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@article{DBLP:journals/bmcbi/AbatangeloMDDCMA09,
author = {Luca Abatangelo and
Rosalia Maglietta and
Angela Distaso and
Annarita D'Addabbo and
Teresa Maria Creanza and
Sayan Mukherjee and
Nicola Ancona},
title = {Comparative study of gene set enrichment methods},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {275},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-275},
doi = {10.1186/1471-2105-10-275},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AbatangeloMDDCMA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AcencioL09,
author = {Marcio Luis Acencio and
Ney Lemke},
title = {Towards the prediction of essential genes by integration of network
topology, cellular localization and biological process information},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {290},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-290},
doi = {10.1186/1471-2105-10-290},
timestamp = {Mon, 14 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/AcencioL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AckermannS09,
author = {Marit Ackermann and
Korbinian Strimmer},
title = {A general modular framework for gene set enrichment analysis},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-47},
doi = {10.1186/1471-2105-10-47},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AckermannS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AertsL09,
author = {Jan Aerts and
Andy Law},
title = {An introduction to scripting in Ruby for biologists},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-221},
doi = {10.1186/1471-2105-10-221},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AertsL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AhmedAR09,
author = {Firoz Ahmed and
Hifzur Rahman Ansari and
Gajendra P. S. Raghava},
title = {Prediction of guide strand of microRNAs from its sequence and secondary
structure},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-105},
doi = {10.1186/1471-2105-10-105},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AhmedAR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AlexopoulouADDGHKSW09,
author = {Dimitra Alexopoulou and
Bill Andreopoulos and
Heiko Dietze and
Andreas Doms and
Fabien Gandon and
J{\"{o}}rg Hakenberg and
Khaled Khelif and
Michael Schroeder and
Thomas W{\"{a}}chter},
title = {Biomedical word sense disambiguation with ontologies and metadata:
automation meets accuracy},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-28},
doi = {10.1186/1471-2105-10-28},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/AlexopoulouADDGHKSW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AllemeerschVHMVM09,
author = {Joke Allemeersch and
Steven Van Vooren and
Femke Hannes and
Bart De Moor and
Joris Robert Vermeesch and
Yves Moreau},
title = {An experimental loop design for the detection of constitutional chromosomal
aberrations by array {CGH}},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {380},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-380},
doi = {10.1186/1471-2105-10-380},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/AllemeerschVHMVM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AlmeidaV09,
author = {Jonas S. Almeida and
Susana Vinga},
title = {Biological sequences as pictures - a generic two dimensional solution
for iterated maps},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-100},
doi = {10.1186/1471-2105-10-100},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AlmeidaV09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AlterovitzASDFS09,
author = {Ron Alterovitz and
Aaron Arvey and
Sriram Sankararaman and
Carolina Dallett and
Yoav Freund and
Kimmen Sj{\"{o}}lander},
title = {ResBoost: characterizing and predicting catalytic residues in enzymes},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-197},
doi = {10.1186/1471-2105-10-197},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/AlterovitzASDFS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AndersenGMRKT09,
author = {Claus A. Andersen and
Stefano Gotta and
Letizia Magnoni and
Roberto Raggiaschi and
Andreas Kremer and
Georg C. Terstappen},
title = {Robust {MS} quantification method for phospho-peptides using \({}^{\mbox{18}}\)O/\({}^{\mbox{16}}\)O
labeling},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-141},
doi = {10.1186/1471-2105-10-141},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/AndersenGMRKT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AndersonP09,
author = {James Anderson and
Antonis Papachristodoulou},
title = {On validation and invalidation of biological models},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-132},
doi = {10.1186/1471-2105-10-132},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AndersonP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AndreopoulosWLS09,
author = {Bill Andreopoulos and
Christof Winter and
Dirk Labudde and
Michael Schroeder},
title = {Triangle network motifs predict complexes by complementing high-error
interactomes with structural information},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-196},
doi = {10.1186/1471-2105-10-196},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/AndreopoulosWLS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AnnestBRY09,
author = {Amalia Annest and
Roger Eugene Bumgarner and
Adrian E. Raftery and
Ka Yee Yeung},
title = {Iterative Bayesian Model Averaging: a method for the application of
survival analysis to high-dimensional microarray data},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-72},
doi = {10.1186/1471-2105-10-72},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AnnestBRY09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ArakakiHS09,
author = {Adrian K. Arakaki and
Ying Huang and
Jeffrey Skolnick},
title = {EFICAz\({}^{\mbox{2}}\): enzyme function inference by a combined approach
enhanced by machine learning},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-107},
doi = {10.1186/1471-2105-10-107},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ArakakiHS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ArakawaTKKIOT09,
author = {Kazuharu Arakawa and
Satoshi Tamaki and
Nobuaki Kono and
Nobuhiro Kido and
Keita Ikegami and
Ryu Ogawa and
Masaru Tomita},
title = {Genome Projector: zoomable genome map with multiple views},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-31},
doi = {10.1186/1471-2105-10-31},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ArakawaTKKIOT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ArrialTB09,
author = {Roberto T. Arrial and
Roberto C. Togawa and
Marcelo M. Brigido},
title = {Screening non-coding RNAs in transcriptomes from neglected species
using {PORTRAIT:} case study of the pathogenic fungus Paracoccidioides
brasiliensis},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-239},
doi = {10.1186/1471-2105-10-239},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ArrialTB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ArrigoTEGA09,
author = {Nils Arrigo and
Jarek W. Tuszynski and
Dorothee Ehrich and
Tommy Gerdes and
Nadir Alvarez},
title = {Evaluating the impact of scoring parameters on the structure of intra-specific
genetic variation using RawGeno, an {R} package for automating {AFLP}
scoring},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-33},
doi = {10.1186/1471-2105-10-33},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ArrigoTEGA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ArslanL09,
author = {Erdem Arslan and
Ian J. Laurenzi},
title = {An efficient algorithm for the stochastic simulation of the hybridization
of {DNA} to microarrays},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {411},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-411},
doi = {10.1186/1471-2105-10-411},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ArslanL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AryeeGKMQ09,
author = {Martin J. Aryee and
Jos{\'{e}} A. Guti{\'{e}}rrez{-}Pabello and
Igor Kramnik and
Tapabrata Maiti and
John Quackenbush},
title = {An improved empirical bayes approach to estimating differential gene
expression in microarray time-course data: {BETR} (Bayesian Estimation
of Temporal Regulation)},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {409},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-409},
doi = {10.1186/1471-2105-10-409},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AryeeGKMQ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AukenJCMS09,
author = {Kimberly Van Auken and
Joshua Jaffery and
Juancarlos Chan and
Hans{-}Michael M{\"{u}}ller and
Paul W. Sternberg},
title = {Semi-automated curation of protein subcellular localization: a text
mining-based approach to Gene Ontology {(GO)} Cellular Component curation},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-228},
doi = {10.1186/1471-2105-10-228},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AukenJCMS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AusielloGGIH09,
author = {Gabriele Ausiello and
Pier Federico Gherardini and
Elena Gatti and
Ottaviano Incani and
Manuela Helmer{-}Citterich},
title = {Structural motifs recurring in different folds recognize the same
ligand fragments},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-182},
doi = {10.1186/1471-2105-10-182},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AusielloGGIH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BaPPM09,
author = {Alex N. Nguyen Ba and
Anastassia Pogoutse and
Nicholas Provart and
Alan M. Moses},
title = {NLStradamus: a simple Hidden Markov Model for nuclear localization
signal prediction},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-202},
doi = {10.1186/1471-2105-10-202},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BaPPM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BacarditSHVSK09,
author = {Jaume Bacardit and
Michael Stout and
Jonathan D. Hirst and
Alfonso Valencia and
Robert Elliott Smith and
Natalio Krasnogor},
title = {Automated Alphabet Reduction for Protein Datasets},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-6},
doi = {10.1186/1471-2105-10-6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BacarditSHVSK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BaldazziPBC09,
author = {Valentina Baldazzi and
Paola Paci and
Massimo Bernaschi and
Filippo Castiglione},
title = {Modeling lymphocyte homing and encounters in lymph nodes},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {387},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-387},
doi = {10.1186/1471-2105-10-387},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/BaldazziPBC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BandyopadhyayB09,
author = {Sanghamitra Bandyopadhyay and
Malay Bhattacharyya},
title = {Analyzing miRNA co-expression networks to explore TF-miRNA regulation},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-163},
doi = {10.1186/1471-2105-10-163},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/BandyopadhyayB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BansalKM09,
author = {Shweta Bansal and
Shashank Khandelwal and
Lauren Ancel Meyers},
title = {Exploring biological network structure with clustered random networks},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {405},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-405},
doi = {10.1186/1471-2105-10-405},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BansalKM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BarlatiCM09,
author = {Sergio Barlati and
Sergio Chiesa and
Chiara Magri},
title = {\emph{"GenotypeColour\({}^{\mbox{TM}}\)"}: colour visualisation of
SNPs and CNVs},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-49},
doi = {10.1186/1471-2105-10-49},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BarlatiCM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BergKMB09,
author = {Bart H. J. van den Berg and
Jay H. Konieczka and
Fiona M. McCarthy and
Shane C. Burgess},
title = {\emph{ArrayIDer}: automated structural re-annotation pipeline for
{DNA} microarrays},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-30},
doi = {10.1186/1471-2105-10-30},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BergKMB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BergMWDKS09,
author = {Robert A. van den Berg and
Iven Van Mechelen and
Tom F. Wilderjans and
Katrijn Van Deun and
Henk A. L. Kiers and
Age K. Smilde},
title = {Integrating functional genomics data using maximum likelihood based
simultaneous component analysis},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {340},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-340},
doi = {10.1186/1471-2105-10-340},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/BergMWDKS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BillupsNRPS09,
author = {Stephen C. Billups and
Margaret C. Neville and
Michael Rudolph and
Weston Porter and
Pepper Schedin},
title = {Identifying significant temporal variation in time course microarray
data without replicates},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-96},
doi = {10.1186/1471-2105-10-96},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BillupsNRPS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BinderS09,
author = {Harald Binder and
Martin Schumacher},
title = {Incorporating pathway information into boosting estimation of high-dimensional
risk prediction models},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-18},
doi = {10.1186/1471-2105-10-18},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BinderS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BisogninCFRRBB09,
author = {Andrea Bisognin and
Alessandro Coppe and
Francesco Ferrari and
Davide Risso and
Chiara Romualdi and
Silvio Bicciato and
Stefania Bortoluzzi},
title = {{A-MADMAN:} Annotation-based microarray data meta-analysis tool},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-201},
doi = {10.1186/1471-2105-10-201},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BisogninCFRRBB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BlomADPVZG09,
author = {Jochen Blom and
Stefan P. Albaum and
Daniel Doppmeier and
Alfred P{\"{u}}hler and
Frank{-}J{\"{o}}rg Vorh{\"{o}}lter and
Martha Zakrzewski and
Alexander Goesmann},
title = {{EDGAR:} {A} software framework for the comparative analysis of prokaryotic
genomes},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-154},
doi = {10.1186/1471-2105-10-154},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BlomADPVZG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BlumBK09,
author = {Torsten Blum and
Sebastian Briesemeister and
Oliver Kohlbacher},
title = {MultiLoc2: integrating phylogeny and Gene Ontology terms improves
subcellular protein localization prediction},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {274},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-274},
doi = {10.1186/1471-2105-10-274},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BlumBK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Bordner09,
author = {Andrew J. Bordner},
title = {Predicting protein-protein binding sites in membrane proteins},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {312},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-312},
doi = {10.1186/1471-2105-10-312},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Bordner09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BottingTBSD09,
author = {Shaleen K. Botting and
Jerome P. Trzeciakowski and
Michelle F. Benoit and
Salama A. Salama and
Concepcion R. Diaz{-}Arrastia},
title = {Sample entropy analysis of cervical neoplasia gene-expression signatures},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-66},
doi = {10.1186/1471-2105-10-66},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BottingTBSD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BovelstadNB09,
author = {Hege M. B{\o}velstad and
St{\aa}le Nyg{\aa}rd and
{\O}rnulf Borgan},
title = {Survival prediction from clinico-genomic models - a comparative study},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {413},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-413},
doi = {10.1186/1471-2105-10-413},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/BovelstadNB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BoyleRCBKS09,
author = {John Boyle and
Hector Rovira and
Christopher C. Cavnor and
David B. Burdick and
Sarah A. Killcoyne and
Ilya Shmulevich},
title = {Adaptable data management for systems biology investigations},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-79},
doi = {10.1186/1471-2105-10-79},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BoyleRCBKS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BozdagCL09,
author = {Serdar Bozdag and
Timothy J. Close and
Stefano Lonardi},
title = {A compartmentalized approach to the assembly of physical maps},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-217},
doi = {10.1186/1471-2105-10-217},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/BozdagCL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BrandaoDS09,
author = {Marcelo M. Brand{\~{a}}o and
Luiza L. Dantas and
Marcio C. Silva{-}Filho},
title = {AtPIN: \emph{Arabidopsis thaliana }Protein Interaction Network},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {454},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-454},
doi = {10.1186/1471-2105-10-454},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BrandaoDS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BraschLF09,
author = {Steffen Brasch and
Lars Linsen and
Georg Fuellen},
title = {{VANLO} - Interactive visual exploration of aligned biological networks},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {327},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-327},
doi = {10.1186/1471-2105-10-327},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/BraschLF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BrayCBGDW09,
author = {Tracey Bray and
Pedro Chan and
Salim Bougouffa and
Richard B. Greaves and
Andrew J. Doig and
Jim Warwicker},
title = {SitesIdentify: a protein functional site prediction tool},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {379},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-379},
doi = {10.1186/1471-2105-10-379},
timestamp = {Thu, 09 Sep 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/BrayCBGDW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BringansHCTLSO09,
author = {Scott Bringans and
James K. Hane and
Tammy Casey and
Kar{-}Chun Tan and
Richard Lipscombe and
Peter S. Solomon and
Richard P. Oliver},
title = {Deep proteogenomics; high throughput gene validation by multidimensional
liquid chromatography and mass spectrometry of proteins from the fungal
wheat pathogen \emph{Stagonospora nodorum}},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {301},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-301},
doi = {10.1186/1471-2105-10-301},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BringansHCTLSO09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BrownA09,
author = {J. B. Brown and
Tatsuya Akutsu},
title = {Identification of novel {DNA} repair proteins via primary sequence,
secondary structure, and homology},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-25},
doi = {10.1186/1471-2105-10-25},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/BrownA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BrustoliniFCP09,
author = {Ot{\'{a}}vio J. B. Brustolini and
Luciano G. Fietto and
Cosme D. Cruz and
Fl{\'{a}}via M. L. Passos},
title = {Computational analysis of the interaction between transcription factors
and the predicted secreted proteome of the yeast \emph{Kluyveromyces
lactis}},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-194},
doi = {10.1186/1471-2105-10-194},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BrustoliniFCP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BryantWM09,
author = {Douglas W. Bryant Jr. and
Weng{-}Keen Wong and
Todd C. Mockler},
title = {{QSRA} - a quality-value guided \emph{de novo }short read assembler},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-69},
doi = {10.1186/1471-2105-10-69},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BryantWM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BunessRKT09,
author = {Andreas Buness and
Markus Ruschhaupt and
Ruprecht Kuner and
Achim Tresch},
title = {Classification across gene expression microarray studies},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {453},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-453},
doi = {10.1186/1471-2105-10-453},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BunessRKT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BuschW09,
author = {Norbert Busch and
Gero Wedemann},
title = {Modeling genomic data with type attributes, balancing stability and
maintainability},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-97},
doi = {10.1186/1471-2105-10-97},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BuschW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CaiSWGWXSL09,
author = {Zhipeng Cai and
Hadi Sabaa and
Yining Wang and
Randy Goebel and
Zhiquan Wang and
Jiaofen Xu and
Paul Stothard and
Guohui Lin},
title = {Most parsimonious haplotype allele sharing determination},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-115},
doi = {10.1186/1471-2105-10-115},
timestamp = {Wed, 30 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/CaiSWGWXSL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CalleGCIM09,
author = {Guillermo de la Calle and
Miguel Garc{\'{\i}}a{-}Remesal and
Stefano Chiesa and
Diana de la Iglesia and
Victor Maojo},
title = {{BIRI:} a new approach for automatically discovering and indexing
available public bioinformatics resources from the literature},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {320},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-320},
doi = {10.1186/1471-2105-10-320},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CalleGCIM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CamachoCAMPBM09,
author = {Christiam Camacho and
George Coulouris and
Vahram Avagyan and
Ning Ma and
Jason S. Papadopoulos and
Kevin Bealer and
Thomas L. Madden},
title = {{BLAST+:} architecture and applications},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {421},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-421},
doi = {10.1186/1471-2105-10-421},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/CamachoCAMPBM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CampiteliSMKPG09,
author = {M{\^{o}}nica G. Campiteli and
Frederico M. Soriani and
Iran Malavazi and
Osame Kinouchi and
Carlos A. de B. Pereira and
Gustavo H. Goldman},
title = {A reliable measure of similarity based on dependency for short time
series: an application to gene expression networks},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {270},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-270},
doi = {10.1186/1471-2105-10-270},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/CampiteliSMKPG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CaoMRB09,
author = {Kim{-}Anh L{\^{e}} Cao and
Pascal G. P. Martin and
Christ{\`{e}}le Robert{-}Grani{\'{e}} and
Philippe Besse},
title = {Sparse canonical methods for biological data integration: application
to a cross-platform study},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-34},
doi = {10.1186/1471-2105-10-34},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CaoMRB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CaoXZWW09,
author = {Jing Cao and
Xian{-}Jin Xie and
Song Zhang and
Angelique Whitehurst and
Michael A. White},
title = {Bayesian optimal discovery procedure for simultaneous significance
testing},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-5},
doi = {10.1186/1471-2105-10-5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CaoXZWW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Carvajal-RodriguezUR09,
author = {Antonio Carvajal{-}Rodr{\'{\i}}guez and
Jacobo de U{\~{n}}a{-}{\'{A}}lvarez and
Emilio Rol{\'{a}}n{-}Alvarez},
title = {A new multitest correction (SGoF) that increases its statistical power
when increasing the number of tests},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-209},
doi = {10.1186/1471-2105-10-209},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Carvajal-RodriguezUR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChaiSBTAK09,
author = {High{-}Seng Chai and
Hugues Sicotte and
Kent R. Bailey and
Stephen T. Turner and
Yan W. Asmann and
Jean{-}Pierre A. Kocher},
title = {{GLOSSI:} a method to assess the association of genetic loci-sets
with complex diseases},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-102},
doi = {10.1186/1471-2105-10-102},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChaiSBTAK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChakrabartiP09,
author = {Saikat Chakrabarti and
Anna R. Panchenko},
title = {Ensemble approach to predict specificity determinants: benchmarking
and validation},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-207},
doi = {10.1186/1471-2105-10-207},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChakrabartiP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChanLLL09,
author = {Tak{-}Ming Chan and
Gang Li and
Kwong{-}Sak Leung and
Kin{-}Hong Lee},
title = {Discovering multiple realistic {TFBS} motifs based on a generalized
model},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {321},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-321},
doi = {10.1186/1471-2105-10-321},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChanLLL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChatziioannouMK09,
author = {Aristotelis Chatziioannou and
Panagiotis Moulos and
Fragiskos N. Kolisis},
title = {Gene {ARMADA:} an integrated multi-analysis platform for microarray
data implemented in {MATLAB}},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {354},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-354},
doi = {10.1186/1471-2105-10-354},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChatziioannouMK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChauhanMR09,
author = {Jagat Singh Chauhan and
Nitish K. Mishra and
Gajendra P. S. Raghava},
title = {Identification of {ATP} binding residues of a protein from its primary
sequence},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {434},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-434},
doi = {10.1186/1471-2105-10-434},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChauhanMR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenAJ09,
author = {Jing Chen and
Bruce J. Aronow and
Anil G. Jegga},
title = {Disease candidate gene identification and prioritization using protein
interaction networks},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-73},
doi = {10.1186/1471-2105-10-73},
timestamp = {Mon, 31 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenAJ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenAJ09a,
author = {Jing Chen and
Bruce J. Aronow and
Anil G. Jegga},
title = {Correction: Disease candidate gene identification and prioritization
using protein interaction networks},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {406},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-406},
doi = {10.1186/1471-2105-10-406},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenAJ09a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenHCH09,
author = {Pei{-}Chun Chen and
Su{-}Yun Huang and
Wei J. Chen and
Chuhsing Kate Hsiao},
title = {A new regularized least squares support vector regression for gene
selection},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-44},
doi = {10.1186/1471-2105-10-44},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenHCH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenHLX09,
author = {Tsong Yueh Chen and
Joshua Wing Kei Ho and
Huai Liu and
Xiaoyuan Xie},
title = {An innovative approach for testing bioinformatics programs using metamorphic
testing},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-24},
doi = {10.1186/1471-2105-10-24},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenHLX09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenHY09,
author = {Chih{-}Chieh Chen and
Jenn{-}Kang Hwang and
Jinn{-}Moon Yang},
title = {(PS)\({}^{\mbox{2}}\)-v2: template-based protein structure prediction
server},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {366},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-366},
doi = {10.1186/1471-2105-10-366},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenHY09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChiognaMRR09,
author = {Monica Chiogna and
Maria Sofia Massa and
Davide Risso and
Chiara Romualdi},
title = {A comparison on effects of normalisations in the detection of differentially
expressed genes},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-61},
doi = {10.1186/1471-2105-10-61},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChiognaMRR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChipmanS09,
author = {Kyle C. Chipman and
Ambuj K. Singh},
title = {Predicting genetic interactions with random walks on biological networks},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-17},
doi = {10.1186/1471-2105-10-17},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChipmanS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChoKK09,
author = {Sung{-}Bum Cho and
Jihun Kim and
Ju Han Kim},
title = {Identifying set-wise differential co-expression in gene expression
microarray data},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-109},
doi = {10.1186/1471-2105-10-109},
timestamp = {Thu, 28 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChoKK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChoiG09,
author = {Kwangbom Choi and
Shawn M. Gomez},
title = {Comparison of phylogenetic trees through alignment of embedded evolutionary
distances},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {423},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-423},
doi = {10.1186/1471-2105-10-423},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChoiG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChouTPHRS09,
author = {Hui{-}Hsien Chou and
Arunee Trisiriroj and
Sunyoung Park and
Yue{-}Ie C. Hsing and
Pamela C. Ronald and
Patrick S. Schnable},
title = {Direct calibration of PICKY-designed microarrays},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {347},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-347},
doi = {10.1186/1471-2105-10-347},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChouTPHRS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChuangHCS09,
author = {Cheng{-}Long Chuang and
Kenneth Hung and
Chung{-}Ming Chen and
Grace S. Shieh},
title = {Uncovering transcriptional interactions via an adaptive fuzzy logic
approach},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {400},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-400},
doi = {10.1186/1471-2105-10-400},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChuangHCS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChungV09,
author = {Ho{-}Ryun Chung and
Martin Vingron},
title = {Comparison of sequence-dependent tiling array normalization approaches},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-204},
doi = {10.1186/1471-2105-10-204},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChungV09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ClementeIVG09,
author = {Jos{\'{e}} Carlos Clemente and
Kazuho Ikeo and
Gabriel Valiente and
Takashi Gojobori},
title = {Optimized ancestral state reconstruction using Sankoff parsimony},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-51},
doi = {10.1186/1471-2105-10-51},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ClementeIVG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Cuadros-InostrozaCRKLPWH09,
author = {{\'{A}}lvaro Cuadros{-}Inostroza and
Camila Caldana and
Henning Redestig and
Miyako Kusano and
Jan Lisec and
Hugo Pe{\~{n}}a{-}Cort{\'{e}}s and
Lothar Willmitzer and
Matthew A. Hannah},
title = {TargetSearch - a Bioconductor package for the efficient preprocessing
of {GC-MS} metabolite profiling data},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {428},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-428},
doi = {10.1186/1471-2105-10-428},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Cuadros-InostrozaCRKLPWH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CulmanBGCB09,
author = {Steven W. Culman and
Robert Bukowski and
Hugh G. Gauch and
Hinsby Cadillo{-}Quiroz and
Daniel H. Buckley},
title = {\emph{T-REX}: software for the processing and analysis of {T-RFLP}
data},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-171},
doi = {10.1186/1471-2105-10-171},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CulmanBGCB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DaiEYL09,
author = {Xiaofeng Dai and
Timo Erkkil{\"{a}} and
Olli Yli{-}Harja and
Harri L{\"{a}}hdesm{\"{a}}ki},
title = {A joint finite mixture model for clustering genes from independent
Gaussian and beta distributed data},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-165},
doi = {10.1186/1471-2105-10-165},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DaiEYL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DattaZ09,
author = {Debayan Datta and
Hongyu Zhao},
title = {Effect of false positive and false negative rates on inference of
binding target conservation across different conditions and species
from ChIP-chip data},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-23},
doi = {10.1186/1471-2105-10-23},
timestamp = {Thu, 28 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/DattaZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DengEC09,
author = {Xin Deng and
Jesse Eickholt and
Jianlin Cheng},
title = {PreDisorder: ab initio sequence-based prediction of protein disordered
regions},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {436},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-436},
doi = {10.1186/1471-2105-10-436},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/DengEC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DengGDZ09,
author = {Lei Deng and
Jihong Guan and
Qiwen Dong and
Shuigeng Zhou},
title = {Prediction of protein-protein interaction sites using an ensemble
method},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {426},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-426},
doi = {10.1186/1471-2105-10-426},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DengGDZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DeslerSSRR09,
author = {Claus Desler and
Prashanth Suravajhala and
May Sanderhoff and
Merete Rasmussen and
Lene Juel Rasmussen},
title = {\emph{In Silico }screening for functional candidates amongst hypothetical
proteins},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {289},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-289},
doi = {10.1186/1471-2105-10-289},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DeslerSSRR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DeunSWKM09,
author = {Katrijn Van Deun and
Age K. Smilde and
Mari{\"{e}}t J. van der Werf and
Henk A. L. Kiers and
Iven Van Mechelen},
title = {A structured overview of simultaneous component based data integration},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-246},
doi = {10.1186/1471-2105-10-246},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/DeunSWKM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DiazKGNN09,
author = {Naryttza N. Diaz and
Lutz Krause and
Alexander Goesmann and
Karsten Niehaus and
Tim W. Nattkemper},
title = {{TACOA} - Taxonomic classification of environmental genomic fragments
using a kernelized nearest neighbor approach},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-56},
doi = {10.1186/1471-2105-10-56},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DiazKGNN09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DjebbariL09,
author = {Amira Djebbari and
Aur{\'{e}}lie Labbe},
title = {Refining gene signatures: a Bayesian approach},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {410},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-410},
doi = {10.1186/1471-2105-10-410},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DjebbariL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DogrusozCDB09,
author = {Ugur Dogrus{\"{o}}z and
Ahmet Cetintas and
Emek Demir and
Ozgun Babur},
title = {Algorithms for effective querying of compound graph-based pathway
databases},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {376},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-376},
doi = {10.1186/1471-2105-10-376},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DogrusozCDB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DondrupAGHJKKKLMMNRTTPG09,
author = {Michael Dondrup and
Stefan P. Albaum and
Thasso Griebel and
Kolja Henckel and
Sebastian J{\"{u}}nemann and
Tim Kahlke and
Christiane K. Kleindt and
Helge K{\"{u}}ster and
Burkhard Linke and
Dominik Mertens and
Virginie Mittard{-}Runte and
Heiko Neuweger and
Kai J. Runte and
Andreas Tauch and
Felix Tille and
Alfred P{\"{u}}hler and
Alexander Goesmann},
title = {{EMMA} 2 - {A} MAGE-compliant system for the collaborative analysis
and integration of microarray data},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-50},
doi = {10.1186/1471-2105-10-50},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/DondrupAGHJKKKLMMNRTTPG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DraperEPBSLZ09,
author = {John Draper and
David P. Enot and
David Parker and
Manfred Beckmann and
Stuart Snowdon and
Wanchang Lin and
Hassan Zubair},
title = {Metabolite signal identification in accurate mass metabolomics data
with MZedDB, an interactive \emph{m/z }annotation tool utilising predicted
ionisation behaviour 'rules'},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-227},
doi = {10.1186/1471-2105-10-227},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/DraperEPBSLZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DrawidGNGS09,
author = {Amar Drawid and
Nupur Gupta and
Vijayalakshmi H. Nagaraj and
C{\'{e}}line G{\'{e}}linas and
Anirvan M. Sengupta},
title = {{OHMM:} a Hidden Markov Model accurately predicting the occupancy
of a transcription factor with a self-overlapping binding motif},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-208},
doi = {10.1186/1471-2105-10-208},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DrawidGNGS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DuJL09,
author = {Pufeng Du and
Liyan Jia and
Yanda Li},
title = {CURE-Chloroplast: {A} chloroplast C-to-U {RNA} editing predictor for
seed plants},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-135},
doi = {10.1186/1471-2105-10-135},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DuJL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DuTCBMKKGLMLW09,
author = {Rose Du and
Kelan Tantisira and
Vincent J. Carey and
Soumyaroop Bhattacharya and
Stephanie Metje and
Alvin T. Kho and
Barbara J. Klanderman and
Roger Gaedigk and
Ross Lazarus and
Thomas J. Mariani and
J. Steven Leeder and
Scott T. Weiss},
title = {Platform dependence of inference on gene-wise and gene-set involvement
in human lung development},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-189},
doi = {10.1186/1471-2105-10-189},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/DuTCBMKKGLMLW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DuchrowSGPKW09,
author = {Timo Duchrow and
Timur Shtatland and
Daniel Guettler and
Misha Pivovarov and
Stefan Kramer and
Ralph Weissleder},
title = {Enhancing navigation in biomedical databases by community voting and
database-driven text classification},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {317},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-317},
doi = {10.1186/1471-2105-10-317},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DuchrowSGPKW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DurekSWSW09,
author = {Pawel Durek and
Christian Schudoma and
Wolfram Weckwerth and
Joachim Selbig and
Dirk Walther},
title = {Detection and characterization of 3D-signature phosphorylation site
motifs and their contribution towards improved phosphorylation site
prediction in proteins},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-117},
doi = {10.1186/1471-2105-10-117},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DurekSWSW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DurinckBSD09,
author = {Steffen Durinck and
James H. Bullard and
Paul T. Spellman and
Sandrine Dudoit},
title = {GenomeGraphs: integrated genomic data visualization with {R}},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-2},
doi = {10.1186/1471-2105-10-2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DurinckBSD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DutkowskiT09,
author = {Janusz Dutkowski and
Jerzy Tiuryn},
title = {Phylogeny-guided interaction mapping in seven eukaryotes},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {393},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-393},
doi = {10.1186/1471-2105-10-393},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DutkowskiT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DyrkaN09,
author = {Witold Dyrka and
Jean{-}Christophe Nebel},
title = {A stochastic context free grammar based framework for analysis of
protein sequences},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {323},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-323},
doi = {10.1186/1471-2105-10-323},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/DyrkaN09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/EdenNSLY09,
author = {Eran Eden and
Roy Navon and
Israel Steinfeld and
Doron Lipson and
Zohar Yakhini},
title = {\emph{GOrilla}: a tool for discovery and visualization of enriched
{GO} terms in ranked gene lists},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-48},
doi = {10.1186/1471-2105-10-48},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/EdenNSLY09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Edgar09,
author = {Robert C. Edgar},
title = {Optimizing substitution matrix choice and gap parameters for sequence
alignment},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {396},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-396},
doi = {10.1186/1471-2105-10-396},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Edgar09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/EggleDBS09,
author = {Daniela Eggle and
Svenja Debey{-}Pascher and
Marc Beyer and
Joachim L. Schultze},
title = {The development of a comparison approach for Illumina bead chips unravels
unexpected challenges applying newest generation microarrays},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-186},
doi = {10.1186/1471-2105-10-186},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/EggleDBS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/EilbeckMHY09,
author = {Karen Eilbeck and
Barry Moore and
Carson Holt and
Mark Yandell},
title = {Quantitative measures for the management and comparison of annotated
genomes},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-67},
doi = {10.1186/1471-2105-10-67},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/EilbeckMHY09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ErillO09,
author = {Ivan Erill and
Michael C. O'Neill},
title = {A reexamination of information theory-based methods for DNA-binding
site identification},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-57},
doi = {10.1186/1471-2105-10-57},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ErillO09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ErtenLBLK09,
author = {Sinan Erten and
Xin Li and
G{\"{u}}rkan Bebek and
Jing Li and
Mehmet Koyut{\"{u}}rk},
title = {Phylogenetic analysis of modularity in protein interaction networks},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {333},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-333},
doi = {10.1186/1471-2105-10-333},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ErtenLBLK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/EstradaBBS09,
author = {Jorge Estrada and
Pau Bernad{\'{o}} and
Martin Blackledge and
Javier Sancho},
title = {ProtSA: a web application for calculating sequence specific protein
solvent accessibilities in the unfolded ensemble},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-104},
doi = {10.1186/1471-2105-10-104},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/EstradaBBS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ExarchosEPTF09,
author = {Costas P. Exarchos and
Themis P. Exarchos and
Costas Papaloukas and
Anastassios N. Troganis and
Dimitrios I. Fotiadis},
title = {Detection of discriminative sequence patterns in the neighborhood
of proline cis peptide bonds and their functional annotation},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-113},
doi = {10.1186/1471-2105-10-113},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ExarchosEPTF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FariaFF09,
author = {Daniel Faria and
Ant{\'{o}}nio E. N. Ferreira and
Andr{\'{e}} O. Falc{\~{a}}o},
title = {Enzyme classification with peptide programs: a comparative study},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-231},
doi = {10.1186/1471-2105-10-231},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FariaFF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FayruzovCCH09,
author = {Timur Fayruzov and
Martine De Cock and
Chris Cornelis and
V{\'{e}}ronique Hoste},
title = {Linguistic feature analysis for protein interaction extraction},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {374},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-374},
doi = {10.1186/1471-2105-10-374},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/FayruzovCCH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FernandesPF09,
author = {Francisco Fernandes and
Lu{\'{\i}}sa Pereira and
Ana T. Freitas},
title = {{CSA:} An efficient algorithm to improve circular {DNA} multiple alignment},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-230},
doi = {10.1186/1471-2105-10-230},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FernandesPF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Fernandez09,
author = {Jos{\'{e}}{-}Jes{\'{u}}s Fern{\'{a}}ndez},
title = {{TOMOBFLOW:} feature-preserving noise filtering for electron tomography},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-178},
doi = {10.1186/1471-2105-10-178},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Fernandez09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FerrantiniAHC09,
author = {Alessandro Ferrantini and
Joke Allemeersch and
Paul van Hummelen and
Enrico Carlon},
title = {Thermodynamic scaling behavior in genechips},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-3},
doi = {10.1186/1471-2105-10-3},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/FerrantiniAHC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FieldSLBMDEP09,
author = {Helen I. Field and
Serena A. Scollen and
Craig Luccarini and
Caroline Baynes and
Jonathan Morrison and
Alison M. Dunning and
Douglas F. Easton and
Paul D. P. Pharoah},
title = {Seq4SNPs: new software for retrieval of multiple, accurately annotated
{DNA} sequences, ready formatted for {SNP} assay design},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-180},
doi = {10.1186/1471-2105-10-180},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FieldSLBMDEP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FischerENBSM09,
author = {Andr{\'{e}} Fischer and
Nils Enkler and
Gerd Neudert and
Marco Bocola and
Reinhard Sterner and
Rainer Merkl},
title = {TransCent: Computational enzyme design by transferring active sites
and considering constraints relevant for catalysis},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-54},
doi = {10.1186/1471-2105-10-54},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FischerENBSM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FranciscoBRC09,
author = {Alexandre P. Francisco and
Miguel M. F. Bugalho and
M{\'{a}}rio Ramirez and
Jo{\~{a}}o A. Carri{\c{c}}o},
title = {Global optimal eBURST analysis of multilocus typing data using a graphic
matroid approach},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-152},
doi = {10.1186/1471-2105-10-152},
timestamp = {Sat, 04 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FranciscoBRC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Frank09,
author = {Daniel N. Frank},
title = {\emph{BARCRAWL }and \emph{BARTAB}: software tools for the design and
implementation of barcoded primers for highly multiplexed {DNA} sequencing},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {362},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-362},
doi = {10.1186/1471-2105-10-362},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Frank09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FrechKDKHBO09,
author = {Christian Frech and
Michael Kommenda and
Viktoria Dorfer and
Thomas Kern and
Helmut Hintner and
Johann W. Bauer and
Kamil {\"{O}}nder},
title = {Improved homology-driven computational validation of protein-protein
interactions motivated by the evolutionary gene duplication and divergence
hypothesis},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-21},
doi = {10.1186/1471-2105-10-21},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FrechKDKHBO09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FreiWL09,
author = {Ursula K. Frei and
Bernd Wollenweber and
Thomas L{\"{u}}bberstedt},
title = {\emph{"PolyMin"}: software for identification of the minimum number
of polymorphisms required for haplotype and genotype differentiation},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-176},
doi = {10.1186/1471-2105-10-176},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FreiWL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FreilichGGBTO09,
author = {Shiri Freilich and
Leon Goldovsky and
Assaf Gottlieb and
Eric Blanc and
Sophia Tsoka and
Christos A. Ouzounis},
title = {Stratification of co-evolving genomic groups using ranked phylogenetic
profiles},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {355},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-355},
doi = {10.1186/1471-2105-10-355},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FreilichGGBTO09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FreudenbergJHM09,
author = {Johannes M. Freudenberg and
Vineet K. Joshi and
Zhen Hu and
Mario Medvedovic},
title = {{CLEAN:} CLustering Enrichment ANalysis},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-234},
doi = {10.1186/1471-2105-10-234},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FreudenbergJHM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FrohlichSABB09,
author = {Holger Fr{\"{o}}hlich and
{\"{O}}zg{\"{u}}r Sahin and
Dorit Arlt and
Christian Bender and
Tim Bei{\ss}barth},
title = {Deterministic Effects Propagation Networks for reconstructing protein
signaling networks from multiple interventions},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {322},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-322},
doi = {10.1186/1471-2105-10-322},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FrohlichSABB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FufezanS09,
author = {Christian Fufezan and
Michael Specht},
title = {p3d - Python module for structural bioinformatics},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {258},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-258},
doi = {10.1186/1471-2105-10-258},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FufezanS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FujisawaHHTEMSSK09,
author = {Hironori Fujisawa and
Youko Horiuchi and
Yoshiaki Harushima and
Toyoyuki Takada and
Shinto Eguchi and
Takako Mochizuki and
Takayuki Sakaguchi and
Toshihiko Shiroishi and
Nori Kurata},
title = {{SNEP:} Simultaneous detection of nucleotide and expression polymorphisms
using Affymetrix GeneChip},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-131},
doi = {10.1186/1471-2105-10-131},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/FujisawaHHTEMSSK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FujitaPSM09,
author = {Andr{\'{e}} Fujita and
Alexandre Galv{\~{a}}o Patriota and
Jo{\~{a}}o Ricardo Sato and
Satoru Miyano},
title = {The impact of measurement errors in the identification of regulatory
networks},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {412},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-412},
doi = {10.1186/1471-2105-10-412},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FujitaPSM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FukudaNDTGMKANT09,
author = {Yoko Fukuda and
Yasuo Nakahara and
Hidetoshi Date and
Yuji Takahashi and
Jun Goto and
Akinori Miyashita and
Ryozo Kuwano and
Hiroki Adachi and
Eiji Nakamura and
Shoji Tsuji},
title = {{SNP} HiTLink: a high-throughput linkage analysis system employing
dense {SNP} data},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-121},
doi = {10.1186/1471-2105-10-121},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FukudaNDTGMKANT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GarciaLCB09,
author = {Fernando Garc{\'{\i}}a{-}Alcalde and
Francisco{-}Javier Lopez and
Carlos Cano and
Armando Blanco},
title = {FISim: {A} new similarity measure between transcription factor binding
sites based on the fuzzy integral},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-224},
doi = {10.1186/1471-2105-10-224},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GarciaLCB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GattikerHLXCRP09,
author = {Alexandre Gattiker and
Leandro Hermida and
Robin Liechti and
Ioannis Xenarios and
Olivier Collin and
Jacques Rougemont and
Michael Primig},
title = {{MIMAS} 3.0 is a Multiomics Information Management and Annotation
System},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-151},
doi = {10.1186/1471-2105-10-151},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GattikerHLXCRP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GebackK09,
author = {Tobias Geb{\"{a}}ck and
Petros Koumoutsakos},
title = {Edge detection in microscopy images using curvelets},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-75},
doi = {10.1186/1471-2105-10-75},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GebackK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GelascaOFKM09,
author = {Elisa Drelie Gelasca and
Boguslaw Obara and
Dmitry V. Fedorov and
Kristian Kvilekval and
B. S. Manjunath},
title = {A biosegmentation benchmark for evaluation of bioimage analysis methods},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {368},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-368},
doi = {10.1186/1471-2105-10-368},
timestamp = {Wed, 01 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/GelascaOFKM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GerlachJTGS09,
author = {Wolfgang Gerlach and
Sebastian J{\"{u}}nemann and
Felix Tille and
Alexander Goesmann and
Jens Stoye},
title = {WebCARMA: a web application for the functional and taxonomic classification
of unassembled metagenomic reads},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {430},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-430},
doi = {10.1186/1471-2105-10-430},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GerlachJTGS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GesslerSMATGN09,
author = {Damian Gessler and
Gary S. Schiltz and
Gregory D. May and
Shulamit Avraham and
Christopher D. Town and
David M. Grant and
Rex T. Nelson},
title = {{SSWAP:} {A} Simple Semantic Web Architecture and Protocol for semantic
web services},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {309},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-309},
doi = {10.1186/1471-2105-10-309},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GesslerSMATGN09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GiardAGM09,
author = {Joachim Giard and
J{\'{e}}r{\^{o}}me Ambroise and
Jean{-}Luc Gala and
Beno{\^{\i}}t Macq},
title = {Regression applied to protein binding site prediction and comparison
with classification},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {276},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-276},
doi = {10.1186/1471-2105-10-276},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GiardAGM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GillespieMJ09,
author = {Joel Gillespie and
Martin Mayne and
Minghui Jiang},
title = {{RNA} folding on the 3D triangular lattice},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {369},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-369},
doi = {10.1186/1471-2105-10-369},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GillespieMJ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GillisP09,
author = {Jesse A. Gillis and
Paul Pavlidis},
title = {A methodology for the analysis of differential coexpression across
the human lifespan},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {306},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-306},
doi = {10.1186/1471-2105-10-306},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GillisP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GlaabGK09,
author = {Enrico Glaab and
Jonathan M. Garibaldi and
Natalio Krasnogor},
title = {ArrayMining: a modular web-application for microarray analysis combining
ensemble and consensus methods with cross-study normalization},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {358},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-358},
doi = {10.1186/1471-2105-10-358},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GlaabGK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GlatignyDTFAM09,
author = {Annie Glatigny and
Herv{\'{e}} Delacroix and
Thomas Tang and
Nicolas Fran{\c{c}}ois and
Lawrence Aggerbeck and
Marie{-}H{\'{e}}l{\`{e}}ne Mucchielli{-}Giorgi},
title = {Characterisation and correction of signal fluctuations in successive
acquisitions of microarray images},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-98},
doi = {10.1186/1471-2105-10-98},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GlatignyDTFAM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Glez-PenaADF09,
author = {Daniel Glez{-}Pe{\~{n}}a and
Rodrigo {\'{A}}lvarez and
Fernando D{\'{\i}}az and
Florentino Fdez{-}Riverola},
title = {{DFP:} a Bioconductor package for fuzzy profile identification and
gene reduction of microarray data},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-37},
doi = {10.1186/1471-2105-10-37},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Glez-PenaADF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Glez-PenaDHCF09,
author = {Daniel Glez{-}Pe{\~{n}}a and
Fernando D{\'{\i}}az and
Jes{\'{u}}s M. Hern{\'{a}}ndez and
Juan M. Corchado and
Florentino Fdez{-}Riverola},
title = {geneCBR: a translational tool for multiple-microarray analysis and
integrative information retrieval for aiding diagnosis in cancer research},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-187},
doi = {10.1186/1471-2105-10-187},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Glez-PenaDHCF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GohY09,
author = {Liang Goh and
Von Bing Yap},
title = {Effects of normalization on quantitative traits in association test},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {415},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-415},
doi = {10.1186/1471-2105-10-415},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GohY09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GoldsteinZVKHLEBC09,
author = {Pavle Goldstein and
Jurica Zucko and
Dusica Vujaklija and
Anita Krisko and
Daslav Hranueli and
Paul F. Long and
Catherine Etchebest and
Bojan Basrak and
John Cullum},
title = {Clustering of protein domains for functional and evolutionary studies},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {335},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-335},
doi = {10.1186/1471-2105-10-335},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GoldsteinZVKHLEBC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GoltsevP09,
author = {Yury Goltsev and
Dmitri A. Papatsenko},
title = {Time warping of evolutionary distant temporal gene expression data
based on noise suppression},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {353},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-353},
doi = {10.1186/1471-2105-10-353},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GoltsevP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GonzalezSEPCEA09,
author = {Juan R. Gonz{\'{a}}lez and
Isaac Subirana and
Ge{\`{o}}rgia Escaram{\'{\i}}s and
Solymar Peraza and
Alejandro C{\'{a}}ceres and
Xavier Estivill and
Llu{\'{\i}}s Armengol},
title = {Accounting for uncertainty when assessing association between copy
number and disease: a latent class model},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-172},
doi = {10.1186/1471-2105-10-172},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/GonzalezSEPCEA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GoodTW09,
author = {Benjamin M. Good and
Joseph T. Tennis and
Mark D. Wilkinson},
title = {Social tagging in the life sciences: characterizing a new metadata
resource for bioinformatics},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {313},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-313},
doi = {10.1186/1471-2105-10-313},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GoodTW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GordonZ09,
author = {Derek Gordon and
Andrew R. Zinn},
title = {Computing power of quantitative trait locus association mapping for
haploid loci},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {261},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-261},
doi = {10.1186/1471-2105-10-261},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GordonZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GouretTP09,
author = {Philippe Gouret and
Julie Dawn Thompson and
Pierre Pontarotti},
title = {PhyloPattern: regular expressions to identify complex patterns in
phylogenetic trees},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {298},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-298},
doi = {10.1186/1471-2105-10-298},
timestamp = {Wed, 12 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/GouretTP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GowrisankarJ09,
author = {Sivakumar Gowrisankar and
Anil G. Jegga},
title = {Regression based predictor for p53 transactivation},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-215},
doi = {10.1186/1471-2105-10-215},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GowrisankarJ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GreenKA09,
author = {James R. Green and
Michael J. Korenberg and
Mohammed O. Aboul{-}Magd},
title = {{PCI-SS:} {MISO} dynamic nonlinear protein secondary structure prediction},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-222},
doi = {10.1186/1471-2105-10-222},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GreenKA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GuanZHBWGMF09,
author = {Wei Guan and
Manshui Zhou and
Christina Y. Hampton and
Benedict B. Benigno and
L. DeEtte Walker and
Alexander G. Gray and
John F. McDonald and
Facundo M. Fern{\'{a}}ndez},
title = {Ovarian cancer detection from metabolomic liquid chromatography/mass
spectrometry data by support vector machines},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {259},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-259},
doi = {10.1186/1471-2105-10-259},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GuanZHBWGMF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GuedjRCN09,
author = {Micka{\"{e}}l Guedj and
St{\'{e}}phane Robin and
Alain Celisse and
Gr{\'{e}}gory Nuel},
title = {Kerfdr: a semi-parametric kernel-based approach to local false discovery
rate estimation},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-84},
doi = {10.1186/1471-2105-10-84},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GuedjRCN09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Guillen-GosalbezS09,
author = {Gonzalo Guill{\'{e}}n{-}Gos{\'{a}}lbez and
Albert Sorribas},
title = {Identifying quantitative operation principles in metabolic pathways:
a systematic method for searching feasible enzyme activity patterns
leading to cellular adaptive responses},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {386},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-386},
doi = {10.1186/1471-2105-10-386},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Guillen-GosalbezS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GuillouxST09,
author = {Vincent Le Guilloux and
Peter Schmidtke and
Pierre Tuff{\'{e}}ry},
title = {Fpocket: An open source platform for ligand pocket detection},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-168},
doi = {10.1186/1471-2105-10-168},
timestamp = {Mon, 26 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/GuillouxST09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GuoLCZD09,
author = {Yan{-}Fang Guo and
Jian Li and
Yuan Chen and
Li{-}Shu Zhang and
Hong{-}Wen Deng},
title = {A new permutation strategy of pathway-based approach for genome-wide
association study},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {429},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-429},
doi = {10.1186/1471-2105-10-429},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GuoLCZD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HackenbergLM09,
author = {Michael Hackenberg and
Gorka Lasso and
Rune Matthiesen},
title = {ContDist: a tool for the analysis of quantitative gene and promoter
properties},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-7},
doi = {10.1186/1471-2105-10-7},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HackenbergLM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HackstadtH09,
author = {Amber J. Hackstadt and
Ann M. Hess},
title = {Filtering for increased power for microarray data analysis},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-11},
doi = {10.1186/1471-2105-10-11},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HackstadtH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HahneLBEHSSSG09,
author = {Florian Hahne and
Nolwenn LeMeur and
Ryan Remy Brinkman and
Byron Ellis and
Perry Haaland and
Deepayan Sarkar and
Josef Spidlen and
Errol Strain and
Robert Gentleman},
title = {flowCore: a Bioconductor package for high throughput flow cytometry},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-106},
doi = {10.1186/1471-2105-10-106},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HahneLBEHSSSG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HamiltonWKT09,
author = {Nicholas A. Hamilton and
Jack T. H. Wang and
Markus C. Kerr and
Rohan D. Teasdale},
title = {Statistical and visual differentiation of subcellular imaging},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-94},
doi = {10.1186/1471-2105-10-94},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HamiltonWKT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HanZ09,
author = {Leng Han and
Zhongming Zhao},
title = {CpG islands or CpG clusters: how to identify functional GC-rich regions
in a genome?},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-65},
doi = {10.1186/1471-2105-10-65},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HanZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HanZ09a,
author = {Mira V. Han and
Christian M. Zmasek},
title = {phyloXML: {XML} for evolutionary biology and comparative genomics},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {356},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-356},
doi = {10.1186/1471-2105-10-356},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HanZ09a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HanZNF09,
author = {Pengfei Han and
Xiuzhen Zhang and
Raymond S. Norton and
Zhi{-}Ping Feng},
title = {Large-scale prediction of long disordered regions in proteins using
random forests},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-8},
doi = {10.1186/1471-2105-10-8},
timestamp = {Mon, 20 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HanZNF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HarelISSDSL09,
author = {Arye Harel and
Aron Inger and
Gil Stelzer and
Liora Strichman{-}Almashanu and
Irina Dalah and
Marilyn Safran and
Doron Lancet},
title = {GIFtS: annotation landscape analysis with GeneCards},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {348},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-348},
doi = {10.1186/1471-2105-10-348},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HarelISSDSL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HariharanSB09,
author = {Manoj Hariharan and
Vinod Scaria and
Samir K. Brahmachari},
title = {dbSMR: a novel resource of genome-wide SNPs affecting microRNA mediated
regulation},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-108},
doi = {10.1186/1471-2105-10-108},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HariharanSB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HartungKGR09,
author = {Michael Hartung and
Toralf Kirsten and
Anika Gro{\ss} and
Erhard Rahm},
title = {OnEX: Exploring changes in life science ontologies},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-250},
doi = {10.1186/1471-2105-10-250},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HartungKGR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HasegawaSSMRT09,
author = {Naoki Hasegawa and
Wataru Sugiura and
Junko Shibata and
Masakazu Matsuda and
Fengrong Ren and
Hiroshi Tanaka},
title = {Inferring within-patient {HIV-1} evolutionary dynamics under anti-HIV
therapy using serial virus samples with vSPA},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {360},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-360},
doi = {10.1186/1471-2105-10-360},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HasegawaSSMRT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HashimotoNKM09,
author = {Tatsunori B. Hashimoto and
Masao Nagasaki and
Kaname Kojima and
Satoru Miyano},
title = {{BFL:} a node and edge betweenness based fast layout algorithm for
large scale networks},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-19},
doi = {10.1186/1471-2105-10-19},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HashimotoNKM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HeBWMZTU09,
author = {Ji He and
Vagner A. Benedito and
Mingyi Wang and
Jeremy D. Murray and
Patrick Xuechun Zhao and
Yuhong Tang and
Michael K. Udvardi},
title = {The \emph{Medicago truncatula }gene expression atlas web server},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {441},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-441},
doi = {10.1186/1471-2105-10-441},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HeBWMZTU09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HeckerGETG09,
author = {Michael Hecker and
Robert Hermann Goertsches and
Robby Engelmann and
Hans{-}J{\"{u}}rgen Thiesen and
Reinhard Guthke},
title = {Integrative modeling of transcriptional regulation in response to
antirheumatic therapy},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {262},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-262},
doi = {10.1186/1471-2105-10-262},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HeckerGETG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HellesF09,
author = {Glennie Helles and
Rasmus Fonseca},
title = {Predicting dihedral angle probability distributions for protein coil
residues from primary sequence using neural networks},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {338},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-338},
doi = {10.1186/1471-2105-10-338},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HellesF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HeltNEBBCHL09,
author = {Gregg A. Helt and
John W. Nicol and
Ed Erwin and
Eric Blossom and
Steven G. Blanchard Jr. and
Stephen A. Chervitz and
Cyrus L. Harmon and
Ann E. Loraine},
title = {Genoviz Software Development Kit: Java tool kit for building genomics
visualization applications},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {266},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-266},
doi = {10.1186/1471-2105-10-266},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HeltNEBBCHL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HennetinPB09,
author = {J{\'{e}}r{\^{o}}me Hennetin and
Petri Pehkonen and
Michel Bellis},
title = {Construction and use of gene expression covariation matrix},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-214},
doi = {10.1186/1471-2105-10-214},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HennetinPB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HirmajerBB09,
author = {Tom{\'{a}}s Hirmajer and
Eva Balsa{-}Canto and
Julio R. Banga},
title = {DOTcvpSB, a software toolbox for dynamic optimization in systems biology},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-199},
doi = {10.1186/1471-2105-10-199},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HirmajerBB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HoehndorfKH09,
author = {Robert Hoehndorf and
Janet Kelso and
Heinrich Herre},
title = {The ontology of biological sequences},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {377},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-377},
doi = {10.1186/1471-2105-10-377},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HoehndorfKH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HomerMN09,
author = {Nils Homer and
Barry Merriman and
Stanley F. Nelson},
title = {Local alignment of two-base encoded {DNA} sequence},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-175},
doi = {10.1186/1471-2105-10-175},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HomerMN09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HoreshWLZU09,
author = {Yair Horesh and
Ydo Wexler and
Ilana Lebenthal and
Michal Ziv{-}Ukelson and
Ron Unger},
title = {RNAslider: a faster engine for consecutive windows folding and its
application to the analysis of genomic folding asymmetry},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-76},
doi = {10.1186/1471-2105-10-76},
timestamp = {Sun, 12 Feb 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HoreshWLZU09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HowardSH09,
author = {Brian E. Howard and
Beate Sick and
Steffen Heber},
title = {Unsupervised assessment of microarray data quality using a Gaussian
mixture model},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-191},
doi = {10.1186/1471-2105-10-191},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HowardSH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuQGKY09,
author = {Rui Hu and
Xing Qiu and
Galina V. Glazko and
Lev Klebanov and
Andrei Yakovlev},
title = {Detecting intergene correlation changes in microarray analysis: a
new approach to gene selection},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-20},
doi = {10.1186/1471-2105-10-20},
timestamp = {Wed, 11 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HuQGKY09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuertaCPRQ09,
author = {Mario Huerta and
Juan Cedano and
Dario Pe{\~{n}}a and
Antonio Rodriguez and
Enrique Querol},
title = {PCOPGene-Net: Holistic Characterisation of cellular states from microarray
data based on continuous and non-continuous analysis of gene-expression
relationships},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-138},
doi = {10.1186/1471-2105-10-138},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HuertaCPRQ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuttenhowerMT09,
author = {Curtis Huttenhower and
Sajid O. Mehmood and
Olga G. Troyanskaya},
title = {Graphle: Interactive exploration of large, dense graphs},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {417},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-417},
doi = {10.1186/1471-2105-10-417},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HuttenhowerMT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HwangP09,
author = {Taeyoung Hwang and
Taesung Park},
title = {Identification of differentially expressed subnetworks based on multivariate
{ANOVA}},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-128},
doi = {10.1186/1471-2105-10-128},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HwangP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/IhekwabaNP09,
author = {Adaoha E. C. Ihekwaba and
Phuong T. Nguyen and
Corrado Priami},
title = {Elucidation of functional consequences of signalling pathway interactions},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {370},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-370},
doi = {10.1186/1471-2105-10-370},
timestamp = {Tue, 02 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/IhekwabaNP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/IntarapanichSAWNCPT09,
author = {Apichart Intarapanich and
Philip James Shaw and
Anunchai Assawamakin and
Pongsakorn Wangkumhang and
Chumpol Ngamphiw and
Kridsadakorn Chaichoompu and
Jittima Piriyapongsa and
Sissades Tongsima},
title = {Iterative pruning {PCA} improves resolution of highly structured populations},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {382},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-382},
doi = {10.1186/1471-2105-10-382},
timestamp = {Mon, 28 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/IntarapanichSAWNCPT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Izquierdo-GarciaRKVBDR09,
author = {Jose L. Izquierdo{-}Garc{\'{\i}}a and
Ignacio Rodr{\'{\i}}guez and
Angelos Kyriazis and
Palmira Villa and
Pilar Barreiro and
Manuel Desco and
Jes{\'{u}}s Ruiz{-}Cabello},
title = {A novel R-package graphic user interface for the analysis of metabonomic
profiles},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {363},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-363},
doi = {10.1186/1471-2105-10-363},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Izquierdo-GarciaRKVBDR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JainBDPRSMMG09,
author = {Eric Jain and
Amos Bairoch and
Severine Duvaud and
Isabelle Phan and
Nicole Redaschi and
Baris E. Suzek and
Maria Jesus Martin and
Peter B. McGarvey and
Elisabeth Gasteiger},
title = {Infrastructure for the life sciences: design and implementation of
the UniProt website},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-136},
doi = {10.1186/1471-2105-10-136},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/JainBDPRSMMG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JaitlyMLAAS09,
author = {Navdeep Jaitly and
Anoop M. Mayampurath and
Kyle Littlefield and
Joshua N. Adkins and
Gordon A. Anderson and
Richard D. Smith},
title = {Decon2LS: An open-source software package for automated processing
and visualization of high resolution mass spectrometry data},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-87},
doi = {10.1186/1471-2105-10-87},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JaitlyMLAAS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JamesonTAKRSGSOWKP09,
author = {Daniel Jameson and
David A. Turner and
John Ankers and
Stephnie Kennedy and
Sheila Ryan and
Neil Swainston and
Tony Griffiths and
David G. Spiller and
Stephen G. Oliver and
Michael R. H. White and
Douglas B. Kell and
Norman W. Paton},
title = {Information management for high content live cell imaging},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-226},
doi = {10.1186/1471-2105-10-226},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JamesonTAKRSGSOWKP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JansenDHS09,
author = {Jeroen J. Jansen and
Nicole M. van Dam and
Huub C. J. Hoefsloot and
Age K. Smilde},
title = {Crossfit analysis: a novel method to characterize the dynamics of
induced plant responses},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {425},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-425},
doi = {10.1186/1471-2105-10-425},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/JansenDHS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JeffriesAJ09,
author = {David J. Jeffries and
Neil Abernethy and
Bouke C. de Jong},
title = {Supervised learning for the automated transcription of spacer classification
from spoligotype films},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-248},
doi = {10.1186/1471-2105-10-248},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JeffriesAJ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JeffriesWPW09,
author = {Clark D. Jeffries and
William O. Ward and
Diana O. Perkins and
Fred A. Wright},
title = {Discovering collectively informative descriptors from high-throughput
experiments},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {431},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-431},
doi = {10.1186/1471-2105-10-431},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/JeffriesWPW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JensenSW09,
author = {Shane T. Jensen and
Sameer Soi and
Li{-}San Wang},
title = {A Bayesian approach to efficient differential allocation for resampling-based
significance testing},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-198},
doi = {10.1186/1471-2105-10-198},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JensenSW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JiLZKY09,
author = {Shuiwang Ji and
Ying{-}Xin Li and
Zhi{-}Hua Zhou and
Sudhir Kumar and
Jieping Ye},
title = {A bag-of-words approach for \emph{Drosophila }gene expression pattern
annotation},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-119},
doi = {10.1186/1471-2105-10-119},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JiLZKY09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JonnalagaddaS09,
author = {Sudhakar Jonnalagadda and
Rajagopalan Srinivasan},
title = {{NIFTI:} An evolutionary approach for finding number of clusters in
microarray data},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-40},
doi = {10.1186/1471-2105-10-40},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JonnalagaddaS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JossKLPGSDB09,
author = {Michael J. Joss and
Jeremy E. Koenig and
Maurizio Labbate and
Martin F. Polz and
Michael R. Gillings and
Harold W. Stokes and
W. Ford Doolittle and
Yan Boucher},
title = {{ACID:} annotation of cassette and integron data},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-118},
doi = {10.1186/1471-2105-10-118},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/JossKLPGSDB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JungSGFL09,
author = {Sin{-}Ho Jung and
Insuk Sohn and
Stephen L. George and
Liping Feng and
Phyllis C. Leppert},
title = {Sample size calculation for microarray experiments with blocked one-way
design},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-164},
doi = {10.1186/1471-2105-10-164},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JungSGFL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JupiterCV09,
author = {Daniel Jupiter and
Hailin Chen and
Vincent VanBuren},
title = {{STARNET} 2: a web-based tool for accelerating discovery of gene regulatory
networks using microarray co-expression data},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {332},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-332},
doi = {10.1186/1471-2105-10-332},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JupiterCV09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KabiljoCS09,
author = {Renata Kabiljo and
Andrew B. Clegg and
Adrian J. Shepherd},
title = {A realistic assessment of methods for extracting gene/protein interactions
from free text},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-233},
doi = {10.1186/1471-2105-10-233},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KabiljoCS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KaczanowskiSZ09,
author = {Szymon Kaczanowski and
Pawel Siedlecki and
Piotr Zielenkiewicz},
title = {The High Throughput Sequence Annotation Service {(HT-SAS)} - the shortcut
from sequence to true Medline words},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-148},
doi = {10.1186/1471-2105-10-148},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/KaczanowskiSZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KaeverLFGFM09,
author = {Alexander Kaever and
Thomas Lingner and
Kirstin Feussner and
Cornelia G{\"{o}}bel and
Ivo Feussner and
Peter Meinicke},
title = {MarVis: a tool for clustering and visualization of metabolic biomarkers},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-92},
doi = {10.1186/1471-2105-10-92},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KaeverLFGFM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KalininaGR09,
author = {Olga V. Kalinina and
Mikhail S. Gelfand and
Robert B. Russell},
title = {Combining specificity determining and conserved residues improves
functional site prediction},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-174},
doi = {10.1186/1471-2105-10-174},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KalininaGR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KashaniAENAAMSM09,
author = {Zahra Razaghi Moghadam Kashani and
Hayedeh Ahrabian and
Elahe Elahi and
Abbas Nowzari{-}Dalini and
Elnaz Saberi Ansari and
Sahar Asadi and
Shahin Mohammadi and
Falk Schreiber and
Ali Masoudi{-}Nejad},
title = {Kavosh: a new algorithm for finding network motifs},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {318},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-318},
doi = {10.1186/1471-2105-10-318},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/KashaniAENAAMSM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KatanforoushSPE09,
author = {Ali Katanforoush and
Mehdi Sadeghi and
Hamid Pezeshk and
Elahe Elahi},
title = {Global haplotype partitioning for maximal associated {SNP} pairs},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {269},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-269},
doi = {10.1186/1471-2105-10-269},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/KatanforoushSPE09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KawajiHD09,
author = {Hideya Kawaji and
Yoshihide Hayashizaki and
Carsten O. Daub},
title = {{SDRF2GRAPH} - a visualization tool of a spreadsheet-based description
of experimental processes},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-133},
doi = {10.1186/1471-2105-10-133},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KawajiHD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KellerFB09,
author = {Mikaela Keller and
Clark C. Freifeld and
John S. Brownstein},
title = {Automated vocabulary discovery for geo-parsing online epidemic intelligence},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {385},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-385},
doi = {10.1186/1471-2105-10-385},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KellerFB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Kim09,
author = {Seon{-}Young Kim},
title = {Effects of sample size on robustness and prediction accuracy of a
prognostic gene signature},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-147},
doi = {10.1186/1471-2105-10-147},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Kim09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KimKAN09,
author = {Eun{-}Youn Kim and
Seon{-}Young Kim and
Daniel A. Ashlock and
Dougu Nam},
title = {{MULTI-K:} accurate classification of microarray subtypes using ensemble
k-means clustering},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {260},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-260},
doi = {10.1186/1471-2105-10-260},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KimKAN09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KimSPSP09,
author = {Yohan Kim and
John Sidney and
Clemencia Pinilla and
Alessandro Sette and
Bj{\"{o}}rn Peters},
title = {Derivation of an amino acid similarity matrix for peptide: {MHC} binding
and its application as a Bayesian prior},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {394},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-394},
doi = {10.1186/1471-2105-10-394},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KimSPSP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KimTL09,
author = {Changhoon Kim and
Chin{-}Hsien Tai and
Byungkook Lee},
title = {Iterative refinement of structure-based sequence alignments by Seed
Extension},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-210},
doi = {10.1186/1471-2105-10-210},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KimTL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KislyukBDW09,
author = {Andrey Kislyuk and
Srijak Bhatnagar and
Jonathan Dushoff and
Joshua S. Weitz},
title = {Unsupervised statistical clustering of environmental shotgun sequences},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {316},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-316},
doi = {10.1186/1471-2105-10-316},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/KislyukBDW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KlammerMSS09,
author = {Martin Klammer and
David N. Messina and
Thomas Schmitt and
Erik L. L. Sonnhammer},
title = {MetaTM - a consensus method for transmembrane protein topology prediction},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {314},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-314},
doi = {10.1186/1471-2105-10-314},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KlammerMSS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KlamtK09,
author = {Steffen Klamt and
Axel von Kamp},
title = {Computing paths and cycles in biological interaction graphs},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-181},
doi = {10.1186/1471-2105-10-181},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KlamtK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KleinRKBTHD09,
author = {Hans{-}Ulrich Klein and
Christian Ruckert and
Alexander Kohlmann and
Lars Bullinger and
Christian Thiede and
Torsten Haferlach and
Martin Dugas},
title = {Quantitative comparison of microarray experiments with published leukemia
related gene expression signatures},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {422},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-422},
doi = {10.1186/1471-2105-10-422},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/KleinRKBTHD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Klinke09,
author = {David J. Klinke II},
title = {An empirical Bayesian approach for model-based inference of cellular
signaling networks},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {371},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-371},
doi = {10.1186/1471-2105-10-371},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Klinke09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KnollHWMP09,
author = {Michael Knoll and
Thomas M. Hamm and
Florian Wagner and
Virginia Martinez and
J{\"{u}}rgen Pleiss},
title = {The {PHA} Depolymerase Engineering Database: {A} systematic analysis
tool for the diverse family of polyhydroxyalkanoate {(PHA)} depolymerases},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-89},
doi = {10.1186/1471-2105-10-89},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KnollHWMP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KnottVAT09,
author = {Simon R. V. Knott and
Christopher J. Viggiani and
Oscar M. Aparicio and
Simon Tavar{\'{e}}},
title = {Strategies for analyzing highly enriched IP-chip datasets},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {305},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-305},
doi = {10.1186/1471-2105-10-305},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KnottVAT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KnudsenM09,
author = {Bjarne Knudsen and
Michael M. Miyamoto},
title = {Accurate and fast methods to estimate the population mutation rate
from error prone sequences},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-247},
doi = {10.1186/1471-2105-10-247},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KnudsenM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KoL09,
author = {Seokha Ko and
Hyunju Lee},
title = {Integrative approaches to the prediction of protein functions based
on the feature selection},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {455},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-455},
doi = {10.1186/1471-2105-10-455},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KoL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KoVW09,
author = {Chih{-}Lung Ko and
Eberhard O. Voit and
Feng{-}Sheng Wang},
title = {Estimating parameters for generalized mass action models with connectivity
information},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-140},
doi = {10.1186/1471-2105-10-140},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KoVW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KoflerTLS09,
author = {Robert Kofler and
Tatiana Teixeira Torres and
Tamas Lelley and
Christian Schl{\"{o}}tterer},
title = {PanGEA: Identification of allele specific gene expression using the
454 technology},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-143},
doi = {10.1186/1471-2105-10-143},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KoflerTLS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KomorowskiFHR09,
author = {Michal Komorowski and
B{\"{a}}rbel Finkenst{\"{a}}dt and
Claire V. Harper and
David A. Rand},
title = {Bayesian inference of biochemical kinetic parameters using the linear
noise approximation},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {343},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-343},
doi = {10.1186/1471-2105-10-343},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KomorowskiFHR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KorhonenSSS09,
author = {Anna Korhonen and
Ilona Silins and
Lin Sun and
Ulla Stenius},
title = {The first step in the development of text mining technology for cancer
risk assessment: identifying and organizing scientific evidence in
risk assessment literature},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {303},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-303},
doi = {10.1186/1471-2105-10-303},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KorhonenSSS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KountourisH09,
author = {Petros Kountouris and
Jonathan D. Hirst},
title = {Prediction of backbone dihedral angles and protein secondary structure
using support vector machines},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {437},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-437},
doi = {10.1186/1471-2105-10-437},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KountourisH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KoussounadisRJ09,
author = {Antonis Koussounadis and
Oliver Redfern and
David T. Jones},
title = {Improving classification in protein structure databases using text
mining},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-129},
doi = {10.1186/1471-2105-10-129},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KoussounadisRJ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KraemerBGHLMPF09,
author = {Lars Kraemer and
B{\'{a}}nk Beszteri and
Steffi G{\"{a}}bler{-}Schwarz and
Christoph Held and
Florian Leese and
Christoph Mayer and
Kevin P{\"{o}}hlmann and
Stephan Frickenhaus},
title = {{STAMP:} Extensions to the {STADEN} sequence analysis package for
high throughput interactive microsatellite marker design},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-41},
doi = {10.1186/1471-2105-10-41},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KraemerBGHLMPF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KramerSB09,
author = {Nicole Kr{\"{a}}mer and
Juliane Sch{\"{a}}fer and
Anne{-}Laure Boulesteix},
title = {Regularized estimation of large-scale gene association networks using
graphical Gaussian models},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {384},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-384},
doi = {10.1186/1471-2105-10-384},
timestamp = {Wed, 28 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KramerSB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KumarR09,
author = {Manish Kumar and
Gajendra P. S. Raghava},
title = {Prediction of nuclear proteins using {SVM} and {HMM} models},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-22},
doi = {10.1186/1471-2105-10-22},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KumarR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KumarSOERMBBS09,
author = {Surendra Kumar and
{\AA}smund Skj{\ae}veland and
Russell J. S. Orr and
P{\aa}l Enger and
Torgeir Ruden and
Bj{\o}rn{-}Helge Mevik and
Fabien Burki and
Andreas Botnen and
Kamran Shalchian{-}Tabrizi},
title = {{AIR:} {A} batch-oriented web program package for construction of
supermatrices ready for phylogenomic analyses},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {357},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-357},
doi = {10.1186/1471-2105-10-357},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/KumarSOERMBBS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KummerfeldT09,
author = {Sarah K. Kummerfeld and
Sarah A. Teichmann},
title = {Protein domain organisation: adding order},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-39},
doi = {10.1186/1471-2105-10-39},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KummerfeldT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LawrenceDMBCZ09,
author = {Robert Lawrence and
Aaron G. Day{-}Williams and
Richard Mott and
John Broxholme and
Lon R. Cardon and
Eleftheria Zeggini},
title = {{GLIDERS} - {A} web-based search engine for genome-wide linkage disequilibrium
between HapMap SNPs},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {367},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-367},
doi = {10.1186/1471-2105-10-367},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LawrenceDMBCZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LeaderM09,
author = {David P. Leader and
E. James Milner{-}White},
title = {Motivated Proteins: {A} web application for studying small three-dimensional
protein motifs},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-60},
doi = {10.1186/1471-2105-10-60},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LeaderM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LeeCCYHTLWKH09,
author = {Sheng{-}An Lee and
Chen{-}hsiung Chan and
Tzu{-}Chi Chen and
Chia{-}Ying Yang and
Kuo{-}Chuan Huang and
Chi{-}Hung Tsai and
Jin{-}Mei Lai and
Feng{-}Sheng Wang and
Cheng{-}Yan Kao and
Chi{-}Ying F. Huang},
title = {POINeT: protein interactome with sub-network analysis and hub prioritization},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-114},
doi = {10.1186/1471-2105-10-114},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LeeCCYHTLWKH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LeeK09,
author = {Mikyung Lee and
Yangseok Kim},
title = {{CHESS} (CgHExpreSS): {A} comprehensive analysis tool for the analysis
of genomic alterations and their effects on the expression profile
of the genome},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {424},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-424},
doi = {10.1186/1471-2105-10-424},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LeeK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LemeyLMM09,
author = {Philippe Lemey and
Martin Lott and
Darren P. Martin and
Vincent Moulton},
title = {Identifying recombinants in human and primate immunodeficiency virus
sequence alignments using quartet scanning},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-126},
doi = {10.1186/1471-2105-10-126},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LemeyLMM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Li09,
author = {Weizhong Li},
title = {Analysis and comparison of very large metagenomes with fast clustering
and functional annotation},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {359},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-359},
doi = {10.1186/1471-2105-10-359},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Li09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiBUZ09,
author = {Haiquan Li and
Vagner A. Benedito and
Michael K. Udvardi and
Patrick Xuechun Zhao},
title = {TransportTP: {A} two-phase classification approach for membrane transporter
prediction and characterization},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {418},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-418},
doi = {10.1186/1471-2105-10-418},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiBUZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiLY09,
author = {Yanpeng Li and
Hongfei Lin and
Zhihao Yang},
title = {Incorporating rich background knowledge for gene named entity classification
and recognition},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-223},
doi = {10.1186/1471-2105-10-223},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiLY09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiLZSD09,
author = {Chao Li and
Yuhua Li and
Xiangmin Zhang and
Phillip Stafford and
Valentin Dinu},
title = {ICRPfinder: a fast pattern design algorithm for coding sequences and
its application in finding potential restriction enzyme recognition
sites},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {286},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-286},
doi = {10.1186/1471-2105-10-286},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiLZSD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiR09,
author = {Qingbo Li and
Bryan A. P. Roxas},
title = {An assessment of false discovery rates and statistical significance
in label-free quantitative proteomics with combined filters},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-43},
doi = {10.1186/1471-2105-10-43},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiSVFBJ09,
author = {Yang Li and
Morris A. Swertz and
Gonzalo Vera and
Jingyuan Fu and
Rainer Breitling and
Ritsert C. Jansen},
title = {designGG: an R-package and web tool for the optimal design of genetical
genomics experiments},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-188},
doi = {10.1186/1471-2105-10-188},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiSVFBJ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiUZGS09,
author = {Michael H. T. Li and
Peter M. U. Ung and
James Zajkowski and
Sylvie Garneau{-}Tsodikova and
David H. Sherman},
title = {Automated genome mining for natural products},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-185},
doi = {10.1186/1471-2105-10-185},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiUZGS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiZZLKLWJ09,
author = {Honglin Li and
Hailei Zhang and
Mingyue Zheng and
Jie Luo and
Ling Kang and
Xiaofeng Liu and
Xicheng Wang and
Hualiang Jiang},
title = {An effective docking strategy for virtual screening based on multi-objective
optimization algorithm},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-58},
doi = {10.1186/1471-2105-10-58},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiZZLKLWJ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiangSLMGBD09,
author = {Chunguang Liang and
Alexander Schmid and
Mar{\'{\i}}a Jos{\'{e}} L{\'{o}}pez{-}S{\'{a}}nchez and
Andr{\'{e}}s Moya and
Roy Gross and
J{\"{o}}rg Bernhardt and
Thomas Dandekar},
title = {{JANE:} efficient mapping of prokaryotic ESTs and variable length
sequence reads on related template genomes},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {391},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-391},
doi = {10.1186/1471-2105-10-391},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LiangSLMGBD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiangWL09,
author = {Kuo{-}ching Liang and
Xiaodong Wang and
Ta{-}Hsin Li},
title = {Robust discovery of periodically expressed genes using the laplace
periodogram},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-15},
doi = {10.1186/1471-2105-10-15},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiangWL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiangZZZ09,
author = {Shide Liang and
Dandan Zheng and
Chi Zhang and
Martin Zacharias},
title = {Prediction of antigenic epitopes on protein surfaces by consensus
scoring},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {302},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-302},
doi = {10.1186/1471-2105-10-302},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiangZZZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Lin09,
author = {Jimmy Lin},
title = {Is searching full text more effective than searching abstracts?},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-46},
doi = {10.1186/1471-2105-10-46},
timestamp = {Fri, 27 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/Lin09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LinAMCPNG09,
author = {Xue Lin and
Bahman Afsari and
Luigi Marchionni and
Leslie Cope and
Giovanni Parmigiani and
Daniel Q. Naiman and
Donald Geman},
title = {The ordering of expression among a few genes can provide simple cancer
biomarkers and signal {BRCA1} mutations},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-256},
doi = {10.1186/1471-2105-10-256},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LinAMCPNG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LinCLS09,
author = {Frank P. Y. Lin and
Enrico W. Coiera and
Ruiting Lan and
Vitali Sintchenko},
title = {In silico prioritisation of candidate genes for prokaryotic gene function
discovery: an application of phylogenetic profiles},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-86},
doi = {10.1186/1471-2105-10-86},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LinCLS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LinLL09,
author = {Ying Chih Lin and
Chun{-}Yuan Lin and
Chunhung Richard Lin},
title = {Sorting by reversals and block-interchanges with various weight assignments},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {398},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-398},
doi = {10.1186/1471-2105-10-398},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LinLL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiseAPJ09,
author = {Stefano Lise and
C{\'{e}}dric Archambeau and
Massimiliano Pontil and
David T. Jones},
title = {Prediction of hot spot residues at protein-protein interfaces by combining
machine learning and energy-based methods},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {365},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-365},
doi = {10.1186/1471-2105-10-365},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiseAPJ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuBOWLJ09,
author = {Xiaofeng Liu and
Fang Bai and
Sisheng Ouyang and
Xicheng Wang and
Honglin Li and
Hualiang Jiang},
title = {Cyndi: a multi-objective evolution algorithm based method for bioactive
molecular conformational generation},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-101},
doi = {10.1186/1471-2105-10-101},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuBOWLJ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuCCTLPCKHLJLCH09,
author = {Li{-}Yu Daisy Liu and
Chien{-}Yu Chen and
Mei{-}Ju May Chen and
Ming{-}Shian Tsai and
Cho{-}Han S. Lee and
Tzu L. Phang and
Li{-}Yun Chang and
Wen{-}Hung Kuo and
Hsiao{-}Lin Hwa and
Huang{-}Chun Lien and
Shih{-}Ming Jung and
Yi{-}Shing Lin and
King{-}Jen Chang and
Fon{-}Jou Hsieh},
title = {Statistical identification of gene association by {CID} in application
of constructing {ER} regulatory network},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-85},
doi = {10.1186/1471-2105-10-85},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuCCTLPCKHLJLCH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuFR09,
author = {Yu{-}Shen Liu and
Yi Fang and
Karthik Ramani},
title = {Using least median of squares for structural superposition of flexible
proteins},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-29},
doi = {10.1186/1471-2105-10-29},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuFR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuFR09a,
author = {Yu{-}Shen Liu and
Yi Fang and
Karthik Ramani},
title = {{IDSS:} deformation invariant signatures for molecular shape comparison},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-157},
doi = {10.1186/1471-2105-10-157},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuFR09a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuHLWYX09,
author = {Qi Liu and
Jinling Huang and
Huiqing Liu and
Ping Wan and
Xiuzi Ye and
Ying Xu},
title = {Analyses of domains and domain fusions in human proto-oncogenes},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-88},
doi = {10.1186/1471-2105-10-88},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuHLWYX09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuLSZ09,
author = {Tianqing Liu and
Nan Lin and
Ningzhong Shi and
Baoxue Zhang},
title = {Information criterion-based clustering with order-restricted candidate
profiles in short time-course microarray experiments},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-146},
doi = {10.1186/1471-2105-10-146},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuLSZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuLTLGG09,
author = {Bing Liu and
Jiuyong Li and
Anna Tsykin and
Lin Liu and
Arti B. Gaur and
Gregory J. Goodall},
title = {Exploring complex miRNA-mRNA interactions with Bayesian networks by
splitting-averaging strategy},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {408},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-408},
doi = {10.1186/1471-2105-10-408},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuLTLGG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuWLTDW09,
author = {Bin Liu and
Xiaolong Wang and
Lei Lin and
Buzhou Tang and
Qiwen Dong and
Xuan Wang},
title = {Prediction of protein binding sites in protein structures using hidden
Markov support vector machine},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {381},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-381},
doi = {10.1186/1471-2105-10-381},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuWLTDW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LoHBG09,
author = {Kenneth Lo and
Florian Hahne and
Ryan Remy Brinkman and
Raphael Gottardo},
title = {flowClust: a Bioconductor package for automated gating of flow cytometry
data},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-145},
doi = {10.1186/1471-2105-10-145},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LoHBG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LoevenichBKDSAH09,
author = {Sandra N. Loevenich and
Erich Brunner and
Nichole L. King and
Eric W. Deutsch and
Stephen E. Stein and
Ruedi Aebersold and
Ernst Hafen},
title = {The Drosophila melanogaster PeptideAtlas facilitates the use of peptide
data for improved fly proteomics and genome annotation},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-59},
doi = {10.1186/1471-2105-10-59},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LoevenichBKDSAH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LopesMC09,
author = {Fabr{\'{\i}}cio Martins Lopes and
David Correa Martins Jr. and
Roberto Marcondes Cesar Junior},
title = {Feature selection environment for genomic applications},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {285},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-285},
doi = {10.1186/1471-2105-10-285},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LopesMC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LuoFSHW09,
author = {Weijun Luo and
Michael S. Friedman and
Kerby Shedden and
Kurt D. Hankenson and
Peter J. Woolf},
title = {{GAGE:} generally applicable gene set enrichment for pathway analysis},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-161},
doi = {10.1186/1471-2105-10-161},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LuoFSHW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MaH09,
author = {Shuangge Ma and
Jian Huang},
title = {Regularized gene selection in cancer microarray meta-analysis},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-1},
doi = {10.1186/1471-2105-10-1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MaH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MacPhersonPR09,
author = {Jamie I. MacPherson and
John W. Pinney and
David L. Robertson},
title = {JNets: Exploring networks by integrating annotation},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-95},
doi = {10.1186/1471-2105-10-95},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MacPhersonPR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MacropolCS09,
author = {Kathy Macropol and
Tolga Can and
Ambuj K. Singh},
title = {{RRW:} repeated random walks on genome-scale protein networks for
local cluster discovery},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {283},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-283},
doi = {10.1186/1471-2105-10-283},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MacropolCS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MaetschkeY09,
author = {Stefan Maetschke and
Zheng Yuan},
title = {Exploiting structural and topological information to improve prediction
of RNA-protein binding sites},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {341},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-341},
doi = {10.1186/1471-2105-10-341},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MaetschkeY09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MaierLHG09,
author = {Christopher W. Maier and
Jeffrey G. Long and
Bradley M. Hemminger and
Morgan C. Giddings},
title = {Ultra-Structure database design methodology for managing systems biology
data and analyses},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-254},
doi = {10.1186/1471-2105-10-254},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MaierLHG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MalliosOA09,
author = {Ronna R. Mallios and
David M. Ojcius and
David H. Ardell},
title = {An iterative strategy combining biophysical criteria and duration
hidden Markov models for structural predictions of \emph{Chlamydia
trachomatis }sigma\({}^{\mbox{66 }}\)promoters},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {271},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-271},
doi = {10.1186/1471-2105-10-271},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MalliosOA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ManningHMD09,
author = {Jonathan R. Manning and
Ann Hedley and
John J. Mullins and
Donald R. Dunbar},
title = {Automated seeding of specialised wiki knowledgebases with BioKb},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {291},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-291},
doi = {10.1186/1471-2105-10-291},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ManningHMD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MaoHDD09,
author = {Linyong Mao and
John L. Van Hemert and
Sudhansu Dash and
Julie A. Dickerson},
title = {\emph{Arabidopsis }gene co-expression network and its functional modules},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {346},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-346},
doi = {10.1186/1471-2105-10-346},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MaoHDD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MarKSIHSHQ09,
author = {Jessica Cara Mar and
Yasumasa Kimura and
Kate Schroder and
Katharine M. Irvine and
Yoshihide Hayashizaki and
Harukazu Suzuki and
David A. Hume and
John Quackenbush},
title = {Data-driven normalization strategies for high-throughput quantitative
{RT-PCR}},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-110},
doi = {10.1186/1471-2105-10-110},
timestamp = {Tue, 21 Feb 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MarKSIHSHQ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MaragkakisAPRDGGKKSSVKSTH09,
author = {Manolis Maragkakis and
Panagiotis Alexiou and
Giorgos L. Papadopoulos and
Martin Reczko and
Theodore Dalamagas and
Giorgos Giannopoulos and
George I. Goumas and
Evangelos Koukis and
Kornilios Kourtis and
Victor A. Simossis and
Praveen Sethupathy and
Thanasis Vergoulis and
Nectarios Koziris and
Timos K. Sellis and
Panayotis Tsanakas and
Artemis G. Hatzigeorgiou},
title = {Accurate microRNA target prediction correlates with protein repression
levels},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {295},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-295},
doi = {10.1186/1471-2105-10-295},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/MaragkakisAPRDGGKKSSVKSTH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Martin-RequenaMCT09,
author = {Victoria Martin{-}Requena and
Antonio Mu{\~{n}}oz{-}Merida and
M. Gonzalo Claros and
Oswaldo Trelles},
title = {PreP+07: improvements of a user friendly tool to preprocess and analyse
microarray data},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-16},
doi = {10.1186/1471-2105-10-16},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Martin-RequenaMCT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MarttinenMC09,
author = {Pekka Marttinen and
Samuel Myllykangas and
Jukka Corander},
title = {Bayesian clustering and feature selection for cancer tissue samples},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-90},
doi = {10.1186/1471-2105-10-90},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MarttinenMC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MasciADLMSSC09,
author = {Anna Maria Masci and
Cecilia N. Arighi and
Alexander D. Diehl and
Anne E. Lieberman and
Chris Mungall and
Richard H. Scheuermann and
Barry Smith and
Lindsay G. Cowell},
title = {An improved ontological representation of dendritic cells as a paradigm
for all cell types},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-70},
doi = {10.1186/1471-2105-10-70},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MasciADLMSSC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MatsunagaYTM09,
author = {Tsutomu Matsunaga and
Chikara Yonemori and
Etsuji Tomita and
Masaaki Muramatsu},
title = {Clique-based data mining for related genes in a biomedical database},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-205},
doi = {10.1186/1471-2105-10-205},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MatsunagaYTM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MaulikMB09,
author = {Ujjwal Maulik and
Anirban Mukhopadhyay and
Sanghamitra Bandyopadhyay},
title = {Combining Pareto-optimal clusters using supervised learning for identifying
co-expressed genes},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-27},
doi = {10.1186/1471-2105-10-27},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MaulikMB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MazurRRK09,
author = {Johanna Mazur and
Daniel Ritter and
Gerhard Reinelt and
Lars Kaderali},
title = {Reconstructing nonlinear dynamic models of gene regulation using stochastic
sampling},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {448},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-448},
doi = {10.1186/1471-2105-10-448},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MazurRRK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/McIntoshC09,
author = {Tara McIntosh and
James R. Curran},
title = {Challenges for automatically extracting molecular interactions from
full-text articles},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {311},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-311},
doi = {10.1186/1471-2105-10-311},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/McIntoshC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MeeusGT09,
author = {Thierry De Mee{\^{u}}s and
Jean{-}Fran{\c{c}}ois Gu{\'{e}}gan and
Anatoly T. Teriokhin},
title = {MultiTest V.1.2, a program to binomially combine independent tests
and performance comparison with other related methods on proportional
data},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {443},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-443},
doi = {10.1186/1471-2105-10-443},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MeeusGT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MenezesBSOB09,
author = {Ren{\'{e}}e X. de Menezes and
Marten Boetzer and
Melle Sieswerda and
Gert{-}Jan B. van Ommen and
Judith M. Boer},
title = {Integrated analysis of {DNA} copy number and gene expression microarray
data using gene sets},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-203},
doi = {10.1186/1471-2105-10-203},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/MenezesBSOB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MengYCFL09,
author = {Yan A. Meng and
Yi Yu and
L. Adrienne Cupples and
Lindsay A. Farrer and
Kathryn L. Lunetta},
title = {Performance of random forest when SNPs are in linkage disequilibrium},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-78},
doi = {10.1186/1471-2105-10-78},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MengYCFL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MenzeKMHBPH09,
author = {Bjoern H. Menze and
B. Michael Kelm and
Ralf Masuch and
Uwe Himmelreich and
Peter Bachert and
Wolfgang Petrich and
Fred A. Hamprecht},
title = {A comparison of random forest and its Gini importance with standard
chemometric methods for the feature selection and classification of
spectral data},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-213},
doi = {10.1186/1471-2105-10-213},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MenzeKMHBPH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MercadeEAASM09,
author = {Jaume Mercad{\'{e}} and
Antonio Espinosa and
Jos{\'{e}}{-}Enrique Adsuara and
Rosa Adrados and
Jordi Segura and
Tamara Maes},
title = {Orymold: ontology based gene expression data integration and analysis
tool applied to rice},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-158},
doi = {10.1186/1471-2105-10-158},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/MercadeEAASM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MiziantyK09,
author = {Marcin J. Mizianty and
Lukasz A. Kurgan},
title = {Modular prediction of protein structural classes from sequences of
twilight-zone identity with predicting sequences},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {414},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-414},
doi = {10.1186/1471-2105-10-414},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MiziantyK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MonteiroDBMPFJ09,
author = {Pedro T. Monteiro and
Estelle Dumas and
Bruno Besson and
Radu Mateescu and
Michel Page and
Ana T. Freitas and
Hidde de Jong},
title = {A service-oriented architecture for integrating the modeling and formal
verification of genetic regulatory networks},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {450},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-450},
doi = {10.1186/1471-2105-10-450},
timestamp = {Thu, 04 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/MonteiroDBMPFJ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MorganellaZC09,
author = {Sandro Morganella and
Pietro Zoppoli and
Michele Ceccarelli},
title = {{IRIS:} a method for reverse engineering of regulatory relations in
gene networks},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {444},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-444},
doi = {10.1186/1471-2105-10-444},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MorganellaZC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MoutselosKCMK09,
author = {Konstantinos Moutselos and
Ioannis Kanaris and
Aristotelis Chatziioannou and
Ilias Maglogiannis and
Fragiskos N. Kolisis},
title = {KEGGconverter: a tool for the in-silico modelling of metabolic networks
of the {KEGG} Pathways database},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {324},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-324},
doi = {10.1186/1471-2105-10-324},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/MoutselosKCMK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MuldersBC09,
author = {Geert C. W. M. Mulders and
Gerard T. Barkema and
Enrico Carlon},
title = {Inverse Langmuir method for oligonucleotide microarray analysis},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-64},
doi = {10.1186/1471-2105-10-64},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MuldersBC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MurieWLN09,
author = {Carl Murie and
Owen Z. Woody and
Anna Y. Lee and
Robert Nadon},
title = {Comparison of small n statistical tests of differential expression
applied to microarrays},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-45},
doi = {10.1186/1471-2105-10-45},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MurieWLN09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/NachmanR09,
author = {Iftach Nachman and
Aviv Regev},
title = {{BRNI:} Modular analysis of transcriptional regulatory programs},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-155},
doi = {10.1186/1471-2105-10-155},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/NachmanR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/NaitoYMU09,
author = {Yuki Naito and
Jun Yoshimura and
Shinichi Morishita and
Kumiko Ui{-}Tei},
title = {siDirect 2.0: updated software for designing functional siRNA with
reduced seed-dependent off-target effect},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {392},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-392},
doi = {10.1186/1471-2105-10-392},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/NaitoYMU09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/NeroKKTC09,
author = {Damion Nero and
Manpreet S. Katari and
Jonathan Kelfer and
Daniel Tranchina and
Gloria M. Coruzzi},
title = {\emph{In Silico }Evaluation of Predicted Regulatory Interactions in
\emph{Arabidopsis thaliana}},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {435},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-435},
doi = {10.1186/1471-2105-10-435},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/NeroKKTC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Newberg09,
author = {Lee Aaron Newberg},
title = {Error statistics of hidden Markov model and hidden Boltzmann model
results},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-212},
doi = {10.1186/1471-2105-10-212},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Newberg09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/NgVFCZPC09,
author = {Man{-}Ping Ng and
Ismael A. Vergara and
Christian Frech and
Qingkang Chen and
Xinghuo Zeng and
Jian Pei and
Nansheng Chen},
title = {OrthoClusterDB: an online platform for synteny blocks},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-192},
doi = {10.1186/1471-2105-10-192},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/NgVFCZPC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/NguyenL09,
author = {Van Hoa Nguyen and
Dominique Lavenier},
title = {{PLAST:} parallel local alignment search tool for database comparison},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {329},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-329},
doi = {10.1186/1471-2105-10-329},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/NguyenL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/NielsenL09,
author = {Morten Nielsen and
Ole Lund},
title = {\emph{NN-align}. An artificial neural network-based alignment algorithm
for {MHC} class {II} peptide binding prediction},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {296},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-296},
doi = {10.1186/1471-2105-10-296},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/NielsenL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/NiidaSIAZA09,
author = {Atsushi Niida and
Andrew D. Smith and
Seiya Imoto and
Hiroyuki Aburatani and
Michael Q. Zhang and
Tetsu Akiyama},
title = {Gene set-based module discovery in the breast cancer transcriptome},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-71},
doi = {10.1186/1471-2105-10-71},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/NiidaSIAZA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/NilssonBT09,
author = {Roland Nilsson and
Johan Bj{\"{o}}rkegren and
Jesper Tegn{\'{e}}r},
title = {On reliable discovery of molecular signatures},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-38},
doi = {10.1186/1471-2105-10-38},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/NilssonBT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/NugentJ09,
author = {Timothy Nugent and
David T. Jones},
title = {Transmembrane protein topology prediction using support vector machines},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-159},
doi = {10.1186/1471-2105-10-159},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/NugentJ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/NuzzoR09,
author = {Angelo Nuzzo and
Alberto Riva},
title = {Genephony: a knowledge management tool for genome-wide research},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {278},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-278},
doi = {10.1186/1471-2105-10-278},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/NuzzoR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PabingerTSERT09,
author = {Stephan Pabinger and
Gerhard G. Thallinger and
Ren{\'{e}} Snajder and
Heiko Eichhorn and
Robert Rader and
Zlatko Trajanoski},
title = {{QPCR:} Application for real-time {PCR} data management and analysis},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {268},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-268},
doi = {10.1186/1471-2105-10-268},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PabingerTSERT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PalBRC09,
author = {Arumay Pal and
Ranjit Prasad Bahadur and
Partha Sarathi Ray and
Pinak Chakrabarti},
title = {Accessibility and partner number of protein residues, their relationship
and a webserver, ContPlot for their display},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-103},
doi = {10.1186/1471-2105-10-103},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PalBRC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PandeyMK09,
author = {Gaurav Pandey and
Chad L. Myers and
Vipin Kumar},
title = {Incorporating functional inter-relationships into protein function
prediction algorithms},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-142},
doi = {10.1186/1471-2105-10-142},
timestamp = {Fri, 29 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/PandeyMK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PapanicolaouSfH09,
author = {Alexie Papanicolaou and
Remo Stierli and
Richard H. ffrench{-}Constant and
David G. Heckel},
title = {Next generation transcriptomes for next generation genomes using \emph{est2assembly}},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {447},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-447},
doi = {10.1186/1471-2105-10-447},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PapanicolaouSfH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ParikhAFCWBZM09,
author = {Jignesh R. Parikh and
Manor Askenazi and
Scott B. Ficarro and
Tanya Cashorali and
James T. Webber and
Nathaniel C. Blank and
Yi Zhang and
Jarrod A. Marto},
title = {multiplierz: an extensible {API} based desktop environment for proteomics
data analysis},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {364},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-364},
doi = {10.1186/1471-2105-10-364},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ParikhAFCWBZM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Park09,
author = {Yungki Park},
title = {Critical assessment of sequence-based protein-protein interaction
prediction methods that do not require homologous protein sequences},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {419},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-419},
doi = {10.1186/1471-2105-10-419},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Park09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ParkRGKK09,
author = {Sung{-}Hee Park and
Jos{\'{e}} A. Reyes and
David R. Gilbert and
Ji Woong Kim and
Sangsoo Kim},
title = {Prediction of protein-protein interaction types using association
rule based classification},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-36},
doi = {10.1186/1471-2105-10-36},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ParkRGKK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PatersonL09,
author = {Trevor Paterson and
Andy Law},
title = {An {XML} transfer schema for exchange of genomic and genetic mapping
data: implementation as a web service in a Taverna workflow},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-252},
doi = {10.1186/1471-2105-10-252},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PatersonL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PearsonLSMLR09,
author = {Richard D. Pearson and
Xuejun Liu and
Guido Sanguinetti and
Marta Milo and
Neil D. Lawrence and
Magnus Rattray},
title = {puma: a Bioconductor package for propagating uncertainty in microarray
analysis},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-211},
doi = {10.1186/1471-2105-10-211},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/PearsonLSMLR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PeddadaUH09,
author = {Shyamal D. Peddada and
David M. Umbach and
Shawn F. Harris},
title = {A response to information criterion-based clustering with order-restricted
candidate profiles in short time-course microarray experiments},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {438},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-438},
doi = {10.1186/1471-2105-10-438},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PeddadaUH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PercudaniP09,
author = {Riccardo Percudani and
Alessio Peracchi},
title = {The {B6} database: a tool for the description and classification of
vitamin B6-dependent enzymatic activities and of the corresponding
protein families},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {273},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-273},
doi = {10.1186/1471-2105-10-273},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PercudaniP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PhillippyDZS09,
author = {Adam M. Phillippy and
Xiangyu Deng and
Wei Zhang and
Steven L. Salzberg},
title = {Efficient oligonucleotide probe selection for pan-genomic tiling arrays},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {293},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-293},
doi = {10.1186/1471-2105-10-293},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PhillippyDZS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PiedadeTE09,
author = {Isabelle da Piedade and
Man{-}Hung Eric Tang and
Olivier Elemento},
title = {{DISPARE:} DIScriminative PAttern REfinement for Position Weight Matrices},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {388},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-388},
doi = {10.1186/1471-2105-10-388},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PiedadeTE09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PihurDD09,
author = {Vasyl Pihur and
Susmita Datta and
Somnath Datta},
title = {RankAggreg, an {R} package for weighted rank aggregation},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-62},
doi = {10.1186/1471-2105-10-62},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PihurDD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PinheiroGSZS09,
author = {Daniel Guariz Pinheiro and
Pedro A. F. Galante and
Sandro J. de Souza and
Marco A. Zago and
Wilson A. Silva Jr.},
title = {A score system for quality evaluation of {RNA} sequence tags: an improvement
for gene expression profiling},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-170},
doi = {10.1186/1471-2105-10-170},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/PinheiroGSZS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PinhoFGR09,
author = {Armando J. Pinho and
Paulo Jorge S. G. Ferreira and
Sara P. Garcia and
Jo{\~{a}}o M. O. S. Rodrigues},
title = {On finding minimal absent words},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-137},
doi = {10.1186/1471-2105-10-137},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PinhoFGR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Poleksic09,
author = {Aleksandar Poleksic},
title = {Island method for estimating the statistical significance of profile-profile
alignment scores},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-112},
doi = {10.1186/1471-2105-10-112},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Poleksic09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PopoviciGAJDW09,
author = {Vlad Popovici and
Darlene R. Goldstein and
Janine Antonov and
Rolf Jaggi and
Mauro Delorenzi and
Pratyaksha Wirapati},
title = {Selecting control genes for {RT-QPCR} using public microarray data},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-42},
doi = {10.1186/1471-2105-10-42},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PopoviciGAJDW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PrevitiHZV09,
author = {Christopher Previti and
Oscar Harari and
Igor Zwir and
Coral del Val},
title = {Profile analysis and prediction of tissue-specific CpG island methylation
classes},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-116},
doi = {10.1186/1471-2105-10-116},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PrevitiHZV09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/QiDHB09,
author = {Feng Qi and
Ranjan K. Dash and
Yu Han and
Daniel A. Beard},
title = {Generating rate equations for complex enzyme systems by a computer-assisted
systematic method},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-238},
doi = {10.1186/1471-2105-10-238},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/QiDHB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/QianTSWGJMSSB09,
author = {Yu Qian and
Olga Tchuvatkina and
Josef Spidlen and
Peter Wilkinson and
Maura Gasparetto and
Andrew R. Jones and
Frank J. Manion and
Richard H. Scheuermann and
Rafick{-}Pierre Sekaly and
Ryan Remy Brinkman},
title = {FuGEFlow: data model and markup language for flow cytometry},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-184},
doi = {10.1186/1471-2105-10-184},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/QianTSWGJMSSB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/QuintusSGPT09,
author = {Flavien Quintus and
Olivier Sperandio and
Julien Grynberg and
Michel Petitjean and
Pierre Tuff{\'{e}}ry},
title = {Ligand scaffold hopping combining 3D maximal substructure search and
molecular similarity},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-245},
doi = {10.1186/1471-2105-10-245},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/QuintusSGPT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RamanaG09,
author = {Jayashree Ramana and
Dinesh Gupta},
title = {LipocalinPred: a SVM-based method for prediction of lipocalins},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {445},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-445},
doi = {10.1186/1471-2105-10-445},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RamanaG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RancoitaHBK09,
author = {Paola M. V. Rancoita and
Marcus Hutter and
Francesco Bertoni and
Ivo Kwee},
title = {Bayesian {DNA} copy number analysis},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-10},
doi = {10.1186/1471-2105-10-10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RancoitaHBK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RangwalaKK09,
author = {Huzefa Rangwala and
Christopher Kauffman and
George Karypis},
title = {\emph{svm}PRAT: SVM-based Protein Residue Annotation Toolkit},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {439},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-439},
doi = {10.1186/1471-2105-10-439},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/RangwalaKK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RascolLCGGDP09,
author = {Virginie Lopez Rascol and
Anthony Levasseur and
Olivier Chabrol and
Simona Grusea and
Philippe Gouret and
Etienne G. J. Danchin and
Pierre Pontarotti},
title = {{CASSIOPE:} An expert system for conserved regions searches},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {284},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-284},
doi = {10.1186/1471-2105-10-284},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/RascolLCGGDP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RePH09,
author = {Matteo Re and
Graziano Pesole and
David Stephen Horner},
title = {Accurate discrimination of conserved coding and non-coding regions
through multiple indicators of evolutionary dynamics},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {282},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-282},
doi = {10.1186/1471-2105-10-282},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RePH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ReidOW09,
author = {John E. Reid and
Sascha Ott and
Lorenz Wernisch},
title = {Transcriptional programs: Modelling higher order structure in transcriptional
control},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-218},
doi = {10.1186/1471-2105-10-218},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ReidOW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Restrepo-MontoyaVNOPP09,
author = {Daniel Restrepo{-}Montoya and
Carolina Vizca{\'{\i}}no and
Luis F. Ni{\~{n}}o and
Marisol Ocampo and
Manuel{-}Elkin Patarroyo and
Manuel A. Patarroyo},
title = {Validating subcellular localization prediction tools with mycobacterial
proteins},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-134},
doi = {10.1186/1471-2105-10-134},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Restrepo-MontoyaVNOPP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RileyYSL09,
author = {Todd Riley and
Xin Yu and
Eduardo D. Sontag and
Arnold Levine},
title = {The p53HMM algorithm: using profile hidden markov models to detect
p53-responsive genes},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-111},
doi = {10.1186/1471-2105-10-111},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RileyYSL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RiosKT09,
author = {Javier R{\'{\i}}os and
Tor Johan Mikael Karlsson and
Oswaldo Trelles},
title = {Magallanes: a web services discovery and automatic workflow composition
tool},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {334},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-334},
doi = {10.1186/1471-2105-10-334},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RiosKT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RobinsonS09,
author = {Mark D. Robinson and
Terence P. Speed},
title = {Differential splicing using whole-transcript microarrays},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-156},
doi = {10.1186/1471-2105-10-156},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RobinsonS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RognvaldssonEYGJL09,
author = {Thorsteinn S. R{\"{o}}gnvaldsson and
Terence A. Etchells and
Liwen You and
Daniel Garwicz and
Ian H. Jarman and
Paulo J. G. Lisboa},
title = {How to find simple and accurate rules for viral protease cleavage
specificities},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-149},
doi = {10.1186/1471-2105-10-149},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RognvaldssonEYGJL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RotPCKSZ09,
author = {Gregor Rot and
Anup Parikh and
Tomaz Curk and
Adam Kuspa and
Gad Shaulsky and
Blaz Zupan},
title = {dictyExpress: a \emph{Dictyostelium discoideum }gene expression database
with an explorative data analysis web-based interface},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {265},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-265},
doi = {10.1186/1471-2105-10-265},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RotPCKSZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RothGD09,
author = {Alexander C. J. Roth and
Gaston H. Gonnet and
Christophe Dessimoz},
title = {Algorithm of {OMA} for large-scale orthology inference},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-220},
doi = {10.1186/1471-2105-10-220},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RothGD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Ruano-RubioPT09,
author = {Valent{\'{\i}}n Ruano{-}Rubio and
Olivier Poch and
Julie Dawn Thompson},
title = {Comparison of eukaryotic phylogenetic profiling approaches using species
tree aware methods},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {383},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-383},
doi = {10.1186/1471-2105-10-383},
timestamp = {Wed, 12 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/Ruano-RubioPT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Rubin09,
author = {Robert A. Rubin},
title = {A first principles approach to differential expression in microarray
data analysis},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {292},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-292},
doi = {10.1186/1471-2105-10-292},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Rubin09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RubinsteinMMP09,
author = {Nimrod D. Rubinstein and
Itay Mayrose and
Eric Martz and
Tal Pupko},
title = {Epitopia: a web-server for predicting B-cell epitopes},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {287},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-287},
doi = {10.1186/1471-2105-10-287},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RubinsteinMMP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RuedaD09,
author = {Oscar M. Rueda and
Ram{\'{o}}n D{\'{\i}}az{-}Uriarte},
title = {Detection of recurrent copy number alterations in the genome: taking
among-subject heterogeneity seriously},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {308},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-308},
doi = {10.1186/1471-2105-10-308},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RuedaD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SacanFF09,
author = {Ahmet Sacan and
Nilgun Ferhatosmanoglu and
Hakan Ferhatosmanoglu},
title = {MicroarrayDesigner: an online search tool and repository for near-optimal
microarray experimental designs},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {304},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-304},
doi = {10.1186/1471-2105-10-304},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SacanFF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SadreyevWG09,
author = {Ruslan Sadreyev and
Yong Wang and
Nick V. Grishin},
title = {Considering scores between unrelated proteins in the search database
improves profile comparison},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {399},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-399},
doi = {10.1186/1471-2105-10-399},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SadreyevWG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SampsonZ09,
author = {Joshua N. Sampson and
Hongyu Zhao},
title = {Genotyping and inflated type {I} error rate in genome-wide association
case/control studies},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-68},
doi = {10.1186/1471-2105-10-68},
timestamp = {Thu, 28 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SampsonZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SavageHXGTGDW09,
author = {Richard S. Savage and
Katherine A. Heller and
Yang Xu and
Zoubin Ghahramani and
William M. Truman and
Murray Grant and
Katherine J. Denby and
David L. Wild},
title = {{R/BHC:} fast Bayesian hierarchical clustering for microarray data},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-242},
doi = {10.1186/1471-2105-10-242},
timestamp = {Wed, 13 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SavageHXGTGDW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ScalabrinMP09,
author = {Simone Scalabrin and
Michele Morgante and
Alberto Policriti},
title = {Automated FingerPrint Background removal: {FPB}},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-127},
doi = {10.1186/1471-2105-10-127},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ScalabrinMP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ScharlVL09,
author = {Theresa Scharl and
Ingo Voglhuber and
Friedrich Leisch},
title = {Exploratory and inferential analysis of gene cluster neighborhood
graphs},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {288},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-288},
doi = {10.1186/1471-2105-10-288},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ScharlVL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SchoberSLKLMTRS09,
author = {Daniel Schober and
Barry Smith and
Suzanna E. Lewis and
Waclaw Kusnierczyk and
Jane Lomax and
Chris Mungall and
Chris F. Taylor and
Philippe Rocca{-}Serra and
Susanna{-}Assunta Sansone},
title = {Survey-based naming conventions for use in {OBO} Foundry ontology
development},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-125},
doi = {10.1186/1471-2105-10-125},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SchoberSLKLMTRS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SchonherrWCSKB09,
author = {Sebastian Sch{\"{o}}nherr and
Hansi Wei{\ss}ensteiner and
Stefan Coassin and
G{\"{u}}nther Specht and
Florian Kronenberg and
Anita Brandst{\"{a}}tter},
title = {eCOMPAGT - efficient Combination and Management of Phenotypes and
Genotypes for Genetic Epidemiology},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-139},
doi = {10.1186/1471-2105-10-139},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SchonherrWCSKB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SchreiberDMW09,
author = {Falk Schreiber and
Tim Dwyer and
Kim Marriott and
Michael Wybrow},
title = {A generic algorithm for layout of biological networks},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {375},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-375},
doi = {10.1186/1471-2105-10-375},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SchreiberDMW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SchreiberPEWM09,
author = {Fabian Schreiber and
Kerstin Pick and
Dirk Erpenbeck and
Gert W{\"{o}}rheide and
Burkhard Morgenstern},
title = {OrthoSelect: a protocol for selecting orthologous groups in phylogenomics},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-219},
doi = {10.1186/1471-2105-10-219},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SchreiberPEWM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SchulzBK09,
author = {Marvin Schulz and
Barbara M. Bakker and
Edda Klipp},
title = {TIde: a software for the systematic scanning of drug targets in kinetic
network models},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {344},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-344},
doi = {10.1186/1471-2105-10-344},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SchulzBK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SchwackeHKCS09,
author = {John Schwacke and
Elizabeth G. Hill and
Edward L. Krug and
Susana Comte{-}Walters and
Kevin L. Schey},
title = {iQuantitator: {A} tool for protein expression inference using iTRAQ},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {342},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-342},
doi = {10.1186/1471-2105-10-342},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SchwackeHKCS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SchwagerAWH09,
author = {Christian Schwager and
Amir Abdollahi and
Ute Wirkner and
Peter Huber},
title = {TableButler - {A} tool for combining, handling and processing of huge
data tables},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-235},
doi = {10.1186/1471-2105-10-235},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SchwagerAWH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SeamanS09,
author = {Josiah D. Seaman and
John C. Sanford},
title = {Skittle: {A} 2-Dimensional Genome Visualization Tool},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {452},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-452},
doi = {10.1186/1471-2105-10-452},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SeamanS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SelpiBKSKS09,
author = {Selpi and
Christopher H. Bryant and
Graham J. L. Kemp and
Janeli Sarv and
Erik Kristiansson and
Per Sunnerhagen},
title = {Predicting functional upstream open reading frames in \emph{Saccharomyces
cerevisiae}},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {451},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-451},
doi = {10.1186/1471-2105-10-451},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SelpiBKSKS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SennelsBR09,
author = {Lau Sennels and
Jimi{-}Carlo Bukowski{-}Wills and
Juri Rappsilber},
title = {Improved results in proteomics by use of local and peptide-class specific
false discovery rates},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-179},
doi = {10.1186/1471-2105-10-179},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SennelsBR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ShahP09,
author = {Sonia H. Shah and
Jacqueline A. Pallas},
title = {Identifying differential exon splicing using linear models and correlation
coefficients},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-26},
doi = {10.1186/1471-2105-10-26},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ShahP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ShahTMW09,
author = {Abhik Shah and
Toyoaki Tenzen and
Andrew P. McMahon and
Peter J. Woolf},
title = {Using mechanistic Bayesian networks to identify downstream targets
of the Sonic Hedgehog pathway},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {433},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-433},
doi = {10.1186/1471-2105-10-433},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ShahTMW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SheHW09,
author = {Yiyuan She and
Earl Hubbell and
Hui Wang},
title = {Resolving deconvolution ambiguity in gene alternative splicing},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-237},
doi = {10.1186/1471-2105-10-237},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SheHW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ShiBRGS09,
author = {Wei Shi and
Ashish Banerjee and
Matthew E. Ritchie and
Steve Gerondakis and
Gordon K. Smyth},
title = {Illumina {WG-6} BeadChip strips should be normalized separately},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {372},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-372},
doi = {10.1186/1471-2105-10-372},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ShiBRGS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ShimMY09,
author = {Byonghyo Shim and
Hyeyoung Min and
Sungroh Yoon},
title = {Nonlinear preprocessing method for detecting peaks from gas chromatograms},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {378},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-378},
doi = {10.1186/1471-2105-10-378},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ShimMY09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ShuNBZW09,
author = {Wenjie Shu and
Ming Ni and
Xiaochen Bo and
Zhiqiang Zheng and
Shengqi Wang},
title = {EvoRSR: an integrated system for exploring evolution of {RNA} structural
robustness},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-249},
doi = {10.1186/1471-2105-10-249},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ShuNBZW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SidorovRG09,
author = {Igor A. Sidorov and
Denis A. Reshetov and
Alexander E. Gorbalenya},
title = {{SNAD:} Sequence Name Annotation-based Designer},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-251},
doi = {10.1186/1471-2105-10-251},
timestamp = {Tue, 16 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SidorovRG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SinghBBKS09,
author = {Payal Singh and
Pradipta Bandyopadhyay and
Sudha Bhattacharya and
A. Krishnamachari and
Supratim Sengupta},
title = {Riboswitch Detection Using Profile Hidden Markov Models},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {325},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-325},
doi = {10.1186/1471-2105-10-325},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SinghBBKS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SlyszBBDPBS09,
author = {Gordon W. Slysz and
Charles A. H. Baker and
Benjamin M. Bozsa and
Anthony Dang and
Andrew J. Percy and
Melissa Bennett and
David C. Schriemer},
title = {Hydra: software for tailored processing of {H/D} exchange data from
{MS} or tandem {MS} analyses},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-162},
doi = {10.1186/1471-2105-10-162},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SlyszBBDPBS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SnipenNSAN09,
author = {Lars Snipen and
Otto L. Nyquist and
Margrete Solheim and
{\AA}got Aakra and
Ingolf F. Nes},
title = {Improved analysis of bacterial {CGH} data beyond the log-ratio paradigm},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-91},
doi = {10.1186/1471-2105-10-91},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SnipenNSAN09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SohnOGKJ09,
author = {Insuk Sohn and
Kouros Owzar and
Stephen L. George and
Sujong Kim and
Sin{-}Ho Jung},
title = {A permutation-based multiple testing method for time-course microarray
experiments},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {336},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-336},
doi = {10.1186/1471-2105-10-336},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SohnOGKJ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SontropMHRV09,
author = {Herman M. J. Sontrop and
Perry D. Moerland and
Ren{\'{e}} van den Ham and
Marcel J. T. Reinders and
Wim F. J. Verhaegh},
title = {A comprehensive sensitivity analysis of microarray breast cancer classification
under feature variability},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {389},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-389},
doi = {10.1186/1471-2105-10-389},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SontropMHRV09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SorzanoMEBHNMC09,
author = {Carlos Oscar S{\'{a}}nchez Sorzano and
C{\'{e}}dric Messaoudi and
Matthias Eibauer and
Jose{-}Roman Bilbao{-}Castro and
Reiner Hegerl and
S. Nickell and
Sergio Marco and
Jos{\'{e}} Mar{\'{\i}}a Carazo},
title = {Marker-free image registration of electron tomography tilt-series},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-124},
doi = {10.1186/1471-2105-10-124},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SorzanoMEBHNMC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SpjuthABEKMTWWSW09,
author = {Ola Spjuth and
Jonathan Alvarsson and
Arvid Berg and
Martin Eklund and
Stefan Kuhn and
Carl M{\"{a}}sak and
Gilleain M. Torrance and
Johannes Wagener and
Egon L. Willighagen and
Christoph Steinbeck and
Jarl E. S. Wikberg},
title = {Bioclipse 2: {A} scriptable integration platform for the life sciences},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {397},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-397},
doi = {10.1186/1471-2105-10-397},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SpjuthABEKMTWWSW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SpyrouSLT09,
author = {Christiana Spyrou and
Rory Stark and
Andy G. Lynch and
Simon Tavar{\'{e}}},
title = {BayesPeak: Bayesian analysis of ChIP-seq data},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {299},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-299},
doi = {10.1186/1471-2105-10-299},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SpyrouSLT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SteinkellnerRTKG09,
author = {Georg Steinkellner and
Robert Rader and
Gerhard G. Thallinger and
Christoph Kratky and
Karl Gruber},
title = {VASCo: computation and visualization of annotated protein surface
contacts},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-32},
doi = {10.1186/1471-2105-10-32},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SteinkellnerRTKG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/StivalaWS09,
author = {Alex D. Stivala and
Anthony Wirth and
Peter J. Stuckey},
title = {Tableau-based protein substructure search using quadratic programming},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-153},
doi = {10.1186/1471-2105-10-153},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/StivalaWS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/StockerFRBKOMT09,
author = {Gernot Stocker and
Maria Fischer and
Dietmar Rieder and
Gabriela Bindea and
Simon Kainz and
Michael Oberstolz and
James G. McNally and
Zlatko Trajanoski},
title = {iLAP: a workflow-driven software for experimental protocol development,
data acquisition and analysis},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {390},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-390},
doi = {10.1186/1471-2105-10-390},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/StockerFRBKOMT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/StokicHT09,
author = {Dejan Stokic and
Rudolf Hanel and
Stefan Thurner},
title = {A fast and efficient gene-network reconstruction method from multiple
over-expression experiments},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-253},
doi = {10.1186/1471-2105-10-253},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/StokicHT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SuZCM09,
author = {Jing Su and
Pedro J. Zapata and
Chien{-}Chiang Chen and
J. Carson Meredith},
title = {Local cell metrics: a novel method for analysis of cell-cell interactions},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {350},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-350},
doi = {10.1186/1471-2105-10-350},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SuZCM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SugayaI09,
author = {Nobuyoshi Sugaya and
Kazuyoshi Ikeda},
title = {Assessing the druggability of protein-protein interactions by a supervised
machine-learning method},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {263},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-263},
doi = {10.1186/1471-2105-10-263},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SugayaI09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SunBPD09,
author = {Wei Sun and
Michael J. Buck and
Mukund Patel and
Ian J. Davis},
title = {Improved ChIP-chip analysis by a mixture model approach},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-173},
doi = {10.1186/1471-2105-10-173},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SunBPD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SunCWZCS09,
author = {Tingzhe Sun and
Chun Chen and
Yuanyuan Wu and
Shuai Zhang and
Jun Cui and
Pingping Shen},
title = {Modeling the role of p53 pulses in {DNA} damage- induced cell death
decision},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-190},
doi = {10.1186/1471-2105-10-190},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SunCWZCS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SunYHL09,
author = {Shuying Sun and
Pearlly Yan and
Tim Hui{-}Ming Huang and
Shili Lin},
title = {Identifying differentially methylated genes using mixed effect and
generalized least square models},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {404},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-404},
doi = {10.1186/1471-2105-10-404},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SunYHL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SuzukiST09,
author = {Haruo Suzuki and
Rintaro Saito and
Masaru Tomita},
title = {Measure of synonymous codon usage diversity among genes in bacteria},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-167},
doi = {10.1186/1471-2105-10-167},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SuzukiST09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TanFRG09,
author = {Niclas Chiang Tan and
Wayne G. Fisher and
Kevin P. Rosenblatt and
Harold R. Garner},
title = {Application of multiple statistical tests to enhance mass spectrometry-based
biomarker discovery},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-144},
doi = {10.1186/1471-2105-10-144},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TanFRG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TanSPLCP09,
author = {Chuen Seng Tan and
Agus Salim and
Alexander Ploner and
Janne Lehti{\"{o}} and
Kee Seng Chia and
Yudi Pawitan},
title = {Correlating gene and protein expression data using Correlated Factor
Analysis},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {272},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-272},
doi = {10.1186/1471-2105-10-272},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TanSPLCP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TannierZS09,
author = {Eric Tannier and
Chunfang Zheng and
David Sankoff},
title = {Multichromosomal median and halving problems under different genomic
distances},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-120},
doi = {10.1186/1471-2105-10-120},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TannierZS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TchagangBMB09,
author = {Alain B. Tchagang and
Kevin V. Bui and
Thomas McGinnis and
Panayiotis V. Benos},
title = {Extracting biologically significant patterns from short time series
gene expression data},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-255},
doi = {10.1186/1471-2105-10-255},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TchagangBMB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TeshimaI09,
author = {Kosuke M. Teshima and
Hideki Innan},
title = {mbs: modifying Hudson's ms software to generate samples of {DNA} sequences
with a biallelic site under selection},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-166},
doi = {10.1186/1471-2105-10-166},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/TeshimaI09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TeuberWSF09,
author = {Markus Teuber and
Michael H. Wenz and
Stefan Schreiber and
Andre Franke},
title = {GMFilter and SXTestPlate: software tools for improving the SNPlex\({}^{\mbox{TM}}\)
genotyping system},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-81},
doi = {10.1186/1471-2105-10-81},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TeuberWSF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ThachukCFDWD09,
author = {Chris Thachuk and
Jose Crossa and
Jorge Franco and
Susanne Dreisigacker and
Marilyn Warburton and
Guy F. Davenport},
title = {Core Hunter: an algorithm for sampling genetic resources based on
multiple genetic measures},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-243},
doi = {10.1186/1471-2105-10-243},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ThachukCFDWD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ThielenHS09,
author = {Bernhard Thielen and
Stephanie Heinen and
Dietmar Schomburg},
title = {mSpecs: a software tool for the administration and editing of mass
spectral libraries in the field of metabolomics},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-229},
doi = {10.1186/1471-2105-10-229},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ThielenHS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ThiemeLNPSO09,
author = {Marian Thieme and
Claudio Lottaz and
Harald Niederst{\"{a}}tter and
Walther Parson and
Rainer Spang and
Peter J. Oefner},
title = {ReseqChip: Automated integration of multiple local context probe data
from the MitoChip array in mitochondrial {DNA} sequence assembly},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {440},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-440},
doi = {10.1186/1471-2105-10-440},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ThiemeLNPSO09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ThissenWBBKKDOS09,
author = {Uwe Thissen and
Suzan Wopereis and
Sjoerd A. A. van den Berg and
Ivana Bobeldijk and
Robert Kleemann and
Teake Kooistra and
Ko Willems van Dijk and
Ben van Ommen and
Age K. Smilde},
title = {Improving the analysis of designed studies by combining statistical
modelling with study design information},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-52},
doi = {10.1186/1471-2105-10-52},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ThissenWBBKKDOS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ThompsonDSW09,
author = {Kevin J. Thompson and
Hrishikesh Deshmukh and
Jeffrey L. Solka and
Jennifer W. Weller},
title = {A white-box approach to microarray probe response characterization:
the BaFL pipeline},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {449},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-449},
doi = {10.1186/1471-2105-10-449},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ThompsonDSW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ThompsonIMA09,
author = {Paul Thompson and
Syed A. Iqbal and
John McNaught and
Sophia Ananiadou},
title = {Construction of an annotated corpus to support biomedical information
extraction},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {349},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-349},
doi = {10.1186/1471-2105-10-349},
timestamp = {Mon, 26 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ThompsonIMA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TilloH09,
author = {Desiree Tillo and
Timothy R. Hughes},
title = {{G+C} content dominates intrinsic nucleosome occupancy},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {442},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-442},
doi = {10.1186/1471-2105-10-442},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TilloH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Tino09,
author = {Peter Ti{\~{n}}o},
title = {Basic properties and information theory of Audic-Claverie statistic
for analyzing cDNA arrays},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {310},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-310},
doi = {10.1186/1471-2105-10-310},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Tino09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TolenoRWIWSH09,
author = {Donna M. Toleno and
Gabriel Renaud and
Tyra G. Wolfsberg and
Munirul Islam and
Derek E. Wildman and
Kimberly D. Siegmund and
Joseph G. Hacia},
title = {Development and evaluation of new mask protocols for gene expression
profiling in humans and chimpanzees},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-77},
doi = {10.1186/1471-2105-10-77},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TolenoRWIWSH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TomovicSO09,
author = {Andrija Tomovic and
Michael B. Stadler and
Edward J. Oakeley},
title = {Transcription factor site dependencies in human, mouse and rat genomes},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {339},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-339},
doi = {10.1186/1471-2105-10-339},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TomovicSO09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ToronenOMH09,
author = {Petri T{\"{o}}r{\"{o}}nen and
Pauli J. Ojala and
Pekka Marttinen and
Liisa Holm},
title = {Robust extraction of functional signals from gene set analysis using
a generalized threshold free scoring function},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {307},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-307},
doi = {10.1186/1471-2105-10-307},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ToronenOMH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ToronenPH09,
author = {Petri T{\"{o}}r{\"{o}}nen and
Petri Pehkonen and
Liisa Holm},
title = {Generation of Gene Ontology benchmark datasets with various types
of positive signal},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {319},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-319},
doi = {10.1186/1471-2105-10-319},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ToronenPH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TorrentNB09,
author = {Marc Torrent and
Vict{\`{o}}ria M. Nogu{\'{e}}s and
Ester Boix},
title = {A theoretical approach to spot active regions in antimicrobial proteins},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {373},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-373},
doi = {10.1186/1471-2105-10-373},
timestamp = {Thu, 29 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/TorrentNB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TritchlerPB09,
author = {David Tritchler and
Elena Parkhomenko and
Joseph Beyene},
title = {Filtering Genes for Cluster and Network Analysis},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-193},
doi = {10.1186/1471-2105-10-193},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TritchlerPB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TsafnatCPSI09,
author = {Guy Tsafnat and
Enrico W. Coiera and
Sally R. Partridge and
Jaron Schaeffer and
Jonathan R. Iredell},
title = {Context-driven discovery of gene cassettes in mobile integrons using
a computational grammar},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {281},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-281},
doi = {10.1186/1471-2105-10-281},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TsafnatCPSI09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TsengT09,
author = {Huei{-}Hun Elizabeth Tseng and
Martin Tompa},
title = {Algorithms for locating extremely conserved elements in multiple sequence
alignments},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {432},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-432},
doi = {10.1186/1471-2105-10-432},
timestamp = {Tue, 26 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/TsengT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Vallon-ChristerssonNSH09,
author = {Johan Vallon{-}Christersson and
Nicklas Nordborg and
Martin Svensson and
Jari H{\"{a}}kkinen},
title = {{BASE} - 2nd generation software for microarray data management and
analysis},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {330},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-330},
doi = {10.1186/1471-2105-10-330},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Vallon-ChristerssonNSH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/VenkatramanYSK09,
author = {Vishwesh Venkatraman and
Yifeng D. Yang and
Lee Sael and
Daisuke Kihara},
title = {Protein-protein docking using region-based 3D Zernike descriptors},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {407},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-407},
doi = {10.1186/1471-2105-10-407},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/VenkatramanYSK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/VerspoorCH09,
author = {Karin Verspoor and
K. Bretonnel Cohen and
Lawrence Hunter},
title = {The textual characteristics of traditional and Open Access scientific
journals are similar},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-183},
doi = {10.1186/1471-2105-10-183},
timestamp = {Thu, 17 Feb 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/VerspoorCH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ViaGGGH09,
author = {Allegra Via and
Cathryn M. Gould and
Christine Gem{\"{u}}nd and
Toby J. Gibson and
Manuela Helmer{-}Citterich},
title = {A structure filter for the Eukaryotic Linear Motif Resource},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {351},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-351},
doi = {10.1186/1471-2105-10-351},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ViaGGGH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/VisneDVLYWNLK09,
author = {Ilhami Visne and
Erkan Dilaveroglu and
Klemens Vierlinger and
Martin Lauss and
Ahmet Yildiz and
Andreas Weinh{\"{a}}usel and
Christa Noehammer and
Friedrich Leisch and
Albert Kriegner},
title = {{RGG:} {A} general {GUI} Framework for {R} scripts},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-74},
doi = {10.1186/1471-2105-10-74},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/VisneDVLYWNLK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/VlasblomW09,
author = {James Vlasblom and
Shoshana J. Wodak},
title = {Markov clustering versus affinity propagation for the partitioning
of protein interaction graphs},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-99},
doi = {10.1186/1471-2105-10-99},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/VlasblomW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/VoevodskiTX09,
author = {Konstantin Voevodski and
Shang{-}Hua Teng and
Yu Xia},
title = {Finding local communities in protein networks},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {297},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-297},
doi = {10.1186/1471-2105-10-297},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/VoevodskiTX09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/VollrathSCB09,
author = {Aaron L. Vollrath and
Adam A. Smith and
Mark Craven and
Christopher A. Bradfield},
title = {EDGE\({}^{\mbox{3}}\): {A} web-based solution for management and analysis
of Agilent two color microarray experiments},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {280},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-280},
doi = {10.1186/1471-2105-10-280},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/VollrathSCB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WaaijenborgZ09,
author = {Sandra Waaijenborg and
Aeilko H. Zwinderman},
title = {Sparse canonical correlation analysis for identifying, connecting
and completing gene-expression networks},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {315},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-315},
doi = {10.1186/1471-2105-10-315},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WaaijenborgZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WagenerSWW09,
author = {Johannes Wagener and
Ola Spjuth and
Egon L. Willighagen and
Jarl E. S. Wikberg},
title = {{XMPP} for cloud computing in bioinformatics supporting discovery
and invocation of asynchronous web services},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {279},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-279},
doi = {10.1186/1471-2105-10-279},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WagenerSWW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WalshMMRVP09,
author = {Ian Walsh and
Alberto J. M. Martin and
Catherine Mooney and
Enrico Rubagotti and
Alessandro Vullo and
Gianluca Pollastri},
title = {Ab initio and homology based prediction of protein domains by recursive
neural networks},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-195},
doi = {10.1186/1471-2105-10-195},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WalshMMRVP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WanYYXTY09,
author = {Xiang Wan and
Can Yang and
Qiang Yang and
Hong Xue and
Nelson L. S. Tang and
Weichuan Yu},
title = {MegaSNPHunter: a learning approach to detect disease predisposition
SNPs and high level interactions in genome wide association study},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-13},
doi = {10.1186/1471-2105-10-13},
timestamp = {Mon, 23 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WanYYXTY09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangKSPT09,
author = {Yue Wang and
Jin{-}Dong Kim and
Rune S{\ae}tre and
Sampo Pyysalo and
Jun'ichi Tsujii},
title = {Investigating heterogeneous protein annotations toward cross-corpora
utilization},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {403},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-403},
doi = {10.1186/1471-2105-10-403},
timestamp = {Tue, 02 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/WangKSPT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangLCLHL09,
author = {Wei{-}Chi Wang and
Feng{-}Mao Lin and
Wen{-}Chi Chang and
Kuan{-}Yu Lin and
Hsien{-}Da Huang and
Na{-}Sheng Lin},
title = {miRExpress: Analyzing high-throughput sequencing data for profiling
microRNA expression},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {328},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-328},
doi = {10.1186/1471-2105-10-328},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WangLCLHL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangLLBW09,
author = {Kai Wang and
Jian Li and
Shengting Li and
Lars Bolund and
Carsten Wiuf},
title = {Estimation of tumor heterogeneity using {CGH} array data},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-12},
doi = {10.1186/1471-2105-10-12},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WangLLBW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangM09,
author = {Junbai Wang and
Morigen},
title = {BayesPI - a new model to study protein-DNA interactions: a case study
of condition-specific protein binding parameters for Yeast transcription
factors},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {345},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-345},
doi = {10.1186/1471-2105-10-345},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/WangM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangNLS09,
author = {Wenhui Wang and
Juan Nunez{-}Iglesias and
Yihui Luan and
Fengzhu Sun},
title = {Usefulness and limitations of dK random graph models to predict interactions
and functional homogeneity in biological networks under a pseudo-likelihood
parameter estimation approach},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {277},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-277},
doi = {10.1186/1471-2105-10-277},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WangNLS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangSCRMQHJX09,
author = {Tao Wang and
Kang Shao and
Qinying Chu and
Yanfei Ren and
Yiming Mu and
Lijia Qu and
Jie He and
Changwen Jin and
Bin Xia},
title = {Automics: an integrated platform for NMR-based metabonomics spectral
processing and data analysis},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-83},
doi = {10.1186/1471-2105-10-83},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WangSCRMQHJX09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangWY09,
author = {Lusheng Wang and
Zhanyong Wang and
Wanling Yang},
title = {Linked region detection using high-density {SNP} genotype data via
the minimum recombinant model of pedigree haplotype inference},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-216},
doi = {10.1186/1471-2105-10-216},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WangWY09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WarrenS09,
author = {Andrew S. Warren and
Jo{\~{a}}o Carlos Setubal},
title = {The Genome Reverse Compiler: an explorative annotation tool},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-35},
doi = {10.1186/1471-2105-10-35},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WarrenS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WeingartLH09,
author = {Uri Weingart and
Yair Lavi and
David Horn},
title = {Data mining of enzymes using specific peptides},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {446},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-446},
doi = {10.1186/1471-2105-10-446},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/WeingartLH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WiegersDCHM09,
author = {Thomas C. Wiegers and
Allan Peter Davis and
K. Bretonnel Cohen and
Lynette Hirschman and
Carolyn J. Mattingly},
title = {Text mining and manual curation of chemical-gene-disease networks
for the Comparative Toxicogenomics Database {(CTD)}},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {326},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-326},
doi = {10.1186/1471-2105-10-326},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WiegersDCHM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WilczynskiDPT09,
author = {Bartek Wilczynski and
Norbert Dojer and
Mateusz Patelak and
Jerzy Tiuryn},
title = {Finding evolutionarily conserved cis-regulatory modules with a universal
set of motifs},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-82},
doi = {10.1186/1471-2105-10-82},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WilczynskiDPT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WongSD09,
author = {Jason W. H. Wong and
Alexander B. Schwahn and
Kevin M. Downard},
title = {{ETISEQ} - an algorithm for automated elution time ion sequencing
of concurrently fragmented peptides for mass spectrometry-based proteomics},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-244},
doi = {10.1186/1471-2105-10-244},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/WongSD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WongsereeAPSLC09,
author = {Waranyu Wongseree and
Anunchai Assawamakin and
Theera Piroonratana and
Saravudh Sinsomros and
Chanin Limwongse and
Nachol Chaiyaratana},
title = {Detecting purely epistatic multi-locus interactions by an omnibus
permutation test on ensembles of two-locus analyses},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {294},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-294},
doi = {10.1186/1471-2105-10-294},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WongsereeAPSLC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WuHHCT09,
author = {Tzong{-}Yuan Wu and
Chi{-}Chun Hsieh and
Jun{-}Jie Hong and
Chung{-}Yung Chen and
Yuh{-}Show Tsai},
title = {{IRSS:} a web-based tool for automatic layout and analysis of {IRES}
secondary structure prediction and searching system \emph{in silico}},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-160},
doi = {10.1186/1471-2105-10-160},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WuHHCT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WuLKN09,
author = {Min Wu and
Xiaoli Li and
Chee Keong Kwoh and
See{-}Kiong Ng},
title = {A core-attachment based method to detect protein complexes in {PPI}
networks},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-169},
doi = {10.1186/1471-2105-10-169},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WuLKN09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WuLT09,
author = {Mingqi Wu and
Faming Liang and
Yanan Tian},
title = {Bayesian modeling of ChIP-chip data using latent variables},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {352},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-352},
doi = {10.1186/1471-2105-10-352},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WuLT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WuQXFYSGY09,
author = {Jun Wu and
Qingchao Qiu and
Lu Xie and
Joseph Fullerton and
Jian Yu and
Yu Shyr and
Alfred L. George Jr. and
Yajun Yi},
title = {Web-based interrogation of gene expression signatures using {EXALT}},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {420},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-420},
doi = {10.1186/1471-2105-10-420},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WuQXFYSGY09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WuXXXYGLBZL09,
author = {Jinyu Wu and
Xiang Xu and
Jian Xiao and
Long Xu and
Huiguang Yi and
Shengjie Gao and
Jing Liu and
Qiyu Bao and
Fangqing Zhao and
Xiaokun Li},
title = {FlyPhy: a phylogenomic analysis platform for \emph{Drosophila }genes
and gene families},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-123},
doi = {10.1186/1471-2105-10-123},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WuXXXYGLBZL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/XiL09,
author = {Yuanxin Xi and
Wei Li},
title = {{BSMAP:} whole genome bisulfite sequence MAPping program},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-232},
doi = {10.1186/1471-2105-10-232},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/XiL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/XiaoLWWLZG09,
author = {Jiamin Xiao and
Yizhou Li and
Kelong Wang and
Zhining Wen and
Menglong Li and
Lifang Zhang and
Xuanmin Guang},
title = {In silico method for systematic analysis of feature importance in
microRNA-mRNA interactions},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {427},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-427},
doi = {10.1186/1471-2105-10-427},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/XiaoLWWLZG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/XieT09,
author = {Chao Xie and
Martti T. Tammi},
title = {CNV-seq, a new method to detect copy number variation using high-throughput
sequencing},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-80},
doi = {10.1186/1471-2105-10-80},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/XieT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/XuGZD09,
author = {Tao Xu and
Jianlei Gu and
Yan Zhou and
LinFang Du},
title = {Improving detection of differentially expressed gene sets by applying
cluster enrichment analysis to Gene Ontology},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-240},
doi = {10.1186/1471-2105-10-240},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/XuGZD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/XuWLZX09,
author = {Yun Xu and
ZhiHao Wang and
YiMing Lei and
YuZhong Zhao and
Yu Xue},
title = {{MBA:} a literature mining system for extracting biomedical abbreviations},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-14},
doi = {10.1186/1471-2105-10-14},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/XuWLZX09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/XuZWWL09,
author = {Tao Xu and
Lujia Zhang and
Xuedong Wang and
Dongzhi Wei and
Tianbi Li},
title = {Structure-based substrate screening for an enzyme},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-257},
doi = {10.1186/1471-2105-10-257},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/XuZWWL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YanSWZ09,
author = {Ren{-}Xiang Yan and
Jing{-}Na Si and
Chuan Wang and
Ziding Zhang},
title = {DescFold: {A} web server for protein fold recognition},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {416},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-416},
doi = {10.1186/1471-2105-10-416},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YanSWZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Yang09,
author = {Zheng Rong Yang},
title = {Predicting sulfotyrosine sites using the random forest algorithm with
significantly improved prediction accuracy},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {361},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-361},
doi = {10.1186/1471-2105-10-361},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Yang09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangA09,
author = {Eric Yang and
Ioannis P. Androulakis},
title = {Assessing and selecting gene expression signals based upon the quality
of the measured dynamics},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-55},
doi = {10.1186/1471-2105-10-55},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YangA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangHY09,
author = {Chao Yang and
Zengyou He and
Weichuan Yu},
title = {Comparison of public peak detection algorithms for {MALDI} mass spectrometry
data analysis},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-4},
doi = {10.1186/1471-2105-10-4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YangHY09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YatesR09,
author = {Phillip D. Yates and
Mark A. Reimers},
title = {{RCMAT:} a regularized covariance matrix approach to testing gene
sets},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {300},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-300},
doi = {10.1186/1471-2105-10-300},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YatesR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YiMCS09,
author = {Ming Yi and
Uma Mudunuri and
Anney Che and
Robert M. Stephens},
title = {Seeking unique and common biological themes in multiple gene lists
or datasets: pathway pattern extraction pipeline for pathway-level
comparative analysis},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-200},
doi = {10.1186/1471-2105-10-200},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YiMCS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YingHC09,
author = {Yiming Ying and
Kaizhu Huang and
Colin Campbell},
title = {Enhanced protein fold recognition through a novel data integration
approach},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {267},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-267},
doi = {10.1186/1471-2105-10-267},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/YingHC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YipKMG09,
author = {Kevin Y. Yip and
Philip M. Kim and
Drew McDermott and
Mark Gerstein},
title = {Multi-level learning: improving the prediction of protein, domain
and residue interactions by allowing information flow between levels},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-241},
doi = {10.1186/1471-2105-10-241},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YipKMG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YoneyaN09,
author = {Takashi Yoneya and
Reina Nishida},
title = {{TCP:} a tool for designing chimera proteins based on the tertiary
structure information},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-9},
doi = {10.1186/1471-2105-10-9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YoneyaN09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YouHGLDA09,
author = {Frank M. You and
Naxin Huo and
Yong Qiang Gu and
Gerard R. Lazo and
Jan Dvorak and
Olin D. Anderson},
title = {ConservedPrimers 2.0: {A} high-throughput pipeline for comparative
genome referenced intron-flanking {PCR} primer design and its application
in wheat {SNP} discovery},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {331},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-331},
doi = {10.1186/1471-2105-10-331},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YouHGLDA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YousefKMSS09,
author = {Malik Yousef and
Mohamed Ketany and
Larry M. Manevitz and
Louise C. Showe and
Michael K. Showe},
title = {Classification and biomarker identification using gene network modules
and support vector machines},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {337},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-337},
doi = {10.1186/1471-2105-10-337},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YousefKMSS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YuGZAS09,
author = {Zhaoxia Yu and
Chad Garner and
Argyrios Ziogas and
Hoda Anton{-}Culver and
Daniel J. Schaid},
title = {Genotype determination for polymorphisms in linkage disequilibrium},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-63},
doi = {10.1186/1471-2105-10-63},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YuGZAS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YuTZLDPHL09,
author = {Yao Yu and
Kang Tu and
Siyuan Zheng and
Yun Li and
Guohui Ding and
Jie Ping and
Pei Hao and
Yixue Li},
title = {{GEOGLE:} context mining tool for the correlation between gene expression
and the phenotypic distinction},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {264},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-264},
doi = {10.1186/1471-2105-10-264},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/YuTZLDPHL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZakiLEC09,
author = {Nazar Zaki and
Sanja Lazarova{-}Molnar and
Wassim El{-}Hajj and
Piers Campbell},
title = {Protein-protein interaction based on pairwise similarity},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-150},
doi = {10.1186/1471-2105-10-150},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ZakiLEC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Zare-MirakabadASNG09,
author = {Fatemeh Zare{-}Mirakabad and
Hayedeh Ahrabian and
Mehdi Sadeghi and
Abbas Nowzari{-}Dalini and
Bahram Goliaei},
title = {New scoring schema for finding motifs in {DNA} Sequences},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-93},
doi = {10.1186/1471-2105-10-93},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/Zare-MirakabadASNG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZarembaRHSFWGPGPSP09,
author = {Sam Zaremba and
Mila Ramos{-}Santacruz and
Thomas Hampton and
Panna Shetty and
Joel Fedorko and
Jon Whitmore and
John M. Greene and
Nicole T. Perna and
Jeremy D. Glasner and
Guy Plunkett III and
Matthew Shaker and
David Pot},
title = {Text-mining of PubMed abstracts by natural language processing to
create a public knowledge base on molecular mechanisms of bacterial
enteropathogens},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-177},
doi = {10.1186/1471-2105-10-177},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ZarembaRHSFWGPGPSP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZengAD09,
author = {Jia Zeng and
Reda Alhajj and
Douglas J. Demetrick},
title = {Representative transcript sets for evaluating a translational initiation
sites predictor},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-206},
doi = {10.1186/1471-2105-10-206},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZengAD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZervakisBTDTK09,
author = {Michalis E. Zervakis and
Michalis E. Blazadonakis and
Georgia Tsiliki and
Vasiliki Danilatou and
Manolis Tsiknakis and
Dimitris Kafetzopoulos},
title = {Outcome prediction based on microarray analysis: a critical perspective
on methods},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-53},
doi = {10.1186/1471-2105-10-53},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZervakisBTDTK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangC09,
author = {Song Zhang and
Jing Cao},
title = {A close examination of double filtering with fold change and t test
in microarray analysis},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {402},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-402},
doi = {10.1186/1471-2105-10-402},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangCLS09,
author = {Song Zhang and
Hu Chen and
Ke Liu and
Zhirong Sun},
title = {Inferring protein function by domain context similarities in protein-protein
interaction networks},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {395},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-395},
doi = {10.1186/1471-2105-10-395},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangCLS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangG09,
author = {Shu{-}Dong Zhang and
Timothy W. Gant},
title = {sscMap: An extensible Java application for connecting small-molecule
drugs using gene-expression signatures},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-236},
doi = {10.1186/1471-2105-10-236},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangWC09,
author = {Heping Zhang and
Minghui Wang and
Xiang Chen},
title = {Willows: a memory efficient tree and forest construction package},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-130},
doi = {10.1186/1471-2105-10-130},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangWC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhaoHWLB09,
author = {Wei Zhao and
Kirk E. Hevener and
Stephen W. White and
Richard E. Lee and
James M. Boyett},
title = {A statistical framework to evaluate virtual screening},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-225},
doi = {10.1186/1471-2105-10-225},
timestamp = {Mon, 27 Mar 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhaoHWLB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZouDF09,
author = {Cunlu Zou and
Katherine J. Denby and
Jianfeng Feng},
title = {Granger causality vs. dynamic Bayesian network inference: a comparative
study},
journal = {{BMC} Bioinform.},
volume = {10},
pages = {401},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-401},
doi = {10.1186/1471-2105-10-401},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZouDF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZouF09,
author = {Cunlu Zou and
Jianfeng Feng},
title = {Granger causality vs. dynamic Bayesian network inference: a comparative
study},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-122},
doi = {10.1186/1471-2105-10-122},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZouF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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