},
  booktitle    = {{BMEI} {(1)}},
  pages        = {695--699},
  publisher    = {{IEEE} Computer Society},
  year         = {2008}
}
@article{DBLP:journals/bmcbi/MemarianJAMXZSG07,
  author       = {Negar Memarian and
                  Matthew Jessulat and
                  Javad Alirezaie and
                  Nadereh Mir{-}Rashed and
                  Jianhua Xu and
                  Mehri Zareie and
                  Myron Smith and
                  Ashkan Golshani},
  title        = {Colony size measurement of the yeast gene deletion strains for functional
                  genomics},
  journal      = {{BMC} Bioinform.},
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  year         = {2007}
}
@article{DBLP:journals/dcc/TonienS07,
  author       = {Dongvu Tonien and
                  Reihaneh Safavi{-}Naini},
  title        = {Construction of deletion correcting codes using generalized Reed-Solomon
                  codes and their subcodes},
  journal      = {Des. Codes Cryptogr.},
  volume       = {42},
  number       = {2},
  pages        = {227--237},
  year         = {2007}
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@article{DBLP:journals/jcc/SiegertHH07,
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                  Matthias Heuchel and
                  Dieter Hofmann},
  title        = {A generalized direct-particle-deletion scheme for the calculation
                  of chemical potential and solubilities of small- and medium-sized
                  molecules in amorphous polymers},
  journal      = {J. Comput. Chem.},
  volume       = {28},
  number       = {5},
  pages        = {877--889},
  year         = {2007}
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@article{DBLP:journals/jgo/YangS07,
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                  Min Sun},
  title        = {Theoretical Convergence Analysis of a General Division-deletion Algorithm
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  journal      = {J. Glob. Optim.},
  volume       = {37},
  number       = {1},
  pages        = {27--45},
  year         = {2007}
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@inproceedings{DBLP:conf/icde/WuAEA07,
  author       = {Ping Wu and
                  Divyakant Agrawal and
                  {\"{O}}mer Egecioglu and
                  Amr El Abbadi},
  title        = {DeltaSky: Optimal Maintenance of Skyline Deletions without Exclusive
                  Dominance Region Generation},
  booktitle    = {{ICDE}},
  pages        = {486--495},
  publisher    = {{IEEE} Computer Society},
  year         = {2007}
}
@inproceedings{DBLP:conf/sitis/ChungJBM07,
  author       = {Yun{-}Su Chung and
                  Sung{-}Uk Jung and
                  Young{-}Lae Bae and
                  Kiyoung Moon},
  title        = {Face Feature Extraction Using Elliptical Model Based Background Deletion
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  booktitle    = {{SITIS}},
  pages        = {757--762},
  publisher    = {{IEEE} Computer Society},
  year         = {2007}
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@article{DBLP:journals/csda/XuLP06,
  author       = {Liang Xu and
                  Sik{-}Yum Lee and
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  number       = {2},
  pages        = {1131--1146},
  year         = {2006}
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@inproceedings{DBLP:conf/csb/ByrnesL05,
  author       = {Jake K. Byrnes and
                  Wen{-}Hsiung Li},
  title        = {Patterns of Gene Deletion following Genome Duplication in Yeast},
  booktitle    = {{CSB} Workshops},
  pages        = {25--26},
  publisher    = {{IEEE} Computer Society},
  year         = {2005}
}
@inproceedings{DBLP:conf/gecco/Schmitt05,
  author       = {Karlheinz Schmitt},
  title        = {Using gene deletion and gene duplication in evolution strategies},
  booktitle    = {{GECCO}},
  pages        = {919--920},
  publisher    = {{ACM}},
  year         = {2005}
}
@article{DBLP:journals/bioinformatics/KutalikIGHBHCW04,
  author       = {Zolt{\'{a}}n Kutalik and
                  Jacqueline Inwald and
                  Steve V. Gordon and
                  R. Glyn Hewinson and
                  Philip D. Butcher and
                  Jason Hinds and
                  Kwang{-}Hyun Cho and
                  Olaf Wolkenhauer},
  title        = {Advanced significance analysis of microarray data based on weighted
                  resampling: a comparative study and application to gene deletions
                  in Mycobacterium bovis},
  journal      = {Bioinform.},
  volume       = {20},
  number       = {3},
  pages        = {357--363},
  year         = {2004}
}
@article{DBLP:journals/bioinformatics/KyodaBOK04,
  author       = {Koji Kyoda and
                  Kotaro Baba and
                  Shuichi Onami and
                  Hiroaki Kitano},
  title        = {{DBRF-MEGN} method: an algorithm for deducing minimum equivalent gene
                  networks from large-scale gene expression profiles of gene deletion
                  mutants},
  journal      = {Bioinform.},
  volume       = {20},
  number       = {16},
  pages        = {2662--2675},
  year         = {2004}
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@article{DBLP:journals/sac/GomezB04,
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                  Concha Bielza},
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  pages        = {181--198},
  year         = {2004}
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  author       = {Nguyen Xuan Hoai and
                  Robert Ian Mc Kay},
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  booktitle    = {{IEEE} Congress on Evolutionary Computation},
  pages        = {472--477},
  publisher    = {{IEEE}},
  year         = {2004}
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  author       = {Nguyen Xuan Hoai and
                  Robert I. McKay},
  title        = {Softening the Structural Difficulty in Genetic Programming with TAG-Based
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  booktitle    = {{GECCO} {(2)}},
  series       = {Lecture Notes in Computer Science},
  volume       = {3103},
  pages        = {605--616},
  publisher    = {Springer},
  year         = {2004}
}
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                  Tobias Scheffer},
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  year         = {2003}
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                  William Perrizo},
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  year         = {2002}
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  year         = {1992}
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  booktitle    = {Knot Insertion and Deletion Algorithms for B-Spline Curves and Surfaces},
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  publisher    = {{SIAM}},
  year         = {1992}
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  title        = {Gamma thalassemia resulting from the deletion of a gamma-globin gene},
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