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@article{DBLP:journals/biodb/AlterBS0BSM15,
author = {Svenja Alter and
Kai Christian Bader and
Manuel Spannagl and
Yu Wang and
Eva Bauer and
Chris{-}Carolin Sch{\"{o}}n and
Klaus F. X. Mayer},
title = {DroughtDB: an expert-curated compilation of plant drought stress genes
and their homologs in nine species},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav046},
doi = {10.1093/DATABASE/BAV046},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/AlterBS0BSM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/AshoorKRB15,
author = {Haitham Ashoor and
Dimitrios Kleftogiannis and
Aleksandar Radovanovic and
Vladimir B. Bajic},
title = {DENdb: database of integrated human enhancers},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav085},
doi = {10.1093/DATABASE/BAV085},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/AshoorKRB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BabbittBBBCCCFG15,
author = {Patricia C. Babbitt and
Pantelis G. Bagos and
Amos Bairoch and
Alex Bateman and
Arnaud Chatonnet and
Mark Jinan Chen and
David J. Craik and
Robert D. Finn and
David E. Gloriam and
Daniel H. Haft and
Bernard Henrissat and
Gemma L. Holliday and
Vignir {\'{I}}sberg and
Quentin Kaas and
David Landsman and
Nicolas Lenfant and
Gerard Manning and
Nozomi Nagano and
Narayanaswamy Srinivasan and
Claire O'Donovan and
Kim D. Pruitt and
Ramanathan Sowdhamini and
Neil D. Rawlings and
Milton H. Saier Jr. and
Joanna L. Sharman and
Michael Spedding and
Konstantinos D. Tsirigos and
{\AA}ke V{\"{a}}stermark and
Gerrit Vriend},
title = {Creating a specialist protein resource network: a meeting report for
the protein bioinformatics and community resources retreat},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav063},
doi = {10.1093/DATABASE/BAV063},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/BabbittBBBCCCFG15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BagewadiADIENPH15,
author = {Shweta Bagewadi Kawalia and
Subash Adhikari and
Anjani Dhrangadhariya and
Afroza Khanam Irin and
Christian Ebeling and
Aishwarya Alex Namasivayam and
Matthew Page and
Martin Hofmann{-}Apitius and
Philipp Senger},
title = {\emph{NeuroTransDB}: highly curated and structured transcriptomic
metadata for neurodegenerative diseases},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav099},
doi = {10.1093/DATABASE/BAV099},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/BagewadiADIENPH15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BakerPRHS15,
author = {Edward Baker and
Ben W. Price and
Simon D. Rycroft and
Jon Hill and
Vincent S. Smith},
title = {BioAcoustica: a free and open repository and analysis platform for
bioacoustics},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav054},
doi = {10.1093/DATABASE/BAV054},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/BakerPRHS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BastianCGGHHLNO15,
author = {Frederic B. Bastian and
Marcus C. Chibucos and
Pascale Gaudet and
Michelle G. Giglio and
Gemma L. Holliday and
Hong Huang and
Suzanna E. Lewis and
Anne Niknejad and
Sandra E. Orchard and
Sylvain Poux and
Nives Skunca and
Marc Robinson{-}Rechavi},
title = {The Confidence Information Ontology: a step towards a standard for
asserting confidence in annotations},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav043},
doi = {10.1093/DATABASE/BAV043},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/BastianCGGHHLNO15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BelinkyNSZSSL15,
author = {Frida Belinky and
Noam Nativ and
Gil Stelzer and
Shahar Zimmerman and
Tsippi Iny Stein and
Marilyn Safran and
Doron Lancet},
title = {PathCards: multi-source consolidation of human biological pathways},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav006},
doi = {10.1093/DATABASE/BAV006},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/BelinkyNSZSSL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BhattacharyaMPS15,
author = {Sohini Bhattacharya and
Shriyaa Mittal and
Swati Panigrahi and
Purshotam Sharma and
Preethi S. P. and
Rahul Paul and
Sukanya Halder and
Antarip Halder and
Dhananjay Bhattacharyya and
Abhijit Mitra},
title = {{RNABP} {COGEST:} a resource for investigating functional RNAs},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav011},
doi = {10.1093/DATABASE/BAV011},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/BhattacharyaMPS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BoeufABCJ15,
author = {Dominique Boeuf and
St{\'{e}}phane Audic and
Loraine Brillet{-}Gu{\'{e}}guen and
Christophe Caron and
Christian Jeanthon},
title = {MicRhoDE: a curated database for the analysis of microbial rhodopsin
diversity and evolution},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav080},
doi = {10.1093/DATABASE/BAV080},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/BoeufABCJ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BoueTWHFPSSFAMV15,
author = {St{\'{e}}phanie Bou{\'{e}} and
Marja Talikka and
Jurjen Willem Westra and
William Hayes and
Anselmo Di Fabio and
Jennifer Park and
Walter K. Schlage and
Alain Sewer and
Brett Fields and
Sam Ansari and
Florian Martin and
Emilija Veljkovic and
Ren{\'{e}}e Kenney and
Manuel C. Peitsch and
Julia Hoeng},
title = {Causal biological network database: a comprehensive platform of causal
biological network models focused on the pulmonary and vascular systems},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav030},
doi = {10.1093/DATABASE/BAV030},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/BoueTWHFPSSFAMV15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BuzaJKKLPP15,
author = {Teresia M. Buza and
Sherman W. Jack and
Halid Kirunda and
Margaret L. Khaitsa and
Mark L. Lawrence and
Stephen Pruett and
Daniel G. Peterson},
title = {{ERAIZDA:} a model for holistic annotation of animal infectious and
zoonotic diseases},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav110},
doi = {10.1093/DATABASE/BAV110},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/BuzaJKKLPP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ChenZCTSXBLZJHB15,
author = {Guocai Chen and
Jieyi Zhao and
Trevor Cohen and
Cui Tao and
Jingchun Sun and
Hua Xu and
Elmer V. Bernstam and
Andrew Lawson and
Jia Zeng and
Amber M. Johnson and
Vijaykumar Holla and
Ann M. Bailey and
Humberto Lara{-}Guerra and
Beate Litzenburger and
Funda Meric{-}Bernstam and
W. Jim Zheng},
title = {Using Ontology Fingerprints to disambiguate gene name entities in
the biomedical literature},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav034},
doi = {10.1093/DATABASE/BAV034},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ChenZCTSXBLZJHB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ChienCCCWHC15,
author = {Chia{-}Hung Chien and
Yi{-}Fan Chiang{-}Hsieh and
Yi{-}An Chen and
Chi{-}Nga Chow and
Nai{-}Yun Wu and
Ping{-}Fu Hou and
Wen{-}Chi Chang},
title = {AtmiRNET: a web-based resource for reconstructing regulatory networks
of \emph{Arabidopsis} microRNAs},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav042},
doi = {10.1093/DATABASE/BAV042},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ChienCCCWHC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ChoiKHKHAJL15,
author = {Jaeyoung Choi and
Ki{-}Tae Kim and
Aram Huh and
Seomun Kwon and
Changyoung Hong and
Fred O. Asiegbu and
Junhyun Jeon and
Yong{-}Hwan Lee},
title = {dbHiMo: a web-based epigenomics platform for histone-modifying enzymes},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav052},
doi = {10.1093/DATABASE/BAV052},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ChoiKHKHAJL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ChowdhuryS15,
author = {Saikat Chowdhury and
Ram Rup Sarkar},
title = {Comparison of human cell signaling pathway databases - evolution,
drawbacks and challenges},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bau126},
doi = {10.1093/DATABASE/BAU126},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ChowdhuryS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/CollierGSROR15,
author = {Nigel Collier and
Tudor Groza and
Damian Smedley and
Peter N. Robinson and
Anika Oellrich and
Dietrich Rebholz{-}Schuhmann},
title = {PhenoMiner: from text to a database of phenotypes associated with
{OMIM} diseases},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav104},
doi = {10.1093/DATABASE/BAV104},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/CollierGSROR15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/CserhatiPBBGF15,
author = {Matyas F. Cserhati and
Sanjit Pandey and
James J. Beaudoin and
Lorena Baccaglini and
Chittibabu Guda and
Howard S. Fox},
title = {The National NeuroAIDS Tissue Consortium {(NNTC)} Database: an integrated
database for HIV-related studies},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav074},
doi = {10.1093/DATABASE/BAV074},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/CserhatiPBBGF15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/DahdulDILM15,
author = {Wasila M. Dahdul and
T. Alexander Dececchi and
Nizar Ibrahim and
Hilmar Lapp and
Paula M. Mabee},
title = {Moving the mountain: analysis of the effort required to transform
comparative anatomy into computable anatomy},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav040},
doi = {10.1093/DATABASE/BAV040},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/DahdulDILM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/DaviesT15,
author = {Nathaniel J. Davies and
Eran Tauber},
title = {WaspAtlas: a \emph{Nasonia vitripennis} gene database and analysis
platform},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav103},
doi = {10.1093/DATABASE/BAV103},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/DaviesT15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/DelgadoGLRRMM15,
author = {Ismael Navas{-}Delgado and
Mar{\'{\i}}a Jes{\'{u}}s Garc{\'{\i}}a{-}Godoy and
Esteban L{\'{o}}pez{-}Camacho and
Maciej Rybinski and
Armando Reyes{-}Palomares and
Miguel Angel Medina and
Jos{\'{e}} Francisco Aldana Montes},
title = {kpath: integration of metabolic pathway linked data},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav053},
doi = {10.1093/DATABASE/BAV053},
timestamp = {Wed, 15 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/DelgadoGLRRMM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/DerbyshireGLHMW15,
author = {Myra K. Derbyshire and
Noreen R. Gonzales and
Shennan Lu and
Jane He and
Gabriele H. Marchler and
Zhouxi Wang and
Aron Marchler{-}Bauer},
title = {Improving the consistency of domain annotation within the Conserved
Domain Database},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav012},
doi = {10.1093/DATABASE/BAV012},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/DerbyshireGLHMW15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/DoddamaniKKATRE15,
author = {Dadakhalandar Doddamani and
Aamir W. Khan and
A. V. S. K. Mohan Katta and
Gaurav Agarwal and
Mahendar Thudi and
Pradeep Ruperao and
David Edwards and
Rajeev K. Varshney},
title = {CicArVarDB: {SNP} and InDel database for advancing genetics research
and breeding applications in chickpea},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav078},
doi = {10.1093/DATABASE/BAV078},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/DoddamaniKKATRE15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/DongLZ15,
author = {Xiaobao Dong and
Xiaotian Lu and
Ziding Zhang},
title = {{BEAN} 2.0: an integrated web resource for the identification and
functional analysis of type {III} secreted effectors},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav064},
doi = {10.1093/DATABASE/BAV064},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/DongLZ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/EbertMNLS15,
author = {Peter Ebert and
Fabian M{\"{u}}ller and
Karl Nordstr{\"{o}}m and
Thomas Lengauer and
Marcel H. Schulz},
title = {A general concept for consistent documentation of computational analyses},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav050},
doi = {10.1093/DATABASE/BAV050},
timestamp = {Fri, 29 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/EbertMNLS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/EgorovaKT15,
author = {Ksenia S. Egorova and
A. N. Kondakova and
Philip V. Toukach},
title = {Carbohydrate Structure Database: tools for statistical analysis of
bacterial, plant and fungal glycomes},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav073},
doi = {10.1093/DATABASE/BAV073},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/EgorovaKT15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/EleftheriouBAS15,
author = {Stergiani V. Eleftheriou and
Marilena M. Bourdakou and
Emmanouil I. Athanasiadis and
George M. Spyrou},
title = {GeneStoryTeller: a mobile app for quick and comprehensive information
retrieval of human genes},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav048},
doi = {10.1093/DATABASE/BAV048},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/EleftheriouBAS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/FeiziBN15,
author = {Amir Feizi and
Amir Banaei{-}Esfahani and
Jens Nielsen},
title = {{HCSD:} the human cancer secretome database},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav051},
doi = {10.1093/DATABASE/BAV051},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/FeiziBN15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/FriasBBL15,
author = {Silvia Frias and
Kenneth Bryan and
Fiona S. L. Brinkman and
David J. Lynn},
title = {CerebralWeb: a Cytoscape.js plug-in to visualize networks stratified
by subcellular localization},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav041},
doi = {10.1093/DATABASE/BAV041},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/FriasBBL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/GarantLSP15,
author = {Jean{-}Michel Garant and
Mikael J. Luce and
Michelle S. Scott and
Jean{-}Pierre Perreault},
title = {{G4RNA:} an {RNA} G-quadruplex database},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav059},
doi = {10.1093/DATABASE/BAV059},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/GarantLSP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/GobeillGPVGBR15,
author = {Julien Gobeill and
Arnaud Gaudinat and
Emilie Pasche and
Dina Vishnyakova and
Pascale Gaudet and
Amos Bairoch and
Patrick Ruch},
title = {Deep Question Answering for protein annotation},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav081},
doi = {10.1093/DATABASE/BAV081},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/GobeillGPVGBR15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/GongLLWMCG15,
author = {Jing Gong and
Chun{-}Jie Liu and
Wei Liu and
Yuliang Wu and
Zhaowu Ma and
Hu Chen and
An{-}Yuan Guo},
title = {An update of miRNASNP database for better {SNP} selection by {GWAS}
data, miRNA expression and online tools},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav029},
doi = {10.1093/DATABASE/BAV029},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/GongLLWMCG15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/GrozaKDCOSCBZR15,
author = {Tudor Groza and
Sebastian K{\"{o}}hler and
Sandra C. Doelken and
Nigel Collier and
Anika Oellrich and
Damian Smedley and
Francisco M. Couto and
Gareth Baynam and
Andreas Zankl and
Peter N. Robinson},
title = {Automatic concept recognition using the Human Phenotype Ontology reference
and test suite corpora},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav005},
doi = {10.1093/DATABASE/BAV005},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/GrozaKDCOSCBZR15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/GuoXYLYZ15,
author = {Zhi{-}Wei Guo and
Chen Xie and
Jian{-}Rong Yang and
Jun{-}Hao Li and
Jian{-}Hua Yang and
Limin Zheng},
title = {MtiBase: a database for decoding microRNA target sites located within
{CDS} and 5{\({'}\)}UTR regions from CLIP-Seq and expression
profile datasets},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav102},
doi = {10.1093/DATABASE/BAV102},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/GuoXYLYZ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/HashemikhabirNJ15,
author = {Seyedsasan Hashemikhabir and
Yaseswini Neelamraju and
Sarath Chandra Janga},
title = {Database of {RNA} binding protein expression and disease dynamics
{(READ} {DB)}},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav072},
doi = {10.1093/DATABASE/BAV072},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/HashemikhabirNJ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/HegedusCVSSHRSS15,
author = {Tam{\'{a}}s Heged{\"{u}}s and
Pururawa Mayank Chaubey and
Gy{\"{o}}rgy V{\'{a}}rady and
Edit Szab{\'{o}} and
Hajnalka Sarank{\'{o}} and
Lia Hofstetter and
Bernd Roschitzki and
Bruno Stieger and
Bal{\'{a}}zs Sarkadi},
title = {Inconsistencies in the red blood cell membrane proteome analysis:
generation of a database for research and diagnostic applications},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav056},
doi = {10.1093/DATABASE/BAV056},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/HegedusCVSSHRSS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/HenkelWW15,
author = {Ron Henkel and
Olaf Wolkenhauer and
Dagmar Waltemath},
title = {Combining computational models, semantic annotations and simulation
experiments in a graph database},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bau130},
doi = {10.1093/DATABASE/BAU130},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/HenkelWW15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/HuaXYBICZS15,
author = {Juan Hua and
Bo Xu and
Yifan Yang and
Rongjun Ban and
Furhan Iqbal and
Howard J. Cooke and
Yuanwei Zhang and
Qinghua Shi},
title = {Follicle Online: an integrated database of follicle assembly, development
and ovulation},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav036},
doi = {10.1093/DATABASE/BAV036},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/HuaXYBICZS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/IquebalJASAKRK15,
author = {Mir Asif Iquebal and
Sarika Jaiswal and
Ulavappa B. Angadi and
Gaurav Sablok and
Vasu Arora and
Sunil Kumar and
Anil Rai and
Dinesh Kumar},
title = {SBMDb: first whole genome putative microsatellite {DNA} marker database
of sugarbeet for bioenergy and industrial applications},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav111},
doi = {10.1093/DATABASE/BAV111},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/IquebalJASAKRK15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/JuhaszHM15,
author = {Ang{\'{e}}la Juh{\'{a}}sz and
R{\'{e}}ka Haraszi and
Csaba Maulis},
title = {ProPepper: a curated database for identification and analysis of peptide
and immune-responsive epitope composition of cereal grain protein
families},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav100},
doi = {10.1093/DATABASE/BAV100},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/JuhaszHM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/KamdarD15,
author = {Maulik R. Kamdar and
Michel Dumontier},
title = {An Ebola virus-centered knowledge base},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav049},
doi = {10.1093/DATABASE/BAV049},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/KamdarD15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/KangLLP15,
author = {Kang Kang and
Jun Li and
Boon Leong Lim and
Gianni Panagiotou},
title = {{MESSI:} metabolic engineering target selection and best strain identification
tool},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav076},
doi = {10.1093/DATABASE/BAV076},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/KangLLP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/KaurTGK15,
author = {Karambir Kaur and
Himani Tandon and
Amit Kumar Gupta and
Manoj Kumar},
title = {CrisprGE: a central hub of CRISPR/Cas-based genome editing},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav055},
doi = {10.1093/DATABASE/BAV055},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/KaurTGK15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/KhareBATCHL15,
author = {Ritu Khare and
John D. Burger and
John S. Aberdeen and
David Tresner{-}Kirsch and
Theodore J. Corrales and
Lynette Hirschman and
Zhiyong Lu},
title = {Scaling drug indication curation through crowdsourcing},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav016},
doi = {10.1093/DATABASE/BAV016},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/KhareBATCHL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/KhaterM15,
author = {Shradha Khater and
Debasisa Mohanty},
title = {novPTMenzy: a database for enzymes involved in novel post-translational
modifications},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav039},
doi = {10.1093/DATABASE/BAV039},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/KhaterM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/KilianHPMGSMBB15,
author = {Norbert Kilian and
Tilo Henning and
Patrick Plitzner and
Andreas M{\"{u}}ller and
Anton G{\"{u}}ntsch and
Ben C. St{\"{o}}ver and
Kai F. M{\"{u}}ller and
Walter G. Berendsohn and
Thomas Borsch},
title = {Sample data processing in an additive and reproducible taxonomic workflow
by using character data persistently linked to preserved individual
specimens},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav094},
doi = {10.1093/DATABASE/BAV094},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/KilianHPMGSMBB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/KimSSL15,
author = {Hanhae Kim and
Jung Eun Shim and
Junha Shin and
Insuk Lee},
title = {EcoliNet: a database of cofunctional gene network for \emph{Escherichia
coli}},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav001},
doi = {10.1093/DATABASE/BAV001},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/KimSSL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/KorlaCHTLKHCN15,
author = {Praveen Kumar Korla and
Jack Cheng and
Chien{-}Hung Huang and
Jeffrey J. P. Tsai and
Yu{-}Hsuan Liu and
Nilubon Kurubanjerdjit and
Wen{-}Tsong Hsieh and
Huey{-}Yi Chen and
Ka{-}Lok Ng},
title = {{FARE-CAFE:} a database of functional and regulatory elements of cancer-associated
fusion events},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav086},
doi = {10.1093/DATABASE/BAV086},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/KorlaCHTLKHCN15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/KumarCSKTB15,
author = {Anil Kumar and
Hasnahana Chetia and
Swagata Sharma and
Debajyoti Kabiraj and
Narayan Chandra Talukdar and
Utpal Bora},
title = {Curcumin Resource Database},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav070},
doi = {10.1093/DATABASE/BAV070},
timestamp = {Thu, 07 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/KumarCSKTB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LeeYHKKPHHK15,
author = {Ji{-}Hyun Lee and
Sungyong You and
Do Young Hyeon and
Byeongsoo Kang and
Hyerim Kim and
Kyoung Mii Park and
Byungwoo Han and
Daehee Hwang and
Sunghoon Kim},
title = {Comprehensive data resources and analytical tools for pathological
association of aminoacyl tRNA synthetases with cancer},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav022},
doi = {10.1093/DATABASE/BAV022},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LeeYHKKPHHK15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LeonPGP15,
author = {Eduardo Andr{\'{e}}s Le{\'{o}}n and
Daniel Gonz{\'{a}}lez{-}Pe{\~{n}}a and
Gonzalo G{\'{o}}mez{-}L{\'{o}}pez and
David G. Pisano},
title = {miRGate: a curated database of human, mouse and rat miRNA-mRNA targets},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav035},
doi = {10.1093/DATABASE/BAV035},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LeonPGP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LiOG15,
author = {Hongdong Li and
Gilbert S. Omenn and
Yuanfang Guan},
title = {MIsoMine: a genome-scale high-resolution data portal of expression,
function and networks at the splice isoform level in the mouse},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav045},
doi = {10.1093/DATABASE/BAV045},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/LiOG15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LiuLHWNSPDS15,
author = {Weisong Liu and
Stanley J. F. Laulederkind and
G. Thomas Hayman and
Shur{-}Jen Wang and
Rajni Nigam and
Jennifer R. Smith and
Jeff de Pons and
Melinda R. Dwinell and
Mary Shimoyama},
title = {OntoMate: a text-mining tool aiding curation at the Rat Genome Database},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bau129},
doi = {10.1093/DATABASE/BAU129},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LiuLHWNSPDS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LiuWMW15,
author = {Zhi{-}Ping Liu and
Canglin Wu and
Hongyu Miao and
Hulin Wu},
title = {RegNetwork: an integrated database of transcriptional and post-transcriptional
regulatory networks in human and mouse},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav095},
doi = {10.1093/DATABASE/BAV095},
timestamp = {Tue, 09 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/LiuWMW15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LoharchBJGSP15,
author = {Saurabh Loharch and
Isha Bhutani and
Kamal Jain and
Pawan Gupta and
Debendra K. Sahoo and
Raman Parkesh},
title = {EpiDBase: a manually curated database for small molecule modulators
of epigenetic landscape},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav013},
doi = {10.1093/DATABASE/BAV013},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LoharchBJGSP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LopezNP15,
author = {Yosvany L{\'{o}}pez and
Kenta Nakai and
Ashwini Patil},
title = {HitPredict version 4: comprehensive reliability scoring of physical
protein-protein interactions from more than 100 species},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav117},
doi = {10.1093/DATABASE/BAV117},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LopezNP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LukGXLWTRCL15,
author = {Alfred Chun{-}Shui Luk and
Huayan Gao and
Sizhe Xiao and
Jinyue Liao and
Daxi Wang and
Jiajie Tu and
Owen M. Rennert and
Wai{-}Yee Chan and
Tin{-}Lap Lee},
title = {GermlncRNA: a unique catalogue of long non-coding RNAs and associated
regulations in male germ cell development},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav044},
doi = {10.1093/DATABASE/BAV044},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LukGXLWTRCL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LuoDXFLZX15,
author = {Zhenhua Luo and
Zhiming Dai and
Xiaowei Xie and
Xuyang Feng and
Dan Liu and
Songyang Zhou and
Yuanyan Xiong},
title = {TeloPIN: a database of telomeric proteins interaction network in mammalian
cells},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav018},
doi = {10.1093/DATABASE/BAV018},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LuoDXFLZX15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/MaLXH15,
author = {Bi Ma and
Tian Li and
Zhonghuai Xiang and
Ningjia He},
title = {MnTEdb, a collective resource for mulberry transposable elements},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav004},
doi = {10.1093/DATABASE/BAV004},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/MaLXH15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/MalladiEPRCDHHL15,
author = {Venkat S. Malladi and
Drew T. Erickson and
Nikhil R. Podduturi and
Laurence D. Rowe and
Esther T. Chan and
Jean M. Davidson and
Benjamin C. Hitz and
Marcus Ho and
Brian T. Lee and
Stuart R. Miyasato and
Greg R. Roe and
Matt Simison and
Cricket A. Sloan and
J. Seth Strattan and
Forrest Tanaka and
W. James Kent and
J. Michael Cherry and
Eurie L. Hong},
title = {Ontology application and use at the {ENCODE} {DCC}},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav010},
doi = {10.1093/DATABASE/BAV010},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/MalladiEPRCDHHL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/McIlroySANMHKNN15,
author = {Simon Jon McIlroy and
Aaron Marc Saunders and
Mads Albertsen and
Marta Nierychlo and
Bianca McIlroy and
Aviaja Anna Hansen and
S{\o}ren Michael Karst and
Jeppe Lund Nielsen and
Per Halkj{\ae}r Nielsen},
title = {MiDAS: the field guide to the microbes of activated sludge},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav062},
doi = {10.1093/DATABASE/BAV062},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/McIlroySANMHKNN15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/MedvedevaLEKVPK15,
author = {Yulia A. Medvedeva and
Andreas Lennartsson and
Rezvan Ehsani and
Ivan V. Kulakovskiy and
Ilya E. Vorontsov and
Pouda Panahandeh and
Grigory Khimulya and
Takeya Kasukawa and
Finn Drabl{\o}s},
title = {EpiFactors: a comprehensive database of human epigenetic factors and
complexes},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav067},
doi = {10.1093/DATABASE/BAV067},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/MedvedevaLEKVPK15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/MeinkenWCM15,
author = {John Meinken and
Gary Walker and
Chester R. Cooper and
Xiang Jia Min},
title = {MetazSecKB: the human and animal secretome and subcellular proteome
knowledgebase},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav077},
doi = {10.1093/DATABASE/BAV077},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/MeinkenWCM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/MeirellesGFMABP15,
author = {Pedro Milet Meirelles and
Luiz M. R. Gadelha Jr. and
Ronaldo Bastos Francini{-}Filho and
Rodrigo Le{\~{a}}o de Moura and
Gilberto Menezes Amado{-}Filho and
Alex Cardoso Bastos and
Rodolfo Pinheiro da Rocha Paranhos and
Carlos Eduardo Rezende and
Jean Swings and
Eduardo Siegle and
Nils Edvin Asp Neto and
Sigrid Neumann Leit{\~{a}}o and
Ricardo Coutinho and
Marta Mattoso and
Paulo S. Salomon and
Rog{\'{e}}rio A. B. Valle and
Renato Crespo Pereira and
Ricardo Henrique Kruger and
Cristiane Thompson and
Fabiano L. Thompson},
title = {BaMBa: towards the integrated management of Brazilian marine environmental
data},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav088},
doi = {10.1093/DATABASE/BAV088},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/MeirellesGFMABP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/MetriHRAROHSCBS15,
author = {Rahul Metri and
Sridhar Hariharaputran and
Gayatri Ramakrishnan and
Praveen Anand and
Upadhyayula S. Raghavender and
Bernardo Ochoa{-}Monta{\~{n}}o and
Alicia P. Higueruelo and
Ramanathan Sowdhamini and
Nagasuma R. Chandra and
Tom L. Blundell and
Narayanaswamy Srinivasan},
title = {SInCRe - structural interactome computational resource for \emph{Mycobacterium
tuberculosis}},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav060},
doi = {10.1093/DATABASE/BAV060},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/MetriHRAROHSCBS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/NanduriBSMPG15,
author = {Ravikanth Nanduri and
Isha Bhutani and
Arun Kumar Somavarapu and
Sahil Mahajan and
Raman Parkesh and
Pawan Gupta},
title = {{ONRLDB} - manually curated database of experimentally validated ligands
for orphan nuclear receptors: insights into new drug discovery},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav112},
doi = {10.1093/DATABASE/BAV112},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/NanduriBSMPG15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/NdhlovuDH15,
author = {Andrew Ndhlovu and
Pierre M. Durand and
Scott Hazelhurst},
title = {EvoDB: a database of evolutionary rate profiles, associated protein
domains and phylogenetic trees for {PFAM-A}},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav065},
doi = {10.1093/DATABASE/BAV065},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/NdhlovuDH15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/NegiPSMG15,
author = {Simarjeet Negi and
Sanjit Pandey and
Satish Mahadevan Srinivasan and
Akram Mohammed and
Chittibabu Guda},
title = {LocSigDB: a database of protein localization signals},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav003},
doi = {10.1093/DATABASE/BAV003},
timestamp = {Wed, 12 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/NegiPSMG15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/NguyenVGAC15,
author = {Tien Dung Nguyen and
Oriol Vidal{-}Cortes and
{\'{O}}scar Gallardo and
Joaquin Abian and
Montserrat Carrascal},
title = {LymPHOS 2.0: an update of a phosphosite database of primary human
{T} cells},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav115},
doi = {10.1093/DATABASE/BAV115},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/NguyenVGAC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/NickchiJK15,
author = {Payman Nickchi and
Mohieddin Jafari and
Shiva Kalantari},
title = {{PEIMAN} 1.0: Post-translational modification Enrichment, Integration
and Matching ANalysis},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav037},
doi = {10.1093/DATABASE/BAV037},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/NickchiJK15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/NicolaBHG15,
author = {George Nicola and
Michael R. Berthold and
Michael P. Hedrick and
Michael K. Gilson},
title = {Connecting proteins with drug-like compounds: Open source drug discovery
workflows with BindingDB and {KNIME}},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav087},
doi = {10.1093/DATABASE/BAV087},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/NicolaBHG15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/Ochoa-MontanoMB15,
author = {Bernardo Ochoa{-}Monta{\~{n}}o and
Nishita Mohan and
Tom L. Blundell},
title = {{CHOPIN:} a web resource for the structural and functional proteome
of \emph{Mycobacterium tuberculosis}},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav026},
doi = {10.1093/DATABASE/BAV026},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/Ochoa-MontanoMB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/OliveiraASGAVAF15,
author = {Jorge S. Oliveira and
Wydemberg Ara{\'{u}}jo and
Ana Isabela Lopes Sales and
Alaine de Brito Guerra and
Sinara Carla da Silva Ara{\'{u}}jo and
Ana Tereza Ribeiro de Vasconcelos and
Lucymara F. Agnez{-}Lima and
Ana Teresa Freitas},
title = {BioSurfDB: knowledge and algorithms to support biosurfactants and
biodegradation studies},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav033},
doi = {10.1093/DATABASE/BAV033},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/OliveiraASGAVAF15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/OppermannWDK15,
author = {Markus Oppermann and
Stephan Weise and
Claudia Dittmann and
Helmut Kn{\"{u}}pffer},
title = {{GBIS:} the information system of the German Genebank},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav021},
doi = {10.1093/DATABASE/BAV021},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/OppermannWDK15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/OrchardH15,
author = {Sandra E. Orchard and
Henning Hermjakob},
title = {Shared resources, shared costs - leveraging biocuration resources},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav009},
doi = {10.1093/DATABASE/BAV009},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/OrchardH15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/OrsiBWB15,
author = {Renato H. Orsi and
Teresa M. Bergholz and
Martin Wiedmann and
Kathryn J. Boor},
title = {The \emph{Listeria monocytogenes} strain 10403S BioCyc database},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav027},
doi = {10.1093/DATABASE/BAV027},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/OrsiBWB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PalmaVHRT15,
author = {Guillermo Palma and
Maria{-}Esther Vidal and
Eric Haag and
Louiqa Raschid and
Andreas Thor},
title = {Determining similarity of scientific entities in annotation datasets},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bau123},
doi = {10.1093/DATABASE/BAU123},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/PalmaVHRT15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PanWZWURLX15,
author = {Zhicheng Pan and
Bangshan Wang and
Ying Zhang and
Yongbo Wang and
Shahid Ullah and
Jian Ren and
Zexian Liu and
Yu Xue},
title = {dbPSP: a curated database for protein phosphorylation sites in prokaryotes},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav031},
doi = {10.1093/DATABASE/BAV031},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/PanWZWURLX15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PangSSHCHBKJVSS15,
author = {Chao Pang and
Annet Sollie and
Anna Sijtsma and
Dennis Hendriksen and
Bart Charbon and
Mark de Haan and
Tommy de Boer and
Fleur D. L. Kelpin and
Jonathan Jetten and
K. Joeri van der Velde and
Nynke Smidt and
Rolf Sijmons and
Hans L. Hillege and
Morris A. Swertz},
title = {{SORTA:} a system for ontology-based re-coding and technical annotation
of biomedical phenotype data},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav089},
doi = {10.1093/DATABASE/BAV089},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/PangSSHCHBKJVSS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PathaniaRB15,
author = {Shivalika Pathania and
Sai Mukund Ramakrishnan and
Ganesh Bagler},
title = {Phytochemica: a platform to explore phytochemicals of medicinal plants},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav075},
doi = {10.1093/DATABASE/BAV075},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/PathaniaRB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PetrilloAHBPK15,
author = {Mauro Petrillo and
Alexandre Angers{-}Loustau and
Peter Henriksson and
Laura Bonfini and
Alexandre Patak and
Joachim Kreysa},
title = {{JRC} GMO-Amplicons: a collection of nucleic acid sequences related
to genetically modified organisms},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav101},
doi = {10.1093/DATABASE/BAV101},
timestamp = {Sat, 27 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/PetrilloAHBPK15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PierneefCBR15,
author = {Rian Pierneef and
Louis Cronje and
Oliver Bezuidt and
Oleg N. Reva},
title = {Pre{\_}GI: a global map of ontological links between horizontally
transferred genomic islands in bacterial and archaeal genomes},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav058},
doi = {10.1093/DATABASE/BAV058},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/PierneefCBR15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PineroQBDBBSF15,
author = {Janet Pi{\~{n}}ero Gonz{\'{a}}lez and
N{\'{u}}ria Queralt{-}Rosinach and
{\`{A}}lex Bravo and
Jordi Deu{-}Pons and
Anna Bauer{-}Mehren and
Martin Baron and
Ferran Sanz and
Laura In{\'{e}}s Furlong},
title = {DisGeNET: a discovery platform for the dynamical exploration of human
diseases and their genes},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav028},
doi = {10.1093/DATABASE/BAV028},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/PineroQBDBBSF15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PornputtapongNN15,
author = {Natapol Pornputtapong and
Intawat Nookaew and
Jens Nielsen},
title = {Human metabolic atlas: an online resource for human metabolism},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav068},
doi = {10.1093/DATABASE/BAV068},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/PornputtapongNN15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PriviteraDWFPG15,
author = {Anna P. Privitera and
Rosario Distefano and
Hugo A. Wefer and
Alfredo Ferro and
Alfredo Pulvirenti and
Rosalba Giugno},
title = {{OCDB:} a database collecting genes, miRNAs and drugs for obsessive-compulsive
disorder},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav069},
doi = {10.1093/DATABASE/BAV069},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/PriviteraDWFPG15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/RajuGGGASPG15,
author = {Rajesh Raju and
Sachin Gadakh and
Priyanka Gopal and
Bijesh George and
Jayshree Advani and
Sowmya Soman and
T. S. Keshava Prasad and
Reshmi Girijadevi},
title = {Differential ligand-signaling network of {CCL19/CCL21-CCR7} system},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav106},
doi = {10.1093/DATABASE/BAV106},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/RajuGGGASPG15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/RappoportL15,
author = {Nadav Rappoport and
Michal Linial},
title = {ProtoBug: functional families from the complete proteomes of insects},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bau122},
doi = {10.1093/DATABASE/BAU122},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/RappoportL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/Reyes-PrietoVLM15,
author = {Mariana Reyes{-}Prieto and
Carlos Vargas{-}Ch{\'{a}}vez and
Amparo Latorre and
Andr{\'{e}}s Moya},
title = {SymbioGenomesDB: a database for the integration and access to knowledge
on host-symbiont relationships},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav109},
doi = {10.1093/DATABASE/BAV109},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/Reyes-PrietoVLM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/RheeCSSMKG15,
author = {David B. Rhee and
Matthew McKnight Croken and
Kevin R. Shieh and
Julie M. Sullivan and
Gos Micklem and
Kami Kim and
Aaron Golden},
title = {toxoMine: an integrated omics data warehouse for \emph{Toxoplasma
gondii} systems biology research},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav066},
doi = {10.1093/DATABASE/BAV066},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/RheeCSSMKG15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/RichardsonGMBRA15,
author = {Lorna J. Richardson and
Liz Graham and
Julie Moss and
Nick Burton and
Yogmatee Roochun and
Chris Armit and
Richard A. Baldock},
title = {Developing the eHistology Atlas},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav105},
doi = {10.1093/DATABASE/BAV105},
timestamp = {Mon, 26 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/RichardsonGMBRA15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/Rocca-SerraWPGZ15,
author = {Philippe Rocca{-}Serra and
Ramona L. Walls and
Jacob Parnell and
Rachel Gallery and
Jie Zheng and
Susanna{-}Assunta Sansone and
Alejandra N. Gonz{\'{a}}lez{-}Beltr{\'{a}}n},
title = {Modeling a microbial community and biodiversity assay with {OBO} Foundry
ontologies: the interoperability gains of a modular approach},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bau132},
doi = {10.1093/DATABASE/BAU132},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/Rocca-SerraWPGZ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/Rodriguez-Esteban15,
author = {Raul Rodriguez{-}Esteban},
title = {Biocuration with insufficient resources and fixed timelines},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav116},
doi = {10.1093/DATABASE/BAV116},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/Rodriguez-Esteban15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/SablokRMPSBYRP15,
author = {Gaurav Sablok and
G. V. Padma Raju and
Suresh B. Mudunuri and
Ratna Prabha and
Dhananjaya P. Singh and
Vesselin Baev and
Galina Yahubyan and
Peter J. Ralph and
Nicola La Porta},
title = {ChloroMitoSSRDB 2.00: more genomes, more repeats, unifying SSRs search
patterns and on-the-fly repeat detection},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav084},
doi = {10.1093/DATABASE/BAV084},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/SablokRMPSBYRP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/SarkarJS15,
author = {Debasree Sarkar and
Tanmoy Jana and
Sudipto Saha},
title = {{LMPID:} {A} manually curated database of linear motifs mediating
protein-protein interactions},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav014},
doi = {10.1093/DATABASE/BAV014},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/SarkarJS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ShenSKC15,
author = {Jun Shen and
D{\'{e}}borah I. Scheffer and
Kelvin Y. Kwan and
David P. Corey},
title = {{SHIELD:} an integrative gene expression database for inner ear research},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav071},
doi = {10.1093/DATABASE/BAV071},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ShenSKC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/SmithV15,
author = {Timothy D. Smith and
Mauno Vihinen},
title = {Standard development at the Human Variome Project},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav024},
doi = {10.1093/DATABASE/BAV024},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/SmithV15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/StrasserMNWWAMK15,
author = {Kimchi Strasser and
Erin McDonnell and
Carol Nyaga and
Min Wu and
Sherry Wu and
Hayda Almeida and
Marie{-}Jean Meurs and
Leila Kosseim and
Justin Powlowski and
Gregory Butler and
Adrian Tsang},
title = {mycoCLAP, the database for characterized lignocellulose-active proteins
of fungal origin: resource and text mining curation support},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav008},
doi = {10.1093/DATABASE/BAV008},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/StrasserMNWWAMK15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/SzostakAMFTILHP15,
author = {Justyna Szostak and
Sam Ansari and
Sumit Madan and
Juliane Fluck and
Marja Talikka and
Anita Iskandar and
Hector De Leon and
Martin Hofmann{-}Apitius and
Manuel C. Peitsch and
Julia Hoeng},
title = {Construction of biological networks from unstructured information
based on a semi-automated curation workflow},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav057},
doi = {10.1093/DATABASE/BAV057},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/SzostakAMFTILHP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/TaboadaRHPS15,
author = {Maria Taboada and
Hadriana Rodr{\'{\i}}guez and
Diego Mart{\'{\i}}nez Hern{\'{a}}ndez and
Mar{\'{\i}}a Pardo and
Mar{\'{\i}}a Jes{\'{u}}s Sobrido},
title = {Automated semantic annotation of rare disease cases: a case study},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav107},
doi = {10.1093/DATABASE/BAV107},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/TaboadaRHPS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/TaoSZCX15,
author = {Cui Tao and
Jingchun Sun and
W. Jim Zheng and
Junjie Chen and
Hua Xu},
title = {Colorectal cancer drug target prediction using ontology-based inference
and network analysis},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav015},
doi = {10.1093/DATABASE/BAV015},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/TaoSZCX15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ThangamG15,
author = {Manonanthini Thangam and
Ramesh Kumar Gopal},
title = {{CRCDA} - Comprehensive resources for cancer {NGS} data analysis},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav092},
doi = {10.1093/DATABASE/BAV092},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ThangamG15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/TudorRLVWA15,
author = {Catalina O. Tudor and
Karen E. Ross and
Gang Li and
K. Vijay{-}Shanker and
Cathy H. Wu and
Cecilia N. Arighi},
title = {Construction of phosphorylation interaction networks by text mining
of full-length articles using the eFIP system},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav020},
doi = {10.1093/DATABASE/BAV020},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/TudorRLVWA15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/VandepitteBTWVH15,
author = {Leen Vandepitte and
Samuel Bosch and
Lennert Tyberghein and
Filip Waumans and
Bart Vanhoorne and
Francisco Hernandez and
Olivier De Clerck and
Jan Mees},
title = {Fishing for data and sorting the catch: assessing the data quality,
completeness and fitness for use of data in marine biogeographic databases},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bau125},
doi = {10.1093/DATABASE/BAU125},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/VandepitteBTWVH15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/VillavecesJPdDD15,
author = {Jose M. Villaveces and
Rafael C. Jim{\'{e}}nez and
Pablo Porras and
Noemi del{-}Toro and
Margaret J. Duesbury and
Marine Dumousseau and
Sandra E. Orchard and
H. Choi and
Peipei Ping and
N. C. Zong and
Manor Askenazi and
Bianca Habermann and
Henning Hermjakob},
title = {Merging and scoring molecular interactions utilising existing community
standards: tools, use-cases and a case study},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bau131},
doi = {10.1093/DATABASE/BAU131},
timestamp = {Thu, 25 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/VillavecesJPdDD15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WanDFGPWYZM15,
author = {Quan Wan and
Hayley Dingerdissen and
Yu Fan and
Naila Gulzar and
Yang Pan and
Tsung{-}Jung Wu and
Cheng Yan and
Haichen Zhang and
Raja Mazumder},
title = {BioXpress: an integrated RNA-seq-derived gene expression database
for pan-cancer analysis},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav019},
doi = {10.1093/DATABASE/BAV019},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/WanDFGPWYZM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WangDDYXY15,
author = {Kun Wang and
Jiao Deng and
Rebecca Njeri Damaris and
Mei Yang and
Liming Xu and
Pingfang Yang},
title = {{LOTUS-DB:} an integrative and interactive database for \emph{Nelumbo
nucifera} study},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav023},
doi = {10.1093/DATABASE/BAV023},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/WangDDYXY15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WangJCHBC15,
author = {Fei Wang and
Lichun Jiang and
Yong Chen and
Nele A. Haelterman and
Hugo J. Bellen and
Rui Chen},
title = {FlyVar: a database for genetic variation in \emph{Drosophila melanogaster}},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav079},
doi = {10.1093/DATABASE/BAV079},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/WangJCHBC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WangLHPLSNDS15,
author = {Shur{-}Jen Wang and
Stanley J. F. Laulederkind and
G. Thomas Hayman and
Victoria Petri and
Weisong Liu and
Jennifer R. Smith and
Rajni Nigam and
Melinda R. Dwinell and
Mary Shimoyama},
title = {PhenoMiner: a quantitative phenotype database for the laboratory rat,
\emph{Rattus norvegicus}. Application in hypertension and renal disease},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bau128},
doi = {10.1093/DATABASE/BAU128},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/WangLHPLSNDS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WangWLCW15,
author = {Xiaobo Wang and
Jian Wu and
Jianli Liang and
Feng Cheng and
Xiaowu Wang},
title = {Brassica database {(BRAD)} version 2.0: integrating and mining Brassicaceae
species genomic resources},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav093},
doi = {10.1093/DATABASE/BAV093},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/WangWLCW15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WangWYJWXX15,
author = {Yan Wang and
Mingxia Wang and
Sanwen Yin and
Richard Jang and
Jian Wang and
Zhidong Xue and
Tao Xu},
title = {NeuroPep: a comprehensive resource of neuropeptides},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav038},
doi = {10.1093/DATABASE/BAV038},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/WangWYJWXX15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WangZZLZGGNL15,
author = {Peng Wang and
Hui Zhi and
Yunpeng Zhang and
Yue Liu and
Jizhou Zhang and
Yue Gao and
Maoni Guo and
Shangwei Ning and
Xia Li},
title = {miRSponge: a manually curated database for experimentally supported
miRNA sponges and ceRNAs},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav098},
doi = {10.1093/DATABASE/BAV098},
timestamp = {Mon, 22 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/WangZZLZGGNL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WilmingBH15,
author = {Laurens G. Wilming and
Veronika Boychenko and
Jennifer L. Harrow},
title = {Comprehensive comparative homeobox gene annotation in human and mouse},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav091},
doi = {10.1093/DATABASE/BAV091},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/WilmingBH15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WuSCCCFHKKMMPSS15,
author = {Tsung{-}Jung Wu and
Lynn M. Schriml and
Qingrong Chen and
Maureen Colbert and
Daniel J. Crichton and
Richard P. Finney and
Ying Hu and
Warren A. Kibbe and
Heather Kincaid and
Daoud M. Meerzaman and
Elvira Mitraka and
Yang Pan and
Krista Smith and
Sudhir Srivastava and
Sari Ward and
Cheng Yan and
Raja Mazumder},
title = {Generating a focused view of disease ontology cancer terms for pan-cancer
data integration and analysis},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav032},
doi = {10.1093/DATABASE/BAV032},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/WuSCCCFHKKMMPSS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/YangFLGZ15,
author = {Yaohua Yang and
Jie Feng and
Tao Li and
Feng Ge and
Jindong Zhao},
title = {CyanOmics: an integrated database of omics for the model cyanobacterium
\emph{Synechococcus} sp. {PCC} 7002},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bau127},
doi = {10.1093/DATABASE/BAU127},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/YangFLGZ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/YuKTSLH15,
author = {Jingyin Yu and
Tao Ke and
Sadia Tehrim and
Fengming Sun and
Boshou Liao and
Wei Hua},
title = {PTGBase: an integrated database to study tandem duplicated genes in
plants},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav017},
doi = {10.1093/DATABASE/BAV017},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/YuKTSLH15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/YueLBTDFL15,
author = {Junyang Yue and
Jian Liu and
Rongjun Ban and
Wei Tang and
Lin Deng and
Zhangjun Fei and
Yongsheng Liu},
title = {Kiwifruit Information Resource {(KIR):} a comparative platform for
kiwifruit genomics},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav113},
doi = {10.1093/DATABASE/BAV113},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/YueLBTDFL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/YueMBHWLL15,
author = {Junyang Yue and
Xiaojing Ma and
Rongjun Ban and
Qianli Huang and
Wenjie Wang and
Jia Liu and
Yongsheng Liu},
title = {{FR} database 1.0: a resource focused on fruit development and ripening},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav002},
doi = {10.1093/DATABASE/BAV002},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/YueMBHWLL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ZengQC15,
author = {Hui Zeng and
Chengxiang Qiu and
Qinghua Cui},
title = {Drug-Path: a database for drug-induced pathways},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav061},
doi = {10.1093/DATABASE/BAV061},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ZengQC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ZhangGYYLXHS15,
author = {Liwei Zhang and
Jinyan Guo and
Qi You and
Xin Yi and
Yi Ling and
Wenying Xu and
Jinping Hua and
Zhen Su},
title = {GraP: platform for functional genomics analysis of \emph{Gossypium
raimondii}},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav047},
doi = {10.1093/DATABASE/BAV047},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ZhangGYYLXHS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ZhangGZKLSDC15,
author = {Wei Zhang and
Eric R. Gamazon and
Xu Zhang and
Anuar Konkashbaev and
Cong Liu and
Keely L. Szil{\'{a}}gyi and
M. Eileen Dolan and
Nancy J. Cox},
title = {{SCAN} database: facilitating integrative analyses of cytosine modification
and expression {QTL}},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav025},
doi = {10.1093/DATABASE/BAV025},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ZhangGZKLSDC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ZhangZZZX15,
author = {Di Zhang and
Rongrong Zhu and
Hanqian Zhang and
Chun{-}Hou Zheng and
Junfeng Xia},
title = {{MGDB:} a comprehensive database of genes involved in melanoma},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav097},
doi = {10.1093/DATABASE/BAV097},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ZhangZZZX15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ZhaoBWWZWLXL15,
author = {Zheng Zhao and
Jing Bai and
Aiwei Wu and
Yuan Wang and
Jinwen Zhang and
Zishan Wang and
Yongsheng Li and
Juan Xu and
Xia Li},
title = {Co-LncRNA: investigating the lncRNA combinatorial effects in {GO}
annotations and {KEGG} pathways based on human RNA-Seq data},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav082},
doi = {10.1093/DATABASE/BAV082},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/ZhaoBWWZWLXL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ZhengLH15,
author = {Yiyu Zheng and
Xiaoman Li and
Haiyan Hu},
title = {PreDREM: a database of predicted {DNA} regulatory motifs from 349
human cell and tissue samples},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav007},
doi = {10.1093/DATABASE/BAV007},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ZhengLH15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ZhouSKL15,
author = {Zhong Zhou and
Yi Shen and
Muhammad Riaz Khan and
Ao Li},
title = {LncReg: a reference resource for lncRNA-associated regulatory networks},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav083},
doi = {10.1093/DATABASE/BAV083},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ZhouSKL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ZhouYMZ15,
author = {Yuan Zhou and
Shiping Yang and
Tonglin Mao and
Ziding Zhang},
title = {MAPanalyzer: a novel online tool for analyzing microtubule-associated
proteins},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav108},
doi = {10.1093/DATABASE/BAV108},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ZhouYMZ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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