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@article{DBLP:journals/bioinformatics/PapanikolaouPNOIP11,
author = {Nikolas Papanikolaou and
Evangelos Pafilis and
Stavros Nikolaou and
Christos A. Ouzounis and
Ioannis Iliopoulos and
Vasilis J. Promponas},
title = {BioTextQuest: a web-based biomedical text mining suite for concept
discovery},
journal = {Bioinform.},
volume = {27},
number = {23},
pages = {3327--3328},
year = {2011},
url = {https://doi.org/10.1093/bioinformatics/btr564},
doi = {10.1093/BIOINFORMATICS/BTR564},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PapanikolaouPNOIP11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AchazBRVC07,
author = {Guillaume Achaz and
Fr{\'{e}}d{\'{e}}ric Boyer and
Eduardo P. C. Rocha and
Alain Viari and
Eric Coissac},
title = {Repseek, a tool to retrieve approximate repeats from large {DNA} sequences},
journal = {Bioinform.},
volume = {23},
number = {1},
pages = {119--121},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl519},
doi = {10.1093/BIOINFORMATICS/BTL519},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AchazBRVC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AlekseyenkoL07,
author = {Alexander V. Alekseyenko and
Christopher J. Lee},
title = {Nested Containment List (NCList): a new algorithm for accelerating
interval query of genome alignment and interval databases},
journal = {Bioinform.},
volume = {23},
number = {11},
pages = {1386--1393},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl647},
doi = {10.1093/BIOINFORMATICS/BTL647},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AlekseyenkoL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AndreopoulosAWFS07,
author = {Bill Andreopoulos and
Aijun An and
Xiaogang Wang and
Michalis Faloutsos and
Michael Schroeder},
title = {Clustering by common friends finds locally significant proteins mediating
modules},
journal = {Bioinform.},
volume = {23},
number = {9},
pages = {1124--1131},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm064},
doi = {10.1093/BIOINFORMATICS/BTM064},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AndreopoulosAWFS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AntaoBL07,
author = {Tiago Antao and
Albano Beja{-}Pereira and
Gordon Luikart},
title = {{MODELER4SIMCOAL2:} {A} user-friendly, extensible modeler of demography
and linked loci for coalescent simulations},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1848--1850},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm243},
doi = {10.1093/BIOINFORMATICS/BTM243},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AntaoBL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AntofieLOPDW07,
author = {A. Antofie and
M. Lateur and
R. Oger and
Andrea Patocchi and
C. E. Durel and
W. E. Van de Weg},
title = {A new versatile database created for geneticists and breeders to link
molecular and phenotypic data in perennial crops: the \emph{AppleBreed
DataBase}},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {882--891},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm013},
doi = {10.1093/BIOINFORMATICS/BTM013},
timestamp = {Wed, 04 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AntofieLOPDW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ArcherR07,
author = {John P. Archer and
David L. Robertson},
title = {\emph{CTree}: comparison of clusters between phylogenetic trees made
easy},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2952--2953},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm410},
doi = {10.1093/BIOINFORMATICS/BTM410},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ArcherR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AuffingerH07,
author = {Pascal Auffinger and
Yaser Hashem},
title = {SwS: a solvation web service for nucleic acids},
journal = {Bioinform.},
volume = {23},
number = {8},
pages = {1035--1037},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm067},
doi = {10.1093/BIOINFORMATICS/BTM067},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AuffingerH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AulchenkoRID07,
author = {Yurii S. Aulchenko and
Stephan Ripke and
Aaron Isaacs and
Cornelia M. van Duijn},
title = {GenABEL: an {R} library for genome-wide association analysis},
journal = {Bioinform.},
volume = {23},
number = {10},
pages = {1294--1296},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm108},
doi = {10.1093/BIOINFORMATICS/BTM108},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/AulchenkoRID07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Avila-CampilloDLRB07,
author = {Iliana Avila{-}Campillo and
Kevin Drew and
John Lin and
David J. Reiss and
Richard Bonneau},
title = {BioNetBuilder: automatic integration of biological networks},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {392--393},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl604},
doi = {10.1093/BIOINFORMATICS/BTL604},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/Avila-CampilloDLRB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BaeTWXK07,
author = {Seung{-}Hee Bae and
Haixu Tang and
Jing Wu and
Jun Xie and
Sun Kim},
title = {dPattern: transcription factor binding site {(TFBS)} discovery in
human genome using a discriminative pattern analysis},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2619--2621},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm288},
doi = {10.1093/BIOINFORMATICS/BTM288},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BaeTWXK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BaekSM07,
author = {Jangsun Baek and
Young Sook Son and
Geoffrey J. McLachlan},
title = {Segmentation and intensity estimation of microarray images using a
gamma-t mixture model},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {458--465},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl630},
doi = {10.1093/BIOINFORMATICS/BTL630},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BaekSM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BagheriSD07,
author = {Neda Bagheri and
J{\"{o}}rg Stelling and
Francis J. Doyle III},
title = {Quantitative performance metrics for robustness in circadian rhythms},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {358--364},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl627},
doi = {10.1093/BIOINFORMATICS/BTL627},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BagheriSD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BaglerS07,
author = {Ganesh Bagler and
Somdatta Sinha},
title = {Assortative mixing in Protein Contact Networks and protein folding
kinetics},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1760--1767},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm257},
doi = {10.1093/BIOINFORMATICS/BTM257},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BaglerS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BainbridgeWHBRJ07,
author = {Matthew N. Bainbridge and
Ren{\'{e}} L. Warren and
An He and
Mikhail Bilenky and
Gordon Robertson and
Steven J. M. Jones},
title = {{THOR:} targeted high-throughput ortholog reconstructor},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2622--2624},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl513},
doi = {10.1093/BIOINFORMATICS/BTL513},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BainbridgeWHBRJ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BaisGV07,
author = {Abha Singh Bais and
Steffen Grossmann and
Martin Vingron},
title = {Simultaneous alignment and annotation of \emph{cis}-regulatory regions},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {44--49},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl305},
doi = {10.1093/BIOINFORMATICS/BTL305},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BaisGV07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BandyopadhyayMM07,
author = {Sanghamitra Bandyopadhyay and
Anirban Mukhopadhyay and
Ujjwal Maulik},
title = {An improved algorithm for clustering gene expression data},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2859--2865},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm418},
doi = {10.1093/BIOINFORMATICS/BTM418},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BandyopadhyayMM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BarkerMP07,
author = {Daniel Barker and
Andrew Meade and
Mark Pagel},
title = {Constrained models of evolution lead to improved prediction of functional
linkage from correlated gain and loss of genes},
journal = {Bioinform.},
volume = {23},
number = {1},
pages = {14--20},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl558},
doi = {10.1093/BIOINFORMATICS/BTL558},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BarkerMP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BarskyGHM07,
author = {Aaron Barsky and
Jennifer L. Gardy and
Robert E. W. Hancock and
Tamara Munzner},
title = {Cerebral: a Cytoscape plugin for layout of and interaction with biological
networks using subcellular localization annotation},
journal = {Bioinform.},
volume = {23},
number = {8},
pages = {1040--1042},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm057},
doi = {10.1093/BIOINFORMATICS/BTM057},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BarskyGHM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BashirLRCB07,
author = {Ali Bashir and
Yu{-}Tsueng Liu and
Benjamin J. Raphael and
Dennis Carson and
Vineet Bafna},
title = {Optimization of primer design for the detection of variable genomic
lesions in cancer},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2807--2815},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm390},
doi = {10.1093/BIOINFORMATICS/BTM390},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BashirLRCB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BatemanF07,
author = {Alex Bateman and
Robert D. Finn},
title = {{SCOOP:} a simple method for identification of novel protein superfamily
relationships},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {809--814},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm034},
doi = {10.1093/BIOINFORMATICS/BTM034},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BatemanF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BattYWB07,
author = {Gr{\'{e}}gory Batt and
Boyan Yordanov and
Ron Weiss and
Calin Belta},
title = {Robustness analysis and tuning of synthetic gene networks},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2415--2422},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm362},
doi = {10.1093/BIOINFORMATICS/BTM362},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/BattYWB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BeasleyP07,
author = {John E. Beasley and
Francisco J. Planes},
title = {Recovering metabolic pathways via optimization},
journal = {Bioinform.},
volume = {23},
number = {1},
pages = {92--98},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl554},
doi = {10.1093/BIOINFORMATICS/BTL554},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BeasleyP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BeaussartWB07,
author = {Francois Beaussart and
January and
Erich Bornberg{-}Bauer},
title = {Automated Improvement of Domain ANnotations using context analysis
of domain arrangements {(AIDAN)}},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1834--1836},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm240},
doi = {10.1093/BIOINFORMATICS/BTM240},
timestamp = {Mon, 12 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/BeaussartWB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BeckerCMMG07,
author = {Emmanuelle Becker and
Aur{\'{e}}lie Cotillard and
Vincent Meyer and
Hocine Madaoui and
Rapha{\"{e}}l Gu{\'{e}}rois},
title = {HMM-Kalign: a tool for generating sub-optimal {HMM} alignments},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {3095--3097},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm492},
doi = {10.1093/BIOINFORMATICS/BTM492},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BeckerCMMG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BeikoC07,
author = {Robert G. Beiko and
Robert L. Charlebois},
title = {A simulation test bed for hypotheses of genome evolution},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {825--831},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm024},
doi = {10.1093/BIOINFORMATICS/BTM024},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/BeikoC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BelloraFA07,
author = {Nicol{\'{a}}s Bellora and
Dom{\`{e}}nec Farr{\'{e}} and
M. Mar Alb{\`{a}}},
title = {{PEAKS:} identification of regulatory motifs by their position in
{DNA} sequences},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {243--244},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl568},
doi = {10.1093/BIOINFORMATICS/BTL568},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BelloraFA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BergerIM07,
author = {Seth I. Berger and
Ravi Iyengar and
Avi Ma'ayan},
title = {{AVIS:} {AJAX} viewer of interactive signaling networks},
journal = {Bioinform.},
volume = {23},
number = {20},
pages = {2803--2805},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm444},
doi = {10.1093/BIOINFORMATICS/BTM444},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BergerIM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BernauerAJP07,
author = {Julie Bernauer and
J{\'{e}}r{\^{o}}me Az{\'{e}} and
Jo{\"{e}}l Janin and
Anne Poupon},
title = {A new protein-protein docking scoring function based on interface
residue properties},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {555--562},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl654},
doi = {10.1093/BIOINFORMATICS/BTL654},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BernauerAJP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BerntMM07,
author = {Matthias Bernt and
Daniel Merkle and
Martin Middendorf},
title = {Using median sets for inferring phylogenetic trees},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {129--135},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl300},
doi = {10.1093/BIOINFORMATICS/BTL300},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/BerntMM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BerntMRFPBSSM07,
author = {Matthias Bernt and
Daniel Merkle and
Kai Ramsch and
Guido Fritzsch and
Marleen Perseke and
Detlef Bernhard and
Martin Schlegel and
Peter F. Stadler and
Martin Middendorf},
title = {CREx: inferring genomic rearrangements based on common intervals},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2957--2958},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm468},
doi = {10.1093/BIOINFORMATICS/BTM468},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/BerntMRFPBSSM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BhardwajSZCL07,
author = {Nitin Bhardwaj and
Robert V. Stahelin and
Guijun Zhao and
Wonhwa Cho and
Hui Lu},
title = {MeTaDoR: a comprehensive resource for membrane targeting domains and
their host proteins},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {3110--3112},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm395},
doi = {10.1093/BIOINFORMATICS/BTM395},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BhardwajSZCL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BhasiPUS07,
author = {Ashwini Bhasi and
Ram Vinay Pandey and
Suriya Prabha Utharasamy and
Periannan Senapathy},
title = {EuSplice: a unified resource for the analysis of splice signals and
alternative splicing in eukaryotic genes},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1815--1823},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm084},
doi = {10.1093/BIOINFORMATICS/BTM084},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BhasiPUS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Bilbao-CastroGF07,
author = {Jose{-}Roman Bilbao{-}Castro and
Inmaculada Garc{\'{\i}}a and
Jos{\'{e}}{-}Jes{\'{u}}s Fern{\'{a}}ndez},
title = {EGEETomo: a user-friendly, fault-tolerant and grid-enabled application
for 3D reconstruction in electron tomography},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3391--3393},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm459},
doi = {10.1093/BIOINFORMATICS/BTM459},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Bilbao-CastroGF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BirzeleGCZ07,
author = {Fabian Birzele and
Jan E. Gewehr and
Gergely Csaba and
Ralf Zimmer},
title = {Vorolign - fast structural alignment using Voronoi contacts},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {205--211},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl294},
doi = {10.1093/BIOINFORMATICS/BTL294},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/BirzeleGCZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BittnerG07,
author = {Thomas Bittner and
Louis J. Goldberg},
title = {The qualitative and time-dependent character of spatial relations
in biomedical ontologies},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1674--1682},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm155},
doi = {10.1093/BIOINFORMATICS/BTM155},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BittnerG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BjorkK07,
author = {Kathe E. Bjork and
Karen Kafadar},
title = {Systematic order-dependent effect in expression values, variance,
detection calls and differential expression in Affymetrix GeneChips{\textregistered}},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2873--2880},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm450},
doi = {10.1093/BIOINFORMATICS/BTM450},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BjorkK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BlomBHBTSRK07,
author = {Evert{-}Jan Blom and
Dinne W. J. Bosman and
Sacha A. F. T. van Hijum and
Rainer Breitling and
Lars Tijsma and
Remko Silvis and
Jos B. T. M. Roerdink and
Oscar P. Kuipers},
title = {{FIVA:} Functional Information Viewer and Analyzer extracting biological
knowledge from transcriptome data of prokaryotes},
journal = {Bioinform.},
volume = {23},
number = {9},
pages = {1161--1163},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl658},
doi = {10.1093/BIOINFORMATICS/BTL658},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/BlomBHBTSRK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Bocker07,
author = {Sebastian B{\"{o}}cker},
title = {Simulating multiplexed {SNP} discovery rates using base-specific cleavage
and mass spectrometry},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {5--12},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl291},
doi = {10.1093/BIOINFORMATICS/BTL291},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Bocker07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BogdanCRB07,
author = {Istv{\'{a}}n A. Bogd{\'{a}}n and
Daniel Coca and
Jenny Rivers and
Robert J. Beynon},
title = {Hardware acceleration of processing of mass spectrometric data for
proteomics},
journal = {Bioinform.},
volume = {23},
number = {6},
pages = {724--731},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl656},
doi = {10.1093/BIOINFORMATICS/BTL656},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BogdanCRB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BorziakZ07,
author = {Kirill Borziak and
Igor B. Zhulin},
title = {{FIST:} a sensory domain for diverse signal transduction pathways
in prokaryotes and ubiquitin signaling in eukaryotes},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2518--2521},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm384},
doi = {10.1093/BIOINFORMATICS/BTM384},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BorziakZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BoulakiaBDF07,
author = {Sarah Cohen Boulakia and
Olivier Biton and
Susan B. Davidson and
Christine Froidevaux},
title = {BioGuideSRS: querying multiple sources with a user-centric perspective},
journal = {Bioinform.},
volume = {23},
number = {10},
pages = {1301--1303},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm088},
doi = {10.1093/BIOINFORMATICS/BTM088},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BoulakiaBDF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Boulesteix07,
author = {Anne{-}Laure Boulesteix},
title = {WilcoxCV: an {R} package for fast variable selection in cross-validation},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1702--1704},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm162},
doi = {10.1093/BIOINFORMATICS/BTM162},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Boulesteix07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BovelstadNSABFL07,
author = {Hege M. B{\o}velstad and
St{\aa}le Nyg{\aa}rd and
H. L. St{\o}rvold and
Magne Aldrin and
{\O}rnulf Borgan and
Arnoldo Frigessi and
Ole Christian Lingj{\ae}rde},
title = {Predicting survival from microarray data - a comparative study},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2080--2087},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm305},
doi = {10.1093/BIOINFORMATICS/BTM305},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/BovelstadNSABFL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BradburyZKCRB07,
author = {Peter J. Bradbury and
Zhiwu Zhang and
Dallas E. Kroon and
Terry M. Casstevens and
Yogesh Ramdoss and
Edward S. Buckler},
title = {{TASSEL:} software for association mapping of complex traits in diverse
samples},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2633--2635},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm308},
doi = {10.1093/BIOINFORMATICS/BTM308},
timestamp = {Wed, 18 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/BradburyZKCRB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BradleyH07,
author = {Robert K. Bradley and
Ian H. Holmes},
title = {Transducers: an emerging probabilistic framework for modeling indels
on trees},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3258--3262},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm402},
doi = {10.1093/BIOINFORMATICS/BTM402},
timestamp = {Tue, 09 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BradleyH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BrameierKM07,
author = {Markus Brameier and
Andrea Krings and
Robert M. MacCallum},
title = {NucPred - Predicting nuclear localization of proteins},
journal = {Bioinform.},
volume = {23},
number = {9},
pages = {1159--1160},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm066},
doi = {10.1093/BIOINFORMATICS/BTM066},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BrameierKM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BrigandB07,
author = {Kevin Le Brigand and
Pascal Barbry},
title = {Mediante: a web-based microarray data manager},
journal = {Bioinform.},
volume = {23},
number = {10},
pages = {1304--1306},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm106},
doi = {10.1093/BIOINFORMATICS/BTM106},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BrigandB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BrilliFL07,
author = {Matteo Brilli and
Renato Fani and
Pietro Li{\`{o}}},
title = {MotifScorer: using a compendium of microarrays to identify regulatory
motifs},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {493--495},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl607},
doi = {10.1093/BIOINFORMATICS/BTL607},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BrilliFL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Brodzik07,
author = {Andrzej K. Brodzik},
title = {Quaternionic periodicity transform: an algebraic solution to the tandem
repeat detection problem},
journal = {Bioinform.},
volume = {23},
number = {6},
pages = {694--700},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl674},
doi = {10.1093/BIOINFORMATICS/BTL674},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Brodzik07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BrynildsenWJL07,
author = {Mark P. Brynildsen and
Tung{-}Yun Wu and
Shi{-}Shang Jang and
James C. Liao},
title = {Biological network mapping and source signal deduction},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1783--1791},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm246},
doi = {10.1093/BIOINFORMATICS/BTM246},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BrynildsenWJL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BuendiaN07,
author = {Patricia Buendia and
Giri Narasimhan},
title = {Sliding MinPD: building evolutionary networks of serial samples via
an automated recombination detection approach},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {2993--3000},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm413},
doi = {10.1093/BIOINFORMATICS/BTM413},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/BuendiaN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BunessKRPST07,
author = {Andreas Buness and
Ruprecht Kuner and
Markus Ruschhaupt and
Annemarie Poustka and
Holger S{\"{u}}ltmann and
Achim Tresch},
title = {Identification of aberrant chromosomal regions from gene expression
microarray studies applied to human breast cancer},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2273--2280},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm340},
doi = {10.1093/BIOINFORMATICS/BTM340},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BunessKRPST07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BurkartWHPG07,
author = {Mark F. Burkart and
Jonathan D. Wren and
Jason I. Herschkowitz and
Charles M. Perou and
Harold R. Garner},
title = {Clustering microarray-derived gene lists through implicit literature
relationships},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {1995--2003},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm261},
doi = {10.1093/BIOINFORMATICS/BTM261},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BurkartWHPG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CaiHGP07,
author = {Yizhi Cai and
Brian Hartnett and
Claes Gustafsson and
Jean Peccoud},
title = {A syntactic model to design and verify synthetic genetic constructs
derived from standard biological parts},
journal = {Bioinform.},
volume = {23},
number = {20},
pages = {2760--2767},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm446},
doi = {10.1093/BIOINFORMATICS/BTM446},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CaiHGP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CaiHL07,
author = {Xiaohui Cai and
Haiyan Hu and
Xiaoman Shawn Li},
title = {Tree Gibbs Sampler: identifying conserved motifs without aligning
orthologous sequences},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {2013--2014},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm282},
doi = {10.1093/BIOINFORMATICS/BTM282},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CaiHL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CakmakO07,
author = {Ali Cakmak and
Gultekin {\"{O}}zsoyoglu},
title = {Mining biological networks for unknown pathways},
journal = {Bioinform.},
volume = {23},
number = {20},
pages = {2775--2783},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm409},
doi = {10.1093/BIOINFORMATICS/BTM409},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CakmakO07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CallebautMM07,
author = {Isabelle Callebaut and
Jean Paul Mornon and
Philippe Monget},
title = {Isolated {ZP-N} domains constitute the N-terminal extensions of Zona
Pellucida proteins},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {1871--1874},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm265},
doi = {10.1093/BIOINFORMATICS/BTM265},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CallebautMM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Cammer07,
author = {Stephen A. Cammer},
title = {SChiSM2: creating interactive web page annotations of molecular structure
models using Jmol},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {383--384},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl603},
doi = {10.1093/BIOINFORMATICS/BTL603},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Cammer07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CaporasoBRCH07,
author = {J. Gregory Caporaso and
William A. Baumgartner Jr. and
David A. Randolph and
K. Bretonnel Cohen and
Lawrence Hunter},
title = {MutationFinder: a high-performance system for extracting point mutation
mentions from text},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1862--1865},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm235},
doi = {10.1093/BIOINFORMATICS/BTM235},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CaporasoBRCH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CapraS07,
author = {John A. Capra and
Mona Singh},
title = {Predicting functionally important residues from sequence conservation},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {1875--1882},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm270},
doi = {10.1093/BIOINFORMATICS/BTM270},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/CapraS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CapreraLSMCM07,
author = {Andrea Caprera and
Barbara Lazzari and
Alessandra Stella and
Ivan Merelli and
Alexandre R. Caetano and
Paola Mariani},
title = {GoSh: a web-based database for goat and sheep {EST} sequences},
journal = {Bioinform.},
volume = {23},
number = {8},
pages = {1043--1045},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm063},
doi = {10.1093/BIOINFORMATICS/BTM063},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CapreraLSMCM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CapriottiC07,
author = {Emidio Capriotti and
Rita Casadio},
title = {K-Fold: a tool for the prediction of the protein folding kinetic order
and rate},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {385--386},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl610},
doi = {10.1093/BIOINFORMATICS/BTL610},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CapriottiC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CareNBW07,
author = {Matthew A. Care and
Chris J. Needham and
Andrew J. Bulpitt and
David R. Westhead},
title = {Deleterious {SNP} prediction: be mindful of your training data!},
journal = {Bioinform.},
volume = {23},
number = {6},
pages = {664--672},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl649},
doi = {10.1093/BIOINFORMATICS/BTL649},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/CareNBW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CareyMFLG07,
author = {Vincent J. Carey and
Martin Morgan and
Seth Falcon and
Ross Lazarus and
Robert Gentleman},
title = {GGtools: analysis of genetics of gene expression in bioconductor},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {522--523},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl628},
doi = {10.1093/BIOINFORMATICS/BTL628},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CareyMFLG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Carlson07,
author = {Ross P. Carlson},
title = {Metabolic systems cost-benefit analysis for interpreting network structure
and regulation},
journal = {Bioinform.},
volume = {23},
number = {10},
pages = {1258--1264},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm082},
doi = {10.1093/BIOINFORMATICS/BTM082},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Carlson07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Carlson07a,
author = {Ross P. Carlson},
title = {Metabolic systems cost-benefit analysis for interpreting network structure
and regulation - Erratum},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2202},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm318},
doi = {10.1093/BIOINFORMATICS/BTM318},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Carlson07a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CarrollBOECSM07,
author = {Hyrum Carroll and
Wesley A. Beckstead and
Timothy O'Connor and
Mark T. W. Ebbert and
Mark J. Clement and
Quinn Snell and
David A. McClellan},
title = {{DNA} reference alignment benchmarks based on tertiary structure of
encoded proteins},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2648--2649},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm389},
doi = {10.1093/BIOINFORMATICS/BTM389},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/CarrollBOECSM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Cartwright07,
author = {Reed A. Cartwright},
title = {Ngila: global pairwise alignments with logarithmic and affine gap
costs},
journal = {Bioinform.},
volume = {23},
number = {11},
pages = {1427--1428},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm095},
doi = {10.1093/BIOINFORMATICS/BTM095},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Cartwright07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CastiglioneDJLHT07,
author = {Filippo Castiglione and
Karen Duca and
Abdul Salam Jarrah and
Reinhard C. Laubenbacher and
Donna Hochberg and
David Thorley{-}Lawson},
title = {Simulating Epstein-Barr virus infection with C-ImmSim},
journal = {Bioinform.},
volume = {23},
number = {11},
pages = {1371--1377},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm044},
doi = {10.1093/BIOINFORMATICS/BTM044},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/CastiglioneDJLHT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CastiglionePBM07,
author = {Filippo Castiglione and
Francesco Pappalardo and
Massimo Bernaschi and
Santo Motta},
title = {Optimization of {HAART} with genetic algorithms and agent-based models
of {HIV} infection},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3350--3355},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm408},
doi = {10.1093/BIOINFORMATICS/BTM408},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/CastiglionePBM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CathelinLK07,
author = {R. Cathelin and
F. Lopez and
Christophe Klopp},
title = {AGScan: a pluggable microarray image quantification software based
on the ImageJ library},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {247--248},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl564},
doi = {10.1093/BIOINFORMATICS/BTL564},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CathelinLK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CavalieriCTMKGAD07,
author = {Duccio Cavalieri and
Cinzia Castagnini and
Simona Toti and
Karolina Maciag and
Thomas Kelder and
Luca Gambineri and
Samuele Angioli and
Piero Dolara},
title = {Eu.Gene Analyzer a tool for integrating gene expression data with
pathway databases},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2631--2632},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm333},
doi = {10.1093/BIOINFORMATICS/BTM333},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CavalieriCTMKGAD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CeroniCF07,
author = {Alessio Ceroni and
Fabrizio Costa and
Paolo Frasconi},
title = {Classification of small molecules by two- and three-dimensional decomposition
kernels},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2038--2045},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm298},
doi = {10.1093/BIOINFORMATICS/BTM298},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CeroniCF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChakravartyCKDG07,
author = {Arijit Chakravarty and
Jonathan M. Carlson and
Radhika S. Khetani and
Charles E. DeZiel and
Robert H. Gross},
title = {{SPACER:} identification of \emph{cis}-regulatory elements with non-contiguous
critical residues},
journal = {Bioinform.},
volume = {23},
number = {8},
pages = {1029--1031},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm041},
doi = {10.1093/BIOINFORMATICS/BTM041},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChakravartyCKDG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Chandonia07,
author = {John{-}Marc Chandonia},
title = {StrBioLib: a Java library for development of custom computational
structural biology applications},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {2018--2020},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm269},
doi = {10.1093/BIOINFORMATICS/BTM269},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Chandonia07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChenDR07,
author = {Pao{-}Yang Chen and
Charlotte M. Deane and
Gesine Reinert},
title = {A statistical approach using network structure in the prediction of
protein characteristics},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2314--2321},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm342},
doi = {10.1093/BIOINFORMATICS/BTM342},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChenDR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChenK07,
author = {Ke Chen and
Lukasz A. Kurgan},
title = {{PFRES:} protein fold classification by using evolutionary information
and predicted secondary structure},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2843--2850},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm475},
doi = {10.1093/BIOINFORMATICS/BTM475},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChenK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChenLDCT07,
author = {James J. Chen and
Taewon Lee and
Robert R. Delongchamp and
Tao Chen and
Chen{-}An Tsai},
title = {Significance analysis of groups of genes in expression profiling studies},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2104--2112},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm310},
doi = {10.1093/BIOINFORMATICS/BTM310},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChenLDCT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChenLSWB07,
author = {Jonathan H. Chen and
Erik Linstead and
Sanjay Joshua Swamidass and
Dennis Wang and
Pierre Baldi},
title = {ChemDB update - full-text search and virtual chemical space},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2348--2351},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm341},
doi = {10.1093/BIOINFORMATICS/BTM341},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChenLSWB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChenMLS07,
author = {Zhongxue Chen and
Monnie McGee and
Qingzhong Liu and
Richard H. Scheuermann},
title = {A distribution free summarization method for Affymetrix GeneChip\({}^{\mbox{{\textregistered}}}\)
arrays},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {321--327},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl609},
doi = {10.1093/BIOINFORMATICS/BTL609},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChenMLS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChenZF07,
author = {Jianping Chen and
Xi Zhang and
Ariel Fern{\'{a}}ndez},
title = {Molecular basis for specificity in the druggable kinome: sequence-based
analysis},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {563--572},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl666},
doi = {10.1093/BIOINFORMATICS/BTL666},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChenZF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChenZLNLSRS07,
author = {Jiusheng Chen and
Haoran Zheng and
Haiyan Liu and
Junqing Niu and
Jianping Liu and
Tie Shen and
Bin Rui and
Yunyu Shi},
title = {Improving metabolic flux estimation via evolutionary optimization
for convex solution space},
journal = {Bioinform.},
volume = {23},
number = {9},
pages = {1115--1123},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm050},
doi = {10.1093/BIOINFORMATICS/BTM050},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChenZLNLSRS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChengLSL07,
author = {Kin{-}On Cheng and
Ngai{-}Fong Law and
Wan{-}Chi Siu and
T. H. Lau},
title = {BiVisu: software tool for bicluster detection and visualization},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2342--2344},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm338},
doi = {10.1093/BIOINFORMATICS/BTM338},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChengLSL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChengSJK07,
author = {Haitao Cheng and
Taner Z. Sen and
Robert L. Jernigan and
Andrzej Kloczkowski},
title = {Consensus Data Mining {(CDM)} Protein Secondary Structure Prediction
Server: Combining {GOR} {V} and Fragment Database Mining {(FDM)}},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2628--2630},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm379},
doi = {10.1093/BIOINFORMATICS/BTM379},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChengSJK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChingZNA07,
author = {Wai{-}Ki Ching and
Shuqin Zhang and
Michael K. Ng and
Tatsuya Akutsu},
title = {An approximation method for solving the steady-state probability distribution
of probabilistic Boolean networks},
journal = {Bioinform.},
volume = {23},
number = {12},
pages = {1511--1518},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm142},
doi = {10.1093/BIOINFORMATICS/BTM142},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChingZNA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChuaSW07,
author = {Hon Nian Chua and
Wing{-}Kin Sung and
Limsoon Wong},
title = {An efficient strategy for extensive integration of diverse biological
data for protein function prediction},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3364--3373},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm520},
doi = {10.1093/BIOINFORMATICS/BTM520},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChuaSW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChungBSB07,
author = {Jo{-}Lan Chung and
John E. Beaver and
Eric D. Scheeff and
Philip E. Bourne},
title = {Con-Struct Map: a comparative contact map analysis tool},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2491--2492},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm356},
doi = {10.1093/BIOINFORMATICS/BTM356},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChungBSB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChungLEP07,
author = {Yujin Chung and
Seung Yeoun Lee and
Robert C. Elston and
Taesung Park},
title = {Odds ratio based multifactor-dimensionality reduction method for detecting
gene-gene interactions},
journal = {Bioinform.},
volume = {23},
number = {1},
pages = {71--76},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl557},
doi = {10.1093/BIOINFORMATICS/BTL557},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChungLEP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ClementeSV07,
author = {Jos{\'{e}} Carlos Clemente and
Kenji Satou and
Gabriel Valiente},
title = {Phylogenetic reconstruction from non-genomic data},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {110--115},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl307},
doi = {10.1093/BIOINFORMATICS/BTL307},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ClementeSV07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CockellOJ07,
author = {Simon J. Cockell and
Baldo Oliva and
Richard M. Jackson},
title = {Structure-based evaluation of \emph{in silico} predictions of protein-protein
interactions using Comparative Docking},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {573--581},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl661},
doi = {10.1093/BIOINFORMATICS/BTL661},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CockellOJ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CoghlanD07,
author = {Avril Coghlan and
Richard Durbin},
title = {Genomix: a method for combining gene-finders' predictions, which uses
evolutionary conservation of sequence and intron-exon structure},
journal = {Bioinform.},
volume = {23},
number = {12},
pages = {1468--1475},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm133},
doi = {10.1093/BIOINFORMATICS/BTM133},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CoghlanD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Contreras-MoreiraBC07,
author = {Bruno Contreras{-}Moreira and
Pierre{-}Alain Branger and
Julio Collado{-}Vides},
title = {TFmodeller: comparative modelling of protein-DNA complexes},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1694--1696},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm148},
doi = {10.1093/BIOINFORMATICS/BTM148},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Contreras-MoreiraBC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CrangleCHZ07,
author = {Colleen E. Crangle and
J. Michael Cherry and
Eurie L. Hong and
Alex Zbyslaw},
title = {Mining experimental evidence of molecular function claims from the
literature},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3232--3240},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm495},
doi = {10.1093/BIOINFORMATICS/BTM495},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CrangleCHZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DaiWJWM07,
author = {Manhong Dai and
Pinglang Wang and
Elvis Jakupovic and
Stanley J. Watson and
Fan Meng},
title = {Web-based GeneChip analysis system for large-scale collaborative projects},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2185--2187},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm297},
doi = {10.1093/BIOINFORMATICS/BTM297},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DaiWJWM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DaltonJ07,
author = {James A. R. Dalton and
Richard M. Jackson},
title = {An evaluation of automated homology modelling methods at low target-template
sequence similarity},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {1901--1908},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm262},
doi = {10.1093/BIOINFORMATICS/BTM262},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DaltonJ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DaskalakisCBKGKKAN07,
author = {Antonis Daskalakis and
Dionisis A. Cavouras and
Panagiotis Bougioukos and
Spiros Kostopoulos and
Dimitris Glotsos and
Ioannis Kalatzis and
George C. Kagadis and
Christos Argyropoulos and
George Nikiforidis},
title = {Improving gene quantification by adjustable spot-image restoration},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2265--2272},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm337},
doi = {10.1093/BIOINFORMATICS/BTM337},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/DaskalakisCBKGKKAN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DaveySDR07,
author = {Robert P. Davey and
George Savva and
Jo L. Dicks and
Ian N. Roberts},
title = {{MPP:} a microarray-to-phylogeny pipeline for analysis of gene and
marker content datasets},
journal = {Bioinform.},
volume = {23},
number = {8},
pages = {1023--1025},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm038},
doi = {10.1093/BIOINFORMATICS/BTM038},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DaveySDR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DaviesJMT07,
author = {J. R. Davies and
Richard M. Jackson and
Kanti V. Mardia and
Charles C. Taylor},
title = {The Poisson Index: a new probabilistic model for protein-ligand binding
site similarity},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {3001--3008},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm470},
doi = {10.1093/BIOINFORMATICS/BTM470},
timestamp = {Fri, 22 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/DaviesJMT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DaviesSFMTF07,
author = {Matthew N. Davies and
Andrew Secker and
Alex Alves Freitas and
Miguel Mendao and
Jonathan Timmis and
Darren R. Flower},
title = {On the hierarchical classification of {G} protein-coupled receptors},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3113--3118},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm506},
doi = {10.1093/BIOINFORMATICS/BTM506},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DaviesSFMTF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DavisM07,
author = {Sean R. Davis and
Paul S. Meltzer},
title = {GEOquery: a bridge between the Gene Expression Omnibus {(GEO)} and
BioConductor},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1846--1847},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm254},
doi = {10.1093/BIOINFORMATICS/BTM254},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DavisM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Day-RichterHHL07,
author = {John Day{-}Richter and
Midori A. Harris and
Melissa A. Haendel and
Suzanna Lewis},
title = {OBO-Edit - an ontology editor for biologists},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2198--2200},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm112},
doi = {10.1093/BIOINFORMATICS/BTM112},
timestamp = {Thu, 16 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/Day-RichterHHL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DayHTSN07,
author = {Nathan Day and
Andrew Hemmaplardh and
Robert E. Thurman and
John A. Stamatoyannopoulos and
William Stafford Noble},
title = {Unsupervised segmentation of continuous genomic data},
journal = {Bioinform.},
volume = {23},
number = {11},
pages = {1424--1426},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm096},
doi = {10.1093/BIOINFORMATICS/BTM096},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DayHTSN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DelcherBPS07,
author = {Arthur L. Delcher and
Kirsten A. Bratke and
Edwin C. Powers and
Steven Salzberg},
title = {Identifying bacterial genes and endosymbiont {DNA} with Glimmer},
journal = {Bioinform.},
volume = {23},
number = {6},
pages = {673--679},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm009},
doi = {10.1093/BIOINFORMATICS/BTM009},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DelcherBPS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DengNLMM07,
author = {Wenjie Deng and
David C. Nickle and
Gerald H. Learn and
Brandon Maust and
James I. Mullins},
title = {ViroBLAST: a stand-alone {BLAST} web server for flexible queries of
multiple databases and user's datasets},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2334--2336},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm331},
doi = {10.1093/BIOINFORMATICS/BTM331},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DengNLMM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DerrienAGH07,
author = {Thomas Derrien and
Catherine Andr{\'{e}} and
Francis Galibert and
Christophe Hitte},
title = {AutoGRAPH: an interactive web server for automating and visualizing
comparative genome maps},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {498--499},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl618},
doi = {10.1093/BIOINFORMATICS/BTL618},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/DerrienAGH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DeutschK07,
author = {Christopher Deutsch and
Bala Krishnamoorthy},
title = {Four-Body Scoring Function for Mutagenesis},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {3009--3015},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm481},
doi = {10.1093/BIOINFORMATICS/BTM481},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DeutschK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DhollanderSLMMM07,
author = {Thomas Dhollander and
Qizheng Sheng and
Karen Lemmens and
Bart De Moor and
Kathleen Marchal and
Yves Moreau},
title = {Query-driven module discovery in microarray data},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2573--2580},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm387},
doi = {10.1093/BIOINFORMATICS/BTM387},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/DhollanderSLMMM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DiMaioKBSBPS07,
author = {Frank DiMaio and
Dmitry A. Kondrashov and
Eduard Bitto and
Ameet Soni and
Craig A. Bingman and
George N. Phillips Jr. and
Jude W. Shavlik},
title = {Creating protein models from electron-density maps using particle-filtering
methods},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2851--2858},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm480},
doi = {10.1093/BIOINFORMATICS/BTM480},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/DiMaioKBSBPS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DicksTSRYMTBMRJDEFGGSSFW07,
author = {E. Dicks and
Jon W. Teague and
P. Stephens and
Keiran Raine and
Andrew D. Yates and
C. Mattocks and
P. Tarpey and
Adam P. Butler and
Andrew Menzies and
David Richardson and
Andrew M. Jenkinson and
H. Davies and
S. Edkins and
Simon A. Forbes and
Kristian A. Gray and
C. Greenman and
Rebecca Shepherd and
Michael R. Stratton and
P. Andrew Futreal and
R. Wooster},
title = {AutoCSA, an algorithm for high throughput {DNA} sequence variant detection
in cancer genomes},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1689--1691},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm152},
doi = {10.1093/BIOINFORMATICS/BTM152},
timestamp = {Sun, 29 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/DicksTSRYMTBMRJDEFGGSSFW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DiehlLSB07,
author = {Alexander D. Diehl and
Jamie A. Lee and
Richard H. Scheuermann and
Judith A. Blake},
title = {Ontology development for biological systems: immunology},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {913--915},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm029},
doi = {10.1093/BIOINFORMATICS/BTM029},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DiehlLSB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DietterMFRWS07,
author = {Johannes Dietter and
Manuel Mattheisen and
Robert F{\"{u}}rst and
Franz R{\"{u}}schendorf and
Thomas F. Wienker and
Konstantin Strauch},
title = {Linkage analysis using sex-specific recombination fractions with {GENEHUNTER-MODSCORE}},
journal = {Bioinform.},
volume = {23},
number = {1},
pages = {64--70},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl539},
doi = {10.1093/BIOINFORMATICS/BTL539},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DietterMFRWS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DiezAD07,
author = {Diego Diez and
Rebeca Alvarez and
Ana Dopazo},
title = {Codelink: an {R} package for analysis of {GE} healthcare gene expression
bioarrays},
journal = {Bioinform.},
volume = {23},
number = {9},
pages = {1168--1169},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm072},
doi = {10.1093/BIOINFORMATICS/BTM072},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/DiezAD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DinkelS07,
author = {Holger Dinkel and
Heinrich Sticht},
title = {A computational strategy for the prediction of functional linear peptide
motifs in proteins},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3297--3303},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm524},
doi = {10.1093/BIOINFORMATICS/BTM524},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DinkelS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DixonES07,
author = {Richard J. Dixon and
Ian C. Eperon and
Nilesh J. Samani},
title = {Complementary intron sequence motifs associated with human exon repetition:
a role for intragenic, inter-transcript interactions in gene expression},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {150--155},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl575},
doi = {10.1093/BIOINFORMATICS/BTL575},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DixonES07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DobrzynskiRKB07,
author = {Maciej Dobrzynski and
Jordi Vidal Rodr{\'{\i}}guez and
Jaap A. Kaandorp and
Joke G. Blom},
title = {Computational methods for diffusion-influenced biochemical reactions},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {1969--1977},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm278},
doi = {10.1093/BIOINFORMATICS/BTM278},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DobrzynskiRKB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DominguesRL07,
author = {Francisco S. Domingues and
J{\"{o}}rg Rahnenf{\"{u}}hrer and
Thomas Lengauer},
title = {Conformational analysis of alternative protein structures},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3131--3138},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm499},
doi = {10.1093/BIOINFORMATICS/BTM499},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DominguesRL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DoranRFSSC07,
author = {Michael V. Doran and
Daniela Stan Raicu and
Jacob D. Furst and
Raffaella Settimi and
Matthew Schipma and
Darrell P. Chandler},
title = {Oligonucleotide microarray identification of \emph{Bacillus anthracis}
strains using support vector machines},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {487--492},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl626},
doi = {10.1093/BIOINFORMATICS/BTL626},
timestamp = {Thu, 14 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DoranRFSSC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Dotan-CohenMK07,
author = {Dikla Dotan{-}Cohen and
Avraham A. Melkman and
Simon Kasif},
title = {Hierarchical tree snipping: clustering guided by prior knowledge},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3335--3342},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm526},
doi = {10.1093/BIOINFORMATICS/BTM526},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Dotan-CohenMK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DuSPA07,
author = {Peicheng Du and
Rajagopalan Sudha and
Michael B. Prystowsky and
Ruth Hogue Angeletti},
title = {Data reduction of isotope-resolved {LC-MS} spectra},
journal = {Bioinform.},
volume = {23},
number = {11},
pages = {1394--1400},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm083},
doi = {10.1093/BIOINFORMATICS/BTM083},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DuSPA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DuZY07,
author = {Liping Du and
Hongxia Zhou and
Hong Yan},
title = {{OMWSA:} detection of {DNA} repeats using moving window spectral analysis},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {631--633},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm008},
doi = {10.1093/BIOINFORMATICS/BTM008},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DuZY07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DunningSRT07,
author = {Mark J. Dunning and
Mike L. Smith and
Matthew E. Ritchie and
Simon Tavar{\'{e}}},
title = {beadarray: {R} classes and methods for Illumina bead-based data},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2183--2184},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm311},
doi = {10.1093/BIOINFORMATICS/BTM311},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/DunningSRT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DutilhNHBSH07,
author = {Bas E. Dutilh and
Vera van Noort and
Ren{\'{e}} T. J. M. van der Heijden and
T. Boekhout and
Berend Snel and
Martijn A. Huynen},
title = {Assessment of phylogenomic and orthology approaches for phylogenetic
inference},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {815--824},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm015},
doi = {10.1093/BIOINFORMATICS/BTM015},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DutilhNHBSH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DuttaC07,
author = {Debojyoti Dutta and
Ting Chen},
title = {Speeding up tandem mass spectrometry database search: metric embeddings
and fast near neighbor search},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {612--618},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl645},
doi = {10.1093/BIOINFORMATICS/BTL645},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DuttaC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ElatiNBBRR07,
author = {Mohamed Elati and
Pierre Neuvial and
Monique Bolotin{-}Fukuhara and
Emmanuel Barillot and
Fran{\c{c}}ois Radvanyi and
C{\'{e}}line Rouveirol},
title = {{LICORN:} learning cooperative regulation networks from gene expression
data},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2407--2414},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm352},
doi = {10.1093/BIOINFORMATICS/BTM352},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ElatiNBBRR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/EloJOLA07,
author = {Laura Elo and
Henna J{\"{a}}rvenp{\"{a}}{\"{a}} and
Matej Oresic and
Riitta Lahesmaa and
Tero Aittokallio},
title = {Systematic construction of gene coexpression networks with applications
to human {T} helper cell differentiation process},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2096--2103},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm309},
doi = {10.1093/BIOINFORMATICS/BTM309},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/EloJOLA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/EnaultFBF07,
author = {Fran{\c{c}}ois Enault and
Romain Fremez and
Eric Baranowski and
Thomas Faraut},
title = {Alvira: comparative genomics of viral strains},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2178--2179},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm293},
doi = {10.1093/BIOINFORMATICS/BTM293},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/EnaultFBF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/EnglishB07,
author = {Sangeeta B. English and
Atul J. Butte},
title = {Evaluation and integration of 49 genome-wide experiments and the prediction
of previously unknown obesity-related genes},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2910--2917},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm483},
doi = {10.1093/BIOINFORMATICS/BTM483},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/EnglishB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/EnoshFBH07,
author = {Angela Enosh and
Sarel Jacob Fleishman and
Nir Ben{-}Tal and
Dan Halperin},
title = {Prediction and simulation of motion in pairs of transmembrane alpha-helices},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {212--218},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl325},
doi = {10.1093/BIOINFORMATICS/BTL325},
timestamp = {Thu, 15 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/EnoshFBH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/EschrichH07,
author = {Steven Eschrich and
Andrew M. Hoerter},
title = {Libaffy: software for processing Affymetrix(R) GeneChip(R) data},
journal = {Bioinform.},
volume = {23},
number = {12},
pages = {1562--1564},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm127},
doi = {10.1093/BIOINFORMATICS/BTM127},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/EschrichH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/EyalPB07,
author = {Eran Eyal and
Shmuel Pietrokovski and
Ivet Bahar},
title = {Rapid assessment of correlated amino acids from pair-to-pair {(P2P)}
substitution matrices},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1837--1839},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm256},
doi = {10.1093/BIOINFORMATICS/BTM256},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/EyalPB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FalconG07,
author = {Seth Falcon and
Robert Gentleman},
title = {Using GOstats to test gene lists for {GO} term association},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {257--258},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl567},
doi = {10.1093/BIOINFORMATICS/BTL567},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FalconG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FalknerFA07,
author = {J. A. Falkner and
J. W. Falkner and
P. C. Andrews},
title = {ProteomeCommons.org {IO} Framework: reading and writing multiple proteomics
data formats},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {262--263},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl573},
doi = {10.1093/BIOINFORMATICS/BTL573},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FalknerFA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FanN07,
author = {Jianqing Fan and
Yue Niu},
title = {Selection and validation of normalization methods for c-DNA microarrays
using within-array replications},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2391--2398},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm361},
doi = {10.1093/BIOINFORMATICS/BTM361},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/FanN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FangDMSD07,
author = {Fang Fang and
Jing Ding and
Vladimir N. Minin and
Marc A. Suchard and
Karin S. Dorman},
title = {cBrother: relaxing parental tree assumptions for Bayesian recombination
detection},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {507--508},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl613},
doi = {10.1093/BIOINFORMATICS/BTL613},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FangDMSD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FarautGCDGHS07,
author = {Thomas Faraut and
Simon de Givry and
Patrick Chabrier and
Thomas Derrien and
Francis Galibert and
Christophe Hitte and
Thomas Schiex},
title = {A comparative genome approach to marker ordering},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {50--56},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl321},
doi = {10.1093/BIOINFORMATICS/BTL321},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/FarautGCDGHS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Farrar07,
author = {Michael Farrar},
title = {Striped Smith-Waterman speeds database searches six times over other
{SIMD} implementations},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {156--161},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl582},
doi = {10.1093/BIOINFORMATICS/BTL582},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Farrar07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FengNC07,
author = {Jian Feng and
Daniel Q. Naiman and
Bret Cooper},
title = {Probability-based pattern recognition and statistical framework for
randomization: modeling tandem mass spectrum/peptide sequence false
match frequencies},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2210--2217},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm267},
doi = {10.1093/BIOINFORMATICS/BTM267},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FengNC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FengT07,
author = {Shengzhong Feng and
Elisabeth R. M. Tillier},
title = {A fast and flexible approach to oligonucleotide probe design for genomes
and gene families},
journal = {Bioinform.},
volume = {23},
number = {10},
pages = {1195--1202},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm114},
doi = {10.1093/BIOINFORMATICS/BTM114},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FengT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Fernandez-FuentesRMFF07,
author = {Narcis Fernandez{-}Fuentes and
Brajesh Kumar Rai and
Carlos J. Madrid{-}Aliste and
J. Eduardo Fajardo and
Andr{\'{a}}s Fiser},
title = {Comparative protein structure modeling by combining multiple templates
and optimizing sequence-to-structure alignments},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2558--2565},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm377},
doi = {10.1093/BIOINFORMATICS/BTM377},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Fernandez-FuentesRMFF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FerroGPPSBS07,
author = {Alfredo Ferro and
Rosalba Giugno and
Giuseppe Pigola and
Alfredo Pulvirenti and
Dmitry Skripin and
Gary D. Bader and
Dennis E. Shasha},
title = {NetMatch: a Cytoscape plugin for searching biological networks},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {910--912},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm032},
doi = {10.1093/BIOINFORMATICS/BTM032},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/FerroGPPSBS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FevreSS07,
author = {Fran{\c{c}}ois Le F{\`{e}}vre and
Serge Smidtas and
Vincent Sch{\"{a}}chter},
title = {Cyclone: java-based querying and computing with Pathway/Genome databases},
journal = {Bioinform.},
volume = {23},
number = {10},
pages = {1299--1300},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm107},
doi = {10.1093/BIOINFORMATICS/BTM107},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FevreSS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FinnSJKCP07,
author = {Robert D. Finn and
James W. Stalker and
David K. Jackson and
Eugene Kulesha and
Jody Clements and
Roger Pettett},
title = {ProServer: a simple, extensible Perl {DAS} server},
journal = {Bioinform.},
volume = {23},
number = {12},
pages = {1568--1570},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl650},
doi = {10.1093/BIOINFORMATICS/BTL650},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/FinnSJKCP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FischerKSWFP07,
author = {Markus Fischer and
Michael Knoll and
Demet Sirim and
Florian Wagner and
Sonja Funke and
J{\"{u}}rgen Pleiss},
title = {The Cytochrome {P450} Engineering Database: a navigation and prediction
tool for the cytochrome {P450} protein family},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {2015--2017},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm268},
doi = {10.1093/BIOINFORMATICS/BTM268},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FischerKSWFP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FishelKR07,
author = {Irit Fishel and
Alon Kaufman and
Eytan Ruppin},
title = {Meta-analysis of gene expression data: a predictor-based approach},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1599--1606},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm149},
doi = {10.1093/BIOINFORMATICS/BTM149},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FishelKR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FjellHC07,
author = {Christopher D. Fjell and
Robert E. W. Hancock and
Artem Cherkasov},
title = {AMPer: a database and an automated discovery tool for antimicrobial
peptides},
journal = {Bioinform.},
volume = {23},
number = {9},
pages = {1148--1155},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm068},
doi = {10.1093/BIOINFORMATICS/BTM068},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FjellHC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FogelYHL07,
author = {Paul Fogel and
S. Stanley Young and
Douglas M. Hawkins and
Nathalie Ledirac},
title = {Inferential, robust non-negative matrix factorization analysis of
microarray data},
journal = {Bioinform.},
volume = {23},
number = {1},
pages = {44--49},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl550},
doi = {10.1093/BIOINFORMATICS/BTL550},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/FogelYHL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Fomekong-NanfackKB07,
author = {Yves Fomekong{-}Nanfack and
Jaap A. Kaandorp and
Joke G. Blom},
title = {Efficient parameter estimation for spatio-temporal models of pattern
formation: case study of \emph{Drosophila melanogaster}},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3356--3363},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm433},
doi = {10.1093/BIOINFORMATICS/BTM433},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Fomekong-NanfackKB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FournierGMPGM07,
author = {Thomas Fournier and
Jean{-}Pierre Gabriel and
Christian Mazza and
Jerome Pasquier and
Jose L. Galbete and
Nicolas Mermod},
title = {Steady-state expression of self-regulated genes},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3185--3192},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm490},
doi = {10.1093/BIOINFORMATICS/BTM490},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/FournierGMPGM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FremezFFGQ07,
author = {Romain Fremez and
Thomas Faraut and
Gwennaele Fichant and
J{\'{e}}r{\^{o}}me Gouzy and
Yves Quentin},
title = {Phylogenetic exploration of bacterial genomic rearrangements},
journal = {Bioinform.},
volume = {23},
number = {9},
pages = {1172--1174},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm070},
doi = {10.1093/BIOINFORMATICS/BTM070},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FremezFFGQ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FreudenbergFP07,
author = {Jan Freudenberg and
Ying{-}Hui Fu and
Louis J. Pt{\'{a}}cek},
title = {Human recombination rates are increased around accelerated conserved
regions - evidence for continued selection?},
journal = {Bioinform.},
volume = {23},
number = {12},
pages = {1441--1443},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm137},
doi = {10.1093/BIOINFORMATICS/BTM137},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FreudenbergFP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FreueHSZBSMKMN07,
author = {Gabriela V. Cohen Freue and
Zsuzsanna Hollander and
Enqing Shen and
Ruben H. Zamar and
Robert Balshaw and
Andreas Scherer and
Bruce McManus and
Paul Keown and
W. Robert McMaster and
Raymond T. Ng},
title = {{MDQC:} a new quality assessment method for microarrays based on quality
control reports},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3162--3169},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm487},
doi = {10.1093/BIOINFORMATICS/BTM487},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/FreueHSZBSMKMN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FreyhultMC07,
author = {Eva Freyhult and
Vincent Moulton and
Peter Clote},
title = {Boltzmann probability of {RNA} structural neighbors and riboswitch
detection},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2054--2062},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm314},
doi = {10.1093/BIOINFORMATICS/BTM314},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FreyhultMC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FrickeyW07,
author = {Tancred Frickey and
Georg Weiller},
title = {Mclip: motif detection based on cliques of gapped local profile-to-profile
alignments},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {502--503},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl601},
doi = {10.1093/BIOINFORMATICS/BTL601},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FrickeyW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FrickeyW07a,
author = {Tancred Frickey and
Georg Weiller},
title = {Analyzing microarray data using {CLANS}},
journal = {Bioinform.},
volume = {23},
number = {9},
pages = {1170--1171},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm079},
doi = {10.1093/BIOINFORMATICS/BTM079},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FrickeyW07a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FriedbergHKSLG07,
author = {Iddo Friedberg and
Tim Harder and
Rachel Kolodny and
Einat Sitbon and
Zhanwen Li and
Adam Godzik},
title = {Using an alignment of fragment strings for comparing protein structures},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {219--224},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl310},
doi = {10.1093/BIOINFORMATICS/BTL310},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FriedbergHKSLG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FuchsMKFBF07,
author = {Angelika Fuchs and
Antonio J. Martin{-}Galiano and
Matan Kalman and
Sarel Jacob Fleishman and
Nir Ben{-}Tal and
Dmitrij Frishman},
title = {Co-evolving residues in membrane proteins},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3312--3319},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm515},
doi = {10.1093/BIOINFORMATICS/BTM515},
timestamp = {Thu, 15 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/FuchsMKFBF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FujibuchiKTHH07,
author = {Wataru Fujibuchi and
Larisa Kiseleva and
Takeaki Taniguchi and
Hajime Harada and
Paul Horton},
title = {CellMontage: similar expression profile search server},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {3103--3104},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm462},
doi = {10.1093/BIOINFORMATICS/BTM462},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FujibuchiKTHH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FujitaSGMSF07,
author = {Andr{\'{e}} Fujita and
Jo{\~{a}}o Ricardo Sato and
Humberto Miguel Garay{-}Malpartida and
Pedro Alberto Morettin and
Mari Cleide Sogayar and
Carlos Eduardo Ferreira},
title = {Time-varying modeling of gene expression regulatory networks using
the wavelet dynamic vector autoregressive method},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1623--1630},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm151},
doi = {10.1093/BIOINFORMATICS/BTM151},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/FujitaSGMSF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FukuiC07,
author = {Lisa Fukui and
Yuan Chen},
title = {NvMap: automated analysis of {NMR} chemical shift perturbation data},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {378--380},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl585},
doi = {10.1093/BIOINFORMATICS/BTL585},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FukuiC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FundelKZ07,
author = {Katrin Fundel and
Robert K{\"{u}}ffner and
Ralf Zimmer},
title = {RelEx - Relation extraction using dependency parse trees},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {365--371},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl616},
doi = {10.1093/BIOINFORMATICS/BTL616},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/FundelKZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FuscoBJL07,
author = {Diana Fusco and
Bruno Bassetti and
P. Jona and
Marco Cosentino Lagomarsino},
title = {{DIA-MCIS:} an importance sampling network randomizer for network
motif discovery and other topological observables in transcription
networks},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3388--3390},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm454},
doi = {10.1093/BIOINFORMATICS/BTM454},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FuscoBJL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FutschikCH07,
author = {Matthias E. Futschik and
Gautam Chaurasia and
Hanspeter Herzel},
title = {Comparison of human protein-protein interaction maps},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {605--611},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl683},
doi = {10.1093/BIOINFORMATICS/BTL683},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FutschikCH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FuxreiterTS07,
author = {M{\'{o}}nika Fuxreiter and
Peter Tompa and
Istv{\'{a}}n Simon},
title = {Local structural disorder imparts plasticity on linear motifs},
journal = {Bioinform.},
volume = {23},
number = {8},
pages = {950--956},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm035},
doi = {10.1093/BIOINFORMATICS/BTM035},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FuxreiterTS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GaetaMJBWC07,
author = {Bruno A. Ga{\"{e}}ta and
Harald R. Malming and
Katherine J. L. Jackson and
Michael E. Bain and
Patrick Wilson and
Andrew M. Collins},
title = {iHMMune-align: hidden Markov model-based alignment and identification
of germline genes in rearranged immunoglobulin gene sequences},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1580--1587},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm147},
doi = {10.1093/BIOINFORMATICS/BTM147},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GaetaMJBWC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GalanteTCSOK07,
author = {Pedro A. F. Galante and
Jeff Trimarchi and
Constance L. Cepko and
Sandro J. de Souza and
Lucila Ohno{-}Machado and
Winston Patrick Kuo},
title = {Automatic correspondence of tags and genes {(ACTG):} a tool for the
analysis of SAGE, {MPSS} and {SBS} data},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {903--905},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm023},
doi = {10.1093/BIOINFORMATICS/BTM023},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GalanteTCSOK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GamberoniLLMMRSTV07,
author = {Giacomo Gamberoni and
Evelina Lamma and
Gianluca Lodo and
Jlenia Marchesini and
Nicoletta Mascellani and
Simona Rossi and
Sergio Storari and
Luca Tagliavini and
Stefano Volinia},
title = {Fun{\&}Co: identification of key functional differences in transcriptomes},
journal = {Bioinform.},
volume = {23},
number = {20},
pages = {2725--2732},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm425},
doi = {10.1093/BIOINFORMATICS/BTM425},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GamberoniLLMMRSTV07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GambinW07,
author = {Anna Gambin and
Piotr Wojtalewicz},
title = {{CTX-BLAST:} context sensitive version of protein {BLAST}},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1686--1688},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm136},
doi = {10.1093/BIOINFORMATICS/BTM136},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GambinW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GanapathirajuJKK07,
author = {Madhavi Ganapathiraju and
Christopher Jon Jursa and
Hassan A. Karimi and
Judith Klein{-}Seetharaman},
title = {TMpro web server and web service: transmembrane helix prediction through
amino acid property analysis},
journal = {Bioinform.},
volume = {23},
number = {20},
pages = {2795--2796},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm398},
doi = {10.1093/BIOINFORMATICS/BTM398},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GanapathirajuJKK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GaoW07,
author = {Shouguo Gao and
Xujing Wang},
title = {{TAPPA:} topological analysis of pathway phenotype association},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {3100--3102},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm460},
doi = {10.1093/BIOINFORMATICS/BTM460},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GaoW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GaoZ07,
author = {Feng Gao and
Chun{-}Ting Zhang},
title = {DoriC: a database of \emph{oriC} regions in bacterial genomes},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1866--1867},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm255},
doi = {10.1093/BIOINFORMATICS/BTM255},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GaoZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GarciaSCFJSA07,
author = {Olivier Garcia and
Cosmin Saveanu and
Melissa S. Cline and
Micheline Fromont{-}Racine and
Alain Jacquier and
Benno Schwikowski and
Tero Aittokallio},
title = {GOlorize: a Cytoscape plug-in for network visualization with Gene
Ontology-based layout and coloring},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {394--396},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl605},
doi = {10.1093/BIOINFORMATICS/BTL605},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GarciaSCFJSA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GarzonKAC07,
author = {Jos{\'{e}} Ignacio Garz{\'{o}}n and
Julio A. Kovacs and
Ruben Abagyan and
Pablo Chac{\'{o}}n},
title = {ADP{\_}EM: fast exhaustive multi-resolution docking for high-throughput
coverage},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {427--433},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl625},
doi = {10.1093/BIOINFORMATICS/BTL625},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GarzonKAC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GarzonKAC07a,
author = {Jos{\'{e}} Ignacio Garz{\'{o}}n and
Julio A. Kovacs and
Ruben Abagyan and
Pablo Chac{\'{o}}n},
title = {DFprot: a webtool for predicting local chain deformability},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {901--902},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm014},
doi = {10.1093/BIOINFORMATICS/BTM014},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GarzonKAC07a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GaultonMV07,
author = {Kyle J. Gaulton and
Karen L. Mohlke and
Todd J. Vision},
title = {A computational system to select candidate genes for complex human
traits},
journal = {Bioinform.},
volume = {23},
number = {9},
pages = {1132--1140},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm001},
doi = {10.1093/BIOINFORMATICS/BTM001},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GaultonMV07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GauthierLZRT07,
author = {Jean{-}Pierre Gauthier and
Fabrice Legeai and
Alain Zasadzinski and
Claude Rispe and
Denis Tagu},
title = {AphidBase: a database for aphid genomic resources},
journal = {Bioinform.},
volume = {23},
number = {6},
pages = {783--784},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl682},
doi = {10.1093/BIOINFORMATICS/BTL682},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/GauthierLZRT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GavishPC07,
author = {Matan Gavish and
Amnon Peled and
Benny Chor},
title = {Genetic code symmetry and efficient design of GC-constrained coding
sequences},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {57--63},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl317},
doi = {10.1093/BIOINFORMATICS/BTL317},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GavishPC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GewehrHZ07,
author = {Jan E. Gewehr and
Volker Hintermair and
Ralf Zimmer},
title = {AutoSCOP: automated prediction of {SCOP} classifications using unique
pattern-class mappings},
journal = {Bioinform.},
volume = {23},
number = {10},
pages = {1203--1210},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm089},
doi = {10.1093/BIOINFORMATICS/BTM089},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/GewehrHZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GewehrSZ07,
author = {Jan E. Gewehr and
Martin Szugat and
Ralf Zimmer},
title = {BioWeka - extending the Weka framework for bioinformatics},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {651--653},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl671},
doi = {10.1093/BIOINFORMATICS/BTL671},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/GewehrSZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GirardotSGHF07,
author = {Charles Girardot and
Oleg Sklyar and
Sophie Grosz and
Wolfgang Huber and
Eileen E. M. Furlong},
title = {CoCo: a web application to display, store and curate ChIP-on-chip
data integrated with diverse types of gene expression data},
journal = {Bioinform.},
volume = {23},
number = {6},
pages = {771--773},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl641},
doi = {10.1093/BIOINFORMATICS/BTL641},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GirardotSGHF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GlyakinaGLG07,
author = {Anna V. Glyakina and
Sergiy O. Garbuzynskiy and
Michail Yu. Lobanov and
Oxana V. Galzitskaya},
title = {Different packing of external residues can explain differences in
the thermostability of proteins from thermophilic and mesophilic organisms},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2231--2238},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm345},
doi = {10.1093/BIOINFORMATICS/BTM345},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GlyakinaGLG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GoemanB07,
author = {Jelle J. Goeman and
Peter B{\"{u}}hlmann},
title = {Analyzing gene expression data in terms of gene sets: methodological
issues},
journal = {Bioinform.},
volume = {23},
number = {8},
pages = {980--987},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm051},
doi = {10.1093/BIOINFORMATICS/BTM051},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GoemanB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GohMMF07,
author = {Liang Goh and
Susan K. Murphy and
Sayan Mukherjee and
Terrence S. Furey},
title = {Genomic sweeping for hypermethylated genes},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {281--288},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl620},
doi = {10.1093/BIOINFORMATICS/BTL620},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GohMMF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GollB07,
author = {Alexandra Goll and
Peter Bauer},
title = {Two-stage designs applying methods differing in costs},
journal = {Bioinform.},
volume = {23},
number = {12},
pages = {1519--1526},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm140},
doi = {10.1093/BIOINFORMATICS/BTM140},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GollB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GonzalezASGMEM07,
author = {Juan R. Gonz{\'{a}}lez and
Llu{\'{\i}}s Armengol and
Xavier Sol{\'{e}} and
Elisabet Guin{\'{o}} and
Josep M. Mercader and
Xavier Estivill and
V{\'{\i}}ctor Moreno},
title = {SNPassoc: an {R} package to perform whole genome association studies},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {654--655},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm025},
doi = {10.1093/BIOINFORMATICS/BTM025},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GonzalezASGMEM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GonzalezKJNM07,
author = {Orland R. Gonzalez and
Christoph K{\"{u}}per and
Kirsten Jung and
Prospero C. Naval Jr. and
Eduardo Mendoza},
title = {Parameter estimation using Simulated Annealing for S-system models
of biochemical networks},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {480--486},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl522},
doi = {10.1093/BIOINFORMATICS/BTL522},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GonzalezKJNM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GoodeR07,
author = {Matthew Goode and
Allen G. Rodrigo},
title = {{SQUINT:} a multiple alignment program and editor},
journal = {Bioinform.},
volume = {23},
number = {12},
pages = {1553--1555},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm128},
doi = {10.1093/BIOINFORMATICS/BTM128},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GoodeR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GopalMRPSSI07,
author = {Kreshna Gopal and
Erik McKee and
Tod D. Romo and
Reetal Pai and
Jacob N. Smith and
James C. Sacchettini and
Thomas R. Ioerger},
title = {Crystallographic protein model-building on the web},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {375--377},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl584},
doi = {10.1093/BIOINFORMATICS/BTL584},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GopalMRPSSI07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GordonTS07,
author = {Paul M. K. Gordon and
Quang Trinh and
Christoph W. Sensen},
title = {Semantic Web Service provision: a realistic framework for Bioinformatics
programmers},
journal = {Bioinform.},
volume = {23},
number = {9},
pages = {1178--1180},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm060},
doi = {10.1093/BIOINFORMATICS/BTM060},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/GordonTS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GoreckiT07,
author = {Pawel G{\'{o}}recki and
Jerzy Tiuryn},
title = {Inferring phylogeny from whole genomes},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {116--122},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl296},
doi = {10.1093/BIOINFORMATICS/BTL296},
timestamp = {Fri, 17 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/GoreckiT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GoreckiT07a,
author = {Pawel G{\'{o}}recki and
Jerzy Tiuryn},
title = {URec: a system for unrooted reconciliation},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {511--512},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl634},
doi = {10.1093/BIOINFORMATICS/BTL634},
timestamp = {Fri, 17 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/GoreckiT07a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GosinkPT07,
author = {Mark M. Gosink and
Howard T. Petrie and
Nicholas F. Tsinoremas},
title = {Electronically subtracting expression patterns from a mixed cell population},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3328--3334},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm508},
doi = {10.1093/BIOINFORMATICS/BTM508},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GosinkPT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GrabeN07,
author = {Niels Grabe and
Karsten Neuber},
title = {Simulating psoriasis by altering transit amplifying cells},
journal = {Bioinform.},
volume = {23},
number = {11},
pages = {1309--1312},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm042},
doi = {10.1093/BIOINFORMATICS/BTM042},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/GrabeN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GrabePSDT07,
author = {Niels Grabe and
Thora Pommerencke and
Thorsten Steinberg and
Hartmut Dickhaus and
Pascal Tomakidi},
title = {Reconstructing protein networks of epithelial differentiation from
histological sections},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3200--3208},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm504},
doi = {10.1093/BIOINFORMATICS/BTM504},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/GrabePSDT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GrontK07,
author = {Dominik Gront and
Andrzej Kolinski},
title = {T-Pile - a package for thermodynamic calculations for biomolecules},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1840--1842},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm259},
doi = {10.1093/BIOINFORMATICS/BTM259},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/GrontK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GrootMH07,
author = {Saskia de Groot and
Thomas Mailund and
Jotun Hein},
title = {Comparative annotation of viral genomes with non-conserved gene structure},
journal = {Bioinform.},
volume = {23},
number = {9},
pages = {1080--1089},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm078},
doi = {10.1093/BIOINFORMATICS/BTM078},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GrootMH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GrossmannBRV07,
author = {Steffen Grossmann and
Sebastian Bauer and
Peter N. Robinson and
Martin Vingron},
title = {Improved detection of overrepresentation of Gene-Ontology annotations
with parent-child analysis},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {3024--3031},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm440},
doi = {10.1093/BIOINFORMATICS/BTM440},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GrossmannBRV07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GrunbergNL07,
author = {Raik Gr{\"{u}}nberg and
Michael Nilges and
Johan Leckner},
title = {Biskit - {A} software platform for structural bioinformatics},
journal = {Bioinform.},
volume = {23},
number = {6},
pages = {769--770},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl655},
doi = {10.1093/BIOINFORMATICS/BTL655},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GrunbergNL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GuAKCMWAHD07,
author = {Shengyin Gu and
Iain Anderson and
Victor Kunin and
Michael J. Cipriano and
Simon Minovitsky and
Gunther H. Weber and
Nina Amenta and
Bernd Hamann and
Inna Dubchak},
title = {TreeQ-VISTA: an interactive tree visualization tool with functional
annotation query capabilities},
journal = {Bioinform.},
volume = {23},
number = {6},
pages = {764--766},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl643},
doi = {10.1093/BIOINFORMATICS/BTL643},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/GuAKCMWAHD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GuharoyC07,
author = {Mainak Guharoy and
Pinak Chakrabarti},
title = {Secondary structure based analysis and classification of biological
interfaces: identification of binding motifs in protein-protein interactions},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {1909--1918},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm274},
doi = {10.1093/BIOINFORMATICS/BTM274},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GuharoyC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GuimeraSA07,
author = {Roger Guimer{\`{a}} and
Marta Sales{-}Pardo and
Lu{\'{\i}}s A. Nunes Amaral},
title = {A network-based method for target selection in metabolic networks},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1616--1622},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm150},
doi = {10.1093/BIOINFORMATICS/BTM150},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GuimeraSA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GultyaevHO07,
author = {Alexander P. Gultyaev and
Hans A. Heus and
Ren{\'{e}} C. L. Olsthoorn},
title = {An {RNA} conformational shift in recent {H5N1} influenza {A} viruses},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {272--276},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl559},
doi = {10.1093/BIOINFORMATICS/BTL559},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GultyaevHO07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GuoLGYMWLZZYW07,
author = {Zheng Guo and
Yongjin Li and
Xue Gong and
Chen Yao and
Wencai Ma and
Dong Wang and
Yanhui Li and
Jing Zhu and
Min Zhang and
Da Yang and
Jing Wang},
title = {Edge-based scoring and searching method for identifying condition-responsive
protein-protein interaction sub-network},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2121--2128},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm294},
doi = {10.1093/BIOINFORMATICS/BTM294},
timestamp = {Tue, 12 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/GuoLGYMWLZZYW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GuzmanVKKGEG07,
author = {David Guzman and
Dominic Veit and
Viviane Knerr and
Gerhard Kindle and
Benjamin Gathmann and
Anne{-}Marie Eades{-}Perner and
Bodo Grimbacher},
title = {The {ESID} Online Database network},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {654--655},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl675},
doi = {10.1093/BIOINFORMATICS/BTL675},
timestamp = {Mon, 22 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GuzmanVKKGEG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GyeneseiWBSS07,
author = {Attila Gyenesei and
Ulrich Wagner and
Simon Barkow{-}Oesterreicher and
Etzard Stolte and
Ralph Schlapbach},
title = {Mining co-regulated gene profiles for the detection of functional
associations in gene expression data},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {1927--1935},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm276},
doi = {10.1093/BIOINFORMATICS/BTM276},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GyeneseiWBSS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HaanWBPSB07,
author = {Jorn R. de Haan and
Ron Wehrens and
Susanne Bauerschmidt and
Ester Piek and
Ren{\'{e}} C. van Schaik and
Lutgarde M. C. Buydens},
title = {Interpretation of {ANOVA} models for microarray data using {PCA}},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {184--190},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl572},
doi = {10.1093/BIOINFORMATICS/BTL572},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HaanWBPSB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HabibJBJ07,
author = {Farhat Habib and
Andrew D. Johnson and
Ralf Bundschuh and
Daniel Janies},
title = {Large scale genotype-phenotype correlation analysis based on phylogenetic
trees},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {785--788},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm003},
doi = {10.1093/BIOINFORMATICS/BTM003},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HabibJBJ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HanKP07,
author = {Areum Han and
Woo{-}Yeon Kim and
Seong{-}Min Park},
title = {{SNP2NMD:} {A} database of human single nucleotide polymorphisms causing
nonsense-mediated mRNA decay},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {397--399},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl593},
doi = {10.1093/BIOINFORMATICS/BTL593},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HanKP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HanczarZHS07,
author = {Blaise Hanczar and
Jean{-}Daniel Zucker and
Corneliu Henegar and
Lorenza Saitta},
title = {Feature construction from synergic pairs to improve microarray-based
classification},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2866--2872},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm429},
doi = {10.1093/BIOINFORMATICS/BTM429},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HanczarZHS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HanekampBBV07,
author = {Kristian Hanekamp and
Uta Bohnebeck and
B{\'{a}}nk Beszteri and
Klaus Valentin},
title = {PhyloGena - a user-friendly system for automated phylogenetic annotation
of unknown sequences},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {793--801},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm016},
doi = {10.1093/BIOINFORMATICS/BTM016},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HanekampBBV07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Hao07,
author = {K. Hao},
title = {Genome-wide selection of tag SNPs using multiple-marker correlation},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3178--3184},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm496},
doi = {10.1093/BIOINFORMATICS/BTM496},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Hao07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HaoDC07,
author = {K. Hao and
X. Di and
S. Cawley},
title = {LdCompare: rapid computation of single- and multiple-marker \emph{r}\({}^{\mbox{2}}\)
and genetic coverage},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {252--254},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl574},
doi = {10.1093/BIOINFORMATICS/BTL574},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HaoDC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HarbronCS07,
author = {Chris Harbron and
Kai{-}Ming Chang and
Marie C. South},
title = {RefPlus: an {R} package extending the {RMA} Algorithm},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2493--2494},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm357},
doi = {10.1093/BIOINFORMATICS/BTM357},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HarbronCS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HarezlakWCL07,
author = {Jaroslaw Harezlak and
Mike Wang and
David Christiani and
Xihong Lin},
title = {Quantitative quality-assessment techniques to compare fractionation
and depletion methods in {SELDI-TOF} mass spectrometry experiments},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2441--2448},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm346},
doi = {10.1093/BIOINFORMATICS/BTM346},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HarezlakWCL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HayesNBGL07,
author = {Ben J. Hayes and
Kjetil Nilsen and
Paul R. Berg and
Eli Grindflek and
Sigbj{\o}rn Lien},
title = {{SNP} detection exploiting multiple sources of redundancy in large
{EST} collections improves validation rates},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1692--1693},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm154},
doi = {10.1093/BIOINFORMATICS/BTM154},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HayesNBGL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HearstDGKNWY07,
author = {Marti A. Hearst and
Anna Divoli and
Harendra Guturu and
Alex Ksikes and
Preslav Nakov and
Michael A. Wooldridge and
Jerry Ye},
title = {BioText Search Engine: beyond abstract search},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2196--2197},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm301},
doi = {10.1093/BIOINFORMATICS/BTM301},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HearstDGKNWY07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HegerMWH07,
author = {Andreas Heger and
Swapan Mallick and
Christopher Andrew Wilton and
Liisa Holm},
title = {The global trace graph, a novel paradigm for searching protein sequence
databases},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2361--2367},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm358},
doi = {10.1093/BIOINFORMATICS/BTM358},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HegerMWH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HellenthalS07,
author = {Garrett Hellenthal and
Matthew Stephens},
title = {msHOT: modifying Hudson's ms simulator to incorporate crossover and
gene conversion hotspots},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {520--521},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl622},
doi = {10.1093/BIOINFORMATICS/BTL622},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HellenthalS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HelvikSS07,
author = {Snorre A. Helvik and
Ola R. Sn{\o}ve Jr. and
P{\aa}l S{\ae}trom},
title = {Reliable prediction of Drosha processing sites improves microRNA gene
prediction},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {142--149},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl570},
doi = {10.1093/BIOINFORMATICS/BTL570},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HelvikSS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HenglKTM07,
author = {Stefan Hengl and
Clemens Kreutz and
Jens Timmer and
Thomas Maiwald},
title = {Data-based identifiability analysis of non-linear dynamical models},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2612--2618},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm382},
doi = {10.1093/BIOINFORMATICS/BTM382},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HenglKTM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HerissonPG07,
author = {Joan H{\'{e}}risson and
Guillaume Payen and
Rachid Gherbi},
title = {A 3D pattern matching algorithm for {DNA} sequences},
journal = {Bioinform.},
volume = {23},
number = {6},
pages = {680--686},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl669},
doi = {10.1093/BIOINFORMATICS/BTL669},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HerissonPG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HermansT07,
author = {Filip Hermans and
Elena Tsiporkova},
title = {Merging microarray cell synchronization experiments through curve
alignment},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {64--70},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl320},
doi = {10.1093/BIOINFORMATICS/BTL320},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HermansT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Hernandez-ToroPR07,
author = {Juan Hernandez{-}Toro and
Carlos Prieto and
Javier De Las Rivas},
title = {{APID2NET:} unified interactome graphic analyzer},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2495--2497},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm373},
doi = {10.1093/BIOINFORMATICS/BTM373},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Hernandez-ToroPR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HeronFR07,
author = {Elizabeth A. Heron and
B{\"{a}}rbel Finkenst{\"{a}}dt and
David A. Rand},
title = {Bayesian inference for dynamic transcriptional regulation; the Hes1
system as a case study},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2596--2603},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm367},
doi = {10.1093/BIOINFORMATICS/BTM367},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HeronFR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HertzY07,
author = {Tomer Hertz and
Chen Yanover},
title = {Identifying {HLA} supertypes by learning distance functions},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {148--155},
year = {2007},
url = {https://doi.org/10.1093/Bioinformatics/btl324},
doi = {10.1093/BIOINFORMATICS/BTL324},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HertzY07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HertzbergID07,
author = {Libi Hertzberg and
Shai Izraeli and
Eytan Domany},
title = {{STOP:} searching for transcription factor motifs using gene expression},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1737--1743},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm249},
doi = {10.1093/BIOINFORMATICS/BTM249},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HertzbergID07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HetenyiMGK07,
author = {Csaba Het{\'{e}}nyi and
Uko Maran and
Alfonso T. Garc{\'{\i}}a{-}Sosa and
Mati Karelson},
title = {Structure-based calculation of drug efficiency indices},
journal = {Bioinform.},
volume = {23},
number = {20},
pages = {2678--2685},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm431},
doi = {10.1093/BIOINFORMATICS/BTM431},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HetenyiMGK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HibbsHMHLT07,
author = {Matthew A. Hibbs and
David C. Hess and
Chad L. Myers and
Curtis Huttenhower and
Kai Li and
Olga G. Troyanskaya},
title = {Exploring the functional landscape of gene expression: directed search
of large microarray compendia},
journal = {Bioinform.},
volume = {23},
number = {20},
pages = {2692--2699},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm403},
doi = {10.1093/BIOINFORMATICS/BTM403},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HibbsHMHLT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HigdonK07,
author = {Roger Higdon and
Eugene Kolker},
title = {A predictive model for identifying proteins by a single peptide match},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {277--280},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl595},
doi = {10.1093/BIOINFORMATICS/BTL595},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HigdonK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HijikataKK07,
author = {Atsushi Hijikata and
Hiroshi Kitamura and
Yayoi Kimura and
Ryo Yokoyama and
Yuichi Aiba and
Yanyuan Bao and
Shigeharu Fujita and
Koji Hase and
Shohei Hori and
Yasuyuki Ishii and
Osami Kanagawa and
Hiroshi Kawamoto and
Kazuya Kawano and
Haruhiko Koseki and
Masato Kubo and
Ai Kurita{-}Miki and
Tomohiro Kurosaki and
Kyoko Masuda and
Mitsumasa Nakata and
Keisuke Oboki and
Hiroshi Ohno and
Mariko Okamoto and
Yoshimichi Okayama and
Jiyang O{-}Wang and
Hirohisa Saito and
Takashi Saito and
Machie Sakuma and
Katsuaki Sato and
Kaori Sato and
Ken{-}ichiro Seino and
Ruka Setoguchi and
Yuki Tamura and
Masato Tanaka and
Masaru Taniguchi and
Ichiro Taniuchi and
Annabelle Teng and
Takeshi Watanabe and
Hiroshi Watarai and
Sho Yamasaki and
Osamu Ohara},
title = {Construction of an open-access database that integrates cross-reference
information from the transcriptome and proteome of immune cells},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2934--2941},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm430},
doi = {10.1093/BIOINFORMATICS/BTM430},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HijikataKK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HildebrandtBRKL07,
author = {Andreas Hildebrandt and
Ralf Blossey and
Sergej Rjasanow and
Oliver Kohlbacher and
Hans{-}Peter Lenhof},
title = {Electrostatic potentials of proteins in water: a structured continuum
approach},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {99--103},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl312},
doi = {10.1093/BIOINFORMATICS/BTL312},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HildebrandtBRKL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HiroseSKKN07,
author = {Shuichi Hirose and
Kana Shimizu and
Satoru Kanai and
Yutaka Kuroda and
Tamotsu Noguchi},
title = {{POODLE-L:} a two-level {SVM} prediction system for reliably predicting
long disordered regions},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2046--2053},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm302},
doi = {10.1093/BIOINFORMATICS/BTM302},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HiroseSKKN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HirshS07,
author = {Eitan Hirsh and
Roded Sharan},
title = {Identification of conserved protein complexes based on a model of
protein network evolution},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {170--176},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl295},
doi = {10.1093/BIOINFORMATICS/BTL295},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HirshS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HochreiterHO07,
author = {Sepp Hochreiter and
Martin Heusel and
Klaus Obermayer},
title = {Fast model-based protein homology detection without alignment},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1728--1736},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm247},
doi = {10.1093/BIOINFORMATICS/BTM247},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HochreiterHO07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HollichS07,
author = {Volker Hollich and
Erik L. L. Sonnhammer},
title = {PfamAlyzer: domain-centric homology search},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3382--3383},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm521},
doi = {10.1093/BIOINFORMATICS/BTM521},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HollichS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HollunderFBWW07,
author = {Jens Hollunder and
Maik Friedel and
Andreas Beyer and
Christopher T. Workman and
Thomas Wilhelm},
title = {{DASS:} efficient discovery and \emph{p}-value calculation of substructures
in unordered data},
journal = {Bioinform.},
volume = {23},
number = {1},
pages = {77--83},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl511},
doi = {10.1093/BIOINFORMATICS/BTL511},
timestamp = {Tue, 01 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HollunderFBWW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Holmes07,
author = {Ian H. Holmes},
title = {Phylocomposer and phylodirector: analysis and visualization of transducer
indel models},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3263--3264},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm432},
doi = {10.1093/BIOINFORMATICS/BTM432},
timestamp = {Tue, 09 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Holmes07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HouBHH07,
author = {Minmei Hou and
Piotr Berman and
Chih{-}Hao Hsu and
Robert S. Harris},
title = {HomologMiner: looking for homologous genomic groups in whole genomes},
journal = {Bioinform.},
volume = {23},
number = {8},
pages = {917--925},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm048},
doi = {10.1093/BIOINFORMATICS/BTM048},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HouBHH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuHBCHM07,
author = {Jianhua Hu and
Xuming He and
Keith A. Baggerly and
Kevin R. Coombes and
Bryan T. J. Hennessy and
Gordon B. Mills},
title = {Non-parametric quantification of protein lysate arrays},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {1986--1994},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm283},
doi = {10.1093/BIOINFORMATICS/BTM283},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuHBCHM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuWP07,
author = {Min Hu and
Junhui Wang and
Qunsheng Peng},
title = {Identification and visualization of cage-shaped proteins},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3400--3402},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm476},
doi = {10.1093/BIOINFORMATICS/BTM476},
timestamp = {Fri, 26 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuWP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuaCBWZTJHDS07,
author = {Jianping Hua and
David W. Craig and
Marcel Brun and
Jennifer Webster and
Victoria Zismann and
Waibhav Tembe and
Keta Joshipura and
Matthew J. Huentelman and
Edward R. Dougherty and
Dietrich A. Stephan},
title = {SNiPer-HD: improved genotype calling accuracy by an expectation-maximization
algorithm for high-density {SNP} arrays},
journal = {Bioinform.},
volume = {23},
number = {1},
pages = {57--63},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl536},
doi = {10.1093/BIOINFORMATICS/BTL536},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuaCBWZTJHDS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuaL07,
author = {Dong Hua and
Yinglei Lai},
title = {An ensemble approach to microarray data-based gene prioritization
after missing value imputation},
journal = {Bioinform.},
volume = {23},
number = {6},
pages = {747--754},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm010},
doi = {10.1093/BIOINFORMATICS/BTM010},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuaL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuangC07,
author = {Di Huang and
Tommy W. S. Chow},
title = {Identifying the biologically relevant gene categories based on gene
expression and biological data: an example on prostate cancer},
journal = {Bioinform.},
volume = {23},
number = {12},
pages = {1503--1510},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm141},
doi = {10.1093/BIOINFORMATICS/BTM141},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuangC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuangGH07,
author = {Liang{-}Tsung Huang and
M. Michael Gromiha and
Shinn{-}Ying Ho},
title = {iPTREE-STAB: interpretable decision tree based method for predicting
protein stability changes upon mutations},
journal = {Bioinform.},
volume = {23},
number = {10},
pages = {1292--1293},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm100},
doi = {10.1093/BIOINFORMATICS/BTM100},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuangGH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuangGOSBP07,
author = {Jian Huang and
Arief Gusnanto and
Kathleen O'Sullivan and
Johan Staaf and
{\AA}ke Borg and
Yudi Pawitan},
title = {Robust smooth segmentation approach for array {CGH} data analysis},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2463--2469},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm359},
doi = {10.1093/BIOINFORMATICS/BTM359},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuangGOSBP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuberRPDP07,
author = {Heinrich J. Huber and
Markus Rehm and
Martin Plch{\'{u}}t and
Heiko D{\"{u}}ssmann and
Jochen H. M. Prehn},
title = {{APOPTO-CELL} - a simulation tool and interactive database for analyzing
cellular susceptibility to apoptosis},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {648--650},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl684},
doi = {10.1093/BIOINFORMATICS/BTL684},
timestamp = {Thu, 15 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuberRPDP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuffnerWZ07,
author = {Falk H{\"{u}}ffner and
Sebastian Wernicke and
Thomas Zichner},
title = {{FASPAD:} fast signaling pathway detection},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1708--1709},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm160},
doi = {10.1093/BIOINFORMATICS/BTM160},
timestamp = {Sun, 20 Nov 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuffnerWZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuskaBA07,
author = {Matthew R. Huska and
Henrik Buschmann and
Miguel A. Andrade{-}Navarro},
title = {BiasViz: visualization of amino acid biased regions in protein alignments},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {3093--3094},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm489},
doi = {10.1093/BIOINFORMATICS/BTM489},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuskaBA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HwangGK07,
author = {Seungwoo Hwang and
Zhenkun Gou and
Igor B. Kuznetsov},
title = {DP-Bind: a web server for sequence-based prediction of DNA-binding
residues in DNA-binding proteins},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {634--636},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl672},
doi = {10.1093/BIOINFORMATICS/BTL672},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HwangGK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/IlieI07,
author = {Lucian Ilie and
Silvana Ilie},
title = {Multiple spaced seeds for homology search},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {2969--2977},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm422},
doi = {10.1093/BIOINFORMATICS/BTM422},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/IlieI07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/IngrellMJB07,
author = {Christian R. Ingrell and
Martin L. Miller and
Ole N{\o}rregaard Jensen and
Nikolaj Blom},
title = {NetPhosYeast: prediction of protein phosphorylation sites in yeast},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {895--897},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm020},
doi = {10.1093/BIOINFORMATICS/BTM020},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/IngrellMJB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/IngsriswangP07,
author = {Supawadee Ingsriswang and
Eakasit Pacharawongsakda},
title = {sMOL Explorer: an open source, web-enabled database and exploration
tool for Small MOLecules datasets},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2498--2500},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm363},
doi = {10.1093/BIOINFORMATICS/BTM363},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/IngsriswangP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/IyerAA07,
author = {Lakshminarayan M. Iyer and
Vivek Anantharaman and
L. Aravind},
title = {The {DOMON} domains are involved in heme and sugar recognition},
journal = {Bioinform.},
volume = {23},
number = {20},
pages = {2660--2664},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm411},
doi = {10.1093/BIOINFORMATICS/BTM411},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/IyerAA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JacksonF07,
author = {Edmund S. Jackson and
William J. Fitzgerald},
title = {A sequential Monte Carlo {EM} approach to the transcription factor
binding site identification problem},
journal = {Bioinform.},
volume = {23},
number = {11},
pages = {1313--1320},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm054},
doi = {10.1093/BIOINFORMATICS/BTM054},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/JacksonF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JacobU07,
author = {Etai Jacob and
Ron Unger},
title = {A tale of two tails: why are terminal residues of proteins exposed?},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {225--230},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl318},
doi = {10.1093/BIOINFORMATICS/BTL318},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/JacobU07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JakobssonR07,
author = {Mattias Jakobsson and
Noah A. Rosenberg},
title = {{CLUMPP:} a cluster matching and permutation program for dealing with
label switching and multimodality in analysis of population structure},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1801--1806},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm233},
doi = {10.1093/BIOINFORMATICS/BTM233},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/JakobssonR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JakubowskaHCMD07,
author = {Joanna Jakubowska and
Ela Hunt and
Matthew Chalmers and
Martin W. McBride and
Anna F. Dominiczak},
title = {VisGenome: visualization of single and comparative genome representations},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2641--2642},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm394},
doi = {10.1093/BIOINFORMATICS/BTM394},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/JakubowskaHCMD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JaqamanDMSD07,
author = {Khuloud Jaqaman and
Jonas F. Dorn and
Eugenio Marco and
Peter K. Sorger and
Gaudenz Danuser},
title = {Phenotypic clustering of yeast mutants based on kinetochore microtubule
dynamics},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1666--1673},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm230},
doi = {10.1093/BIOINFORMATICS/BTM230},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/JaqamanDMSD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JeckRBHMMDJ07,
author = {William R. Jeck and
Josephine A. Reinhardt and
David A. Baltrus and
Matthew T. Hickenbotham and
Vincent J. Magrini and
Elaine R. Mardis and
Jeffery L. Dangl and
Corbin D. Jones},
title = {Extending assembly of short {DNA} sequences to handle error},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2942--2944},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm451},
doi = {10.1093/BIOINFORMATICS/BTM451},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/JeckRBHMMDJ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JefferyMMPCH07,
author = {Ian B. Jeffery and
Stephen F. Madden and
Paul A. McGettigan and
Guy Perri{\`{e}}re and
Aed{\'{\i}}n C. Culhane and
Desmond G. Higgins},
title = {Integrating transcription factor binding site information with gene
expression datasets},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {298--305},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl597},
doi = {10.1093/BIOINFORMATICS/BTL597},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/JefferyMMPCH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JenwitheesukS07,
author = {Ekachai Jenwitheesuk and
Ram Samudrala},
title = {Identification of potential {HIV-1} targets of minocycline},
journal = {Bioinform.},
volume = {23},
number = {20},
pages = {2797--2799},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm424},
doi = {10.1093/BIOINFORMATICS/BTM424},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/JenwitheesukS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JiangG07,
author = {Zhen Jiang and
Robert Gentleman},
title = {Extensions to gene set enrichment},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {306--313},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl599},
doi = {10.1093/BIOINFORMATICS/BTL599},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/JiangG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JiangZZ07,
author = {Bo Jiang and
Michael Q. Zhang and
Xuegong Zhang},
title = {{OSCAR:} One-class {SVM} for accurate recognition of \emph{cis}-elements},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2823--2828},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm473},
doi = {10.1093/BIOINFORMATICS/BTM473},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/JiangZZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JinNST07,
author = {Guohua Jin and
Luay Nakhleh and
Sagi Snir and
Tamir Tuller},
title = {Efficient parsimony-based methods for phylogenetic network reconstruction},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {123--128},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl313},
doi = {10.1093/BIOINFORMATICS/BTL313},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/JinNST07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JinNST07a,
author = {Guohua Jin and
Luay Nakhleh and
Sagi Snir and
Tamir Tuller},
title = {Maximum likelihood of phylogenetic networks},
journal = {Bioinform.},
volume = {23},
number = {8},
pages = {1046--1047},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm075},
doi = {10.1093/BIOINFORMATICS/BTM075},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/JinNST07a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Jones07,
author = {David T. Jones},
title = {Improving the accuracy of transmembrane protein topology prediction
using evolutionary information},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {538--544},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl677},
doi = {10.1093/BIOINFORMATICS/BTL677},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Jones07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JoungHNKZ07,
author = {Je{-}Gun Joung and
Kyu Baek Hwang and
Jin{-}Wu Nam and
Soo{-}Jin Kim and
Byoung{-}Tak Zhang},
title = {Discovery of microRNA-mRNA modules via population-based probabilistic
learning},
journal = {Bioinform.},
volume = {23},
number = {9},
pages = {1141--1147},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm045},
doi = {10.1093/BIOINFORMATICS/BTM045},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/JoungHNKZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KanazawaAON07,
author = {Mitsuhiro Kanazawa and
Hisae Anyoji and
Atsushi Ogiwara and
Umpei Nagashima},
title = {\emph{De novo} peptide sequencing using ion peak intensity and amino
acid cleavage intensity ratio},
journal = {Bioinform.},
volume = {23},
number = {9},
pages = {1068--1072},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm062},
doi = {10.1093/BIOINFORMATICS/BTM062},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KanazawaAON07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KangYKB07,
author = {Sungsoo Kang and
Sung{-}Jin Yang and
Sangsoo Kim and
Jong Bhak},
title = {{CONSORF:} a consensus prediction system for prokaryotic coding sequences},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {3088--3090},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm512},
doi = {10.1093/BIOINFORMATICS/BTM512},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KangYKB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KarpievitchHSMCBA07,
author = {Yuliya V. Karpievitch and
Elizabeth G. Hill and
Adam J. Smolka and
Jeffrey S. Morris and
Kevin R. Coombes and
Keith A. Baggerly and
Jonas S. Almeida},
title = {PrepMS: {TOF} {MS} data graphical preprocessing tool},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {264--265},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl583},
doi = {10.1093/BIOINFORMATICS/BTL583},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KarpievitchHSMCBA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KassonZPSGP07,
author = {Peter M. Kasson and
Afra Zomorodian and
Sanghyun Park and
Nina Singhal and
Leonidas J. Guibas and
Vijay S. Pande},
title = {Persistent voids: a new structural metric for membrane fusion},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1753--1759},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm250},
doi = {10.1093/BIOINFORMATICS/BTM250},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KassonZPSGP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KatohT07,
author = {Kazutaka Katoh and
Hiroyuki Toh},
title = {PartTree: an algorithm to build an approximate tree from a large number
of unaligned sequences},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {372--374},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl592},
doi = {10.1093/BIOINFORMATICS/BTL592},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KatohT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KeiblerAB07,
author = {Evan Keibler and
Manimozhiyan Arumugam and
Michael R. Brent},
title = {The Treeterbi and Parallel Treeterbi algorithms: efficient, optimal
decoding for ordinary, generalized and pair HMMs},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {545--554},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl659},
doi = {10.1093/BIOINFORMATICS/BTL659},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KeiblerAB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KellyJSSK07,
author = {Reagan J. Kelly and
Douglas M. Jacobsen and
Yan V. Sun and
Jennifer A. Smith and
Sharon L. R. Kardia},
title = {KGraph: a system for visualizing and evaluating complex genetic associations},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {249--251},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl510},
doi = {10.1093/BIOINFORMATICS/BTL510},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KellyJSSK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KempNS07,
author = {Daniel M. Kemp and
N. R. Nirmala and
Joseph D. Szustakowski},
title = {Extending the pathway analysis framework with a test for transcriptional
variance implicates novel pathway modulation during myogenic differentiation},
journal = {Bioinform.},
volume = {23},
number = {11},
pages = {1356--1362},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm116},
doi = {10.1093/BIOINFORMATICS/BTM116},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/KempNS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KerhornouG07,
author = {Arnaud Kerhornou and
Roderic Guig{\'{o}}},
title = {BioMoby web services to support clustering of co-regulated genes based
on similarity of promoter configurations},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1831--1833},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm252},
doi = {10.1093/BIOINFORMATICS/BTM252},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KerhornouG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KielS07,
author = {Christina Kiel and
Luis Serrano},
title = {Prediction of Ras-effector interactions using position energy matrices},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2226--2230},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm336},
doi = {10.1093/BIOINFORMATICS/BTM336},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/KielS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KimCCMCGKCP07,
author = {Kyu{-}Won Kim and
Hun{-}Ki Chung and
Gyu{-}Taek Cho and
Kyung{-}Ho Ma and
Dorothy Chandrabalan and
Jae{-}Gyun Gwag and
Tae{-}San Kim and
Eun{-}Gi Cho and
Yong{-}Jin Park},
title = {PowerCore: a program applying the advanced {M} strategy with a heuristic
search for establishing core sets},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2155--2162},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm313},
doi = {10.1093/BIOINFORMATICS/BTM313},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/KimCCMCGKCP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KimL07,
author = {Namshin Kim and
Christopher J. Lee},
title = {{QPRIMER:} a quick web-based application for designing conserved {PCR}
primers from multigenome alignments},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2331--2333},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm343},
doi = {10.1093/BIOINFORMATICS/BTM343},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KimL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KimLLL07,
author = {Dae{-}Won Kim and
Ki Young Lee and
Kwang H. Lee and
Doheon Lee},
title = {Towards clustering of incomplete microarray data without the use of
imputation},
journal = {Bioinform.},
volume = {23},
number = {1},
pages = {107--113},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl555},
doi = {10.1093/BIOINFORMATICS/BTL555},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KimLLL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KimP07,
author = {Hyunsoo Kim and
Haesun Park},
title = {Sparse non-negative matrix factorizations via alternating non-negativity-constrained
least squares for microarray data analysis},
journal = {Bioinform.},
volume = {23},
number = {12},
pages = {1495--1502},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm134},
doi = {10.1093/BIOINFORMATICS/BTM134},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KimP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KimS07,
author = {Jaebum Kim and
Saurabh Sinha},
title = {Indelign: a probabilistic framework for annotation of insertions and
deletions in a multiple alignment},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {289--297},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl578},
doi = {10.1093/BIOINFORMATICS/BTL578},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KimS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KimSEGS07,
author = {Namhee Kim and
Jin Sup Shin and
Shereef Elmetwaly and
Hin Hark Gan and
Tamar Schlick},
title = {{RAGPOOLS:} RNA-As-Graph-Pools - a web server for assisting the design
of structured {RNA} pools for \emph{in vitro} selection},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2959--2960},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm439},
doi = {10.1093/BIOINFORMATICS/BTM439},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KimSEGS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KimTKLV07,
author = {Sinae Kim and
Jerry W. Tsai and
Ioannis Kagiampakis and
Patricia LiWang and
Marina Vannucci},
title = {Detecting protein dissimilarities in multiple alignments using Bayesian
variable selection},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {245--246},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl566},
doi = {10.1093/BIOINFORMATICS/BTL566},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KimTKLV07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KimYKKWVKC07,
author = {Sang{-}Bae Kim and
Sungjin Yang and
Seon{-}Kyu Kim and
Sang Cheol Kim and
Hyun Goo Woo and
David J. Volsky and
Seon{-}Young Kim and
In{-}Sun Chu},
title = {GAzer: gene set analyzer},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1697--1699},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm144},
doi = {10.1093/BIOINFORMATICS/BTM144},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KimYKKWVKC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KinO07,
author = {Taishin Kin and
Yukiteru Ono},
title = {Idiographica: a general-purpose web application to build idiograms
on-demand for human, mouse and rat},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2945--2946},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm455},
doi = {10.1093/BIOINFORMATICS/BTM455},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KinO07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KirkpatrickAKH07,
author = {Bonnie Kirkpatrick and
Carlos Santos Armendariz and
Richard M. Karp and
Eran Halperin},
title = {{HAPLOPOOL:} improving haplotype frequency estimation through {DNA}
pools and phylogenetic modeling},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {3048--3055},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm435},
doi = {10.1093/BIOINFORMATICS/BTM435},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KirkpatrickAKH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KiryuKA07,
author = {Hisanori Kiryu and
Taishin Kin and
Kiyoshi Asai},
title = {Robust prediction of consensus secondary structures using averaged
base pairing probability matrices},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {434--441},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl636},
doi = {10.1093/BIOINFORMATICS/BTL636},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KiryuKA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KiryuTKA07,
author = {Hisanori Kiryu and
Yasuo Tabei and
Taishin Kin and
Kiyoshi Asai},
title = {Murlet: a practical multiple alignment tool for structural {RNA} sequences},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1588--1598},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm146},
doi = {10.1093/BIOINFORMATICS/BTM146},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KiryuTKA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KlukasS07,
author = {Christian Klukas and
Falk Schreiber},
title = {Dynamic exploration and editing of {KEGG} pathway diagrams},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {344--350},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl611},
doi = {10.1093/BIOINFORMATICS/BTL611},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KlukasS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KnorrJS07,
author = {Andrea L. Knorr and
Rishi Jain and
Ranjan Srivastava},
title = {Bayesian-based selection of metabolic objective functions},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {351--357},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl619},
doi = {10.1093/BIOINFORMATICS/BTL619},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KnorrJS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KoflerSL07,
author = {Robert Kofler and
Christian Schl{\"{o}}tterer and
Tamas Lelley},
title = {SciRoKo: a new tool for whole genome microsatellite search and investigation},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1683--1685},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm157},
doi = {10.1093/BIOINFORMATICS/BTM157},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KoflerSL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KohlbacherRGLPSS07,
author = {Oliver Kohlbacher and
Knut Reinert and
Clemens Gr{\"{o}}pl and
Eva Lange and
Nico Pfeifer and
Ole Schulz{-}Trieglaff and
Marc Sturm},
title = {{TOPP} - the OpenMS proteomics pipeline},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {191--197},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl299},
doi = {10.1093/BIOINFORMATICS/BTL299},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KohlbacherRGLPSS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KolinskiG07,
author = {Andrzej Kolinski and
Dominik Gront},
title = {Comparative modeling without implicit sequence alignments},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2522--2527},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm380},
doi = {10.1093/BIOINFORMATICS/BTM380},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/KolinskiG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KoressaarR07,
author = {Triinu Koressaar and
Maido Remm},
title = {Enhancements and modifications of primer design program Primer3},
journal = {Bioinform.},
volume = {23},
number = {10},
pages = {1289--1291},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm091},
doi = {10.1093/BIOINFORMATICS/BTM091},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KoressaarR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KowalsmanE07,
author = {Noga Kowalsman and
Miriam Eisenstein},
title = {Inherent limitations in protein-protein docking procedures},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {421--426},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl524},
doi = {10.1093/BIOINFORMATICS/BTL524},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KowalsmanE07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KreutzRMSBMT07,
author = {Clemens Kreutz and
M. M. Bartolome Rodriguez and
Thomas Maiwald and
Maxmilian Seidl and
H. E. Blum and
L. Mohr and
Jens Timmer},
title = {An error model for protein quantification},
journal = {Bioinform.},
volume = {23},
number = {20},
pages = {2747--2753},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm397},
doi = {10.1093/BIOINFORMATICS/BTM397},
timestamp = {Sat, 26 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/KreutzRMSBMT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Krissinel07,
author = {Evgeny B. Krissinel},
title = {On the relationship between sequence and structure similarities in
proteomics},
journal = {Bioinform.},
volume = {23},
number = {6},
pages = {717--723},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm006},
doi = {10.1093/BIOINFORMATICS/BTM006},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Krissinel07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KrumsiekAR07,
author = {Jan Krumsiek and
Roland Arnold and
Thomas Rattei},
title = {Gepard: a rapid and sensitive tool for creating dotplots on genome
scale},
journal = {Bioinform.},
volume = {23},
number = {8},
pages = {1026--1028},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm039},
doi = {10.1093/BIOINFORMATICS/BTM039},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KrumsiekAR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KudlickiRO07,
author = {Andrzej Kudlicki and
Maga Rowicka and
Zbyszek Otwinowski},
title = {{SCEPTRANS:} an online tool for analyzing periodic transcription in
yeast},
journal = {Bioinform.},
volume = {23},
number = {12},
pages = {1559--1561},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm126},
doi = {10.1093/BIOINFORMATICS/BTM126},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KudlickiRO07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KuenneGCH07,
author = {C. T. Kuenne and
Rohit Ghai and
Trinad Chakraborty and
Torsten Hain},
title = {GECO-linear visualization for comparative genomics},
journal = {Bioinform.},
volume = {23},
number = {1},
pages = {125--126},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl556},
doi = {10.1093/BIOINFORMATICS/BTL556},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KuenneGCH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KumarD07,
author = {Sudhir Kumar and
Joel Dudley},
title = {Bioinformatics software for biologists in the genomics era},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1713--1717},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm239},
doi = {10.1093/BIOINFORMATICS/BTM239},
timestamp = {Fri, 05 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/KumarD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LaaksoTKLAH07,
author = {Marko Laakso and
Sari Tuupanen and
Auli Karhu and
Rainer Lehtonen and
Lauri A. Aaltonen and
Sampsa Hautaniemi},
title = {Computational identification of candidate loci for recessively inherited
mutation using high-throughput {SNP} arrays},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {1952--1961},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm263},
doi = {10.1093/BIOINFORMATICS/BTM263},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LaaksoTKLAH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LaderasBMFM07,
author = {Ted Laderas and
Cory Bystrom and
Debra McMillen and
Guang Fan and
Shannon K. McWeeney},
title = {\emph{TandTRAQ}: an open-source tool for integrated protein identification
and quantitation},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3394--3396},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm467},
doi = {10.1093/BIOINFORMATICS/BTM467},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LaderasBMFM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LaiAPS07,
author = {Yinglei Lai and
Bao{-}Ling Adam and
Robert H. Podolsky and
Jin{-}Xiong She},
title = {A mixture model approach to the tests of concordance and discordance
between two large-scale experiments with two-sample groups},
journal = {Bioinform.},
volume = {23},
number = {10},
pages = {1243--1250},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm103},
doi = {10.1093/BIOINFORMATICS/BTM103},
timestamp = {Tue, 16 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LaiAPS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LallM07,
author = {Raman Lall and
Julie C. Mitchell},
title = {Metal reduction kinetics in \emph{Shewanella}},
journal = {Bioinform.},
volume = {23},
number = {20},
pages = {2754--2759},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm400},
doi = {10.1093/BIOINFORMATICS/BTM400},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LallM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LaramieWDM07,
author = {Jason M. Laramie and
Jemma B. Wilk and
Anita L. DeStefano and
Richard H. Myers},
title = {HaploBuild: an algorithm to construct non-contiguous associated haplotypes
in family based genetic studies},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2190--2192},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm316},
doi = {10.1093/BIOINFORMATICS/BTM316},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LaramieWDM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LarkinBBCMMVWWLTGH07,
author = {Mark A. Larkin and
Gordon Blackshields and
Nigel P. Brown and
R. Chenna and
Paul A. McGettigan and
Hamish McWilliam and
Franck Valentin and
Iain M. Wallace and
Andreas Wilm and
Rodrigo Lopez and
Julie Dawn Thompson and
Toby J. Gibson and
Desmond G. Higgins},
title = {Clustal {W} and Clustal {X} version 2.0},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2947--2948},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm404},
doi = {10.1093/BIOINFORMATICS/BTM404},
timestamp = {Wed, 01 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LarkinBBCMMVWWLTGH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Laskowski07,
author = {Roman A. Laskowski},
title = {Enhancing the functional annotation of {PDB} structures in PDBsum
using key figures extracted from the literature},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1824--1827},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm085},
doi = {10.1093/BIOINFORMATICS/BTM085},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Laskowski07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LauKTCC07,
author = {Winston Lau and
Tai{-}Yue Kuo and
William Tapper and
Simon J. Cox and
Andrew Collins},
title = {Exploiting large scale computing to construct high resolution linkage
disequilibrium maps of the human genome},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {517--519},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl615},
doi = {10.1093/BIOINFORMATICS/BTL615},
timestamp = {Tue, 03 Sep 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LauKTCC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LaubachH07,
author = {Thomas Laubach and
Arndt von Haeseler},
title = {TreeSnatcher: coding trees from images},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3384--3385},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm438},
doi = {10.1093/BIOINFORMATICS/BTM438},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LaubachH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LearyRNPS07,
author = {Patrick R. Leary and
David P. Remsen and
Catherine N. Norton and
David J. Patterson and
Indra Neil Sarkar},
title = {uBioRSS: Tracking taxonomic literature using {RSS}},
journal = {Bioinform.},
volume = {23},
number = {11},
pages = {1434--1436},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm109},
doi = {10.1093/BIOINFORMATICS/BTM109},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LearyRNPS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LeeCEKP07,
author = {Seung Yeoun Lee and
Yujin Chung and
Robert C. Elston and
Youngchul Kim and
Taesung Park},
title = {Log-linear model-based multifactor dimensionality reduction method
to detect gene-gene interactions},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2589--2595},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm396},
doi = {10.1093/BIOINFORMATICS/BTM396},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LeeCEKP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LemanULC07,
author = {Scotland C. Leman and
Marcy K. Uyenoyama and
Michael Lavine and
Yuguo Chen},
title = {The evolutionary forest algorithm},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {1962--1968},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm264},
doi = {10.1093/BIOINFORMATICS/BTM264},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LemanULC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LeoneSW07,
author = {Michele Leone and
Sumedha and
Martin Weigt},
title = {Clustering by soft-constraint affinity propagation: applications to
gene-expression data},
journal = {Bioinform.},
volume = {23},
number = {20},
pages = {2708--2715},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm414},
doi = {10.1093/BIOINFORMATICS/BTM414},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LeoneSW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LermanMBDCM07,
author = {Gilad Lerman and
Joseph McQuown and
Alexandre Blais and
Brian D. Dynlacht and
Guangliang Chen and
Bud Mishra},
title = {Functional genomics via multiscale analysis: application to gene expression
and ChIP-on-chip data},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {314--320},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl606},
doi = {10.1093/BIOINFORMATICS/BTL606},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LermanMBDCM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LetunicB07,
author = {Ivica Letunic and
Peer Bork},
title = {Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree
display and annotation},
journal = {Bioinform.},
volume = {23},
number = {1},
pages = {127--128},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl529},
doi = {10.1093/BIOINFORMATICS/BTL529},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LetunicB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiH07,
author = {Ai Li and
Steve Horvath},
title = {Network neighborhood analysis with the multi-node topological overlap
measure},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {222--231},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl581},
doi = {10.1093/BIOINFORMATICS/BTL581},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiJHSS07,
author = {Miao{-}Xin Li and
Lin Jiang and
S.{-}L. Ho and
You{-}Qiang Song and
Pak Chung Sham},
title = {{IGG:} {A} tool to integrate GeneChips for genetic studies},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {3105--3107},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm458},
doi = {10.1093/BIOINFORMATICS/BTM458},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiJHSS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiLB07,
author = {Leping Li and
Yu Liang and
Robert L. Bass},
title = {{GAPWM:} a genetic algorithm method for optimizing a position weight
matrix},
journal = {Bioinform.},
volume = {23},
number = {10},
pages = {1188--1194},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm080},
doi = {10.1093/BIOINFORMATICS/BTM080},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiLB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiLWL07,
author = {Minghui Li and
Lei Lin and
Xiaolong Wang and
Tao Liu},
title = {Protein-protein interaction site prediction based on conditional random
fields},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {597--604},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl660},
doi = {10.1093/BIOINFORMATICS/BTL660},
timestamp = {Thu, 18 Jul 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiLWL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiSZ07,
author = {Huai Li and
Yu Sun and
Ming Zhan},
title = {The discovery of transcriptional modules by a two-stage matrix decomposition
approach},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {473--479},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl640},
doi = {10.1093/BIOINFORMATICS/BTL640},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiSZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiZ07,
author = {Youjuan Li and
Ji Zhu},
title = {Analysis of array {CGH} data for cancer studies using fused quantile
regression},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2470--2476},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm364},
doi = {10.1093/BIOINFORMATICS/BTM364},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiZWZC07,
author = {Zhen{-}Ping Li and
Shi{-}Hua Zhang and
Yong Wang and
Xiang{-}Sun Zhang and
Luonan Chen},
title = {Alignment of molecular networks by integer quadratic programming},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1631--1639},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm156},
doi = {10.1093/BIOINFORMATICS/BTM156},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiZWZC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiangZA07,
author = {Liming Liang and
Sebastian Z{\"{o}}llner and
Gon{\c{c}}alo R. Abecasis},
title = {{GENOME:} a rapid coalescent-based whole genome simulator},
journal = {Bioinform.},
volume = {23},
number = {12},
pages = {1565--1567},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm138},
doi = {10.1093/BIOINFORMATICS/BTM138},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiangZA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiaoC07,
author = {J. G. Liao and
Khew{-}Voon Chin},
title = {Logistic regression for disease classification using microarray data:
model selection in a large \emph{p} and small \emph{n} case},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {1945--1951},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm287},
doi = {10.1093/BIOINFORMATICS/BTM287},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiaoC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LimviphuvadhTGUK07,
author = {Vachiranee Limviphuvadh and
Seigo Tanaka and
Susumu Goto and
Kunihiro Ueda and
Minoru Kanehisa},
title = {The commonality of protein interaction networks determined in neurodegenerative
disorders (NDDs)},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2129--2138},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm307},
doi = {10.1093/BIOINFORMATICS/BTM307},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LimviphuvadhTGUK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LinLHJW07,
author = {Min Lin and
Hongying Li and
Wei Hou and
Julie A. Johnson and
Rongling Wu},
title = {Modeling sequence-sequence interactions for drug response},
journal = {Bioinform.},
volume = {23},
number = {10},
pages = {1251--1257},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm110},
doi = {10.1093/BIOINFORMATICS/BTM110},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LinLHJW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LinTLCHLSH07,
author = {Chung{-}Chih Lin and
Yuh{-}Show Tsai and
Yu{-}Shi Lin and
Tai{-}Yu Chiu and
Chia{-}Cheng Hsiung and
May{-}I Lee and
Jeremy C. Simpson and
Chun{-}Nan Hsu},
title = {Boosting multiclass learning with repeating codes and weak detectors
for protein subcellular localization},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3374--3381},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm497},
doi = {10.1093/BIOINFORMATICS/BTM497},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LinTLCHLSH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LindgreenGK07,
author = {Stinus Lindgreen and
Paul P. Gardner and
Anders Krogh},
title = {{MASTR:} multiple alignment and structure prediction of non-coding
RNAs using simulated annealing},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3304--3311},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm525},
doi = {10.1093/BIOINFORMATICS/BTM525},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LindgreenGK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LipsonYA07,
author = {Doron Lipson and
Zohar Yakhini and
Yonatan Aumann},
title = {Optimization of probe coverage for high-resolution oligonucleotide
aCGH},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {77--83},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl316},
doi = {10.1093/BIOINFORMATICS/BTL316},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LipsonYA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ListgartenNRWE07,
author = {Jennifer Listgarten and
Radford M. Neal and
Sam T. Roweis and
Peter Wong and
Andrew Emili},
title = {Difference detection in {LC-MS} data for protein biomarker discovery},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {198--204},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl326},
doi = {10.1093/BIOINFORMATICS/BTL326},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ListgartenNRWE07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiuH07,
author = {Peng Liu and
J. T. Gene Hwang},
title = {Quick calculation for sample size while controlling false discovery
rate with application to microarray analysis},
journal = {Bioinform.},
volume = {23},
number = {6},
pages = {739--746},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl664},
doi = {10.1093/BIOINFORMATICS/BTL664},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiuH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiuHJ07,
author = {Jiajun Liu and
Jacqueline M. Hughes{-}Oliver and
J. Alan Menius Jr.},
title = {Domain-enhanced analysis of microarray data using {GO} annotations},
journal = {Bioinform.},
volume = {23},
number = {10},
pages = {1225--1234},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm092},
doi = {10.1093/BIOINFORMATICS/BTM092},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiuHJ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiuRK07,
author = {Jun Liu and
Sanjay Ranka and
Tamer Kahveci},
title = {Markers improve clustering of {CGH} data},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {450--457},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl624},
doi = {10.1093/BIOINFORMATICS/BTL624},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiuRK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiuW07,
author = {Xiaowen Liu and
Lusheng Wang},
title = {Computing the maximum similarity bi-clusters of gene expression data},
journal = {Bioinform.},
volume = {23},
number = {1},
pages = {50--56},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl560},
doi = {10.1093/BIOINFORMATICS/BTL560},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiuW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiuZQKFKRNMRKW07,
author = {Hongfang Liu and
Barry Zeeberg and
Gang Qu and
Akif G{\"{u}}nes Koru and
Alessandro Ferrucci and
Ari B. Kahn and
Michael C. Ryan and
Antej Nuhanovic and
Peter J. Munson and
William C. Reinhold and
David W. Kane and
John N. Weinstein},
title = {AffyProbeMiner: a web resource for computing or retrieving accurately
redefined Affymetrix probe sets},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2385--2390},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm360},
doi = {10.1093/BIOINFORMATICS/BTM360},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiuZQKFKRNMRKW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LoG07,
author = {Kenneth Lo and
Raphael Gottardo},
title = {Flexible empirical Bayes models for differential gene expression},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {328--335},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl612},
doi = {10.1093/BIOINFORMATICS/BTL612},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LoG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LoongM07,
author = {Stanley Ng Kwang Loong and
Santosh K. Mishra},
title = {De novo {SVM} classification of precursor microRNAs from genomic pseudo
hairpins using global and intrinsic folding measures},
journal = {Bioinform.},
volume = {23},
number = {11},
pages = {1321--1330},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm026},
doi = {10.1093/BIOINFORMATICS/BTM026},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LoongM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LootsO07,
author = {Gabriela G. Loots and
Ivan Ovcharenko},
title = {ECRbase: database of evolutionary conserved regions, promoters, and
transcription factor binding sites in vertebrate genomes},
journal = {Bioinform.},
volume = {23},
number = {1},
pages = {122--124},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl546},
doi = {10.1093/BIOINFORMATICS/BTL546},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LootsO07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Lopez-PerezTOD07,
author = {Jos{\'{e}} Luis L{\'{o}}pez{-}P{\'{e}}rez and
Roberto Ther{\'{o}}n and
Esther del Olmo and
David D{\'{\i}}az},
title = {{NAPROC-13:} a database for the dereplication of natural product mixtures
in bioassay-guided protocols},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3256--3257},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm516},
doi = {10.1093/BIOINFORMATICS/BTM516},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Lopez-PerezTOD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LottazTS07,
author = {Claudio Lottaz and
Joern Toedling and
Rainer Spang},
title = {Annotation-based distance measures for patient subgroup discovery
in clinical microarray studies},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2256--2264},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm322},
doi = {10.1093/BIOINFORMATICS/BTM322},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LottazTS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LunaN07,
author = {Augustin Luna and
Kristin K. Nicodemus},
title = {snp.plotter: an R-based SNP/haplotype association and linkage disequilibrium
plotting package},
journal = {Bioinform.},
volume = {23},
number = {6},
pages = {774--776},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl657},
doi = {10.1093/BIOINFORMATICS/BTL657},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LunaN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LundegaardLKBN07,
author = {Claus Lundegaard and
Ole Lund and
Can Kesmir and
S{\o}ren Brunak and
Morten Nielsen},
title = {Modeling the adaptive immune system: predictions and simulations},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3265--3275},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm471},
doi = {10.1093/BIOINFORMATICS/BTM471},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LundegaardLKBN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Lunter07,
author = {Gerton Lunter},
title = {HMMoC - a compiler for hidden Markov models},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2485--2487},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm350},
doi = {10.1093/BIOINFORMATICS/BTM350},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Lunter07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LuoYCCZS07,
author = {Feng Luo and
Yunfeng Yang and
Chin{-}Fu Chen and
Roger L. Chang and
Jizhong Zhou and
Richard H. Scheuermann},
title = {Modular organization of protein interaction networks},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {207--214},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl562},
doi = {10.1093/BIOINFORMATICS/BTL562},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LuoYCCZS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LuoYCCZS07a,
author = {Feng Luo and
Yunfeng Yang and
Chin{-}Fu Chen and
Roger L. Chang and
Jizhong Zhou and
Richard H. Scheuermann},
title = {Modular organization of protein interaction networks},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {916},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm037},
doi = {10.1093/BIOINFORMATICS/BTM037},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LuoYCCZS07a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MaH07,
author = {Shuangge Ma and
Jian Huang},
title = {Clustering threshold gradient descent regularization: with applications
to microarray studies},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {466--472},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl632},
doi = {10.1093/BIOINFORMATICS/BTL632},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MaH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MaLWS07,
author = {Xiaotu Ma and
Hyunju Lee and
Li Wang and
Fengzhu Sun},
title = {{CGI:} a new approach for prioritizing genes by combining gene expression
and protein-protein interaction data},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {215--221},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl569},
doi = {10.1093/BIOINFORMATICS/BTL569},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MaLWS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MagliettaPCLCLPPA07,
author = {Rosalia Maglietta and
Ada Piepoli and
Domenico Catalano and
Piepoli Licciulli and
Massimo Carella and
Sabino Liuni and
Graziano Pesole and
Francesco Perri and
Nicola Ancona},
title = {Statistical assessment of functional categories of genes deregulated
in pathological conditions by using microarray data},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2063--2072},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm289},
doi = {10.1093/BIOINFORMATICS/BTM289},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MagliettaPCLCLPPA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Major07,
author = {John E. Major},
title = {Genomic mutation consequence calculator},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {3091--3092},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm339},
doi = {10.1093/BIOINFORMATICS/BTM339},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Major07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MakarenkovZKGMN07,
author = {Vladimir Makarenkov and
Pablo Zentilli and
Dmytro Kevorkov and
Andrei V. Gagarin and
Nathalie Malo and
Robert Nadon},
title = {An efficient method for the detection and elimination of systematic
error in high-throughput screening},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1648--1657},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm145},
doi = {10.1093/BIOINFORMATICS/BTM145},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MakarenkovZKGMN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MarisaIRADM07,
author = {Laetitia Marisa and
Jean{-}Laurent Ichant{\'{e}} and
Nancie Reymond and
Lawrence Aggerbeck and
Herv{\'{e}} Delacroix and
Marie{-}H{\'{e}}l{\`{e}}ne Mucchielli{-}Giorgi},
title = {MAnGO: an interactive R-based tool for two-colour microarray analysis},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2339--2341},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm321},
doi = {10.1093/BIOINFORMATICS/BTM321},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MarisaIRADM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MarsicoLSMS07,
author = {Annalisa Marsico and
Dirk Labudde and
K. Tanuj Sapra and
Daniel J. Muller and
Michael Schroeder},
title = {A novel pattern recognition algorithm to classify membrane protein
unfolding pathways with high-throughput single-molecule force spectroscopy},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {231--236},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl293},
doi = {10.1093/BIOINFORMATICS/BTL293},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MarsicoLSMS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MartinZMF07,
author = {Shawn Martin and
Zhaoduo Zhang and
Anthony Martino and
Jean{-}Loup Faulon},
title = {Boolean dynamics of genetic regulatory networks inferred from microarray
time series data},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {866--874},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm021},
doi = {10.1093/BIOINFORMATICS/BTM021},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MartinZMF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MartinezSLZH07,
author = {M. Juanita Martinez and
Andrew D. Smith and
Bilan Li and
Michael Q. Zhang and
Kevin S. Harrod},
title = {Computational prediction of novel components of lung transcriptional
networks},
journal = {Bioinform.},
volume = {23},
number = {1},
pages = {21--29},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl531},
doi = {10.1093/BIOINFORMATICS/BTL531},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MartinezSLZH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MassoV07,
author = {Majid Masso and
Iosif I. Vaisman},
title = {Accurate prediction of enzyme mutant activity based on a multibody
statistical potential},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3155--3161},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm509},
doi = {10.1093/BIOINFORMATICS/BTM509},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MassoV07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MatsuiINUKWGRFO07,
author = {Shigeyuki Matsui and
Masaaki Ito and
Hiroyuki Nishiyama and
Hajime Uno and
Hirokazu Kotani and
Jun Watanabe and
Parry Guilford and
Anthony Reeve and
Masanori Fukushima and
Osamu Ogawa},
title = {Genomic characterization of multiple clinical phenotypes of cancer
using multivariate linear regression models},
journal = {Bioinform.},
volume = {23},
number = {6},
pages = {732--738},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl663},
doi = {10.1093/BIOINFORMATICS/BTL663},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MatsuiINUKWGRFO07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MayrosePERSFBRSGMP07,
author = {Itay Mayrose and
Osnat Penn and
Elana Erez and
Nimrod D. Rubinstein and
Tomer Shlomi and
Natalia Tarnovitski Freund and
Erez M. Bublil and
Eytan Ruppin and
Roded Sharan and
Jonathan M. Gershoni and
Eric Martz and
Tal Pupko},
title = {Pepitope: epitope mapping from affinity-selected peptides},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3244--3246},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm493},
doi = {10.1093/BIOINFORMATICS/BTM493},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MayrosePERSFBRSGMP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/McCauleyGMH07,
author = {Stephen McCauley and
Saskia de Groot and
Thomas Mailund and
Jotun Hein},
title = {Annotation of selection strengths in viral genomes},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {2978--2986},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm472},
doi = {10.1093/BIOINFORMATICS/BTM472},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/McCauleyGMH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/McKinneyRWCM07,
author = {Brett A. McKinney and
David M. Reif and
Bill C. White and
James E. Crowe Jr. and
Jason H. Moore},
title = {Evaporative cooling feature selection for genotypic data involving
interactions},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2113--2120},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm317},
doi = {10.1093/BIOINFORMATICS/BTM317},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/McKinneyRWCM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MedinaMTD07,
author = {Ignacio Medina and
David Montaner and
Joaqu{\'{\i}}n T{\'{a}}rraga and
Joaqu{\'{\i}}n Dopazo},
title = {Prophet, a web-based tool for class prediction using microarray data},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {390--391},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl602},
doi = {10.1093/BIOINFORMATICS/BTL602},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MedinaMTD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Meier-KolthoffAHG07,
author = {Jan P. Meier{-}Kolthoff and
Alexander F. Auch and
Daniel H. Huson and
Markus G{\"{o}}ker},
title = {{COPYCAT} : cophylogenetic analysis tool},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {898--900},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm027},
doi = {10.1093/BIOINFORMATICS/BTM027},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Meier-KolthoffAHG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MengBZ07,
author = {Hailong Meng and
Arunava Banerjee and
Lei Zhou},
title = {{BLISS} 2.0: a web-based tool for predicting conserved regulatory
modules in distantly-related orthologous sequences},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3249--3250},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm368},
doi = {10.1093/BIOINFORMATICS/BTM368},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MengBZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MilitonRMBBHMGMPP07,
author = {C{\'{e}}cile Militon and
S{\'{e}}bastien Rimour and
Mohieddine Missaoui and
Corinne Biderre and
Vincent Barra and
David R. C. Hill and
Anne Mon{\'{e}} and
Genevi{\`{e}}ve Gagne and
Harald Meier and
Eric Peyretaillade and
Pierre Peyret},
title = {PhylArray: phylogenetic probe design algorithm for microarray},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2550--2557},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm392},
doi = {10.1093/BIOINFORMATICS/BTM392},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/MilitonRMBBHMGMPP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MinguezAMD07,
author = {Pablo Minguez and
F{\'{a}}tima Al{-}Shahrour and
David Montaner and
Joaqu{\'{\i}}n Dopazo},
title = {Functional profiling of microarray experiments using text-mining derived
bioentities},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {3098--3099},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm445},
doi = {10.1093/BIOINFORMATICS/BTM445},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MinguezAMD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MisraS07,
author = {Milind Misra and
Catherine H. Schein},
title = {Flavitrack: an annotated database of flavivirus sequences},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2645--2647},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm383},
doi = {10.1093/BIOINFORMATICS/BTM383},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MisraS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Moller-LevetWM07,
author = {Carla S. M{\"{o}}ller{-}Levet and
Catharine M. West and
Crispin J. Miller},
title = {Exploiting sample variability to enhance multivariate analysis of
microarray data},
journal = {Bioinform.},
volume = {23},
number = {20},
pages = {2733--2740},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm441},
doi = {10.1093/BIOINFORMATICS/BTM441},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Moller-LevetWM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MonroeTJSAS07,
author = {Matthew E. Monroe and
Nikola Tolic and
Navdeep Jaitly and
Jason L. Shaw and
Joshua N. Adkins and
Richard D. Smith},
title = {{VIPER:} an advanced software package to support high-throughput {LC-MS}
peptide identification},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {2021--2023},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm281},
doi = {10.1093/BIOINFORMATICS/BTM281},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MonroeTJSAS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MoreiraM07,
author = {Dilvan A. Moreira and
Mark A. Musen},
title = {{OBO} to {OWL:} a prot{\'{e}}g{\'{e}} {OWL} tab to read/save
{OBO} ontologies},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1868--1870},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm258},
doi = {10.1093/BIOINFORMATICS/BTM258},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MoreiraM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MorrisHBF07,
author = {John H. Morris and
Conrad C. Huang and
Patricia C. Babbitt and
Thomas E. Ferrin},
title = {structureViz: linking Cytoscape and {UCSF} Chimera},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2345--2347},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm329},
doi = {10.1093/BIOINFORMATICS/BTM329},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MorrisHBF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MramorLDZ07,
author = {Minca Mramor and
Gregor Leban and
Janez Demsar and
Blaz Zupan},
title = {Visualization-based cancer microarray data classification analysis},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2147--2154},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm312},
doi = {10.1093/BIOINFORMATICS/BTM312},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MramorLDZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MuWUUFH07,
author = {Fangping Mu and
Robert F. Williams and
Clifford J. Unkefer and
Pat J. Unkefer and
James R. Faeder and
William S. Hlavacek},
title = {Carbon-fate maps for metabolic reactions},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3193--3199},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm498},
doi = {10.1093/BIOINFORMATICS/BTM498},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MuWUUFH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MudunuriN07,
author = {Suresh B. Mudunuri and
Hampapathalu A. Nagarajaram},
title = {IMEx: Imperfect Microsatellite Extractor},
journal = {Bioinform.},
volume = {23},
number = {10},
pages = {1181--1187},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm097},
doi = {10.1093/BIOINFORMATICS/BTM097},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/MudunuriN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MukhopadhyayC07,
author = {Nitai D. Mukhopadhyay and
Snigdhansu Chatterjee},
title = {Causality and pathway search in microarray time series experiment},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {442--449},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl598},
doi = {10.1093/BIOINFORMATICS/BTL598},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/MukhopadhyayC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MullerHK07,
author = {Andr{\'{e}} M{\"{u}}ller and
Karlheinz Holzmann and
Hans A. Kestler},
title = {Visualization of genomic aberrations using Affymetrix {SNP} arrays},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {496--497},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl608},
doi = {10.1093/BIOINFORMATICS/BTL608},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MullerHK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MyersT07,
author = {Chad L. Myers and
Olga G. Troyanskaya},
title = {Context-sensitive data integration and prediction of biological networks},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2322--2330},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm332},
doi = {10.1093/BIOINFORMATICS/BTM332},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MyersT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NacuCLH07,
author = {Serban Nacu and
Rebecca Critchley{-}Thorne and
Peter P. Lee and
Susan P. Holmes},
title = {Gene expression network analysis and applications to immunology},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {850--858},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm019},
doi = {10.1093/BIOINFORMATICS/BTM019},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NacuCLH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NagamineS07,
author = {Nobuyoshi Nagamine and
Yasubumi Sakakibara},
title = {Statistical prediction of protein-chemical interactions based on chemical
structure and mass spectrometry data},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {2004--2012},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm266},
doi = {10.1093/BIOINFORMATICS/BTM266},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NagamineS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NajmanovichAMDPVPEAT07,
author = {Rafael Najmanovich and
Abdellah Allali{-}Hassani and
Richard J. Morris and
Ludmila Dombrovsky and
Patricia W. Pan and
Masoud Vedadi and
Alexander N. Plotnikov and
Aled M. Edwards and
Cheryl H. Arrowsmith and
Janet M. Thornton},
title = {Analysis of binding site similarity, small-molecule similarity and
experimental binding profiles in the human cytosolic sulfotransferase
family},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {104--109},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl292},
doi = {10.1093/BIOINFORMATICS/BTL292},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NajmanovichAMDPVPEAT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NamYK07,
author = {Dougu Nam and
Sung Ho Yoon and
Jihyun F. Kim},
title = {Ensemble learning of genetic networks from time-series expression
data},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3225--3231},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm514},
doi = {10.1093/BIOINFORMATICS/BTM514},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NamYK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Navajas-PerezRARG07,
author = {Rafael Navajas{-}P{\'{e}}rez and
Cristina Rubio{-}Escudero and
Jos{\'{e}} Luis Aznarte and
Manuel Ruiz Rej{\'{o}}n and
Manuel A. Garrido{-}Ramos},
title = {SatDNA Analyzer: a computing tool for satellite-DNA evolutionary analysis},
journal = {Bioinform.},
volume = {23},
number = {6},
pages = {767--768},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm005},
doi = {10.1093/BIOINFORMATICS/BTM005},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Navajas-PerezRARG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NegiSOPB07,
author = {Surendra S. Negi and
Catherine H. Schein and
Numan {\"{O}}zg{\"{u}}n and
Trevor D. Power and
Werner Braun},
title = {InterProSurf: a web server for predicting interacting sites on protein
surfaces},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3397--3399},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm474},
doi = {10.1093/BIOINFORMATICS/BTM474},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NegiSOPB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NemriNBJS07,
author = {Adnane Nemri and
Michael M. Neff and
Michael Burrell and
Jonathan D. G. Jones and
David J. Studholme},
title = {Marker development for the genetic study of natural variation in \emph{Arabidopsis
thaliana}},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {3108--3109},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm501},
doi = {10.1093/BIOINFORMATICS/BTM501},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NemriNBJS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NewbergTCSML07,
author = {Lee Aaron Newberg and
William A. Thompson and
Sean Conlan and
Thomas M. Smith and
Lee Ann McCue and
Charles E. Lawrence},
title = {A phylogenetic Gibbs sampler that yields centroid solutions for \emph{cis}-regulatory
site prediction},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1718--1727},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm241},
doi = {10.1093/BIOINFORMATICS/BTM241},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NewbergTCSML07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NicolaV07,
author = {George Nicola and
Ilya A. Vakser},
title = {A simple shape characteristic of protein-protein recognition},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {789--792},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm018},
doi = {10.1093/BIOINFORMATICS/BTM018},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NicolaV07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NicolaV07a,
author = {George Nicola and
Ilya A. Vakser},
title = {A simple shape characteristic of protein-protein recognition},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2201},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm303},
doi = {10.1093/BIOINFORMATICS/BTM303},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NicolaV07a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NicolauTBJ07,
author = {Monica Nicolau and
Robert Tibshirani and
Anne{-}Lise B{\o}rresen{-}Dale and
Stefanie S. Jeffrey},
title = {Disease-specific genomic analysis: identifying the signature of pathologic
biology},
journal = {Bioinform.},
volume = {23},
number = {8},
pages = {957--965},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm033},
doi = {10.1093/BIOINFORMATICS/BTM033},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/NicolauTBJ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NikolskiS07,
author = {Macha Nikolski and
David James Sherman},
title = {Family relationships: should consensus reign? - consensus clustering
for protein families},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {71--76},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl314},
doi = {10.1093/BIOINFORMATICS/BTL314},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NikolskiS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NinioPPF07,
author = {Matan Ninio and
Eyal Privman and
Tal Pupko and
Nir Friedman},
title = {Phylogeny reconstruction: increasing the accuracy of pairwise distance
estimation using Bayesian inference of evolutionary rates},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {136--141},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl304},
doi = {10.1093/BIOINFORMATICS/BTL304},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NinioPPF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Noivirt-BrikUH07,
author = {Orly Noivirt{-}Brik and
Ron Unger and
Amnon Horovitz},
title = {Low folding propensity and high translation efficiency distinguish
\emph{in vivo} substrates of GroEL from other \emph{Escherichia coli}
proteins},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3276--3279},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm513},
doi = {10.1093/BIOINFORMATICS/BTM513},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/Noivirt-BrikUH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NotoC07,
author = {Keith Noto and
Mark Craven},
title = {Learning probabilistic models of \emph{cis}-regulatory modules that
represent logical and spatial aspects},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {156--162},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl319},
doi = {10.1093/BIOINFORMATICS/BTL319},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NotoC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NovikovB07,
author = {Eugene Novikov and
Emmanuel Barillot},
title = {Software package for automatic microarray image analysis {(MAIA)}},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {639--640},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl644},
doi = {10.1093/BIOINFORMATICS/BTL644},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NovikovB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NoyF07,
author = {Karin Noy and
Daniel P. Fasulo},
title = {Improved model-based, platform-independent feature extraction for
mass spectrometry},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2528--2535},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm385},
doi = {10.1093/BIOINFORMATICS/BTM385},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NoyF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NuedaCWHSTF07,
author = {Mar{\'{\i}}a Jos{\'{e}} Nueda and
Ana Conesa and
Johan A. Westerhuis and
Huub C. J. Hoefsloot and
Age K. Smilde and
Manuel Tal{\'{o}}n and
Alberto Ferrer},
title = {Discovering gene expression patterns in time course microarray experiments
by {ANOVA-SCA}},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1792--1800},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm251},
doi = {10.1093/BIOINFORMATICS/BTM251},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/NuedaCWHSTF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NunkesserBSIW07,
author = {Robin Nunkesser and
Thorsten Bernholt and
Holger Schwender and
Katja Ickstadt and
Ingo Wegener},
title = {Detecting high-order interactions of single nucleotide polymorphisms
using genetic programming},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3280--3288},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm522},
doi = {10.1093/BIOINFORMATICS/BTM522},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NunkesserBSIW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/OConnorW07,
author = {Timothy R. O'Connor and
John J. Wyrick},
title = {ChromatinDB: a database of genome-wide histone modification patterns
for \emph{Saccharomyces cerevisiae}},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1828--1830},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm236},
doi = {10.1093/BIOINFORMATICS/BTM236},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/OConnorW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/OfranR07,
author = {Yanay Ofran and
Burkhard Rost},
title = {{ISIS:} interaction sites identified from sequence},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {13--16},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl303},
doi = {10.1093/BIOINFORMATICS/BTL303},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/OfranR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/OhZMBRZ07,
author = {Cheolhwan Oh and
Stanislaw H. Zak and
Hamid Mirzaei and
Charles R. Buck and
Fred E. Regnier and
Xiang Zhang},
title = {Neural network prediction of peptide separation in strong anion exchange
chromatography},
journal = {Bioinform.},
volume = {23},
number = {1},
pages = {114--118},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl561},
doi = {10.1093/BIOINFORMATICS/BTL561},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/OhZMBRZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/OrenTSHSSS07,
author = {Ersin Emre Oren and
Candan Tamerler and
Deniz Sahin and
Marketa Hnilova and
Urartu Ozgur Safak Seker and
Mehmet Sarikaya and
Ram Samudrala},
title = {A novel knowledge-based approach to design inorganic-binding peptides},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2816--2822},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm436},
doi = {10.1093/BIOINFORMATICS/BTM436},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/OrenTSHSSS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/OrlowskiBB07,
author = {Jerzy Orlowski and
Michal J. Boniecki and
Janusz M. Bujnicki},
title = {I-Ssp6803I: the first homing endonuclease from the {PD-(D/E)XK} superfamily
exhibits an unusual mode of {DNA} recognition},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {527--530},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm007},
doi = {10.1093/BIOINFORMATICS/BTM007},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/OrlowskiBB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/OshlackCSG07,
author = {Alicia Oshlack and
Adrien E. Chabot and
Gordon K. Smyth and
Yoav Gilad},
title = {Using {DNA} microarrays to study gene expression in closely related
species},
journal = {Bioinform.},
volume = {23},
number = {10},
pages = {1235--1242},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm111},
doi = {10.1093/BIOINFORMATICS/BTM111},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/OshlackCSG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Panchal07,
author = {Mahesh Panchal},
title = {The automation of Nested Clade Phylogeographic Analysis},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {509--510},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl614},
doi = {10.1093/BIOINFORMATICS/BTL614},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Panchal07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PandiniBFK07,
author = {Alessandro Pandini and
Laura Bonati and
Franca Fraternali and
Jens Kleinjung},
title = {MinSet: a general approach to derive maximally representative database
subsets by using fragment dictionaries and its application to the
{SCOP} database},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {515--516},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl637},
doi = {10.1093/BIOINFORMATICS/BTL637},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PandiniBFK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PapadopoulosA07,
author = {Jason S. Papadopoulos and
Richa Agarwala},
title = {{COBALT:} constraint-based alignment tool for multiple protein sequences},
journal = {Bioinform.},
volume = {23},
number = {9},
pages = {1073--1079},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm076},
doi = {10.1093/BIOINFORMATICS/BTM076},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PapadopoulosA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Papatsenko07,
author = {Dmitri A. Papatsenko},
title = {ClusterDraw web server: a tool to identify and visualize clusters
of binding motifs for transcription factors},
journal = {Bioinform.},
volume = {23},
number = {8},
pages = {1032--1034},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm047},
doi = {10.1093/BIOINFORMATICS/BTM047},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Papatsenko07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ParkDKHLKW07,
author = {Yuhyun Park and
Sean R. Downing and
Dohyun Kim and
William C. Hahn and
Cheng Li and
Philip W. Kantoff and
L. J. Wei},
title = {Simultaneous and exact interval estimates for the contrast of two
groups based on an extremely high dimensional variable: application
to mass spec data},
journal = {Bioinform.},
volume = {23},
number = {12},
pages = {1451--1458},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm130},
doi = {10.1093/BIOINFORMATICS/BTM130},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ParkDKHLKW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ParkH07,
author = {Yungki Park and
Volkhard Helms},
title = {On the derivation of propensity scales for predicting exposed transmembrane
residues of helical membrane proteins},
journal = {Bioinform.},
volume = {23},
number = {6},
pages = {701--708},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl653},
doi = {10.1093/BIOINFORMATICS/BTL653},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ParkH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ParraBK07,
author = {Genis Parra and
Keith Bradnam and
Ian Korf},
title = {{CEGMA:} a pipeline to accurately annotate core genes in eukaryotic
genomes},
journal = {Bioinform.},
volume = {23},
number = {9},
pages = {1061--1067},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm071},
doi = {10.1093/BIOINFORMATICS/BTM071},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ParraBK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Patnaik07,
author = {Pratap R. Patnaik},
title = {Robustness analysis of the \emph{E.coli} chemosensory system to perturbations
in chemoattractant concentrations},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {875--881},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm028},
doi = {10.1093/BIOINFORMATICS/BTM028},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Patnaik07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PeccoudCS07,
author = {Jean Peccoud and
Tod Courtney and
William H. Sanders},
title = {M{\"{o}}bius: an integrated discrete-event modeling environment},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3412--3414},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm517},
doi = {10.1093/BIOINFORMATICS/BTM517},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PeccoudCS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PeiG07,
author = {Jimin Pei and
Nick V. Grishin},
title = {{PROMALS:} towards accurate multiple sequence alignments of distantly
related proteins},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {802--808},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm017},
doi = {10.1093/BIOINFORMATICS/BTM017},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PeiG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PelikanBMLH07,
author = {Richard Pelikan and
William L. Bigbee and
David Malehorn and
James Lyons{-}Weiler and
Milos Hauskrecht},
title = {Intersession reproducibility of mass spectrometry profiles and its
effect on accuracy of multivariate classification models},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {3065--3072},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm415},
doi = {10.1093/BIOINFORMATICS/BTM415},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PelikanBMLH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PengY07,
author = {Hung{-}Pin Peng and
An{-}Suei Yang},
title = {Modeling protein loops with knowledge-based prediction of sequence-structure
alignment},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2836--2842},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm456},
doi = {10.1093/BIOINFORMATICS/BTM456},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PengY07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PietalTB07,
author = {Michal J. Pietal and
Irina Tuszynska and
Janusz M. Bujnicki},
title = {{PROTMAP2D:} visualization, comparison and analysis of 2D maps of
protein structure},
journal = {Bioinform.},
volume = {23},
number = {11},
pages = {1429--1430},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm124},
doi = {10.1093/BIOINFORMATICS/BTM124},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PietalTB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PihurDD07,
author = {Vasyl Pihur and
Susmita Datta and
Somnath Datta},
title = {Weighted rank aggregation of cluster validation measures: a Monte
Carlo cross-entropy approach},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1607--1615},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm158},
doi = {10.1093/BIOINFORMATICS/BTM158},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PihurDD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PostRMDB07,
author = {Lennart J. G. Post and
Marco Roos and
M. Scott Marshall and
Roel van Driel and
Timo M. Breit},
title = {A semantic web approach applied to integrative bioinformatics experimentation:
a biological use case with genomics data},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {3080--3087},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm461},
doi = {10.1093/BIOINFORMATICS/BTM461},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PostRMDB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PoultneyGKGPCS07,
author = {Christopher S. Poultney and
Rodrigo A. Guti{\'{e}}rrez and
Manpreet S. Katari and
Miriam L. Gifford and
W. Bradford Paley and
Gloria M. Coruzzi and
Dennis E. Shasha},
title = {Sungear: interactive visualization and functional analysis of genomic
datasets},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {259--261},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl496},
doi = {10.1093/BIOINFORMATICS/BTL496},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/PoultneyGKGPCS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Przulj07,
author = {Natasa Przulj},
title = {Biological network comparison using graphlet degree distribution},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {177--183},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl301},
doi = {10.1093/BIOINFORMATICS/BTL301},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Przulj07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PugalenthiSSC07,
author = {Ganesan Pugalenthi and
Ponnuthurai N. Suganthan and
Ramanathan Sowdhamini and
Saikat Chakrabarti},
title = {SMotif: a server for structural motifs in proteins},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {637--638},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl679},
doi = {10.1093/BIOINFORMATICS/BTL679},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PugalenthiSSC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PuigboGM07,
author = {Pere Puigb{\`{o}} and
Santiago Garcia{-}Vallv{\'{e}} and
James O. McInerney},
title = {{TOPD/FMTS:} a new software to compare phylogenetic trees},
journal = {Bioinform.},
volume = {23},
number = {12},
pages = {1556--1558},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm135},
doi = {10.1093/BIOINFORMATICS/BTM135},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PuigboGM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PurcellDS07,
author = {Shaun Purcell and
Mark J. Daly and
Pak Chung Sham},
title = {{WHAP:} haplotype-based association analysis},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {255--256},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl580},
doi = {10.1093/BIOINFORMATICS/BTL580},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PurcellDS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/QianLLCL07,
author = {Ziliang Qian and
Lingyi Lu and
Xiao{-}Jun Liu and
Yu{-}Dong Cai and
Yixue Li},
title = {An approach to predict transcription factor {DNA} binding site specificity
based upon gene and transcription factor functional categorization},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2449--2454},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm348},
doi = {10.1093/BIOINFORMATICS/BTM348},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/QianLLCL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/QinZ07,
author = {Sanbo Qin and
Huan{-}Xiang Zhou},
title = {meta-PPISP: a meta web server for protein-protein interaction site
prediction},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3386--3387},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm434},
doi = {10.1093/BIOINFORMATICS/BTM434},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/QinZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/QiuHBVN07,
author = {Jian Qiu and
Martial Hue and
Asa Ben{-}Hur and
Jean{-}Philippe Vert and
William Stafford Noble},
title = {A structural alignment kernel for protein structures},
journal = {Bioinform.},
volume = {23},
number = {9},
pages = {1090--1098},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl642},
doi = {10.1093/BIOINFORMATICS/BTL642},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/QiuHBVN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/QiuWLHW07,
author = {Peng Qiu and
Z. Jane Wang and
K. J. Ray Liu and
Zhang{-}Zhi Hu and
Cathy H. Wu},
title = {Dependence network modeling for biomarker identification},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {198--206},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl553},
doi = {10.1093/BIOINFORMATICS/BTL553},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/QiuWLHW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/QuachBd07,
author = {Minh Quach and
Nicolas Brunel and
Florence d'Alch{\'{e}}{-}Buc},
title = {Estimating parameters and hidden variables in non-linear state-space
models based on ODEs for biological networks inference},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3209--3216},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm510},
doi = {10.1093/BIOINFORMATICS/BTM510},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/QuachBd07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RaghavanBTMGA07,
author = {Nandini Raghavan and
An M. I. M. De Bondt and
Willem Talloen and
Dieder Moechars and
Hinrich W. H. G{\"{o}}hlmann and
Dhammika Amaratunga},
title = {The high-level similarity of some disparate gene expression measures},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {3032--3038},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm448},
doi = {10.1093/BIOINFORMATICS/BTM448},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RaghavanBTMGA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RajanAM07,
author = {Issaac Rajan and
Sarang Aravamuthan and
Sharmila S. Mande},
title = {Identification of compositionally distinct regions in genomes using
the centroid method},
journal = {Bioinform.},
volume = {23},
number = {20},
pages = {2672--2677},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm405},
doi = {10.1093/BIOINFORMATICS/BTM405},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RajanAM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RajendrakumarBBSS07,
author = {Passoupathy Rajendrakumar and
Akshaya Kumar Biswal and
Sena M. Balachandran and
Kommoju Srinivasarao and
Raman M. Sundaram},
title = {Simple sequence repeats in organellar genomes of rice: frequency and
distribution in genic and intergenic regions},
journal = {Bioinform.},
volume = {23},
number = {1},
pages = {1--4},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl547},
doi = {10.1093/BIOINFORMATICS/BTL547},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RajendrakumarBBSS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RangwalaK07,
author = {Huzefa Rangwala and
George Karypis},
title = {Incremental window-based protein sequence alignment algorithms},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {17--23},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl297},
doi = {10.1093/BIOINFORMATICS/BTL297},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/RangwalaK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RaniBB07,
author = {T. Sobha Rani and
S. Durga Bhavani and
Raju S. Bapi},
title = {Analysis of \emph{E.coli} promoter recognition problem in dinucleotide
feature space},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {582--588},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl670},
doi = {10.1093/BIOINFORMATICS/BTL670},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RaniBB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RavehRBS07,
author = {Barak Raveh and
Ofer Rahat and
Ronen Basri and
Gideon Schreiber},
title = {Rediscovering secondary structures as network motifs - an unsupervised
learning approach},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {163--169},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl290},
doi = {10.1093/BIOINFORMATICS/BTL290},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RavehRBS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Rebholz-SchuhmannKAGRS07,
author = {Dietrich Rebholz{-}Schuhmann and
Harald Kirsch and
Miguel Arregui and
Sylvain Gaudan and
Mark Riethoven and
Peter Stoehr},
title = {EBIMed - text crunching to gather facts for proteins from Medline},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {237--244},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl302},
doi = {10.1093/BIOINFORMATICS/BTL302},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Rebholz-SchuhmannKAGRS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ReedFPCSF07,
author = {Chris Reed and
Viacheslav Fofanov and
Catherine Putonti and
Sergei Chumakov and
Tom Slezak and
Yuriy Fofanov},
title = {Effect of the mutation rate and background size on the quality of
pathogen identification},
journal = {Bioinform.},
volume = {23},
number = {20},
pages = {2665--2671},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm420},
doi = {10.1093/BIOINFORMATICS/BTM420},
timestamp = {Thu, 10 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ReedFPCSF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ReidYO07,
author = {Adam James Reid and
Corin Yeats and
Christine A. Orengo},
title = {Methods of remote homology detection can be combined to increase coverage
by 10{\%} in the midnight zone},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2353--2360},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm355},
doi = {10.1093/BIOINFORMATICS/BTM355},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ReidYO07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Reiner-BenaimYLELKB07,
author = {Anat Reiner{-}Benaim and
Daniel Yekutieli and
Noah E. Letwin and
Gregory I. Elmer and
Norman H. Lee and
Neri Kafkafi and
Yoav Benjamini},
title = {Associating quantitative behavioral traits with gene expression in
the brain: searching for diamonds in the hay},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2239--2246},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm300},
doi = {10.1093/BIOINFORMATICS/BTM300},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Reiner-BenaimYLELKB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RessomVDHALG07,
author = {Habtom W. Ressom and
Rency S. Varghese and
Steven K. Drake and
Glen L. Hortin and
Mohamed Abdel{-}Hamid and
Christopher A. Loffredo and
Radoslav Goldman},
title = {Peak selection from {MALDI-TOF} mass spectra using ant colony optimization},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {619--626},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl678},
doi = {10.1093/BIOINFORMATICS/BTL678},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RessomVDHALG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RezvoyCGM07,
author = {Cl{\'{e}}ment Rezvoy and
Delphine Charif and
Laurent Gu{\'{e}}guen and
Gabriel A. B. Marais},
title = {MareyMap: an R-based tool with graphical interface for estimating
recombination rates},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2188--2189},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm315},
doi = {10.1093/BIOINFORMATICS/BTM315},
timestamp = {Thu, 03 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RezvoyCGM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RibeiroCL07,
author = {Andre S. Ribeiro and
Daniel A. Charlebois and
Jason Lloyd{-}Price},
title = {\emph{CellLine}, a stochastic cell lineage simulator},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3409--3411},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm491},
doi = {10.1093/BIOINFORMATICS/BTM491},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RibeiroCL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RibeiroL07,
author = {Andre S. Ribeiro and
Jason Lloyd{-}Price},
title = {{SGN} Sim, a Stochastic Genetic Networks Simulator},
journal = {Bioinform.},
volume = {23},
number = {6},
pages = {777--779},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm004},
doi = {10.1093/BIOINFORMATICS/BTM004},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RibeiroL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RichterSH07,
author = {Daniel C. Richter and
Stephan C. Schuster and
Daniel H. Huson},
title = {OSLay: optimal syntenic layout of unfinished assemblies},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1573--1579},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm153},
doi = {10.1093/BIOINFORMATICS/BTM153},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RichterSH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RiepingHBBMN07,
author = {Wolfgang Rieping and
Michael Habeck and
Benjamin Bardiaux and
Aymeric Bernard and
Therese E. Malliavin and
Michael Nilges},
title = {{ARIA2:} Automated {NOE} assignment and data integration in {NMR}
structure calculation},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {381--382},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl589},
doi = {10.1093/BIOINFORMATICS/BTL589},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RiepingHBBMN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RitchieSOHDHS07,
author = {Matthew E. Ritchie and
Jeremy David Silver and
Alicia Oshlack and
Melissa Holmes and
Dileepa S. Diyagama and
Andrew J. Holloway and
Gordon K. Smyth},
title = {A comparison of background correction methods for two-colour microarrays},
journal = {Bioinform.},
volume = {23},
number = {20},
pages = {2700--2707},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm412},
doi = {10.1093/BIOINFORMATICS/BTM412},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RitchieSOHDHS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RivalsPTP07,
author = {Isabelle Rivals and
L{\'{e}}on Personnaz and
Lieng Taing and
Marie{-}Claude Potier},
title = {Enrichment or depletion of a {GO} category within a class of genes:
which test?},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {401--407},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl633},
doi = {10.1093/BIOINFORMATICS/BTL633},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RivalsPTP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RobinsonS07,
author = {Mark D. Robinson and
Gordon K. Smyth},
title = {Moderated statistical tests for assessing differences in tag abundance},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2881--2887},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm453},
doi = {10.1093/BIOINFORMATICS/BTM453},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RobinsonS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RodrigoCJ07,
author = {Guillermo Rodrigo and
Javier Carrera and
Alfonso Jaramillo},
title = {Genetdes: automatic design of transcriptional networks},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1857--1858},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm237},
doi = {10.1093/BIOINFORMATICS/BTM237},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RodrigoCJ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RodriguezBSSM07,
author = {Alexis A. Rodriguez and
Tanuja Bompada and
Mustafa H. Syed and
Parantu K. Shah and
Natalia Maltsev},
title = {Evolutionary analysis of enzymes using Chisel},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {2961--2968},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm421},
doi = {10.1093/BIOINFORMATICS/BTM421},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RodriguezBSSM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RoiderKMV07,
author = {Helge G. Roider and
Aditi Kanhere and
Thomas Manke and
Martin Vingron},
title = {Predicting transcription factor affinities to {DNA} from a biophysical
model},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {134--141},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl565},
doi = {10.1093/BIOINFORMATICS/BTL565},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/RoiderKMV07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RokhlenkoSSRP07,
author = {Oleg Rokhlenko and
Tomer Shlomi and
Roded Sharan and
Eytan Ruppin and
Ron Y. Pinter},
title = {Constraint-based functional similarity of metabolic genes: going beyond
network topology},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2139--2146},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm319},
doi = {10.1093/BIOINFORMATICS/BTM319},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RokhlenkoSSRP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RokhlenkoWY07,
author = {Oleg Rokhlenko and
Ydo Wexler and
Zohar Yakhini},
title = {Similarities and differences of gene expression in yeast stress conditions},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {184--190},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl308},
doi = {10.1093/BIOINFORMATICS/BTL308},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/RokhlenkoWY07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RoosJGFBGBW07,
author = {Franz F. Roos and
Riko Jacob and
Jonas Grossmann and
Bernd Fischer and
Joachim M. Buhmann and
Wilhelm Gruissem and
Sacha Baginsky and
Peter Widmayer},
title = {PepSplice: cache-efficient search algorithms for comprehensive identification
of tandem mass spectra},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {3016--3023},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm417},
doi = {10.1093/BIOINFORMATICS/BTM417},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RoosJGFBGBW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Rosset07,
author = {Saharon Rosset},
title = {Efficient inference on known phylogenetic trees using Poisson regression},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {142--147},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl306},
doi = {10.1093/BIOINFORMATICS/BTL306},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Rosset07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RoyceRG07,
author = {Thomas E. Royce and
Joel S. Rozowsky and
Mark Gerstein},
title = {Assessing the need for sequence-based normalization in tiling microarray
experiments},
journal = {Bioinform.},
volume = {23},
number = {8},
pages = {988--997},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm052},
doi = {10.1093/BIOINFORMATICS/BTM052},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RoyceRG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SacanOFW07,
author = {Ahmet Sacan and
Ozgur Ozturk and
Hakan Ferhatosmanoglu and
Yusu Wang},
title = {LFM-Pro: a tool for detecting significant local structural sites in
proteins},
journal = {Bioinform.},
volume = {23},
number = {6},
pages = {709--716},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl685},
doi = {10.1093/BIOINFORMATICS/BTL685},
timestamp = {Mon, 02 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SacanOFW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SaeysIL07,
author = {Yvan Saeys and
I{\~{n}}aki Inza and
Pedro Larra{\~{n}}aga},
title = {A review of feature selection techniques in bioinformatics},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2507--2517},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm344},
doi = {10.1093/BIOINFORMATICS/BTM344},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SaeysIL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SaeysRP07,
author = {Yvan Saeys and
Pierre Rouz{\'{e}} and
Yves Van de Peer},
title = {In search of the small ones: improved prediction of short exons in
vertebrates, plants, fungi and protists},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {414--420},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl639},
doi = {10.1093/BIOINFORMATICS/BTL639},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SaeysRP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SaigoUT07,
author = {Hiroto Saigo and
Takeaki Uno and
Koji Tsuda},
title = {Mining complex genotypic features for predicting {HIV-1} drug resistance},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2455--2462},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm353},
doi = {10.1093/BIOINFORMATICS/BTM353},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SaigoUT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SalwinskiE07,
author = {Lukasz Salw{\'{\i}}nski and
David S. Eisenberg},
title = {The MiSink Plugin: Cytoscape as a graphical interface to the Database
of Interacting Proteins},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2193--2195},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm304},
doi = {10.1093/BIOINFORMATICS/BTM304},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SalwinskiE07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SangesCC07,
author = {Remo Sanges and
Francesca Cordero and
Raffaele A. Calogero},
title = {oneChannelGUI: a graphical interface to Bioconductor tools, designed
for life scientists who are not familiar with {R} language},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3406--3408},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm469},
doi = {10.1093/BIOINFORMATICS/BTM469},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SangesCC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SaulF07,
author = {Zachary M. Saul and
Vladimir Filkov},
title = {Exploring biological network structure using exponential random graph
models},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2604--2611},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm370},
doi = {10.1093/BIOINFORMATICS/BTM370},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SaulF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SchafferRCA07,
author = {Alejandro A. Sch{\"{a}}ffer and
Edward Stallknecht Rice and
William J. Cook and
Richa Agarwala},
title = {rh{\_}tsp{\_}map 3.0: end-to-end radiation hybrid mapping with improved
speed and quality control},
journal = {Bioinform.},
volume = {23},
number = {9},
pages = {1156--1158},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm077},
doi = {10.1093/BIOINFORMATICS/BTM077},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SchafferRCA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ScharpfTPR07,
author = {Robert B. Scharpf and
Jason C. Ting and
Jonathan Pevsner and
Ingo Ruczinski},
title = {\emph{SNPchip}: {R} classes and methods for {SNP} array data},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {627--628},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl638},
doi = {10.1093/BIOINFORMATICS/BTL638},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ScharpfTPR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SchlessingerPR07,
author = {Avner Schlessinger and
Marco Punta and
Burkhard Rost},
title = {Natively unstructured regions in proteins identified from contact
predictions},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2376--2384},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm349},
doi = {10.1093/BIOINFORMATICS/BTM349},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SchlessingerPR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SchlickerHRLA07,
author = {Andreas Schlicker and
Carola Huthmacher and
Fidel Ram{\'{\i}}rez and
Thomas Lengauer and
Mario Albrecht},
title = {Functional evaluation of domain-domain interactions and human protein
interaction networks},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {859--865},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm012},
doi = {10.1093/BIOINFORMATICS/BTM012},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SchlickerHRLA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Schmidt07,
author = {Henning Schmidt},
title = {SBaddon: high performance simulation for the Systems Biology Toolbox
for {MATLAB}},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {646--647},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl668},
doi = {10.1093/BIOINFORMATICS/BTL668},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Schmidt07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SchmidtDVW07,
author = {Henning Schmidt and
Gunnar Drews and
Julio Vera and
Olaf Wolkenhauer},
title = {{SBML} export interface for the systems biology toolbox for {MATLAB}},
journal = {Bioinform.},
volume = {23},
number = {10},
pages = {1297--1298},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm105},
doi = {10.1093/BIOINFORMATICS/BTM105},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SchmidtDVW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SchmidtHB07,
author = {Heiko A. Schmidt and
Arndt von Haeseler and
Jutta Buschbom},
title = {pIPHULA - parallel inference of population parameters using a likelihood
approach},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2636--2637},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm391},
doi = {10.1093/BIOINFORMATICS/BTM391},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SchmidtHB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SchneiderDG07,
author = {Adrian Schneider and
Christophe Dessimoz and
Gaston H. Gonnet},
title = {{OMA} Browser - Exploring orthologous relations across 352 complete
genomes},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2180--2182},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm295},
doi = {10.1093/BIOINFORMATICS/BTM295},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SchneiderDG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SchreiberB07,
author = {Andreas W. Schreiber and
Ute Baumann},
title = {A framework for gene expression analysis},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {191--197},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl591},
doi = {10.1093/BIOINFORMATICS/BTL591},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SchreiberB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SchultzeE07,
author = {Joachim L. Schultze and
Daniela Eggle},
title = {IlluminaGUI: Graphical User Interface for analyzing gene expression
data generated on the Illumina platform},
journal = {Bioinform.},
volume = {23},
number = {11},
pages = {1431--1433},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm101},
doi = {10.1093/BIOINFORMATICS/BTM101},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SchultzeE07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SchulzeHOR07,
author = {Uta Schulze and
Bettina Hepp and
Cheng Soon Ong and
Gunnar R{\"{a}}tsch},
title = {{PALMA:} mRNA to genome alignments using large margin algorithms},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {1892--1900},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm275},
doi = {10.1093/BIOINFORMATICS/BTM275},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SchulzeHOR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SchumacherBG07,
author = {Martin Schumacher and
Harald Binder and
Thomas Gerds},
title = {Assessment of survival prediction models based on microarray data},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1768--1774},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm232},
doi = {10.1093/BIOINFORMATICS/BTM232},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SchumacherBG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SchwartzP07,
author = {Ariel S. Schwartz and
Lior Pachter},
title = {Multiple alignment by sequence annealing},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {24--29},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl311},
doi = {10.1093/BIOINFORMATICS/BTL311},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SchwartzP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SedwardsM07,
author = {Sean Sedwards and
Tommaso Mazza},
title = {Cyto-Sim: a formal language model and stochastic simulator of membrane-enclosed
biochemical processes},
journal = {Bioinform.},
volume = {23},
number = {20},
pages = {2800--2802},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm416},
doi = {10.1093/BIOINFORMATICS/BTM416},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SedwardsM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SeeberCRSC07,
author = {Michele Seeber and
Marco Cecchini and
Francesco Rao and
Giovanni Settanni and
Amedeo Caflisch},
title = {Wordom: a program for efficient analysis of molecular dynamics simulations},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2625--2627},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm378},
doi = {10.1093/BIOINFORMATICS/BTM378},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SeeberCRSC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SeelowHL07,
author = {Dominik Seelow and
Katrin Hoffmann and
Tom H. Lindner},
title = {AssociationDB: web-based exploration of genomic association},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2643--2644},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm376},
doi = {10.1093/BIOINFORMATICS/BTM376},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SeelowHL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShahSKSWW07,
author = {Anuj R. Shah and
Mudita Singhal and
Kyle R. Klicker and
Eric G. Stephan and
H. Steven Wiley and
Katrina M. Waters},
title = {Enabling high-throughput data management for systems biology: The
Bioinformatics Resource Manager},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {906--909},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm031},
doi = {10.1093/BIOINFORMATICS/BTM031},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ShahSKSWW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShamAKKCFN07,
author = {Pak Chung Sham and
Sio Iong Ao and
Johnny S. H. Kwan and
P. Kao and
F. Cheung and
Pui{-}Yee Fong and
Michael K. Ng},
title = {Combining functional and linkage disequilibrium information in the
selection of tag SNPs},
journal = {Bioinform.},
volume = {23},
number = {1},
pages = {129--131},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl532},
doi = {10.1093/BIOINFORMATICS/BTL532},
timestamp = {Wed, 03 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ShamAKKCFN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShamimAN07,
author = {Mohammad Tabrez Anwar Shamim and
Mohammad Anwaruddin and
Hampapathalu A. Nagarajaram},
title = {Support Vector Machine-based classification of protein folds using
the structural properties of amino acid residues and amino acid residue
pairs},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3320--3327},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm527},
doi = {10.1093/BIOINFORMATICS/BTM527},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ShamimAN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShapovalovCD07,
author = {Maxim V. Shapovalov and
Adrian A. Canutescu and
Roland L. Dunbrack Jr.},
title = {BioDownloader: bioinformatics downloads and updates in a few clicks},
journal = {Bioinform.},
volume = {23},
number = {11},
pages = {1437--1439},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm120},
doi = {10.1093/BIOINFORMATICS/BTM120},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ShapovalovCD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShatkayHBBDK07,
author = {Hagit Shatkay and
Annette H{\"{o}}glund and
Scott Brady and
Torsten Blum and
Pierre D{\"{o}}nnes and
Oliver Kohlbacher},
title = {SherLoc: high-accuracy prediction of protein subcellular localization
by integrating text and protein sequence data},
journal = {Bioinform.},
volume = {23},
number = {11},
pages = {1410--1417},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm115},
doi = {10.1093/BIOINFORMATICS/BTM115},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ShatkayHBBDK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShiMB07,
author = {Yanxin Shi and
Tom M. Mitchell and
Ziv Bar{-}Joseph},
title = {Inferring pairwise regulatory relationships from multiple time series
datasets},
journal = {Bioinform.},
volume = {23},
number = {6},
pages = {755--763},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl676},
doi = {10.1093/BIOINFORMATICS/BTL676},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ShiMB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShiZMKG07,
author = {Shuoyong Shi and
Yi Zhong and
Indraneel Majumdar and
S. Sri Krishna and
Nick V. Grishin},
title = {Searching for three-dimensional secondary structural patterns in proteins
with ProSMoS},
journal = {Bioinform.},
volume = {23},
number = {11},
pages = {1331--1338},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm121},
doi = {10.1093/BIOINFORMATICS/BTM121},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ShiZMKG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShimizuHN07,
author = {Kana Shimizu and
Shuichi Hirose and
Tamotsu Noguchi},
title = {{POODLE-S:} web application for predicting protein disorder by using
physicochemical features and reduced amino acid set of a position-specific
scoring matrix},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2337--2338},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm330},
doi = {10.1093/BIOINFORMATICS/BTM330},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ShimizuHN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShinLL07,
author = {Hyunjung Shin and
Andreas Martin Lisewski and
Olivier Lichtarge},
title = {Graph sharpening plus graph integration: a synergy that improves protein
functional classification},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3217--3224},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm511},
doi = {10.1093/BIOINFORMATICS/BTM511},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ShinLL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShiryevPSA07,
author = {Sergey A. Shiryev and
Jason S. Papadopoulos and
Alejandro A. Sch{\"{a}}ffer and
Richa Agarwala},
title = {Improved {BLAST} searches using longer words for protein seeding},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2949--2951},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm479},
doi = {10.1093/BIOINFORMATICS/BTM479},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ShiryevPSA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SkoldRSBEOB07,
author = {Martin Sk{\"{o}}ld and
Tobias Ryd{\'{e}}n and
Viktoria Samuelsson and
Charlotte Bratt and
Lars Ekblad and
H{\aa}kan Olsson and
Bo Baldetorp},
title = {Regression analysis and modelling of data acquisition for {SELDI-TOF}
mass spectrometry},
journal = {Bioinform.},
volume = {23},
number = {11},
pages = {1401--1409},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm104},
doi = {10.1093/BIOINFORMATICS/BTM104},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SkoldRSBEOB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SlabinskiJRWLG07,
author = {Lukasz Slabinski and
Lukasz Jaroszewski and
Leszek Rychlewski and
Ian A. Wilson and
Scott A. Lesley and
Adam Godzik},
title = {XtalPred: a web server for prediction of protein crystallizability},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3403--3405},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm477},
doi = {10.1093/BIOINFORMATICS/BTM477},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SlabinskiJRWLG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SmialowskiMMGHF07,
author = {Pawel Smialowski and
Antonio J. Martin{-}Galiano and
Aleksandra Mikolajka and
Tobias Girschick and
Tad A. Holak and
Dmitrij Frishman},
title = {Protein solubility: sequence based prediction and experimental verification},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2536--2542},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl623},
doi = {10.1093/BIOINFORMATICS/BTL623},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SmialowskiMMGHF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SmithCKSG07,
author = {Andrew K. Smith and
Kei{-}Hoi Cheung and
Michael Krauthammer and
Martin H. Schultz and
Mark Gerstein},
title = {Leveraging the structure of the Semantic Web to enhance information
retrieval for proteomics},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {3073--3079},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm452},
doi = {10.1093/BIOINFORMATICS/BTM452},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SmithCKSG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SmithLBMB07,
author = {Richard E. Smith and
Simon C. Lovell and
David F. Burke and
Rinaldo W. Montalv{\~{a}}o and
Tom L. Blundell},
title = {Andante: reducing side-chain rotamer search space during comparative
modeling using environment-specific substitution probabilities},
journal = {Bioinform.},
volume = {23},
number = {9},
pages = {1099--1105},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm073},
doi = {10.1093/BIOINFORMATICS/BTM073},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SmithLBMB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SokolBT07,
author = {Dina Sokol and
Gary Benson and
Justin Tojeira},
title = {Tandem repeats over the edit distance},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {30--35},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl309},
doi = {10.1093/BIOINFORMATICS/BTL309},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SokolBT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SommerMDSWL07,
author = {Ingolf Sommer and
Oliver M{\"{u}}ller and
Francisco S. Domingues and
Oliver Sander and
Joachim Weickert and
Thomas Lengauer},
title = {Moment invariants as shape recognition technique for comparing protein
binding sites},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3139--3146},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm503},
doi = {10.1093/BIOINFORMATICS/BTM503},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SommerMDSWL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SongKGWT07,
author = {Young C. Song and
Edward A. Kawas and
Benjamin M. Good and
Mark D. Wilkinson and
Scott J. Tebbutt},
title = {DataBiNS: a BioMoby-based data-mining workflow for biological pathways
and non-synonymous SNPs},
journal = {Bioinform.},
volume = {23},
number = {6},
pages = {780--782},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl648},
doi = {10.1093/BIOINFORMATICS/BTL648},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SongKGWT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SongMLFQL07,
author = {Jun S. Song and
Kaveh Maghsoudi and
Wei Li and
Edward Fox and
John Quackenbush and
Xiaole Shirley Liu},
title = {Microarray blob-defect removal improves array analysis},
journal = {Bioinform.},
volume = {23},
number = {8},
pages = {966--971},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm043},
doi = {10.1093/BIOINFORMATICS/BTM043},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SongMLFQL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SongYTHB07,
author = {Jiangning Song and
Zheng Yuan and
Hao Tan and
Thomas Huber and
Kevin Burrage},
title = {Predicting disulfide connectivity from protein sequence using multiple
sequence feature vectors and secondary structure},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3147--3154},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm505},
doi = {10.1093/BIOINFORMATICS/BTM505},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SongYTHB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SoranzoBA07,
author = {Nicola Soranzo and
Ginestra Bianconi and
Claudio Altafini},
title = {Comparing association network algorithms for reverse engineering of
large-scale gene regulatory networks: synthetic versus real data},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1640--1647},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm163},
doi = {10.1093/BIOINFORMATICS/BTM163},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SoranzoBA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SorensenAW07,
author = {Frank J. S{\o}rensen and
Claus L. Andersen and
Carsten Wiuf},
title = {SNPTools: a software tool for visualization and analysis of microarray
data},
journal = {Bioinform.},
volume = {23},
number = {12},
pages = {1550--1552},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm122},
doi = {10.1093/BIOINFORMATICS/BTM122},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SorensenAW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Soria-CarrascoTIC07,
author = {V{\'{\i}}ctor Soria{-}Carrasco and
Gerard Talavera and
Javier Igea and
Jose Castresana},
title = {The {K} tree score: quantification of differences in the relative
branch length and topology of phylogenetic trees},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2954--2956},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm466},
doi = {10.1093/BIOINFORMATICS/BTM466},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Soria-CarrascoTIC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SpirinTKA07,
author = {Sergei A. Spirin and
Mikhail Titov and
Anna S. Karyagina and
Andrei Alexeevski},
title = {{NPIDB:} a Database of Nucleic Acids-Protein Interactions},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3247--3248},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm519},
doi = {10.1093/BIOINFORMATICS/BTM519},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SpirinTKA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/StackliesRSWS07,
author = {Wolfram Stacklies and
Henning Redestig and
Matthias Scholz and
Dirk Walther and
Joachim Selbig},
title = {pcaMethods - a bioconductor package providing {PCA} methods for incomplete
data},
journal = {Bioinform.},
volume = {23},
number = {9},
pages = {1164--1167},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm069},
doi = {10.1093/BIOINFORMATICS/BTM069},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/StackliesRSWS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/StegglesBSW07,
author = {L. Jason Steggles and
Richard Banks and
Oliver Shaw and
Anil Wipat},
title = {Qualitatively modelling and analysing genetic regulatory networks:
a Petri net approach},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {336--343},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl596},
doi = {10.1093/BIOINFORMATICS/BTL596},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/StegglesBSW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SteuerNFGBS07,
author = {Ralf Steuer and
Adriano Nunes Nesi and
Alisdair R. Fernie and
Thilo Gross and
Bernd Blasius and
Joachim Selbig},
title = {From structure to dynamics of metabolic pathways: application to the
plant mitochondrial {TCA} cycle},
journal = {Bioinform.},
volume = {23},
number = {11},
pages = {1378--1385},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm065},
doi = {10.1093/BIOINFORMATICS/BTM065},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SteuerNFGBS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/StjernqvistRSS07,
author = {Susann Stjernqvist and
Tobias Ryd{\'{e}}n and
Martin Sk{\"{o}}ld and
Johan Staaf},
title = {Continuous-index hidden Markov modelling of array {CGH} copy number
data},
journal = {Bioinform.},
volume = {23},
number = {8},
pages = {1006--1014},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm059},
doi = {10.1093/BIOINFORMATICS/BTM059},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/StjernqvistRSS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SubramanianKGTM07,
author = {Aravind Subramanian and
Heidi Kuehn and
Joshua Gould and
Pablo Tamayo and
Jill P. Mesirov},
title = {\emph{GSEA-P}: a desktop application for Gene Set Enrichment Analysis},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3251--3253},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm369},
doi = {10.1093/BIOINFORMATICS/BTM369},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SubramanianKGTM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SudermanH07,
author = {Matthew Suderman and
Michael T. Hallett},
title = {Tools for visually exploring biological networks},
journal = {Bioinform.},
volume = {23},
number = {20},
pages = {2651--2659},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm401},
doi = {10.1093/BIOINFORMATICS/BTM401},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SudermanH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SuhrerWS07,
author = {Stefan J. Suhrer and
Markus Wiederstein and
Manfred J. Sippl},
title = {{QSCOP} - {SCOP} quantified by structural relationships},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {513--514},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl594},
doi = {10.1093/BIOINFORMATICS/BTL594},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SuhrerWS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SunB07,
author = {Yanni Sun and
Jeremy Buhler},
title = {Designing patterns for profile {HMM} search},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {42--43},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl323},
doi = {10.1093/BIOINFORMATICS/BTL323},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SunB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SunGLLF07,
author = {Yijun Sun and
Steve Goodison and
Jian Li and
Li Liu and
William G. Farmerie},
title = {Improved breast cancer prognosis through the combination of clinical
and genetic markers},
journal = {Bioinform.},
volume = {23},
number = {1},
pages = {30--37},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl543},
doi = {10.1093/BIOINFORMATICS/BTL543},
timestamp = {Thu, 07 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SunGLLF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SunYL07,
author = {Wei Sun and
Tianwei Yu and
Ker{-}Chau Li},
title = {Detection of eQTL modules mediated by activity levels of transcription
factors},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2290--2297},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm327},
doi = {10.1093/BIOINFORMATICS/BTM327},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SunYL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SunZYGL07,
author = {Ying Sun and
Shuqi Zhao and
Huashan Yu and
Ge Gao and
Jingchu Luo},
title = {ABCGrid: Application for Bioinformatics Computing Grid},
journal = {Bioinform.},
volume = {23},
number = {9},
pages = {1175--1177},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm086},
doi = {10.1093/BIOINFORMATICS/BTM086},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SunZYGL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SuzekHMMW07,
author = {Baris E. Suzek and
Hongzhan Huang and
Peter B. McGarvey and
Raja Mazumder and
Cathy H. Wu},
title = {UniRef: comprehensive and non-redundant UniProt reference clusters},
journal = {Bioinform.},
volume = {23},
number = {10},
pages = {1282--1288},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm098},
doi = {10.1093/BIOINFORMATICS/BTM098},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SuzekHMMW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SweredoskiDNSB07,
author = {Michael J. Sweredoski and
Kevin J. Donovan and
Bao D. Nguyen and
A. J. Shaka and
Pierre Baldi},
title = {Minimizing the overlap problem in protein {NMR:} a computational framework
for precision amino acid labeling},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2829--2835},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm406},
doi = {10.1093/BIOINFORMATICS/BTM406},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SweredoskiDNSB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SykacekCPFM07,
author = {Peter Sykacek and
R. Clarkson and
Cristin G. Print and
R. A. Furlong and
Gos Micklem},
title = {Bayesian modelling of shared gene function},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {1936--1944},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm280},
doi = {10.1093/BIOINFORMATICS/BTM280},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SykacekCPFM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TaiP07,
author = {Feng Tai and
Wei Pan},
title = {Incorporating prior knowledge of predictors into penalized classifiers
with multiple penalty terms},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1775--1782},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm234},
doi = {10.1093/BIOINFORMATICS/BTM234},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/TaiP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TaiP07a,
author = {Feng Tai and
Wei Pan},
title = {Incorporating prior knowledge of gene functional groups into regularized
discriminant analysis of microarray data},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3170--3177},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm488},
doi = {10.1093/BIOINFORMATICS/BTM488},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TaiP07a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TakitohFMTYOYNK07,
author = {Shuichi Takitoh and
Shogo Fujii and
Yoichi Mase and
Junichi Takasaki and
Toshimasa Yamazaki and
Yozo Ohnishi and
Masao Yanagisawa and
Yusuke Nakamura and
Naoyuki Kamatani},
title = {Accurate automated clustering of two-dimensional data for single-nucleotide
polymorphism genotyping by a combination of clustering methods: evaluation
by large-scale real data},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {408--413},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl133},
doi = {10.1093/BIOINFORMATICS/BTL133},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TakitohFMTYOYNK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TalloenCHABKG07,
author = {Willem Talloen and
Djork{-}Arn{\'{e}} Clevert and
Sepp Hochreiter and
Dhammika Amaratunga and
Luc Bijnens and
Stefan Kass and
Hinrich W. H. G{\"{o}}hlmann},
title = {I/NI-calls for the exclusion of non-informative genes: a highly effective
filtering tool for microarray data},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2897--2902},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm478},
doi = {10.1093/BIOINFORMATICS/BTM478},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TalloenCHABKG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TangFGAMAD07,
author = {Thomas Tang and
Nicolas Fran{\c{c}}ois and
Annie Glatigny and
Nicolas Agier and
Marie{-}H{\'{e}}l{\`{e}}ne Mucchielli{-}Giorgi and
Lawrence Aggerbeck and
Herv{\'{e}} Delacroix},
title = {Expression ratio evaluation in two-colour microarray experiments is
significantly improved by correcting image misalignment},
journal = {Bioinform.},
volume = {23},
number = {20},
pages = {2686--2691},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm399},
doi = {10.1093/BIOINFORMATICS/BTM399},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TangFGAMAD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TaylorVKFM07,
author = {Martin S. Taylor and
William Valdar and
Ashish Kumar and
Jonathan Flint and
Richard Mott},
title = {Management, presentation and interpretation of genome scans using
{GSCANDB}},
journal = {Bioinform.},
volume = {23},
number = {12},
pages = {1545--1549},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm123},
doi = {10.1093/BIOINFORMATICS/BTM123},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/TaylorVKFM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TembeZBCGWBR07,
author = {Waibhav Tembe and
Nela Zavaljevski and
Elizabeth A. Bode and
Catherine Chase and
Jeanne Geyer and
Leonard P. Wasieloski and
Gary Benson and
Jaques Reifman},
title = {Oligonucleotide fingerprint identification for microarray-based pathogen
diagnostic assays},
journal = {Bioinform.},
volume = {23},
number = {1},
pages = {5--13},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl549},
doi = {10.1093/BIOINFORMATICS/BTL549},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TembeZBCGWBR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TeoISGDKC07,
author = {Yik Y. Teo and
Michael Inouye and
Kerrin S. Small and
Rhian Gwilliam and
Panagiotis Deloukas and
Dominic Kwiatkowski and
Taane G. Clark},
title = {A genotype calling algorithm for the Illumina BeadArray platform},
journal = {Bioinform.},
volume = {23},
number = {20},
pages = {2741--2746},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm443},
doi = {10.1093/BIOINFORMATICS/BTM443},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TeoISGDKC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ThilakarajRAG07,
author = {Richard Thilakaraj and
Krishnan Raghunathan and
Sharmila Anishetty and
Pennathur Gautam},
title = {\emph{In silico} identification of putative metal binding motifs},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {267--271},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl617},
doi = {10.1093/BIOINFORMATICS/BTL617},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ThilakarajRAG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TianMSSP07,
author = {Yuanyuan Tian and
Richard C. McEachin and
Carlos Santos and
David J. States and
Jignesh M. Patel},
title = {{SAGA:} a subgraph matching tool for biological graphs},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {232--239},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl571},
doi = {10.1093/BIOINFORMATICS/BTL571},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TianMSSP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TianXGB07,
author = {Tianhai Tian and
Songlin Xu and
Junbin Gao and
Kevin Burrage},
title = {Simulated maximum likelihood method for estimating kinetic rates in
gene expression},
journal = {Bioinform.},
volume = {23},
number = {1},
pages = {84--91},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl552},
doi = {10.1093/BIOINFORMATICS/BTL552},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TianXGB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TolenoMC07,
author = {Donna M. Toleno and
Peter L. Morrell and
Michael T. Clegg},
title = {Error detection in {SNP} data by considering the likelihood of recombinational
history implied by three-site combinations},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1807--1814},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm260},
doi = {10.1093/BIOINFORMATICS/BTM260},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TolenoMC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TomovicO07,
author = {Andrija Tomovic and
Edward J. Oakeley},
title = {Position dependencies in transcription factor binding sites},
journal = {Bioinform.},
volume = {23},
number = {8},
pages = {933--941},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm055},
doi = {10.1093/BIOINFORMATICS/BTM055},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TomovicO07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TomovicO07a,
author = {Andrija Tomovic and
Edward J. Oakeley},
title = {Quality estimation of multiple sequence alignments by Bayesian hypothesis
testing},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2488--2490},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm366},
doi = {10.1093/BIOINFORMATICS/BTM366},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TomovicO07a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TongTR07,
author = {Joo Chuan Tong and
Tin Wee Tan and
Shoba Ranganathan},
title = {\emph{In silico} grouping of peptide/HLA class {I} complexes using
structural interaction characteristics},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {177--183},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl563},
doi = {10.1093/BIOINFORMATICS/BTL563},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TongTR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TorarinssonHG07,
author = {Elfar Torarinsson and
Jakob Hull Havgaard and
Jan Gorodkin},
title = {Multiple structural alignment and clustering of {RNA} sequences},
journal = {Bioinform.},
volume = {23},
number = {8},
pages = {926--932},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm049},
doi = {10.1093/BIOINFORMATICS/BTM049},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TorarinssonHG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TorkamaniS07,
author = {Ali Torkamani and
Nicholas J. Schork},
title = {Accurate prediction of deleterious protein kinase polymorphisms},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2918--2925},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm437},
doi = {10.1093/BIOINFORMATICS/BTM437},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TorkamaniS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TorvikS07,
author = {Vetle I. Torvik and
Neil R. Smalheiser},
title = {A quantitative model for linking two disparate sets of articles in
{MEDLINE}},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1658--1665},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm161},
doi = {10.1093/BIOINFORMATICS/BTM161},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TorvikS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ToyodaMPHKS07,
author = {Tetsuro Toyoda and
Yoshiki Mochizuki and
Keith Player and
Naohiko Heida and
Norio Kobayashi and
Yoshiyuki Sakaki},
title = {OmicBrowse: a browser of multidimensional omics annotations},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {524--526},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl523},
doi = {10.1093/BIOINFORMATICS/BTL523},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ToyodaMPHKS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TragerKMSBSR07,
author = {Edward H. Trager and
Ritu Khanna and
Adrian Marrs and
Lawrence Siden and
Kari E. H. Branham and
Anand Swaroop and
Julia E. Richards},
title = {Madeline 2.0 {PDE:} a new program for local and web-based pedigree
drawing},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1854--1856},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm242},
doi = {10.1093/BIOINFORMATICS/BTM242},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TragerKMSBSR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TregouetG07,
author = {D. A. Tregouet and
V. Garelle},
title = {A new {JAVA} interface implementation of {THESIAS:} testing haplotype
effects in association studies},
journal = {Bioinform.},
volume = {23},
number = {8},
pages = {1038--1039},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm058},
doi = {10.1093/BIOINFORMATICS/BTM058},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TregouetG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Tseng07,
author = {George C. Tseng},
title = {Penalized and weighted \emph{K}-means for clustering with scattered
objects and prior information in high-throughput biological data},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2247--2255},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm320},
doi = {10.1093/BIOINFORMATICS/BTM320},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Tseng07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TsuruokaMTA07,
author = {Yoshimasa Tsuruoka and
John McNaught and
Jun'ichi Tsujii and
Sophia Ananiadou},
title = {Learning string similarity measures for gene/protein name dictionary
look-up using logistic regression},
journal = {Bioinform.},
volume = {23},
number = {20},
pages = {2768--2774},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm393},
doi = {10.1093/BIOINFORMATICS/BTM393},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TsuruokaMTA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TungH07,
author = {Chun{-}Wei Tung and
Shinn{-}Ying Ho},
title = {{POPI:} predicting immunogenicity of {MHC} class {I} binding peptides
by mining informative physicochemical properties},
journal = {Bioinform.},
volume = {23},
number = {8},
pages = {942--949},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm061},
doi = {10.1093/BIOINFORMATICS/BTM061},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/TungH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/UcarNRTPSJ07,
author = {Duygu Ucar and
Isaac Neuhaus and
Petra Ross{-}MacDonald and
Charles Tilford and
Srinivasan Parthasarathy and
Nathan O. Siemers and
Rui{-}Ru Ji},
title = {Construction of a reference gene association network from multiple
profiling data: application to data analysis},
journal = {Bioinform.},
volume = {23},
number = {20},
pages = {2716--2724},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm423},
doi = {10.1093/BIOINFORMATICS/BTM423},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/UcarNRTPSJ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Urbanczyk-WochniakS07,
author = {Ewa Urbanczyk{-}Wochniak and
Lloyd W. Sumner},
title = {MedicCyc: a biochemical pathway database for \emph{Medicago truncatula}},
journal = {Bioinform.},
volume = {23},
number = {11},
pages = {1418--1423},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm040},
doi = {10.1093/BIOINFORMATICS/BTM040},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Urbanczyk-WochniakS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ValenciaB07,
author = {Alfonso Valencia and
Alex Bateman},
title = {Editorial},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {133},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl635},
doi = {10.1093/BIOINFORMATICS/BTL635},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ValenciaB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Valentini07,
author = {Giorgio Valentini},
title = {Mosclust: a software library for discovering significant structures
in bio-molecular data},
journal = {Bioinform.},
volume = {23},
number = {3},
pages = {387--389},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl600},
doi = {10.1093/BIOINFORMATICS/BTL600},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Valentini07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ValimakiGDM07,
author = {Niko V{\"{a}}lim{\"{a}}ki and
Wolfgang Gerlach and
Kashyap Dixit and
Veli M{\"{a}}kinen},
title = {Compressed suffix tree - a basis for genome-scale sequence analysis},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {629--630},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl681},
doi = {10.1093/BIOINFORMATICS/BTL681},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ValimakiGDM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/VallabhajosyulaS07,
author = {Ravishankar Rao Vallabhajosyula and
Herbert M. Sauro},
title = {Stochastic simulation {GUI} for biochemical networks},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1859--1861},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm231},
doi = {10.1093/BIOINFORMATICS/BTM231},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/VallabhajosyulaS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/VarshavskyGHL07,
author = {Roy Varshavsky and
Assaf Gottlieb and
David Horn and
Michal Linial},
title = {Unsupervised feature selection under perturbations: meeting the challenges
of biological data},
journal = {Bioinform.},
volume = {23},
number = {24},
pages = {3343--3349},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm528},
doi = {10.1093/BIOINFORMATICS/BTM528},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/VarshavskyGHL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/VasmatzisKKTK07,
author = {George Vasmatzis and
Eric W. Klee and
Dagmar M. Kube and
Terry M. Therneau and
Farhad Kosari},
title = {Quantitating tissue specificity of human genes to facilitate biomarker
discovery},
journal = {Bioinform.},
volume = {23},
number = {11},
pages = {1348--1355},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm102},
doi = {10.1093/BIOINFORMATICS/BTM102},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/VasmatzisKKTK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/VenkatramanO07,
author = {E. S. Venkatraman and
Adam B. Olshen},
title = {A faster circular binary segmentation algorithm for the analysis of
array {CGH} data},
journal = {Bioinform.},
volume = {23},
number = {6},
pages = {657--663},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl646},
doi = {10.1093/BIOINFORMATICS/BTL646},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/VenkatramanO07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/VeraCCT07,
author = {Julio Vera and
Raul Curto and
Marta Cascante and
N{\'{e}}stor V. Torres},
title = {Detection of potential enzyme targets by metabolic modelling and optimization:
Application to a simple enzymopathy},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2281--2289},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm326},
doi = {10.1093/BIOINFORMATICS/BTM326},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/VeraCCT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/VeraSOW07,
author = {Julio Vera and
Cheng Sun and
Yvonne Oertel and
Olaf Wolkenhauer},
title = {PLMaddon: a power-law module for the Matlab\({}^{\mbox{TM}}\) SBToolbox},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2638--2640},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm245},
doi = {10.1093/BIOINFORMATICS/BTM245},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/VeraSOW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Verkhivker07,
author = {Gennady Verkhivker},
title = {Exploring sequence-structure relationships in the tyrosine kinome
space: functional classification of the binding specificity mechanisms
for cancer therapeutics},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {1919--1926},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm277},
doi = {10.1093/BIOINFORMATICS/BTM277},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Verkhivker07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/VienneGM07,
author = {Damien M. de Vienne and
Tatiana Giraud and
Olivier C. Martin},
title = {A congruence index for testing topological similarity between trees},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3119--3124},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm500},
doi = {10.1093/BIOINFORMATICS/BTM500},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/VienneGM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ViksnaG07,
author = {Juris Viksna and
David R. Gilbert},
title = {Assessment of the probabilities for evolutionary structural changes
in protein folds},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {832--841},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm022},
doi = {10.1093/BIOINFORMATICS/BTM022},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ViksnaG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/VoegeleTSCTC07,
author = {Catherine Voegele and
Sean V. Tavtigian and
D. de Silva and
S. Cuber and
Alun Thomas and
Florence Le Calvez{-}Kelm},
title = {A Laboratory Information Management System {(LIMS)} for a high throughput
genetic platform aimed at candidate gene mutation screening},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2504--2506},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm365},
doi = {10.1093/BIOINFORMATICS/BTM365},
timestamp = {Thu, 19 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/VoegeleTSCTC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WanCLED07,
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Guorong Chen and
Feng Luo and
Michael Emch and
Ruben O. Donis},
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number = {18},
pages = {2368--2375},
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biburl = {https://dblp.org/rec/journals/bioinformatics/WanCLED07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangCL07,
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Guang Chen and
Hongzhe Li},
title = {Group {SCAD} regression analysis for microarray time course gene expression
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journal = {Bioinform.},
volume = {23},
number = {12},
pages = {1486--1494},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm125},
doi = {10.1093/BIOINFORMATICS/BTM125},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
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bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangCYZY07,
author = {Zhanfeng Wang and
Yuan{-}chin Ivan Chang and
Zhiliang Ying and
Liang Zhu and
Yaning Yang},
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number = {20},
pages = {2788--2794},
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}
@article{DBLP:journals/bioinformatics/WangDPYC07,
author = {James Zijun Wang and
Zhidian Du and
Rapeeporn Payattakool and
Philip S. Yu and
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}
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Robin Ray Gutell and
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volume = {23},
number = {24},
pages = {3289--3296},
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doi = {10.1093/BIOINFORMATICS/BTM485},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WangGM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangLZYNSSXCW07,
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Huai Li and
Yitan Zhu and
Malik Yousef and
Michael Nebozhyn and
Michael M. Showe and
Louise C. Showe and
Jianhua Xuan and
Robert Clarke and
Yue Joseph Wang},
title = {{VISDA:} an open-source caBIG\({}^{\mbox{TM}}\) analytical tool for
data clustering and beyond},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {2024--2027},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm290},
doi = {10.1093/BIOINFORMATICS/BTM290},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WangLZYNSSXCW07.bib},
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}
@article{DBLP:journals/bioinformatics/WangMPKP07,
author = {Yonghong Wang and
Ze{-}Hong Miao and
Yves Pommier and
Ernest S. Kawasaki and
Audrey Player},
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volume = {23},
number = {16},
pages = {2088--2095},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm306},
doi = {10.1093/BIOINFORMATICS/BTM306},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
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bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangWZC07,
author = {Rui{-}Sheng Wang and
Yong Wang and
Xiang{-}Sun Zhang and
Luonan Chen},
title = {Inferring transcriptional regulatory networks from high-throughput
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volume = {23},
number = {22},
pages = {3056--3064},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm465},
doi = {10.1093/BIOINFORMATICS/BTM465},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/WangWZC07.bib},
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}
@article{DBLP:journals/bioinformatics/WangYMZ07,
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Yudi Yang and
Hongwu Ma and
Xue{-}Ming Zhao},
title = {Metabolic network properties help assign weights to elementary modes
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volume = {23},
number = {9},
pages = {1049--1052},
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}
@article{DBLP:journals/bioinformatics/WangZ07,
author = {Sijian Wang and
Ji Zhu},
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volume = {23},
number = {8},
pages = {972--979},
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timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WangZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WarrenSJH07,
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Granger G. Sutton and
Steven J. M. Jones and
Robert A. Holt},
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volume = {23},
number = {4},
pages = {500--501},
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url = {https://doi.org/10.1093/bioinformatics/btl629},
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}
@article{DBLP:journals/bioinformatics/WarthmannFW07,
author = {Norman Warthmann and
Joffrey Fitz and
Detlef Weigel},
title = {{MSQT} for choosing {SNP} assays from multiple {DNA} alignments},
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volume = {23},
number = {20},
pages = {2784--2787},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm428},
doi = {10.1093/BIOINFORMATICS/BTM428},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WarthmannFW07.bib},
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}
@article{DBLP:journals/bioinformatics/Webb-RobertsonPSKOAH07,
author = {Bobbie{-}Jo M. Webb{-}Robertson and
Elena S. Peterson and
Mudita Singhal and
Kyle R. Klicker and
Christopher S. Oehmen and
Joshua N. Adkins and
Susan L. Havre},
title = {PQuad - a visual analysis platform for proteomic data exploration
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number = {13},
pages = {1705--1707},
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url = {https://doi.org/10.1093/bioinformatics/btm132},
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timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Webb-RobertsonPSKOAH07.bib},
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}
@article{DBLP:journals/bioinformatics/WeeTR07,
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Tin Wee Tan and
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volume = {23},
number = {23},
pages = {3241--3243},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm334},
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timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WeeTR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WeiL07,
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title = {A Markov random field model for network-based analysis of genomic
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volume = {23},
number = {12},
pages = {1537--1544},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm129},
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timestamp = {Thu, 28 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/WeiL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WernickeR07,
author = {Sebastian Wernicke and
Florian Rasche},
title = {Simple and fast alignment of metabolic pathways by exploiting local
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volume = {23},
number = {15},
pages = {1978--1985},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm279},
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timestamp = {Sun, 20 Nov 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WernickeR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WielKVWWY07,
author = {Mark A. van de Wiel and
Kyung In Kim and
Sjoerd J. Vosse and
Wessel N. van Wieringen and
Saskia M. Wilting and
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title = {CGHcall: calling aberrations for array {CGH} tumor profiles},
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volume = {23},
number = {7},
pages = {892--894},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm030},
doi = {10.1093/BIOINFORMATICS/BTM030},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WielKVWWY07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WijayaRYS07,
author = {Edward Wijaya and
Kanagasabai Rajaraman and
Siu{-}Ming Yiu and
Wing{-}Kin Sung},
title = {Detection of generic spaced motifs using submotif pattern mining},
journal = {Bioinform.},
volume = {23},
number = {12},
pages = {1476--1485},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm118},
doi = {10.1093/BIOINFORMATICS/BTM118},
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biburl = {https://dblp.org/rec/journals/bioinformatics/WijayaRYS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WoernerCH07,
author = {August E. Woerner and
Murray P. Cox and
Michael F. Hammer},
title = {Recombination-filtered genomic datasets by information maximization},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1851--1853},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm253},
doi = {10.1093/BIOINFORMATICS/BTM253},
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biburl = {https://dblp.org/rec/journals/bioinformatics/WoernerCH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WongN07,
author = {Wendy S. W. Wong and
Rasmus Nielsen},
title = {Finding \emph{cis}-regulatory modules in \emph{Drosophila} using phylogenetic
hidden Markov models},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2031--2037},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm299},
doi = {10.1093/BIOINFORMATICS/BTM299},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WongN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WongWW07,
author = {Dorothy S. V. Wong and
Frederick K. Wong and
Graham R. Wood},
title = {A multi-stage approach to clustering and imputation of gene expression
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volume = {23},
number = {8},
pages = {998--1005},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm053},
doi = {10.1093/BIOINFORMATICS/BTM053},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WongWW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WoodVM07,
author = {Ian A. Wood and
Peter M. Visscher and
Kerrie L. Mengersen},
title = {Classification based upon gene expression data: bias and precision
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journal = {Bioinform.},
volume = {23},
number = {11},
pages = {1363--1370},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm117},
doi = {10.1093/BIOINFORMATICS/BTM117},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/WoodVM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WrightHGGJBVSWZ07,
author = {Fred A. Wright and
Hanwen Huang and
Xiaojun Guan and
Kevin Gamiel and
Clark D. Jeffries and
William T. Barry and
Fernando Pardo{-}Manuel de Villena and
Patrick F. Sullivan and
Kirk C. Wilhelmsen and
Fei Zou},
title = {Simulating association studies: a data-based resampling method for
candidate regions or whole genome scans},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2581--2588},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm386},
doi = {10.1093/BIOINFORMATICS/BTM386},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WrightHGGJBVSWZ07.bib},
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}
@article{DBLP:journals/bioinformatics/WuCWHGL07,
author = {Xiaomeng Wu and
Zhipeng Cai and
Xiu{-}Feng Wan and
Tin Hoang and
Randy Goebel and
Guohui Lin},
title = {Nucleotide composition string selection in {HIV-1} subtyping using
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journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1744--1752},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm248},
doi = {10.1093/BIOINFORMATICS/BTM248},
timestamp = {Wed, 30 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/WuCWHGL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WuZBCZ07,
author = {Chunlei Wu and
Haitao Zhao and
Keith A. Baggerly and
Roberto Carta and
Li Zhang},
title = {Short oligonucleotide probes containing G-stacks display abnormal
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journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2566--2572},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm271},
doi = {10.1093/BIOINFORMATICS/BTM271},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WuZBCZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/X07,
title = {{ECCB} 2006},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {1--2},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl631},
doi = {10.1093/BIOINFORMATICS/BTL631},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/X07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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title = {{ECCB} 2006 Organization},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {3--4},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl651},
doi = {10.1093/BIOINFORMATICS/BTL651},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/X07a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/X07b,
title = {{CASPAR:} a hierarchical Bayesian approach to predict survival times
in cancer from gene expression data},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {266},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl576},
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timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/X07b.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XiangMBWH07,
author = {Zuoshuang Xiang and
Rebecca M. Minter and
Xiaoming Bi and
Peter J. Woolf and
Yongqun He},
title = {miniTUBA: medical inference by network integration of temporal data
using Bayesian analysis},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2423--2432},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm372},
doi = {10.1093/BIOINFORMATICS/BTM372},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/XiangMBWH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XiangQH07,
author = {Zuoshuang Xiang and
Zhaohui S. Qin and
Yongqun He},
title = {CRCView: a web server for analyzing and visualizing microarray gene
expression data using model-based clustering},
journal = {Bioinform.},
volume = {23},
number = {14},
pages = {1843--1845},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm238},
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timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/XiangQH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XiaoD07,
author = {Yufei Xiao and
Edward R. Dougherty},
title = {The impact of function perturbations in Boolean networks},
journal = {Bioinform.},
volume = {23},
number = {10},
pages = {1265--1273},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm093},
doi = {10.1093/BIOINFORMATICS/BTM093},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/XiaoD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XiaoSYY07,
author = {Yuanyuan Xiao and
Mark R. Segal and
Yee Hwa Yang and
Ru{-}Fang Yeh},
title = {A multi-array multi-SNP genotyping algorithm for Affymetrix {SNP}
microarrays},
journal = {Bioinform.},
volume = {23},
number = {12},
pages = {1459--1467},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm131},
doi = {10.1093/BIOINFORMATICS/BTM131},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/XiaoSYY07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XuCOD07,
author = {Qifang Xu and
Adrian A. Canutescu and
Zoran Obradovic and
Roland L. Dunbrack Jr.},
title = {ProtBuD: a database of biological unit structures of protein families
and superfamilies},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {2028},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm273},
doi = {10.1093/BIOINFORMATICS/BTM273},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/XuCOD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XuFHMMF07,
author = {Hua Xu and
Jung{-}Wei Fan and
George Hripcsak and
Eneida A. Mendon{\c{c}}a and
Marianthi Markatou and
Carol Friedman},
title = {Gene symbol disambiguation using knowledge-based profiles},
journal = {Bioinform.},
volume = {23},
number = {8},
pages = {1015--1022},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm056},
doi = {10.1093/BIOINFORMATICS/BTM056},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/XuFHMMF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XuJS07,
author = {Xing Xu and
Yongmei Ji and
Gary D. Stormo},
title = {{RNA} Sampler: a new sampling based algorithm for common {RNA} secondary
structure prediction and structural alignment},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {1883--1891},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm272},
doi = {10.1093/BIOINFORMATICS/BTM272},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/XuJS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XuKT07,
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Norman L. Kaplan and
Jack A. Taylor},
title = {TAGster: efficient selection of {LD} tag SNPs in single or multiple
populations},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3254--3255},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm426},
doi = {10.1093/BIOINFORMATICS/BTM426},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/XuKT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XuanWWM07,
author = {Weijian Xuan and
Pinglang Wang and
Stanley J. Watson and
Fan Meng},
title = {Medline search engine for finding genetic markers with biological
significance},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2477--2484},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm375},
doi = {10.1093/BIOINFORMATICS/BTM375},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/XuanWWM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YamanishiBV07,
author = {Yoshihiro Yamanishi and
Francis R. Bach and
Jean{-}Philippe Vert},
title = {Glycan classification with tree kernels},
journal = {Bioinform.},
volume = {23},
number = {10},
pages = {1211--1216},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm090},
doi = {10.1093/BIOINFORMATICS/BTM090},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YamanishiBV07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YandellMBSVMNWSY07,
author = {Brian S. Yandell and
Tapan Mehta and
Samprit Banerjee and
Daniel Shriner and
Ramprasad Venkataraman and
Jee Young Moon and
W. Whipple Neely and
Hao Wu and
Randy von Smith and
Nengjun Yi},
title = {R/qtlbim: {QTL} with Bayesian Interval Mapping in experimental crosses},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {641--643},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm011},
doi = {10.1093/BIOINFORMATICS/BTM011},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/YandellMBSVMNWSY07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YangC07,
author = {Hyuna Yang and
Gary A. Churchill},
title = {Estimating \emph{p}-values in small microarray experiments},
journal = {Bioinform.},
volume = {23},
number = {1},
pages = {38--43},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl548},
doi = {10.1093/BIOINFORMATICS/BTL548},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YangC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YangFKYA07,
author = {Eric Yang and
Panagiota T. Foteinou and
K. R. King and
Martin L. Yarmush and
Ioannis P. Androulakis},
title = {A novel non-overlapping bi-clustering algorithm for network generation
using living cell array data},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2306--2313},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm335},
doi = {10.1093/BIOINFORMATICS/BTM335},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/YangFKYA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YangJZZXW07,
author = {Long Yang and
Gulei Jin and
Xiangqian Zhao and
Yan Zheng and
Zhaohua Xu and
Weiren Wu},
title = {{PIP:} a database of potential intron polymorphism markers},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2174--2177},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm296},
doi = {10.1093/BIOINFORMATICS/BTM296},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YangJZZXW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YangOZZS07,
author = {Zhu Yang and
John D. O'Brien and
Xiaobin Zheng and
Huaiqiu Zhu and
Zhen{-}Su She},
title = {Tree and rate estimation by local evaluation of heterochronous nucleotide
data},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {169--176},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl577},
doi = {10.1093/BIOINFORMATICS/BTL577},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YangOZZS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YangZW07,
author = {Jian Yang and
Jun Zhu and
Robert W. Williams},
title = {Mapping the genetic architecture of complex traits in experimental
populations},
journal = {Bioinform.},
volume = {23},
number = {12},
pages = {1527--1536},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm143},
doi = {10.1093/BIOINFORMATICS/BTM143},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YangZW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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author = {Chun Ye and
Eleazar Eskin},
title = {Discovering tightly regulated and differentially expressed gene sets
in whole genome expression data},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {84--90},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl315},
doi = {10.1093/BIOINFORMATICS/BTL315},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YeE07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YeKI07,
author = {Kai Ye and
Walter A. Kosters and
Adriaan P. IJzerman},
title = {An efficient, versatile and scalable pattern growth approach to mine
frequent patterns in unaligned protein sequences},
journal = {Bioinform.},
volume = {23},
number = {6},
pages = {687--693},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl665},
doi = {10.1093/BIOINFORMATICS/BTL665},
timestamp = {Wed, 27 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/YeKI07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YeZGLLLW07,
author = {Zhi{-}Qiang Ye and
Shuqi Zhao and
Ge Gao and
Xiao{-}Qiao Liu and
Robert E. Langlois and
Hui Lu and
Liping Wei},
title = {Finding new structural and sequence attributes to predict possible
disease association of single amino acid polymorphism {(SAP)}},
journal = {Bioinform.},
volume = {23},
number = {12},
pages = {1444--1450},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm119},
doi = {10.1093/BIOINFORMATICS/BTM119},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YeZGLLLW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YiST07,
author = {Gangman Yi and
Sing{-}Hoi Sze and
Michael R. Thon},
title = {Identifying clusters of functionally related genes in genomes},
journal = {Bioinform.},
volume = {23},
number = {9},
pages = {1053--1060},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl673},
doi = {10.1093/BIOINFORMATICS/BTL673},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YiST07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YipYKSG07,
author = {Kevin Y. Yip and
Haiyuan Yu and
Philip M. Kim and
Martin H. Schultz and
Mark Gerstein},
title = {The tYNA platform for comparative interactomics: a web tool for managing,
comparing and mining multiple networks},
journal = {Bioinform.},
volume = {23},
number = {8},
pages = {1048},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm099},
doi = {10.1093/BIOINFORMATICS/BTM099},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YipYKSG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YoneyaM07,
author = {Takashi Yoneya and
Hiroshi Mamitsuka},
title = {A hidden Markov model-based approach for identifying timing differences
in gene expression under different experimental factors},
journal = {Bioinform.},
volume = {23},
number = {7},
pages = {842--849},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl667},
doi = {10.1093/BIOINFORMATICS/BTL667},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YoneyaM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YooTKZ07,
author = {Yun Joo Yoo and
Jianming Tang and
Richard A. Kaslow and
Kui Zhang},
title = {Haplotype inference for present-absent genotype data using previously
identified haplotypes and haplotype patterns},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2399--2406},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm371},
doi = {10.1093/BIOINFORMATICS/BTM371},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YooTKZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YoonSNL07,
author = {Jeongah Yoon and
Yaguang Si and
Ryan Nolan and
Kyongbum Lee},
title = {Modular decomposition of metabolic reaction networks based on flux
analysis and pathway projection},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2433--2440},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm374},
doi = {10.1093/BIOINFORMATICS/BTM374},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YoonSNL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YosefYTKBRS07,
author = {Nir Yosef and
Zohar Yakhini and
Anya Tsalenko and
Vessela N. Kristensen and
Anne{-}Lise B{\o}rresen{-}Dale and
Eytan Ruppin and
Roded Sharan},
title = {A supervised approach for identifying discriminating genotype patterns
and its application to breast cancer data},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {91--98},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl298},
doi = {10.1093/BIOINFORMATICS/BTL298},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/YosefYTKBRS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YouLGLDDA07,
author = {Frank M. You and
Ming{-}Cheng Luo and
Yong Qiang Gu and
Gerard R. Lazo and
Karin Deal and
Jan Dvorak and
Olin D. Anderson},
title = {GenoProfiler: batch processing of high-throughput capillary fingerprinting
data},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {240--242},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl494},
doi = {10.1093/BIOINFORMATICS/BTL494},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YouLGLDDA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YousefJKSS07,
author = {Malik Yousef and
Segun Jung and
Andrew V. Kossenkov and
Louise C. Showe and
Michael K. Showe},
title = {Na{\"{\i}}ve Bayes for microRNA target predictions - machine
learning for microRNA targets},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {2987--2992},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm484},
doi = {10.1093/BIOINFORMATICS/BTM484},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YousefJKSS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YuJSG07,
author = {Haiyuan Yu and
Ronald Jansen and
Gustavo Stolovitzky and
Mark Gerstein},
title = {Total ancestry measure: quantifying the similarity in tree-like classification,
with genomic applications},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2163--2173},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm291},
doi = {10.1093/BIOINFORMATICS/BTM291},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YuJSG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YuWW07,
author = {Zhiwen Yu and
Hau{-}San Wong and
Hong{-}Qiang Wang},
title = {Graph-based consensus clustering for class discovery from gene expression
data},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2888--2896},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm463},
doi = {10.1093/BIOINFORMATICS/BTM463},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YuWW07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YuanL07,
author = {Shinsheng Yuan and
Ker{-}Chau Li},
title = {Context-dependent clustering for dynamic cellular state modeling of
microarray gene expression},
journal = {Bioinform.},
volume = {23},
number = {22},
pages = {3039--3047},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm457},
doi = {10.1093/BIOINFORMATICS/BTM457},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YuanL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YunLJCPML07,
author = {Hongseok Yun and
Jeong Wook Lee and
Joonwoo Jeong and
Jaesung Chung and
Jong Myoung Park and
Han Na Myoung and
Sang Yup Lee},
title = {EcoProDB: the Escherichia coli protein database},
journal = {Bioinform.},
volume = {23},
number = {18},
pages = {2501--2503},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm351},
doi = {10.1093/BIOINFORMATICS/BTM351},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YunLJCPML07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhangCL07,
author = {Zhuqing Zhang and
Hao Chen and
Luhua Lai},
title = {Identification of amyloid fibril-forming segments based on structure
and residue-based statistical potential},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2218--2225},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm325},
doi = {10.1093/BIOINFORMATICS/BTM325},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhangCL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhangCND07,
author = {Wuyan Zhang and
Alicia L. Carriquiry and
Dan Nettleton and
Jack C. M. Dekkers},
title = {Pooling mRNA in microarray experiments and its effect on power},
journal = {Bioinform.},
volume = {23},
number = {10},
pages = {1217--1224},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm081},
doi = {10.1093/BIOINFORMATICS/BTM081},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhangCND07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhangHZHWZHLCJ07,
author = {Jing{-}Xian Zhang and
Wei{-}Juan Huang and
Jing{-}Hua Zeng and
Wen{-}Hui Huang and
Yi Wang and
Rui Zhao and
Bu{-}Cong Han and
Qing{-}Feng Liu and
Yuzong Chen and
Zhi Liang Ji},
title = {{DITOP:} drug-induced toxicity related protein database},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1710--1712},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm139},
doi = {10.1093/BIOINFORMATICS/BTM139},
timestamp = {Wed, 24 Jul 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhangHZHWZHLCJ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhangJLTZZ07,
author = {Jing Zhang and
Bo Jiang and
Ming Li and
John Tromp and
Xuegong Zhang and
Michael Q. Zhang},
title = {Computing exact \emph{P}-values for {DNA} motifs},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {531--537},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl662},
doi = {10.1093/BIOINFORMATICS/BTL662},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhangJLTZZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhangJZ07,
author = {Jiexin Zhang and
Yuan Ji and
Li Zhang},
title = {Extracting three-way gene interactions from microarray data},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2903--2909},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm482},
doi = {10.1093/BIOINFORMATICS/BTM482},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhangJZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhangK07,
author = {Xu Zhang and
Tamer Kahveci},
title = {{QOMA:} quasi-optimal multiple alignment of protein sequences},
journal = {Bioinform.},
volume = {23},
number = {2},
pages = {162--168},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl590},
doi = {10.1093/BIOINFORMATICS/BTL590},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhangK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhangKZCTT07,
author = {Zong Hong Zhang and
Judice L. Y. Koh and
Guanglan Zhang and
Khar Heng Choo and
Martti T. Tammi and
Joo Chuan Tong},
title = {AllerTool: a web server for predicting allergenicity and allergic
cross-reactivity in proteins},
journal = {Bioinform.},
volume = {23},
number = {4},
pages = {504--506},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl621},
doi = {10.1093/BIOINFORMATICS/BTL621},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhangKZCTT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhaoEMM07,
author = {Hui Zhao and
Kristof Engelen and
Bart De Moor and
Kathleen Marchal},
title = {{CALIB:} a Bioconductor package for estimating absolute expression
levels from two-color microarray data},
journal = {Bioinform.},
volume = {23},
number = {13},
pages = {1700--1701},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm159},
doi = {10.1093/BIOINFORMATICS/BTM159},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhaoEMM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhengHLLLL07,
author = {Xiuwen Zheng and
Hung{-}Chung Huang and
Wenyuan Li and
Peng Liu and
Quan{-}Zhen Li and
Ying Liu},
title = {Modeling nonlinearity in dilution design microarray data},
journal = {Bioinform.},
volume = {23},
number = {11},
pages = {1339--1347},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm002},
doi = {10.1093/BIOINFORMATICS/BTM002},
timestamp = {Fri, 19 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhengHLLLL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhengLLPULP07,
author = {Ming Zheng and
Peng Lu and
Yanzhou Liu and
Joseph Pease and
Jonathan Usuka and
Guochun Liao and
Gary Peltz},
title = {2D {NMR} metabonomic analysis: a novel method for automated peak alignment},
journal = {Bioinform.},
volume = {23},
number = {21},
pages = {2926--2933},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm427},
doi = {10.1093/BIOINFORMATICS/BTM427},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhengLLPULP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhouCOSP07,
author = {Yiyong Zhou and
Corentin Cras{-}M{\'{e}}neur and
Mitsuru Ohsugi and
Gary D. Stormo and
M. Alan Permutt},
title = {A global approach to identify differentially expressed genes in cDNA
(two-color) microarray experiments},
journal = {Bioinform.},
volume = {23},
number = {16},
pages = {2073--2079},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm292},
doi = {10.1093/BIOINFORMATICS/BTM292},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhouCOSP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhouP07,
author = {Jie Zhou and
Hanchuan Peng},
title = {Automatic recognition and annotation of gene expression patterns of
fly embryos},
journal = {Bioinform.},
volume = {23},
number = {5},
pages = {589--596},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl680},
doi = {10.1093/BIOINFORMATICS/BTL680},
timestamp = {Tue, 01 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhouP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhouP07a,
author = {Jie Zhou and
Hanchuan Peng},
title = {Automatic recognition and annotation of gene expression patterns of
fly embryos},
journal = {Bioinform.},
volume = {23},
number = {12},
pages = {1571--1572},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm244},
doi = {10.1093/BIOINFORMATICS/BTM244},
timestamp = {Tue, 01 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhouP07a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhouPKM07,
author = {Ruhong Zhou and
Laxmi Parida and
Kush Kapila and
Sudhir P. Mudur},
title = {{PROTERAN:} animated terrain evolution for visual analysis of patterns
in protein folding trajectory},
journal = {Bioinform.},
volume = {23},
number = {1},
pages = {99--106},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btl538},
doi = {10.1093/BIOINFORMATICS/BTL538},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhouPKM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhouQ07,
author = {Huan{-}Xiang Zhou and
Sanbo Qin},
title = {Interaction-site prediction for protein complexes: a critical assessment},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2203--2209},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm323},
doi = {10.1093/BIOINFORMATICS/BTM323},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhouQ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhouT07,
author = {Xin Zhou and
David P. Tuck},
title = {{MSVM-RFE:} extensions of {SVM-RFE} for multiclass gene selection
on {DNA} microarray data},
journal = {Bioinform.},
volume = {23},
number = {9},
pages = {1106--1114},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm036},
doi = {10.1093/BIOINFORMATICS/BTM036},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhouT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhouT07a,
author = {Xin Zhou and
David P. Tuck},
title = {{MSVM-RFE:} extensions of {SVM-RFE} for multiclass gene selection
on {DNA} microarray data},
journal = {Bioinform.},
volume = {23},
number = {15},
pages = {2029},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm284},
doi = {10.1093/BIOINFORMATICS/BTM284},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhouT07a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhuGGZXHL07,
author = {Qihui Zhu and
Anyuan Guo and
Ge Gao and
Yingfu Zhong and
Meng Xu and
Minren Huang and
Jingchu Luo},
title = {{DPTF:} a database of poplar transcription factors},
journal = {Bioinform.},
volume = {23},
number = {10},
pages = {1307--1308},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm113},
doi = {10.1093/BIOINFORMATICS/BTM113},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhuGGZXHL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhuLL07,
author = {Dongxiao Zhu and
Youjuan Li and
Hua Li},
title = {Multivariate correlation estimator for inferring functional relationships
from replicated genome-wide data},
journal = {Bioinform.},
volume = {23},
number = {17},
pages = {2298--2305},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm328},
doi = {10.1093/BIOINFORMATICS/BTM328},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhuLL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZuckoSCZLCKH07,
author = {Jurica Zucko and
N. Skunca and
Tomaz Curk and
Blaz Zupan and
Paul F. Long and
John Cullum and
R. H. Kessin and
Daslav Hranueli},
title = {Polyketide synthase genes and the natural products potential of \emph{Dictyostelium
discoideum}},
journal = {Bioinform.},
volume = {23},
number = {19},
pages = {2543--2549},
year = {2007},
url = {https://doi.org/10.1093/bioinformatics/btm381},
doi = {10.1093/BIOINFORMATICS/BTM381},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZuckoSCZLCKH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AsgaryJAK07,
title = {Analysis and identification of beta-turn types using multinomial logistic
regression and artificial neural network},
journal = {Bioinform.},
volume = {23},
number = {23},
pages = {3125--3130},
year = {2007},
note = {Withdrawn.},
url = {https://doi.org/10.1093/bioinformatics/btm324},
doi = {10.1093/BIOINFORMATICS/BTM324},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AsgaryJAK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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