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@inproceedings{DBLP:conf/alcob/AlthausHH14,
author = {Ernst Althaus and
Andreas Hildebrandt and
Anna Katharina Hildebrandt},
editor = {Adrian{-}Horia Dediu and
Carlos Mart{\'{\i}}n{-}Vide and
Bianca Truthe},
title = {A Greedy Algorithm for Hierarchical Complete Linkage Clustering},
booktitle = {Algorithms for Computational Biology - First International Conference,
AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns},
series = {Lecture Notes in Computer Science},
volume = {8542},
pages = {25--34},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-07953-0\_2},
doi = {10.1007/978-3-319-07953-0\_2},
timestamp = {Mon, 16 Sep 2019 15:22:41 +0200},
biburl = {https://dblp.org/rec/conf/alcob/AlthausHH14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/ArrudaDD14,
author = {Thiago da Silva Arruda and
Ulisses Dias and
Zanoni Dias},
editor = {Adrian{-}Horia Dediu and
Carlos Mart{\'{\i}}n{-}Vide and
Bianca Truthe},
title = {Heuristics for the Sorting by Length-Weighted Inversions Problem on
Signed Permutations},
booktitle = {Algorithms for Computational Biology - First International Conference,
AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns},
series = {Lecture Notes in Computer Science},
volume = {8542},
pages = {59--70},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-07953-0\_5},
doi = {10.1007/978-3-319-07953-0\_5},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/alcob/ArrudaDD14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/ChateauG14,
author = {Annie Chateau and
Rodolphe Giroudeau},
editor = {Adrian{-}Horia Dediu and
Carlos Mart{\'{\i}}n{-}Vide and
Bianca Truthe},
title = {Complexity and Polynomial-Time Approximation Algorithms around the
Scaffolding Problem},
booktitle = {Algorithms for Computational Biology - First International Conference,
AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns},
series = {Lecture Notes in Computer Science},
volume = {8542},
pages = {47--58},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-07953-0\_4},
doi = {10.1007/978-3-319-07953-0\_4},
timestamp = {Sun, 21 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/alcob/ChateauG14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/GalperinK14,
author = {Michael Y. Galperin and
Eugene V. Koonin},
editor = {Adrian{-}Horia Dediu and
Carlos Mart{\'{\i}}n{-}Vide and
Bianca Truthe},
title = {Comparative Genomics Approaches to Identifying Functionally Related
Genes},
booktitle = {Algorithms for Computational Biology - First International Conference,
AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns},
series = {Lecture Notes in Computer Science},
volume = {8542},
pages = {1--24},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-07953-0\_1},
doi = {10.1007/978-3-319-07953-0\_1},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/alcob/GalperinK14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/GrigorievKL14,
author = {Alexander Grigoriev and
Steven Kelk and
Nela Lekic},
editor = {Adrian{-}Horia Dediu and
Carlos Mart{\'{\i}}n{-}Vide and
Bianca Truthe},
title = {On Low Treewidth Graphs and Supertrees},
booktitle = {Algorithms for Computational Biology - First International Conference,
AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns},
series = {Lecture Notes in Computer Science},
volume = {8542},
pages = {71--82},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-07953-0\_6},
doi = {10.1007/978-3-319-07953-0\_6},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/alcob/GrigorievKL14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/HedtkeLMG14,
author = {Ivo Hedtke and
Ioana M. Lemnian and
Matthias M{\"{u}}ller{-}Hannemann and
Ivo Grosse},
editor = {Adrian{-}Horia Dediu and
Carlos Mart{\'{\i}}n{-}Vide and
Bianca Truthe},
title = {On Optimal Read Trimming in Next Generation Sequencing and Its Complexity},
booktitle = {Algorithms for Computational Biology - First International Conference,
AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns},
series = {Lecture Notes in Computer Science},
volume = {8542},
pages = {83--94},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-07953-0\_7},
doi = {10.1007/978-3-319-07953-0\_7},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/alcob/HedtkeLMG14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/IancuGAP14,
author = {Bogdan Iancu and
Diana{-}Elena Gratie and
Sepinoud Azimi and
Ion Petre},
editor = {Adrian{-}Horia Dediu and
Carlos Mart{\'{\i}}n{-}Vide and
Bianca Truthe},
title = {On the Implementation of Quantitative Model Refinement},
booktitle = {Algorithms for Computational Biology - First International Conference,
AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns},
series = {Lecture Notes in Computer Science},
volume = {8542},
pages = {95--106},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-07953-0\_8},
doi = {10.1007/978-3-319-07953-0\_8},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/alcob/IancuGAP14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/KojimaNMYSKN14,
author = {Kaname Kojima and
Naoki Nariai and
Takahiro Mimori and
Yumi Yamaguchi{-}Kabata and
Yukuto Sato and
Yosuke Kawai and
Masao Nagasaki},
editor = {Adrian{-}Horia Dediu and
Carlos Mart{\'{\i}}n{-}Vide and
Bianca Truthe},
title = {HapMonster: {A} Statistically Unified Approach for Variant Calling
and Haplotyping Based on Phase-Informative Reads},
booktitle = {Algorithms for Computational Biology - First International Conference,
AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns},
series = {Lecture Notes in Computer Science},
volume = {8542},
pages = {107--118},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-07953-0\_9},
doi = {10.1007/978-3-319-07953-0\_9},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/alcob/KojimaNMYSKN14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/LemaitreCP14,
author = {Claire Lemaitre and
Liviu Ciortuz and
Pierre Peterlongo},
editor = {Adrian{-}Horia Dediu and
Carlos Mart{\'{\i}}n{-}Vide and
Bianca Truthe},
title = {Mapping-Free and Assembly-Free Discovery of Inversion Breakpoints
from Raw {NGS} Reads},
booktitle = {Algorithms for Computational Biology - First International Conference,
AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns},
series = {Lecture Notes in Computer Science},
volume = {8542},
pages = {119--130},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-07953-0\_10},
doi = {10.1007/978-3-319-07953-0\_10},
timestamp = {Sun, 21 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/alcob/LemaitreCP14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/LemarchandELS14,
author = {Laurent Lemarchand and
Reinhardt Euler and
Congping Lin and
Imogen Sparkes},
editor = {Adrian{-}Horia Dediu and
Carlos Mart{\'{\i}}n{-}Vide and
Bianca Truthe},
title = {Modeling the Geometry of the Endoplasmic Reticulum Network},
booktitle = {Algorithms for Computational Biology - First International Conference,
AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns},
series = {Lecture Notes in Computer Science},
volume = {8542},
pages = {131--145},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-07953-0\_11},
doi = {10.1007/978-3-319-07953-0\_11},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/alcob/LemarchandELS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/LintzmayerD14,
author = {Carla Negri Lintzmayer and
Zanoni Dias},
editor = {Adrian{-}Horia Dediu and
Carlos Mart{\'{\i}}n{-}Vide and
Bianca Truthe},
title = {On Sorting of Signed Permutations by Prefix and Suffix Reversals and
Transpositions},
booktitle = {Algorithms for Computational Biology - First International Conference,
AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns},
series = {Lecture Notes in Computer Science},
volume = {8542},
pages = {146--157},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-07953-0\_12},
doi = {10.1007/978-3-319-07953-0\_12},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/alcob/LintzmayerD14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/LintzmayerD14a,
author = {Carla Negri Lintzmayer and
Zanoni Dias},
editor = {Adrian{-}Horia Dediu and
Carlos Mart{\'{\i}}n{-}Vide and
Bianca Truthe},
title = {On the Diameter of Rearrangement Problems},
booktitle = {Algorithms for Computational Biology - First International Conference,
AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns},
series = {Lecture Notes in Computer Science},
volume = {8542},
pages = {158--170},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-07953-0\_13},
doi = {10.1007/978-3-319-07953-0\_13},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/alcob/LintzmayerD14a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/MaxwellCK14,
author = {Sean Maxwell and
Mark R. Chance and
Mehmet Koyut{\"{u}}rk},
editor = {Adrian{-}Horia Dediu and
Carlos Mart{\'{\i}}n{-}Vide and
Bianca Truthe},
title = {Efficiently Enumerating All Connected Induced Subgraphs of a Large
Molecular Network},
booktitle = {Algorithms for Computational Biology - First International Conference,
AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns},
series = {Lecture Notes in Computer Science},
volume = {8542},
pages = {171--182},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-07953-0\_14},
doi = {10.1007/978-3-319-07953-0\_14},
timestamp = {Fri, 02 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/alcob/MaxwellCK14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/MorenoDFW14,
author = {Liana Amaya Moreno and
Ozlem Defterli and
Armin F{\"{u}}genschuh and
Gerhard{-}Wilhelm Weber},
editor = {Adrian{-}Horia Dediu and
Carlos Mart{\'{\i}}n{-}Vide and
Bianca Truthe},
title = {Vester's Sensitivity Model for Genetic Networks with Time-Discrete
Dynamics},
booktitle = {Algorithms for Computational Biology - First International Conference,
AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns},
series = {Lecture Notes in Computer Science},
volume = {8542},
pages = {35--46},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-07953-0\_3},
doi = {10.1007/978-3-319-07953-0\_3},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/alcob/MorenoDFW14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/NarzisiMS14,
author = {Giuseppe Narzisi and
Bud Mishra and
Michael C. Schatz},
editor = {Adrian{-}Horia Dediu and
Carlos Mart{\'{\i}}n{-}Vide and
Bianca Truthe},
title = {On Algorithmic Complexity of Biomolecular Sequence Assembly Problem},
booktitle = {Algorithms for Computational Biology - First International Conference,
AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns},
series = {Lecture Notes in Computer Science},
volume = {8542},
pages = {183--195},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-07953-0\_15},
doi = {10.1007/978-3-319-07953-0\_15},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/alcob/NarzisiMS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/NoorAWSNN14,
author = {Amina Noor and
Aitzaz Ahmad and
Bilal Wajid and
Erchin Serpedin and
Mohamed N. Nounou and
Hazem N. Nounou},
editor = {Adrian{-}Horia Dediu and
Carlos Mart{\'{\i}}n{-}Vide and
Bianca Truthe},
title = {A Closed-Form Solution for Transcription Factor Activity Estimation
Using Network Component Analysis},
booktitle = {Algorithms for Computational Biology - First International Conference,
AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns},
series = {Lecture Notes in Computer Science},
volume = {8542},
pages = {196--207},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-07953-0\_16},
doi = {10.1007/978-3-319-07953-0\_16},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/alcob/NoorAWSNN14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/OhtsukiNKMSKYSN14,
author = {Tomohiko Ohtsuki and
Naoki Nariai and
Kaname Kojima and
Takahiro Mimori and
Yukuto Sato and
Yosuke Kawai and
Yumi Yamaguchi{-}Kabata and
Tetsuo Shibuya and
Masao Nagasaki},
editor = {Adrian{-}Horia Dediu and
Carlos Mart{\'{\i}}n{-}Vide and
Bianca Truthe},
title = {{SVEM:} {A} Structural Variant Estimation Method Using Multi-mapped
Reads on Breakpoints},
booktitle = {Algorithms for Computational Biology - First International Conference,
AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns},
series = {Lecture Notes in Computer Science},
volume = {8542},
pages = {208--219},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-07953-0\_17},
doi = {10.1007/978-3-319-07953-0\_17},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/alcob/OhtsukiNKMSKYSN14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/PolychronopoulosKNPAG14,
author = {Dimitris Polychronopoulos and
Anastasia Krithara and
Christoforos Nikolaou and
Georgios Paliouras and
Yannis Almirantis and
George Giannakopoulos},
editor = {Adrian{-}Horia Dediu and
Carlos Mart{\'{\i}}n{-}Vide and
Bianca Truthe},
title = {Analysis and Classification of Constrained {DNA} Elements with N-gram
Graphs and Genomic Signatures},
booktitle = {Algorithms for Computational Biology - First International Conference,
AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns},
series = {Lecture Notes in Computer Science},
volume = {8542},
pages = {220--234},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-07953-0\_18},
doi = {10.1007/978-3-319-07953-0\_18},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/alcob/PolychronopoulosKNPAG14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/RosenbluethMCA14,
author = {David A. Rosenblueth and
Stalin Mu{\~{n}}oz and
Miguel Carrillo and
Eugenio Azpeitia},
editor = {Adrian{-}Horia Dediu and
Carlos Mart{\'{\i}}n{-}Vide and
Bianca Truthe},
title = {Inference of Boolean Networks from Gene Interaction Graphs Using a
{SAT} Solver},
booktitle = {Algorithms for Computational Biology - First International Conference,
AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns},
series = {Lecture Notes in Computer Science},
volume = {8542},
pages = {235--246},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-07953-0\_19},
doi = {10.1007/978-3-319-07953-0\_19},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/alcob/RosenbluethMCA14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/WandeltL14,
author = {Sebastian Wandelt and
Ulf Leser},
editor = {Adrian{-}Horia Dediu and
Carlos Mart{\'{\i}}n{-}Vide and
Bianca Truthe},
title = {{RRCA:} Ultra-Fast Multiple In-species Genome Alignments},
booktitle = {Algorithms for Computational Biology - First International Conference,
AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns},
series = {Lecture Notes in Computer Science},
volume = {8542},
pages = {247--261},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-07953-0\_20},
doi = {10.1007/978-3-319-07953-0\_20},
timestamp = {Sun, 21 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/alcob/WandeltL14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alcob/WohlersBDKA14,
author = {Inken Wohlers and
Mathilde Le Boudic{-}Jamin and
Hristo N. Djidjev and
Gunnar W. Klau and
Rumen Andonov},
editor = {Adrian{-}Horia Dediu and
Carlos Mart{\'{\i}}n{-}Vide and
Bianca Truthe},
title = {Exact Protein Structure Classification Using the Maximum Contact Map
Overlap Metric},
booktitle = {Algorithms for Computational Biology - First International Conference,
AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns},
series = {Lecture Notes in Computer Science},
volume = {8542},
pages = {262--273},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-07953-0\_21},
doi = {10.1007/978-3-319-07953-0\_21},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/alcob/WohlersBDKA14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/alcob/2014,
editor = {Adrian{-}Horia Dediu and
Carlos Mart{\'{\i}}n{-}Vide and
Bianca Truthe},
title = {Algorithms for Computational Biology - First International Conference,
AlCoB 2014, Tarragona, Spain, July 1-3, 2014, Proceedigns},
series = {Lecture Notes in Computer Science},
volume = {8542},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-07953-0},
doi = {10.1007/978-3-319-07953-0},
isbn = {978-3-319-07952-3},
timestamp = {Mon, 16 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/alcob/2014.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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