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@inproceedings{DBLP:conf/gcb/Arndt04, author = {Peter F. Arndt}, editor = {Robert Giegerich and Jens Stoye}, title = {Identification and Measurement of Neigbor Dependent Nucleotide Substitution Processes}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {227--234}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28670}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/Arndt04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/BeckstetteSHGK04, author = {Michael Beckstette and Dirk Strothmann and Robert Homann and Robert Giegerich and Stefan Kurtz}, editor = {Robert Giegerich and Jens Stoye}, title = {\emph{PoSSuMsearch}: Fast and Sensitive Matching of Position Specific Scoring Matrices using Enhanced Suffix Arrays}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {53--64}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28676}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/BeckstetteSHGK04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/BeckstetteSS04, author = {Michael Beckstette and Alexander Sczyrba and Paul M. Selzer}, editor = {Robert Giegerich and Jens Stoye}, title = {Genlight: An Interactive System for High-throughput Sequence Analysis and Comparative Genomics}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {179--185}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28664}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/BeckstetteSS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/Bocker04, author = {Sebastian B{\"{o}}cker}, editor = {Robert Giegerich and Jens Stoye}, title = {Weighted Sequencing from Compomers: {DNA} de-novo sequencing from mass spectrometry data in the presence of false negative constraints}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {13--23}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28672}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/Bocker04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/BosCLSP04, author = {Fabian B{\"{o}}s and Natalia Currle{-}Linde and Peggy Lindner and Rolf D. Schmid and J{\"{u}}rgen Pleiss}, editor = {Robert Giegerich and Jens Stoye}, title = {High-throughput molecular dynamics simulations: Long and short range effects of mutations on substrate specificity}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {123--130}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28656}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/BosCLSP04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/DelfsDKS04, author = {Ralph Delfs and Andreas Doms and Alexander Kozlenkov and Michael Schroeder}, editor = {Robert Giegerich and Jens Stoye}, title = {GoPubMed: ontology-based literature search applied to Gene Ontology and PubMed}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {169--178}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28663}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/DelfsDKS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/Delgado-FriedrichsHLRSH04, author = {Olaf Delgado{-}Friedrichs and Aaron L. Halpern and Ross Lippert and Christian Rausch and Stephan C. Schuster and Daniel H. Huson}, editor = {Robert Giegerich and Jens Stoye}, title = {Syntenic Layout of Two Assemblies of Related Genomes}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {3--12}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28661}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/Delgado-FriedrichsHLRSH04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/DieterichKSHR04, author = {Guido Dieterich and Marsel Kvesic and Dietmar Schomburg and Dirk W. Heinz and Joachim Reichelt}, editor = {Robert Giegerich and Jens Stoye}, title = {Integrating public databases into an existing protein visualization and modeling program - {BRAGI}}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {149--155}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28659}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/DieterichKSHR04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/Gagen04, author = {Michael J. Gagen}, editor = {Robert Giegerich and Jens Stoye}, title = {Invited Talk: Inherent Size and Complexity Constraints in Prokaryote Gene Regulatory Networks}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {157}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28660}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/Gagen04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/GewehrOZ04, author = {Jan E. Gewehr and Niklas von {\"{O}}hsen and Ralf Zimmer}, editor = {Robert Giegerich and Jens Stoye}, title = {Combining Secondary Structure Element Alignment and Profile-Profile Alignment for Fold Recognition}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {141--148}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28658}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/GewehrOZ04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/GotzBFLLLL04, author = {Thomas G{\"{o}}tz and Andreas Bohne{-}Lang and Martin Frank and Klaus Karl Lohmann and Alexander Lo{\ss} and Thomas L{\"{u}}tteke and Claus{-}Wilhelm von der Lieth}, editor = {Robert Giegerich and Jens Stoye}, title = {\emph{glycosciences.de: } An Internet Portal for Glyco-related Data from Open Access Resources}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {115--119}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28654}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/GotzBFLLLL04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/Gusfield04, author = {Dan Gusfield}, editor = {Robert Giegerich and Jens Stoye}, title = {Invited Talk: Phylogenetic Networks with Constrained and Unconstrained Recombination}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {1}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28650}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/Gusfield04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/IsermannWW04, author = {Nicole Isermann and Michael Weitzel and Wolfgang Wiechert}, editor = {Robert Giegerich and Jens Stoye}, title = {Kleene's Theorem and the Solution of Metabolic Carbon Labeling Systems}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {75--84}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28678}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/IsermannWW04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/KelVKTWKW04, author = {Alexander E. Kel and Nico Voss and Tatiana Konovalova and Dmitri Tchekmenev and P. Wabnitz and Olga V. Kel{-}Margoulis and Edgar Wingender}, editor = {Robert Giegerich and Jens Stoye}, title = {From Composite Patters to Pathways - Prediction of Key Regulators of Gene Expression}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {189--198}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28666}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/KelVKTWKW04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/KielbasaBH04, author = {Szymon M. Kielbasa and Nils Bl{\"{u}}thgen and Hanspeter Herzel}, editor = {Robert Giegerich and Jens Stoye}, title = {Genome-wide Analysis of Functions Regulated by Sets of Transcription Factors}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {105--113}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28653}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/KielbasaBH04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/KoschutzkiS04, author = {Dirk Kosch{\"{u}}tzki and Falk Schreiber}, editor = {Robert Giegerich and Jens Stoye}, title = {Comparison of Centralities for Biological Networks}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {199--206}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28667}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/KoschutzkiS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/MorgensternPWWSSS04, author = {Burkhard Morgenstern and Sonja J. Prohaska and Nadine Werner and Jan Weyer{-}Menkhoff and Isabelle Schneider and Amarendran Ramaswami Subramanian and Peter F. Stadler}, editor = {Robert Giegerich and Jens Stoye}, title = {Multiple sequence alignment with user-defined constraints}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {25--36}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28673}, timestamp = {Wed, 20 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/MorgensternPWWSSS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/PudimatSB04, author = {Rainer Pudimat and Ernst G{\"{u}}nter Schukat{-}Talamazzini and Rolf Backofen}, editor = {Robert Giegerich and Jens Stoye}, title = {Feature Based Representation and Detection of Transcription Factor Binding Sites}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {43--52}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28675}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/PudimatSB04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/ScholzGSS04, author = {Matthias Scholz and Yves Gibon and Mark Stitt and Joachim Selbig}, editor = {Robert Giegerich and Jens Stoye}, title = {Independent components analysis of starch deficient \emph{pgm} mutants}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {95--104}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28652}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/ScholzGSS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/Schubert04, author = {Walter Schubert}, editor = {Robert Giegerich and Jens Stoye}, title = {Invited Talk: Fast Track to Disease-Specific Drugs? The Impact of In-Situ Proteomics Imaging (Toponomics)}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {187--188}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28665}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/Schubert04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/SlackHMJ04, author = {James Slack and Kristian Hildebrand and Tamara Munzner and Katherine St. John}, editor = {Robert Giegerich and Jens Stoye}, title = {SequenceJuxtaposer: Fluid Navigation For Large-Scale Sequence Comparison in Context}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {37--41}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28674}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/SlackHMJ04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/StrombergssonPMWK04, author = {Helena Str{\"{o}}mbergsson and Peteris Prusis and Herman Midelfart and Jarl E. S. Wikberg and Henryk Jan Komorowski}, editor = {Robert Giegerich and Jens Stoye}, title = {Proteochemometrics Modeling of Receptor-Ligand Interactions Using Rough Sets}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {85--94}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28651}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/StrombergssonPMWK04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/TaubigBG04, author = {Hanjo T{\"{a}}ubig and Arno Buchner and Jan Griebsch}, editor = {Robert Giegerich and Jens Stoye}, title = {A Method for Fast Approximate Searching of Polypeptide Structures in the {PDB}}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {65--74}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28677}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/TaubigBG04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/ThurnerHS04, author = {C. Thurner and Ivo L. Hofacker and Peter F. Stadler}, editor = {Robert Giegerich and Jens Stoye}, title = {Conserved {RNA} Pseudoknots}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {207--216}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28668}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/ThurnerHS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/Vriend04, author = {Gert Vriend}, editor = {Robert Giegerich and Jens Stoye}, title = {Invited Talk: Information Flux Through Proteins}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {121--122}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28655}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/Vriend04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/WangB04, author = {Huiquan Wang and Craig J. Benham}, editor = {Robert Giegerich and Jens Stoye}, title = {Superhelically Destabilized Sites in the E. coli Genome: Implications for Promoter Prediction in Prokaryotes}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {217--226}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28669}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/WangB04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/WeskampHKK04, author = {Nils Weskamp and Eyke H{\"{u}}llermeier and Daniel Kuhn and Gerhard Klebe}, editor = {Robert Giegerich and Jens Stoye}, title = {Graph Alignments: {A} New Concept to Detect Conserved Regions in Protein Active Sites}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, pages = {131--140}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28657}, timestamp = {Tue, 04 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gcb/WeskampHKK04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/gcb/2004, editor = {Robert Giegerich and Jens Stoye}, title = {Proceedings of the German Conference on Bioinformatics {(GCB} 2004), Bielefeld, Germany, October 4-6, 2004}, series = {{LNI}}, volume = {{P-53}}, publisher = {{GI}}, year = {2004}, url = {https://dl.gi.de/handle/20.500.12116/28649}, isbn = {3-88579-382-2}, timestamp = {Tue, 12 Jan 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/gcb/2004.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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