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@article{DBLP:journals/bioinformatics/AburataniGSFISMSTH04,
author = {Sachiyo Aburatani and
Kousuke Goto and
Shigeru Saito and
Masaki Fumoto and
Akira Imaizumi and
Nobuyoshi Sugaya and
Hiroo Murakami and
Makihiko Sato and
Hiroyuki Toh and
Katsuhisa Horimoto},
title = {{ASIAN:} a website for network inference},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2853--2856},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth296},
doi = {10.1093/BIOINFORMATICS/BTH296},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AburataniGSFISMSTH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AccardoGRDICF04,
author = {Maria Carmela Accardo and
Ennio Giordano and
Sara Riccardo and
Filomena Anna Digilio and
Giovanni Iazzetti and
Raffaele A. Calogero and
Maria Furia},
title = {A computational search for box {C/D} snoRNA genes in the \emph{Drosophila
melanogaster} genome},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3293--3301},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth394},
doi = {10.1093/BIOINFORMATICS/BTH394},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AccardoGRDICF04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Adar04,
author = {Eytan Adar},
title = {SaRAD: a Simple and Robust Abbreviation Dictionary},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {527--533},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg439},
doi = {10.1093/BIOINFORMATICS/BTG439},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Adar04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AdryanS04,
author = {Boris Adryan and
Reinhard Schuh},
title = {Gene-Ontology-based clustering of gene expression data},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2851--2852},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth289},
doi = {10.1093/BIOINFORMATICS/BTH289},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AdryanS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AertsLMM04,
author = {Stein Aerts and
Peter Van Loo and
Yves Moreau and
Bart De Moor},
title = {A genetic algorithm for the detection of new cis-regulatory modules
in sets of coregulated genes},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1974--1976},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth179},
doi = {10.1093/BIOINFORMATICS/BTH179},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/AertsLMM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AhmadGS04,
author = {Shandar Ahmad and
M. Michael Gromiha and
Akinori Sarai},
title = {Analysis and prediction of DNA-binding proteins and their binding
residues based on composition, sequence and structural information},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {477--486},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg432},
doi = {10.1093/BIOINFORMATICS/BTG432},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AhmadGS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AkmaevW04,
author = {Viatcheslav R. Akmaev and
Clarence J. Wang},
title = {Correction of sequence-based artifacts in serial analysis of gene
expression},
journal = {Bioinform.},
volume = {20},
number = {8},
pages = {1254--1263},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth077},
doi = {10.1093/BIOINFORMATICS/BTH077},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AkmaevW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Al-ShahrourDD04,
author = {F{\'{a}}tima Al{-}Shahrour and
Ram{\'{o}}n D{\'{\i}}az{-}Uriarte and
Joaqu{\'{\i}}n Dopazo},
title = {FatiGO: a web tool for finding significant associations of Gene Ontology
terms with groups of genes},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {578--580},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg455},
doi = {10.1093/BIOINFORMATICS/BTG455},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Al-ShahrourDD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AlbertA04,
author = {Istv{\'{a}}n Albert and
R{\'{e}}ka Albert},
title = {Conserved network motifs allow protein-protein interaction prediction},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3346--3352},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth402},
doi = {10.1093/BIOINFORMATICS/BTH402},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/AlbertA04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AlexandridisLI04,
author = {Roxana Alexandridis and
Shili Lin and
Mark Irwin},
title = {Class discovery and classification of tumor samples using mixture
modeling of gene expression data - a unified approach},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2545--2552},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth281},
doi = {10.1093/BIOINFORMATICS/BTH281},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AlexandridisLI04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AlmeidaPSCBSAV04,
author = {Luiz G. P. Almeida and
Roger F. C. Paix{\~{a}}o and
Rangel C. Souza and
Gisele C. da Costa and
Frank J. A. Barrientos and
Marcelo Trindade dos Santos and
Darcy F. de Almeida and
Ana Tereza Ribeiro de Vasconcelos},
title = {A System for Automated Bacterial (genome) Integrated Annotation -
{SABIA}},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2832--2833},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth273},
doi = {10.1093/BIOINFORMATICS/BTH273},
timestamp = {Thu, 07 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/AlmeidaPSCBSAV04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AltekarDHR04,
author = {Gautam Altekar and
Sandhya Dwarkadas and
John P. Huelsenbeck and
Fredrik Ronquist},
title = {Parallel Metropolis coupled Markov chain Monte Carlo for Bayesian
phylogenetic inference},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {407--415},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg427},
doi = {10.1093/BIOINFORMATICS/BTG427},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/AltekarDHR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AnderleRLBJ04,
author = {Markus Anderle II and
Sushmita Roy and
Hua Lin and
Christopher Becker and
Keith Joho},
title = {Quantifying reproducibility for differential proteomics: noise analysis
for protein liquid chromatography-mass spectrometry of human serum},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3575--3582},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth446},
doi = {10.1093/BIOINFORMATICS/BTH446},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AnderleRLBJ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AnderssenWDS04,
author = {Robert S. Anderssen and
Y. Wu and
R. Dolferus and
I. Saunders},
title = {An a posteriori strategy for enhancing gene discovery in anonymous
cDNA microarray experiments},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1721--1727},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth152},
doi = {10.1093/BIOINFORMATICS/BTH152},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AnderssenWDS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AndreiniBR04,
author = {Claudia Andreini and
Ivano Bertini and
Antonio Rosato},
title = {A hint to search for metalloproteins in gene banks},
journal = {Bioinform.},
volume = {20},
number = {9},
pages = {1373--1380},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth095},
doi = {10.1093/BIOINFORMATICS/BTH095},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AndreiniBR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AntonovTMBM04,
author = {Alexey V. Antonov and
Igor V. Tetko and
Michael T. Mader and
Jan Budczies and
Hans{-}Werner Mewes},
title = {Optimization models for cancer classification: extracting gene interaction
information from microarray expression data},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {644--652},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg462},
doi = {10.1093/BIOINFORMATICS/BTG462},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/AntonovTMBM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AntonovTPKM04,
author = {Alexey V. Antonov and
Igor V. Tetko and
Volodymyr V. Prokopenko and
Denis Kosykh and
Hans{-}Werner Mewes},
title = {A web portal for classification of expression data using maximal margin
linear programming},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3284--3285},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth376},
doi = {10.1093/BIOINFORMATICS/BTH376},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AntonovTPKM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ArakakiZS04,
author = {Adrian K. Arakaki and
Yang Zhang and
Jeffrey Skolnick},
title = {Large-scale assessment of the utility of low-resolution protein structures
for biochemical function assignment},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1087--1096},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth044},
doi = {10.1093/BIOINFORMATICS/BTH044},
timestamp = {Tue, 04 Jul 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ArakakiZS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ArcadeLFMCCJ04,
author = {Anne Arcade and
Aymeric Labourdette and
Matthieu Falque and
Brigitte Mangin and
Fabien Chardon and
Alain Charcosset and
Johann Joets},
title = {BioMercator: integrating genetic maps and {QTL} towards discovery
of candidate genes},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2324--2326},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth230},
doi = {10.1093/BIOINFORMATICS/BTH230},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ArcadeLFMCCJ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Ardell04,
author = {David H. Ardell},
title = {{SCANMS:} adjusting for multiple comparisons in sliding window neutrality
tests},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1986--1988},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth187},
doi = {10.1093/BIOINFORMATICS/BTH187},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Ardell04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ArndtH04,
author = {Peter F. Arndt and
Terence Hwa},
title = {Regional and time-resolved mutation patterns of the human genome},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1482--1485},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth105},
doi = {10.1093/BIOINFORMATICS/BTH105},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ArndtH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AttoorDCBT04,
author = {Sanju Attoor and
Edward R. Dougherty and
Yidong Chen and
Michael L. Bittner and
Jeffrey M. Trent},
title = {Which is better for cDNA-microarray-based classification: ratios or
direct intensities},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2513--2520},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth272},
doi = {10.1093/BIOINFORMATICS/BTH272},
timestamp = {Tue, 28 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/AttoorDCBT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AungT04,
author = {Zeyar Aung and
Kian{-}Lee Tan},
title = {Rapid 3D protein structure database searching using information retrieval
techniques},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1045--1052},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth036},
doi = {10.1093/BIOINFORMATICS/BTH036},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/AungT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AzadB04,
author = {Rajeev K. Azad and
Mark Borodovsky},
title = {Effects of choice of {DNA} sequence model structure on gene identification
accuracy},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {993--1005},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth028},
doi = {10.1093/BIOINFORMATICS/BTH028},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AzadB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BaeM04,
author = {Kyounghwa Bae and
Bani K. Mallick},
title = {Gene selection using a two-level hierarchical Bayesian model},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3423--3430},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth419},
doi = {10.1093/BIOINFORMATICS/BTH419},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BaeM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BaggerlyMC04,
author = {Keith A. Baggerly and
Jeffrey S. Morris and
Kevin R. Coombes},
title = {Reproducibility of {SELDI-TOF} protein patterns in serum: comparing
datasets from different experiments},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {777--785},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg484},
doi = {10.1093/BIOINFORMATICS/BTG484},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BaggerlyMC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BahloXW04,
author = {Melanie Bahlo and
Lei Xing and
C. R. Wilkinson},
title = {HumanMSD and MouseMSD: generating genetic maps for human and murine
microsatellite markers},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3280--3283},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth375},
doi = {10.1093/BIOINFORMATICS/BTH375},
timestamp = {Tue, 27 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BahloXW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BairdJW04,
author = {David Baird and
Peter Johnstone and
Theresa Wilson},
title = {Normalization of microarray data using a spatial mixed model analysis
which includes splines},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3196--3205},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth384},
doi = {10.1093/BIOINFORMATICS/BTH384},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BairdJW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BakelHW04,
author = {Harm van Bakel and
Martijn A. Huynen and
Cisca Wijmenga},
title = {Prokaryotic diversity of the Saccharomyces cerevisiae Atx1p-mediated
copper pathway},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2644--2655},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth298},
doi = {10.1093/BIOINFORMATICS/BTH298},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BakelHW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BalasubramanianLSG04,
author = {Raji Balasubramanian and
Thomas LaFramboise and
Denise Scholtens and
Robert Gentleman},
title = {A graph-theoretic approach to testing associations between disparate
sources of functional genomics data},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3353--3362},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth405},
doi = {10.1093/BIOINFORMATICS/BTH405},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BalasubramanianLSG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BallmanGOT04,
author = {Karla V. Ballman and
Diane E. Grill and
Ann L. Oberg and
Terry M. Therneau},
title = {Faster cyclic loess: normalizing {RNA} arrays via linear models},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2778--2786},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth327},
doi = {10.1093/BIOINFORMATICS/BTH327},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BallmanGOT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Bar-Joseph04,
author = {Ziv Bar{-}Joseph},
title = {Analyzing time series gene expression data},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2493--2503},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth283},
doi = {10.1093/BIOINFORMATICS/BTH283},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Bar-Joseph04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Barash04,
author = {Danny Barash},
title = {Second eigenvalue of the Laplacian matrix for predicting {RNA} conformational
switch by mutation},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1861--1869},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth157},
doi = {10.1093/BIOINFORMATICS/BTH157},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Barash04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BarashDKFGFK04,
author = {Yoseph Barash and
Elinor Dehan and
Meir Krupsky and
Wilbur Franklin and
Marc Geraci and
Nir Friedman and
Naftali Kaminski},
title = {Comparative analysis of algorithms for signal quantitation from oligonucleotide
microarrays},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {839--846},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg487},
doi = {10.1093/BIOINFORMATICS/BTG487},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/BarashDKFGFK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BarenH04,
author = {Marijke J. van Baren and
Peter Heutink},
title = {The {PCR} Suite},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {591--593},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg473},
doi = {10.1093/BIOINFORMATICS/BTG473},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BarenH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Barker04,
author = {Daniel Barker},
title = {{LVB:} parsimony and simulated annealing in the search for phylogenetic
trees},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {274--275},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg402},
doi = {10.1093/BIOINFORMATICS/BTG402},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Barker04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BarthFSP04,
author = {Sandra Barth and
Markus Fischer and
Rolf D. Schmid and
J{\"{u}}rgen Pleiss},
title = {The database of epoxide hydrolases and haloalkane dehalogenases: one
structure, many functions},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2845--2847},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth284},
doi = {10.1093/BIOINFORMATICS/BTH284},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BarthFSP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BastienARM04,
author = {Olivier Bastien and
Jean{-}Christophe Aude and
Sylvaine Roy and
Eric Mar{\'{e}}chal},
title = {Fundamentals of massive automatic pairwise alignments of protein sequences:
theoretical significance of Z-value statistics},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {534--537},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg440},
doi = {10.1093/BIOINFORMATICS/BTG440},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BastienARM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BatemanV04,
author = {Alex Bateman and
Alfonso Valencia},
title = {New Leadership for Bioinformatics},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1821},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth403},
doi = {10.1093/BIOINFORMATICS/BTH403},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BatemanV04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BaumgartnerBBMWOLR04,
author = {Christian Baumgartner and
Christian B{\"{o}}hm and
Daniela Baumgartner and
G. Marini and
Klaus Weinberger and
B. Olgem{\"{o}}ller and
B. Liebl and
A. A. Roscher},
title = {Supervised machine learning techniques for the classification of metabolic
disorders in newborns},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {2985--2996},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth343},
doi = {10.1093/BIOINFORMATICS/BTH343},
timestamp = {Tue, 30 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BaumgartnerBBMWOLR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Bejerano04,
author = {Gill Bejerano},
title = {Algorithms for variable length Markov chain modeling},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {788--789},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg489},
doi = {10.1093/BIOINFORMATICS/BTG489},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Bejerano04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BelacelCLO04,
author = {Nabil Belacel and
Miroslava Cuperlovic{-}Culf and
Mark Laflamme and
Rodney Ouellette},
title = {Fuzzy J-Means and {VNS} methods for clustering genes from microarray
data},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1690--1701},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth142},
doi = {10.1093/BIOINFORMATICS/BTH142},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/BelacelCLO04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BenitoPDWXPM04,
author = {M{\'{o}}nica Benito and
Joel S. Parker and
Quan Du and
Junyuan Wu and
Dong Xiang and
Charles M. Perou and
James Stephen Marron},
title = {Adjustment of systematic microarray data biases},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {105--114},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg385},
doi = {10.1093/BIOINFORMATICS/BTG385},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BenitoPDWXPM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BerezinGRPPFCB04,
author = {Carine Berezin and
Fabian Glaser and
Josef Rosenberg and
Inbal Paz and
Tal Pupko and
Piero Fariselli and
Rita Casadio and
Nir Ben{-}Tal},
title = {ConSeq: the identification of functionally and structurally important
residues in protein sequences},
journal = {Bioinform.},
volume = {20},
number = {8},
pages = {1322--1324},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth070},
doi = {10.1093/BIOINFORMATICS/BTH070},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BerezinGRPPFCB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BeumingW04,
author = {Thijs Beuming and
Harel Weinstein},
title = {A knowledge-based scale for the analysis and prediction of buried
and exposed faces of transmembrane domain proteins},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1822--1835},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth143},
doi = {10.1093/BIOINFORMATICS/BTH143},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BeumingW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BhasinR04,
author = {Manoj Bhasin and
G. P. S. Raghava},
title = {{SVM} based method for predicting HLA-DRB1\({}^{\mbox{*}}\)0401 binding
peptides in an antigen sequence},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {421--423},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg424},
doi = {10.1093/BIOINFORMATICS/BTG424},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BhasinR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BhattacharjeePNA04,
author = {Madhuchhanda Bhattacharjee and
Colin C. Pritchard and
Peter S. Nelson and
Elja Arjas},
title = {Bayesian integrated functional analysis of microarray data},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {2943--2953},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth338},
doi = {10.1093/BIOINFORMATICS/BTH338},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BhattacharjeePNA04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Bickel04,
author = {David R. Bickel},
title = {Degrees of differential gene expression: detecting biologically significant
expression differences and estimating their magnitudes},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {682--688},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg468},
doi = {10.1093/BIOINFORMATICS/BTG468},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Bickel04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BidautO04,
author = {Ghislain Bidaut and
Michael F. Ochs},
title = {ClutrFree: cluster tree visualization and interpretation},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2869--2871},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth307},
doi = {10.1093/BIOINFORMATICS/BTH307},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BidautO04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BikandiMRG04,
author = {Joseba Bikandi and
Rosario San Mill{\'{a}}n and
Aitor Rementeria and
Javier Garaizar},
title = {In silico analysis of complete bacterial genomes: PCR, {AFLP-PCR}
and endonuclease restriction},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {798--799},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg491},
doi = {10.1093/BIOINFORMATICS/BTG491},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BikandiMRG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Bilbao-CastroSGF04,
author = {Jose{-}Roman Bilbao{-}Castro and
Carlos Oscar S{\'{a}}nchez Sorzano and
Inmaculada Garc{\'{\i}}a and
Jos{\'{e}}{-}Jes{\'{u}}s Fern{\'{a}}ndez},
title = {Phan3D: design of biological phantoms in 3D electron microscopy},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3286--3288},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth377},
doi = {10.1093/BIOINFORMATICS/BTH377},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Bilbao-CastroSGF04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BilgenKOI04,
author = {Mehmet Bilgen and
Mehmet Karaca and
A. Naci Onus and
Ayse G{\"{u}}l Ince},
title = {A software program combining sequence motif searches with keywords
for finding repeats containing {DNA} sequences},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3379--3386},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth410},
doi = {10.1093/BIOINFORMATICS/BTH410},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BilgenKOI04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BlinovFGH04,
author = {Michael L. Blinov and
James R. Faeder and
Byron Goldstein and
William S. Hlavacek},
title = {BioNetGen: software for rule-based modeling of signal transduction
based on the interactions of molecular domains},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3289--3291},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth378},
doi = {10.1093/BIOINFORMATICS/BTH378},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BlinovFGH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BluthgenKCH04,
author = {Nils Bl{\"{u}}thgen and
Szymon M. Kielbasa and
Branka Cajavec and
Hanspeter Herzel},
title = {{HOMGL} - comparing genelists across species and with different accession
numbers},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {125--126},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg379},
doi = {10.1093/BIOINFORMATICS/BTG379},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BluthgenKCH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BoehmGS04,
author = {Andreas M. Boehm and
Florian Grosse{-}Coosmann and
Albert Sickmann},
title = {Command line tool for calculating theoretical {MS} spectra for given
sequences},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2889--2891},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth328},
doi = {10.1093/BIOINFORMATICS/BTH328},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BoehmGS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BonnetWRP04,
author = {Eric Bonnet and
Jan Wuyts and
Pierre Rouz{\'{e}} and
Yves Van de Peer},
title = {Evidence that microRNA precursors, unlike other non-coding RNAs, have
lower folding free energies than random sequences},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {2911--2917},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth374},
doi = {10.1093/BIOINFORMATICS/BTH374},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BonnetWRP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BoutrosO04,
author = {Paul C. Boutros and
Allan B. Okey},
title = {{PUNS:} transcriptomic- and genomic-in silico {PCR} for enhanced primer
design},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2399--2400},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth257},
doi = {10.1093/BIOINFORMATICS/BTH257},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BoutrosO04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Boyle04,
author = {John Boyle},
title = {SeqExpress: desktop analysis and visualization tool for gene expression
experiments},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1649--1650},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth123},
doi = {10.1093/BIOINFORMATICS/BTH123},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Boyle04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BoyleWGJBCS04,
author = {Elizabeth I. Boyle and
Shuai Weng and
Jeremy Gollub and
Heng Jin and
David Botstein and
J. Michael Cherry and
Gavin Sherlock},
title = {{GO:} : TermFinder--open source software for accessing Gene Ontology
information and finding significantly enriched Gene Ontology terms
associated with a list of genes},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3710--3715},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth456},
doi = {10.1093/BIOINFORMATICS/BTH456},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/BoyleWGJBCS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Braga-NetoD04,
author = {Ulisses M. Braga{-}Neto and
Edward R. Dougherty},
title = {Is cross-validation valid for small-sample microarray classification?},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {374--380},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg419},
doi = {10.1093/BIOINFORMATICS/BTG419},
timestamp = {Fri, 24 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/Braga-NetoD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Braga-NetoHDNC04,
author = {Ulisses M. Braga{-}Neto and
Ronaldo Fumio Hashimoto and
Edward R. Dougherty and
Danh V. Nguyen and
Raymond J. Carroll},
title = {Is cross-validation better than resubstitution for ranking genes?},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {253--258},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg399},
doi = {10.1093/BIOINFORMATICS/BTG399},
timestamp = {Fri, 24 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/Braga-NetoHDNC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BrayMRSETO04,
author = {James E. Bray and
Russell L. Marsden and
Stuart C. G. Rison and
Alexei Savchenko and
Aled M. Edwards and
Janet M. Thornton and
Christine A. Orengo},
title = {A practical and robust sequence search strategy for structural genomics
target selection},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2288--2295},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth240},
doi = {10.1093/BIOINFORMATICS/BTH240},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BrayMRSETO04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BrendelXZ04,
author = {Volker Brendel and
Liqun Xing and
Wei Zhu},
title = {Gene structure prediction from consensus spliced alignment of multiple
ESTs matching the same genomic locus},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1157--1169},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth058},
doi = {10.1093/BIOINFORMATICS/BTH058},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BrendelXZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BrodieRU04,
author = {Ryan Brodie and
Rachel L. Roper and
Chris Upton},
title = {JDotter: a Java interface to multiple dotplots generated by dotter},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {279--281},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg406},
doi = {10.1093/BIOINFORMATICS/BTG406},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BrodieRU04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BroetLRDM04,
author = {Philippe Bro{\"{e}}t and
Alex Lewin and
Sylvia Richardson and
Cyril Dalmasso and
Henri Magdelenat},
title = {A mixture model-based strategy for selecting sets of genes in multiclass
response microarray experiments},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2562--2571},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth285},
doi = {10.1093/BIOINFORMATICS/BTH285},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BroetLRDM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BrooksFS04,
author = {Dawn J. Brooks and
Jacques R. Fresco and
Mona Singh},
title = {A novel method for estimating ancestral amino acid composition and
its application to proteins of the Last Universal Ancestor},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2251--2257},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth235},
doi = {10.1093/BIOINFORMATICS/BTH235},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BrooksFS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Bruskiewich04,
author = {Richard M. Bruskiewich},
title = {Guest Editor Preface: Plant {\&} Animal Genome {(PAG)} Meeting
Bioinformatics Session Paper Competition},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {139},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth016},
doi = {10.1093/BIOINFORMATICS/BTH016},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Bruskiewich04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BrylinskiJKR04,
author = {Michal Brylinski and
Wiktor Jurkowski and
Leszek Konieczny and
Irena Roterman},
title = {Limited conformational space for early-stage protein folding simulation},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {199--205},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg391},
doi = {10.1093/BIOINFORMATICS/BTG391},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BrylinskiJKR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BuehlerSSBU04,
author = {Eugen C. Buehler and
Jeffrey R. Sachs and
Kui Shao and
Ansuman Bagchi and
Lyle H. Ungar},
title = {The {CRASSS} plug-in for integrating annotation data with hierarchical
clustering results},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3266--3269},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth362},
doi = {10.1093/BIOINFORMATICS/BTH362},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BuehlerSSBU04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Bundschuh04,
author = {Ralf Bundschuh},
title = {Computational prediction of {RNA} editing sites},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3214--3220},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth387},
doi = {10.1093/BIOINFORMATICS/BTH387},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Bundschuh04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BurgerDB04,
author = {Albert Burger and
Duncan Davidson and
Richard A. Baldock},
title = {Formalization of mouse embryo anatomy},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {259--267},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg400},
doi = {10.1093/BIOINFORMATICS/BTG400},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/BurgerDB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CaiC04,
author = {Yu{-}Dong Cai and
Kuo{-}Chen Chou},
title = {Predicting subcellular localization of proteins in a hybridization
space},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1151--1156},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth054},
doi = {10.1093/BIOINFORMATICS/BTH054},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CaiC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CaiD04,
author = {Yu{-}Dong Cai and
Andrew J. Doig},
title = {Prediction of Saccharomyces cerevisiae protein functional class from
functional domain composition},
journal = {Bioinform.},
volume = {20},
number = {8},
pages = {1292--1300},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth085},
doi = {10.1093/BIOINFORMATICS/BTH085},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CaiD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CarterBGB04,
author = {Scott L. Carter and
Christian M. Brechb{\"{u}}hler and
Michael Griffin and
Andrew T. Bond},
title = {Gene co-expression network topology provides a framework for molecular
characterization of cellular state},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2242--2250},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth234},
doi = {10.1093/BIOINFORMATICS/BTH234},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CarterBGB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CasstevensB04,
author = {Terry M. Casstevens and
Edward S. Buckler},
title = {{GDPC:} connecting researchers with multiple integrated data sources},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2839--2840},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth277},
doi = {10.1093/BIOINFORMATICS/BTH277},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CasstevensB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CatherinotL04,
author = {Vincent Catherinot and
Gilles Labesse},
title = {ViTO: tool for refinement of protein sequence-structure alignments},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3694--3696},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth429},
doi = {10.1093/BIOINFORMATICS/BTH429},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/CatherinotL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CaticCCP04,
author = {Andr{\'{e}} Catic and
Cal T. Collins and
George M. Church and
Hidde L. Ploegh},
title = {Preferred in vivo ubiquitination sites},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3302--3307},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth407},
doi = {10.1093/BIOINFORMATICS/BTH407},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CaticCCP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CavalcantiL04,
author = {Andre R. O. Cavalcanti and
Laura F. Landweber},
title = {Gene Unscrambler for detangling scrambled genes in ciliates},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {800--802},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth003},
doi = {10.1093/BIOINFORMATICS/BTH003},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CavalcantiL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChagoyenKACG04,
author = {Monica Chagoyen and
M. Erdem Kurul and
Pedro A. de Alarc{\'{o}}n and
Jos{\'{e}} Mar{\'{\i}}a Carazo and
Amarnath Gupta},
title = {Designing and executing scientific workflows with a programmable integrator},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {2092--2100},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth209},
doi = {10.1093/BIOINFORMATICS/BTH209},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChagoyenKACG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChaissonPT04,
author = {Mark Chaisson and
Pavel A. Pevzner and
Haixu Tang},
title = {Fragment assembly with short reads},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {2067--2074},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth205},
doi = {10.1093/BIOINFORMATICS/BTH205},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChaissonPT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChalkWS04,
author = {Alistair M. Chalk and
Martin Wennerberg and
Erik L. L. Sonnhammer},
title = {Sfixem - graphical sequence feature display in Java},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2488--2490},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth265},
doi = {10.1093/BIOINFORMATICS/BTH265},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChalkWS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChangSA04,
author = {Jeffrey T. Chang and
Hinrich Sch{\"{u}}tze and
Russ B. Altman},
title = {{GAPSCORE:} finding gene and protein names one word at a time},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {216--225},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg393},
doi = {10.1093/BIOINFORMATICS/BTG393},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChangSA04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChapmanBSP04,
author = {Brad A. Chapman and
John E. Bowers and
Stefan R. Schulze and
Andrew H. Paterson},
title = {A comparative phylogenetic approach for dating whole genome duplication
events},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {180--185},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth022},
doi = {10.1093/BIOINFORMATICS/BTH022},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChapmanBSP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChenDTHSTDF04,
author = {James J. Chen and
Robert R. Delongchamp and
Chen{-}An Tsai and
Huey{-}miin Hsueh and
Frank Sistare and
Karol L. Thompson and
Varsha G. Desai and
James C. Fuscoe},
title = {Analysis of variance components in gene expression data},
journal = {Bioinform.},
volume = {20},
number = {9},
pages = {1436--1446},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth118},
doi = {10.1093/BIOINFORMATICS/BTH118},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChenDTHSTDF04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChenEF04,
author = {Duhong Chen and
Oliver Eulenstein and
David Fern{\'{a}}ndez{-}Baca},
title = {Rainbow: a toolbox for phylogenetic supertree construction and analysis},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2872--2873},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth313},
doi = {10.1093/BIOINFORMATICS/BTH313},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChenEF04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChenLLLC04,
author = {Hong{-}Chu Chen and
Hsiao{-}Ching Lee and
Tsai{-}Yun Lin and
Wen{-}Hsiung Li and
Bor{-}Sen Chen},
title = {Quantitative characterization of the transcriptional regulatory network
in the yeast cell cycle},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1914--1927},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth178},
doi = {10.1093/BIOINFORMATICS/BTH178},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChenLLLC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChenLS04,
author = {Dung{-}Tsa Chen and
Sue{-}Hwa Lin and
Seng{-}jaw Soong},
title = {Gene selection for oligonucleotide array: an approach using {PM} probe
level data},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {854--862},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg493},
doi = {10.1093/BIOINFORMATICS/BTG493},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChenLS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChenOBW04,
author = {Li Chen and
Rose Oughtred and
Helen M. Berman and
John D. Westbrook},
title = {TargetDB: a target registration database for structural genomics projects},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2860--2862},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth300},
doi = {10.1093/BIOINFORMATICS/BTH300},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChenOBW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChenOJ04,
author = {Chien{-}Yu Chen and
Yen{-}Jen Oyang and
Hsueh{-}Fen Juan},
title = {Incremental generation of summarized clustering hierarchy for protein
family analysis},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2586--2596},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth290},
doi = {10.1093/BIOINFORMATICS/BTH290},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChenOJ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChiangYH04,
author = {Jung{-}Hsien Chiang and
Hsu{-}Chun Yu and
Huai{-}Jen Hsu},
title = {{GIS:} a biomedical text-mining system for gene information discovery},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {120--121},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg369},
doi = {10.1093/BIOINFORMATICS/BTG369},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChiangYH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChikayamaKKY04,
author = {Eisuke Chikayama and
Atsushi Kurotani and
Yutaka Kuroda and
Shigeyuki Yokoyama},
title = {ProteoMix: an integrated and flexible system for interactively analyzing
large numbers of protein sequences},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2836--2838},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth276},
doi = {10.1093/BIOINFORMATICS/BTH276},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChikayamaKKY04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChoL04,
author = {HyungJun Cho and
Jae K. Lee},
title = {Bayesian hierarchical error model for analysis of gene expression
data},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {2016--2025},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth192},
doi = {10.1093/BIOINFORMATICS/BTH192},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChoL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChoiZZ04,
author = {Kwok Pui Choi and
Fanfan Zeng and
Louxin Zhang},
title = {Good spaced seeds for homology search},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1053--1059},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth037},
doi = {10.1093/BIOINFORMATICS/BTH037},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChoiZZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChouHMS04,
author = {Hui{-}Hsien Chou and
An{-}Ping Hsia and
Denise L. Mooney and
Patrick S. Schnable},
title = {Picky: oligo microarray design for large genomes},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {2893--2902},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth347},
doi = {10.1093/BIOINFORMATICS/BTH347},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChouHMS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChoudhuriSKG04,
author = {Jomuna V. Choudhuri and
Chris Schleiermacher and
Stefan Kurtz and
Robert Giegerich},
title = {GenAlyzer: interactive visualization of sequence similarities between
entire genomes},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1964--1965},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth161},
doi = {10.1093/BIOINFORMATICS/BTH161},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChoudhuriSKG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChuWW04,
author = {Tzu{-}Ming Chu and
B. S. Weir and
Russell D. Wolfinger},
title = {Comparison of Li-Wong and loglinear mixed models for the statistical
analysis of oligonucleotide arrays},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {500--506},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg435},
doi = {10.1093/BIOINFORMATICS/BTG435},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChuWW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChuangCC04,
author = {Trees{-}Juen Chuang and
Feng{-}Chi Chen and
Meng{-}Yuan Chou},
title = {A comparative method for identification of gene structures and alternatively
spliced variants},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3064--3079},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth368},
doi = {10.1093/BIOINFORMATICS/BTH368},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ChuangCC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CiriaAMM04,
author = {Ricardo Ciria and
Cei Abreu{-}Goodger and
Enrique Morett and
Enrique Merino},
title = {GeConT: gene context analysis},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2307--2308},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth216},
doi = {10.1093/BIOINFORMATICS/BTH216},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CiriaAMM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ClampCSB04,
author = {Michele E. Clamp and
James A. Cuff and
Stephen M. J. Searle and
Geoffrey J. Barton},
title = {The Jalview Java alignment editor},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {426--427},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg430},
doi = {10.1093/BIOINFORMATICS/BTG430},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ClampCSB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CliffordENB04,
author = {Robert J. Clifford and
Michael N. Edmonson and
Cu Nguyen and
Kenneth H. Buetow},
title = {Large-scale analysis of non-synonymous coding region single nucleotide
polymorphisms},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1006--1014},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth029},
doi = {10.1093/BIOINFORMATICS/BTH029},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/CliffordENB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ComeauGVC04,
author = {Stephen R. Comeau and
David W. Gatchell and
Sandor Vajda and
Carlos J. Camacho},
title = {ClusPro: an automated docking and discrimination method for the prediction
of protein complexes},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {45--50},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg371},
doi = {10.1093/BIOINFORMATICS/BTG371},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ComeauGVC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CopeIJWS04,
author = {Leslie Cope and
Rafael A. Irizarry and
Harris A. Jaffee and
Zhijin Wu and
Terence P. Speed},
title = {A benchmark for Affymetrix GeneChip expression measures},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {323--331},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg410},
doi = {10.1093/BIOINFORMATICS/BTG410},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CopeIJWS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CoranderWMS04,
author = {Jukka Corander and
Patrik Waldmann and
Pekka Marttinen and
Mikko J. Sillanp{\"{a}}{\"{a}}},
title = {{BAPS} 2: enhanced possibilities for the analysis of genetic population
structure},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2363--2369},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth250},
doi = {10.1093/BIOINFORMATICS/BTH250},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/CoranderWMS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CorneyBLJ04,
author = {David P. A. Corney and
Bernard F. Buxton and
William B. Langdon and
David T. Jones},
title = {BioRAT: extracting biological information from full-length papers},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3206--3213},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth386},
doi = {10.1093/BIOINFORMATICS/BTH386},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CorneyBLJ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CostaBMSM04,
author = {Luciano da Fontoura Costa and
M. S. Barbosa and
Edson Tadeu Monteiro Manoel and
Johannes Streicher and
Gerd B. M{\"{u}}ller},
title = {Mathematical characterization of three-dimensional gene expression
patterns},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1653--1662},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth135},
doi = {10.1093/BIOINFORMATICS/BTH135},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/CostaBMSM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CrassAB04,
author = {Torsten Crass and
Iris Antes and
Rico Basekow and
Peer Bork and
Christian Buning and
Maik Christensen and
Holger Claussen and
Christian Ebeling and
Peter Ernst and
Val{\'{e}}rie Gailus{-}Durner and
Karl{-}Heinz Glatting and
Rolf Gohla and
Frank G{\"{o}}{\ss}ling and
Korbinian Grote and
Karsten R. Heidtke and
Alexander Herrmann and
Sean O'Keeffe and
O. Kie{\ss}lich and
Sven Kolibal and
Jan O. Korbel and
Thomas Lengauer and
Ines Liebich and
Mark van der Linden and
Hannes Luz and
Kathrin Meissner and
Christian von Mering and
Heinz{-}Theodor Mevissen and
Hans{-}Werner Mewes and
Holger Michael and
Martin Mokrejs and
Tobias M{\"{u}}ller and
Heike Pospisil and
Matthias Rarey and
Jens G. Reich and
Ralf Schneider and
Dietmar Schomburg and
Steffen Schulze{-}Kremer and
Knut Schwarzer and
Ingolf Sommer and
Stephan Springstubbe and
S{\'{a}}ndor Suhai and
Gnanasekaran Thoppae and
Martin Vingron and
Jens Warfsmann and
Thomas Werner and
Daniel Wetzler and
Edgar Wingender and
Ralf Zimmer},
title = {The Helmholtz Network for Bioinformatics: an integrative web portal
for bioinformatics resources},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {268--270},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg398},
doi = {10.1093/BIOINFORMATICS/BTG398},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CrassAB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CserzoEES04,
author = {Mikl{\'{o}}s Cserzo and
Frank Eisenhaber and
Birgit Eisenhaber and
Istv{\'{a}}n Simon},
title = {{TM} or not {TM:} transmembrane protein prediction with low false
positive rate using DAS-TMfilter},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {136--137},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg394},
doi = {10.1093/BIOINFORMATICS/BTG394},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/CserzoEES04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CurtisB04,
author = {R. Keira Curtis and
Martin D. Brand},
title = {Analysing microarray data using modular regulation analysis},
journal = {Bioinform.},
volume = {20},
number = {8},
pages = {1272--1284},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth082},
doi = {10.1093/BIOINFORMATICS/BTH082},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CurtisB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DAddabboLFCCVFCZS04,
author = {Pietro D'Addabbo and
Luca Lenzi and
Federica Facchin and
Raffaella Casadei and
Silvia Canaider and
Lorenza Vitale and
Flavia Frabetti and
Paolo Carinci and
Maria Zannotti and
Pierluigi Strippoli},
title = {GeneRecords: a relational database for GenBank flat file parsing and
data manipulation in personal computers},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2883--2885},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth321},
doi = {10.1093/BIOINFORMATICS/BTH321},
timestamp = {Wed, 04 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DAddabboLFCCVFCZS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DafasBGPS04,
author = {Panos Dafas and
Dan M. Bolser and
Jacek Gomoluch and
Jong{-}Chan Park and
Michael Schroeder},
title = {Using convex hulls to extract interaction interfaces from known structures},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1486--1490},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth106},
doi = {10.1093/BIOINFORMATICS/BTH106},
timestamp = {Thu, 04 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/DafasBGPS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DaraseliaYENNM04,
author = {Nikolai Daraselia and
Anton Yuryev and
Sergei Egorov and
Svetlana Novichkova and
Alexander Nikitin and
Ilya Mazo},
title = {Extracting human protein interactions from {MEDLINE} using a full-sentence
parser},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {604--611},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg452},
doi = {10.1093/BIOINFORMATICS/BTG452},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/DaraseliaYENNM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DarlingMBP04,
author = {Aaron E. Darling and
Bob Mau and
Frederick R. Blattner and
Nicole T. Perna},
title = {{GRIL:} genome rearrangement and inversion locator},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {122--124},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg378},
doi = {10.1093/BIOINFORMATICS/BTG378},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/DarlingMBP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DattaCBD04,
author = {Aniruddha Datta and
Ashish Choudhary and
Michael L. Bittner and
Edward R. Dougherty},
title = {External control in Markovian genetic regulatory networks: the imperfect
information case},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {924--930},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth008},
doi = {10.1093/BIOINFORMATICS/BTH008},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DattaCBD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DattaSBXHD04,
author = {Susmita Datta and
Glen A. Satten and
Dale J. Benos and
Jiazeng Xia and
Martin J. Heslin and
Somnath Datta},
title = {An empirical bayes adjustment to increase the sensitivity of detecting
differentially expressed genes in microarray experiments},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {235--242},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg396},
doi = {10.1093/BIOINFORMATICS/BTG396},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DattaSBXHD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DekkerFAY04,
author = {John P. Dekker and
Anthony Fodor and
Richard W. Aldrich and
Gary Yellen},
title = {A perturbation-based method for calculating explicit likelihood of
evolutionary co-variance in multiple sequence alignments},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1565--1572},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth128},
doi = {10.1093/BIOINFORMATICS/BTH128},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DekkerFAY04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DelgrangeR04,
author = {Olivier Delgrange and
Eric Rivals},
title = {{STAR:} an algorithm to Search for Tandem Approximate Repeats},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2812--2820},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth335},
doi = {10.1093/BIOINFORMATICS/BTH335},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DelgrangeR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DemirBDGAGNC04,
author = {Emek Demir and
Ozgun Babur and
Ugur Dogrus{\"{o}}z and
Attila G{\"{u}}rsoy and
A. Ayaz and
G{\"{u}}rcan G{\"{u}}lesir and
Gurkan Nisanci and
Reng{\"{u}}l {\c{C}}etin{-}Atalay},
title = {An ontology for collaborative construction and analysis of cellular
pathways},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {349--356},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg416},
doi = {10.1093/BIOINFORMATICS/BTG416},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DemirBDGAGNC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DengTSC04,
author = {Minghua Deng and
Zhidong Tu and
Fengzhu Sun and
Ting Chen},
title = {Mapping gene ontology to proteins based on protein-protein interaction
data},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {895--902},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg500},
doi = {10.1093/BIOINFORMATICS/BTG500},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DengTSC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Dettling04,
author = {Marcel Dettling},
title = {BagBoosting for tumor classification with gene expression data},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3583--3593},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth447},
doi = {10.1093/BIOINFORMATICS/BTH447},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Dettling04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DharMSYSCZS04,
author = {Pawan Dhar and
Tan Chee Meng and
Sandeep Somani and
Li Ye and
Anand Sairam and
Mandar A. Chitre and
Hao Zhu and
Kishore R. Sakharkar},
title = {Cellware-a multi-algorithmic software for computational systems biology},
journal = {Bioinform.},
volume = {20},
number = {8},
pages = {1319--1321},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth067},
doi = {10.1093/BIOINFORMATICS/BTH067},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DharMSYSCZS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DimaT04,
author = {Ruxandra I. Dima and
D. Thirumalai},
title = {Proteins associated with diseases show enhanced sequence correlation
between charged residues},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2345--2354},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth245},
doi = {10.1093/BIOINFORMATICS/BTH245},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DimaT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DoddKMCC04,
author = {Lori E. Dodd and
Edward L. Korn and
Lisa M. McShane and
G. V. R. Chandramouli and
Eric Y. Chuang},
title = {Correcting log ratios for signal saturation in cDNA microarrays},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2685--2693},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth309},
doi = {10.1093/BIOINFORMATICS/BTH309},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DoddKMCC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DolinskyBKB04,
author = {Todd J. Dolinsky and
P. M. J. Burgers and
Kevin Karplus and
Nathan A. Baker},
title = {SPrCY: comparison of structural predictions in the Saccharomyces cerevisiae
genome},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2312--2314},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth223},
doi = {10.1093/BIOINFORMATICS/BTH223},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DolinskyBKB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DouBPPNB04,
author = {Yimeng Dou and
Pierre{-}Fran{\c{c}}ois Baisn{\'{e}}e and
Gianluca Pollastri and
Yann P{\'{e}}cout and
James Nowick and
Pierre Baldi},
title = {{ICBS:} a database of interactions between protein chains mediated
by ?-sheet formation},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2767--2777},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth326},
doi = {10.1093/BIOINFORMATICS/BTH326},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DouBPPNB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DuanZ04,
author = {Fenghai Duan and
Heping Zhang},
title = {Correcting the loss of cell-cycle synchrony in clustering analysis
of microarray data using weights},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1766--1771},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth169},
doi = {10.1093/BIOINFORMATICS/BTH169},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DuanZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DudbridgeCW04,
author = {Frank Dudbridge and
Tim Carver and
Gary W. Williams},
title = {Pelican: pedigree editor for linkage computer analysis},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2327--2328},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth231},
doi = {10.1093/BIOINFORMATICS/BTH231},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DudbridgeCW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DugasMBD04,
author = {Martin Dugas and
Sylvia Merk and
S. Breit and
P. Dirschedl},
title = {mdclust-exploratory microarray analysis by multidimensional clustering},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {931--936},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth009},
doi = {10.1093/BIOINFORMATICS/BTH009},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DugasMBD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DurbinR04,
author = {Blythe Durbin and
David M. Rocke},
title = {Variance-stabilizing transformations for two-color microarrays},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {660--667},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg464},
doi = {10.1093/BIOINFORMATICS/BTG464},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/DurbinR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DurinckACMM04,
author = {Steffen Durinck and
Joke Allemeersch and
Vincent Carey and
Yves Moreau and
Bart De Moor},
title = {Importing {MAGE-ML} format microarray data into BioConductor},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3641--3642},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth396},
doi = {10.1093/BIOINFORMATICS/BTH396},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/DurinckACMM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/EbedesD04,
author = {Justin Ebedes and
Amitava Datta},
title = {Multiple sequence alignment in parallel on a workstation cluster},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1193--1195},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth055},
doi = {10.1093/BIOINFORMATICS/BTH055},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/EbedesD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/EdgarS04,
author = {Robert C. Edgar and
Kimmen Sj{\"{o}}lander},
title = {A comparison of scoring functions for protein sequence profile alignment},
journal = {Bioinform.},
volume = {20},
number = {8},
pages = {1301--1308},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth090},
doi = {10.1093/BIOINFORMATICS/BTH090},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/EdgarS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/EdgarS04a,
author = {Robert C. Edgar and
Kimmen Sj{\"{o}}lander},
title = {{COACH:} profile-profile alignment of protein families using hidden
Markov models},
journal = {Bioinform.},
volume = {20},
number = {8},
pages = {1309--1318},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth091},
doi = {10.1093/BIOINFORMATICS/BTH091},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/EdgarS04a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/EilersG04,
author = {Paul H. C. Eilers and
Jelle J. Goeman},
title = {Enhancing scatterplots with smoothed densities},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {623--628},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg454},
doi = {10.1093/BIOINFORMATICS/BTG454},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/EilersG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/EkdahlS04,
author = {Sven Ekdahl and
Erik L. L. Sonnhammer},
title = {ChromoWheel: a new spin on eukaryotic chromosome visualization},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {576--577},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg448},
doi = {10.1093/BIOINFORMATICS/BTG448},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/EkdahlS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/EkstromBKR04,
author = {Claus Thorn Ekstr{\o}m and
S{\o}ren Bak and
Charlotte Kristensen and
Mats Rudemo},
title = {Spot shape modelling and data transformations for microarrays},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2270--2278},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth237},
doi = {10.1093/BIOINFORMATICS/BTH237},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/EkstromBKR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/El-MabroukL04,
author = {Nadia El{-}Mabrouk and
Damian Labuda},
title = {Haplotypes histories as pathways of recombinations},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1836--1841},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth148},
doi = {10.1093/BIOINFORMATICS/BTH148},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/El-MabroukL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/EmrichAFWNGAS04,
author = {Scott J. Emrich and
Srinivas Aluru and
Yan Fu and
Tsui{-}Jung Wen and
Mahesh Narayanan and
Ling Guo and
Daniel A. Ashlock and
Patrick S. Schnable},
title = {A strategy for assembling the maize (Zea mays {L.)} genome},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {140--147},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth017},
doi = {10.1093/BIOINFORMATICS/BTH017},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/EmrichAFWNGAS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Endo04,
author = {Takaho A. Endo},
title = {Probabilistic nucleotide assembling method for sequencing by hybridization},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2181--2188},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth202},
doi = {10.1093/BIOINFORMATICS/BTH202},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Endo04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FamiliLL04,
author = {A. Fazel Famili and
Ganming Liu and
Ziying Liu},
title = {Evaluation and optimization of clustering in gene expression data
analysis},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1535--1545},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth124},
doi = {10.1093/BIOINFORMATICS/BTH124},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FamiliLL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Fares04,
author = {Mario A. Fares},
title = {{SWAPSC:} sliding window analysis procedure to detect selective constraints},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2867--2868},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth303},
doi = {10.1093/BIOINFORMATICS/BTH303},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Fares04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FengCMAOBW04,
author = {Zukang Feng and
Li Chen and
Himabindu Maddula and
Ozgur Akcan and
Rose Oughtred and
Helen M. Berman and
John D. Westbrook},
title = {Ligand Depot: a data warehouse for ligands bound to macromolecules},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {2153--2155},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth214},
doi = {10.1093/BIOINFORMATICS/BTH214},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/FengCMAOBW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FengWZ04,
author = {Wangsen Feng and
Lusheng Wang and
Daming Zhu},
title = {{CTRD:} a fast applet for computing signed translocation distance
between genomes},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3256--3257},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth356},
doi = {10.1093/BIOINFORMATICS/BTH356},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FengWZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FernandezV04,
author = {Jos{\'{e}} Mar{\'{\i}}a Fern{\'{a}}ndez and
Alfonso Valencia},
title = {YAdumper: extracting and translating large information volumes from
relational databases to structured flat files},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2455--2457},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth243},
doi = {10.1093/BIOINFORMATICS/BTH243},
timestamp = {Fri, 07 Jul 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/FernandezV04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FinocchiaroPMAM04,
author = {Giacomo Finocchiaro and
Paola Parise and
Simone P. Minardi and
Myriam Alcalay and
Heiko M{\"{u}}ller},
title = {GenePicker: replicate analysis of Affymetrix gene expression microarrays},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3670--3672},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth416},
doi = {10.1093/BIOINFORMATICS/BTH416},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FinocchiaroPMAM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FischerPR04,
author = {Daniel Fischer and
Jakub Pas and
Leszek Rychlewski},
title = {The PDB-Preview database: a repository of in-silico models of 'on-hold'
{PDB} entries},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2482--2484},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth262},
doi = {10.1093/BIOINFORMATICS/BTH262},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FischerPR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FlibotteCFKSSM04,
author = {Stephane Flibotte and
Readman Chiu and
Chris Fjell and
Martin Krzywinski and
Jacqueline E. Schein and
Heesun Shin and
Marco A. Marra},
title = {Automated ordering of fingerprinted clones},
journal = {Bioinform.},
volume = {20},
number = {8},
pages = {1264--1271},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth079},
doi = {10.1093/BIOINFORMATICS/BTH079},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FlibotteCFKSSM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FloterNSS04,
author = {Andr{\'{e}} Fl{\"{o}}ter and
Jacques Nicolas and
Torsten Schaub and
Joachim Selbig},
title = {Threshold extraction in metabolite concentration data},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1491--1494},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth107},
doi = {10.1093/BIOINFORMATICS/BTH107},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FloterNSS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FofanovLKWBPBFLCP04,
author = {Yuriy Fofanov and
Yi Luo and
Charles Katili and
Jim Wang and
Yuri Belosludtsev and
Thomas Powdrill and
Chetan Belapurkar and
Viacheslav Fofanov and
Tong{-}Bin Li and
Sergei Chumakov and
B. Montgomery Pettitt},
title = {How independent are the appearances of n-mers in different genomes?},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2421--2428},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth266},
doi = {10.1093/BIOINFORMATICS/BTH266},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FofanovLKWBPBFLCP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ForslundHM04,
author = {Kristoffer Forslund and
Daniel H. Huson and
Vincent Moulton},
title = {VisRD--visual recombination detection},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3654--3655},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth400},
doi = {10.1093/BIOINFORMATICS/BTH400},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ForslundHM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FrangeulGRBDDK04,
author = {L. Frangeul and
Philippe Glaser and
Christophe Rusniok and
Carmen Buchrieser and
Eric Duchaud and
P. Dehoux and
Frank Kunst},
title = {CAAT-Box, contigs-Assembly and Annotation Tool-Box for genome sequencing
projects},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {790--797},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg490},
doi = {10.1093/BIOINFORMATICS/BTG490},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FrangeulGRBDDK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FrankHTHW04,
author = {Eibe Frank and
Mark A. Hall and
Leonard E. Trigg and
Geoffrey Holmes and
Ian H. Witten},
title = {Data mining in bioinformatics using Weka},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2479--2481},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth261},
doi = {10.1093/BIOINFORMATICS/BTH261},
timestamp = {Thu, 19 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FrankHTHW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FrickeyL04,
author = {Tancred Frickey and
Andrei N. Lupas},
title = {{CLANS:} a Java application for visualizing protein families based
on pairwise similarity},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3702--3704},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth444},
doi = {10.1093/BIOINFORMATICS/BTH444},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FrickeyL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FriedmanERH04,
author = {Robert Friedman and
Vikram Ekollu and
John R. Rose and
Austin L. Hughes},
title = {Dblox: a genome-wide test for ancient segmental duplication},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2834--2835},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth275},
doi = {10.1093/BIOINFORMATICS/BTH275},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/FriedmanERH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FrommletFB04,
author = {Florian Frommlet and
Andreas Futschik and
Malgorzata Bogdan},
title = {On the significance of sequence alignments when using multiple scoring
matrices},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {881--887},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg498},
doi = {10.1093/BIOINFORMATICS/BTG498},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FrommletFB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FuYSLZLG04,
author = {Yan Fu and
Qiang Yang and
Ruixiang Sun and
Dequan Li and
Rong Zeng and
Charles X. Ling and
Wen Gao},
title = {Exploiting the kernel trick to correlate fragment ions for peptide
identification via tandem mass spectrometry},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1948--1954},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth186},
doi = {10.1093/BIOINFORMATICS/BTH186},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FuYSLZLG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FuenteBHM04,
author = {Alberto de la Fuente and
Nan Bing and
Ina Hoeschele and
Pedro Mendes},
title = {Discovery of meaningful associations in genomic data using partial
correlation coefficients},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3565--3574},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth445},
doi = {10.1093/BIOINFORMATICS/BTH445},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FuenteBHM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FujisawaEUMMMM04,
author = {Hironori Fujisawa and
Shinto Eguchi and
Masaru Ushijima and
Satoshi Miyata and
Yoshio Miki and
T. Muto and
Masaaki Matsuura},
title = {Genotyping of single nucleotide polymorphism using model-based clustering},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {718--726},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg475},
doi = {10.1093/BIOINFORMATICS/BTG475},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/FujisawaEUMMMM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GanFZSTLKS04,
author = {Hin Hark Gan and
Daniela Fera and
Julie Zorn and
Nahum Shiffeldrim and
Michael Tang and
Uri Laserson and
Namhee Kim and
Tamar Schlick},
title = {{RAG:} RNA-As-Graphs database-concepts, analysis, features},
journal = {Bioinform.},
volume = {20},
number = {8},
pages = {1285--1291},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth084},
doi = {10.1093/BIOINFORMATICS/BTH084},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GanFZSTLKS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GaoZ04,
author = {Feng Gao and
Chun{-}Ting Zhang},
title = {Comparison of various algorithms for recognizing short coding sequences
of human genes},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {673--681},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg467},
doi = {10.1093/BIOINFORMATICS/BTG467},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GaoZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GarwoodTRBOP04,
author = {Kevin L. Garwood and
Chris F. Taylor and
Kai J. Runte and
Andy Brass and
Stephen G. Oliver and
Norman W. Paton},
title = {Pedro: a configurable data entry tool for {XML}},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2463--2465},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth251},
doi = {10.1093/BIOINFORMATICS/BTH251},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GarwoodTRBOP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GaspariOP04,
author = {Zolt{\'{a}}n G{\'{a}}sp{\'{a}}ri and
Csaba P. Ortutay and
Andr{\'{a}}s Perczel},
title = {A simple fold with variations: the pacifastin inhibitor family},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {448--451},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg451},
doi = {10.1093/BIOINFORMATICS/BTG451},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GaspariOP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GautierCBI04,
author = {Laurent Gautier and
Leslie Cope and
Benjamin M. Bolstad and
Rafael A. Irizarry},
title = {affy - analysis of Affymetrix GeneChip data at the probe level},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {307--315},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg405},
doi = {10.1093/BIOINFORMATICS/BTG405},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/GautierCBI04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GetzSD04,
author = {Gad Getz and
Alina Starovolsky and
Eytan Domany},
title = {{F2CS:} {FSSP} to {CATH} and {SCOP} prediction server},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {2150--2152},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth208},
doi = {10.1093/BIOINFORMATICS/BTH208},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GetzSD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Ghosh04,
author = {Debashis Ghosh},
title = {Mixture models for assessing differential expression in complex tissues
using microarray data},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1663--1669},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth139},
doi = {10.1093/BIOINFORMATICS/BTH139},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Ghosh04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GilbertUBTMKCWMILKN04,
author = {Don Gilbert and
Yoshihiro Ugawa and
Markus Buchhorn and
Tin Wee Tan and
Akira Mizushima and
Hyunchul Kim and
Kilnam Chon and
Seyeon Weon and
Juncai Ma and
Yoshihiro Ichiyanagi and
Der{-}Ming Liou and
Somnuk Keretho and
Suhaimi Napis},
title = {Bio-Mirror project for public bio-data distribution},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3238--3240},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth219},
doi = {10.1093/BIOINFORMATICS/BTH219},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GilbertUBTMKCWMILKN04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GilchristSW04,
author = {Michael A. Gilchrist and
Laura A. Salter and
Andreas Wagner},
title = {A statistical framework for combining and interpreting proteomic datasets},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {689--700},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg469},
doi = {10.1093/BIOINFORMATICS/BTG469},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/GilchristSW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Giovine04,
author = {Paolo Di Giovine},
title = {{PLPMDB:} Pyridoxal-5'-phosphate dependent enzymes mutants database},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3652--3653},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth399},
doi = {10.1093/BIOINFORMATICS/BTH399},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Giovine04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GirolamiB04,
author = {Mark A. Girolami and
Rainer Breitling},
title = {Biologically valid linear factor models of gene expression},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3021--3033},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth354},
doi = {10.1093/BIOINFORMATICS/BTH354},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GirolamiB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GiselPGLLSP04,
author = {Andreas Gisel and
Maria Panetta and
Giorgio Grillo and
Flavio Licciulli and
Sabino Liuni and
Cecilia Saccone and
Graziano Pesole},
title = {DNAfan: a software tool for automated extraction and analysis of user-defined
sequence regions},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3676--3679},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth420},
doi = {10.1093/BIOINFORMATICS/BTH420},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GiselPGLLSP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GoemanGKH04,
author = {Jelle J. Goeman and
Sara A. van de Geer and
Floor de Kort and
Hans C. van Houwelingen},
title = {A global test for groups of genes: testing association with a clinical
outcome},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {93--99},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg382},
doi = {10.1093/BIOINFORMATICS/BTG382},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GoemanGKH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GoldbergTB04,
author = {Robert N. Goldberg and
Yadu B. Tewari and
Talapady N. Bhat},
title = {Thermodynamics of enzyme-catalyzed reactions - a database for quantitative
biochemistry},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2874--2877},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth314},
doi = {10.1093/BIOINFORMATICS/BTH314},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GoldbergTB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GolfierDDGRP04,
author = {G. Golfier and
M. Tran Dang and
L. Dauphinot and
E. Graison and
J. Rossier and
Marie{-}Claude Potier},
title = {{VARAN:} a web server for Variability Analysis of {DNA} microarray
experiments},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1641--1643},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth117},
doi = {10.1093/BIOINFORMATICS/BTH117},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GolfierDDGRP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GradRHC04,
author = {Yonatan H. Grad and
Frederick P. Roth and
Marc S. Halfon and
George M. Church},
title = {Prediction of similarly acting cis-regulatory modules by subsequence
profiling and comparative genomics in Drosophila melanogaster and
D.pseudoobscura},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2738--2750},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth320},
doi = {10.1093/BIOINFORMATICS/BTH320},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GradRHC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GrantSZMBO04,
author = {Jeffrey D. Grant and
Luke A. Somers and
Yue Zhang and
Frank J. Manion and
Ghislain Bidaut and
Michael F. Ochs},
title = {{FGDP:} functional genomics data pipeline for automated, multiple
microarray data analyses},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {282--283},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg407},
doi = {10.1093/BIOINFORMATICS/BTG407},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GrantSZMBO04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GrassoL04,
author = {Catherine S. Grasso and
Christopher J. Lee},
title = {Combining partial order alignment and progressive multiple sequence
alignment increases alignment speed and scalability to very large
alignment problems},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1546--1556},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth126},
doi = {10.1093/BIOINFORMATICS/BTH126},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GrassoL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GroverMBKB04,
author = {Deepak Grover and
Mitali Mukerji and
Pankaj Bhatnagar and
Krishnamoorthy Kannan and
Samir K. Brahmachari},
title = {Alu repeat analysis in the complete human genome: trends and variations
with respect to genomic composition},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {813--817},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth005},
doi = {10.1093/BIOINFORMATICS/BTH005},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/GroverMBKB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GrubbCB04,
author = {Stephen C. Grubb and
Gary A. Churchill and
Molly A. Bogue},
title = {A collaborative database of inbred mouse strain characteristics},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2857--2859},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth299},
doi = {10.1093/BIOINFORMATICS/BTH299},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GrubbCB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GudaFS04,
author = {Chittibabu Guda and
Eoin Fahy and
Shankar Subramaniam},
title = {{MITOPRED:} a genome-scale method for prediction of nucleus-encoded
mitochondrial proteins},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1785--1794},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth171},
doi = {10.1093/BIOINFORMATICS/BTH171},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GudaFS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GuptaZKVH04,
author = {Shobhit Gupta and
Dorothea Zink and
Bernhard Korn and
Martin Vingron and
Stefan A. Haas},
title = {Genome wide identification and classification of alternative splicing
based on {EST} data},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2579--2585},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth288},
doi = {10.1093/BIOINFORMATICS/BTH288},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GuptaZKVH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HaasDWS04,
author = {Brian J. Haas and
Arthur L. Delcher and
Jennifer R. Wortman and
Steven Salzberg},
title = {DAGchainer: a tool for mining segmental genome duplications and synteny},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3643--3646},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth397},
doi = {10.1093/BIOINFORMATICS/BTH397},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HaasDWS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HallS04,
author = {Ross Hall and
Linda Stern},
title = {A rapid method for illustrating features in both coding and non-coding
regions of a genome},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {982--983},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth042},
doi = {10.1093/BIOINFORMATICS/BTH042},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HallS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HallinU04,
author = {Peter F. Hallin and
David Ussery},
title = {{CBS} Genome Atlas Database: a dynamic storage for bioinformatic results
and sequence data},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3682--3686},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth423},
doi = {10.1093/BIOINFORMATICS/BTH423},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HallinU04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HalperinE04,
author = {Eran Halperin and
Eleazar Eskin},
title = {Haplotype reconstruction from genotype data using Imperfect Phylogeny},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1842--1849},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth149},
doi = {10.1093/BIOINFORMATICS/BTH149},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HalperinE04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HanK04,
author = {Xing Han and
Wenjun Kang},
title = {Sequence analysis and membrane partitioning energies of -helical antimicrobial
peptides},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {970--973},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth027},
doi = {10.1093/BIOINFORMATICS/BTH027},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HanK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HanPKHP04,
author = {Kyungsook Han and
Byungkyu Park and
Hyongguen Kim and
Jinsun Hong and
Jong{-}Chan Park},
title = {{HPID:} The Human Protein Interaction Database},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2466--2470},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth253},
doi = {10.1093/BIOINFORMATICS/BTH253},
timestamp = {Thu, 04 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HanPKHP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HashimotoKSZBD04,
author = {Ronaldo Fumio Hashimoto and
Seungchan Kim and
Ilya Shmulevich and
Wei Zhang and
Michael L. Bittner and
Edward R. Dougherty},
title = {Growing genetic regulatory networks from seed genes},
journal = {Bioinform.},
volume = {20},
number = {8},
pages = {1241--1247},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth074},
doi = {10.1093/BIOINFORMATICS/BTH074},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HashimotoKSZBD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HavertyHGHW04,
author = {Peter M. Haverty and
Li{-}Li Hsiao and
Steven R. Gullans and
Ulla Hansen and
Zhiping Weng},
title = {Limited agreement among three global gene expression methods highlights
the requirement for non-global validation},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3431--3441},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth421},
doi = {10.1093/BIOINFORMATICS/BTH421},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HavertyHGHW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HavertyW04,
author = {Peter M. Haverty and
Zhiping Weng},
title = {CisML: an XML-based format for sequence motif detection software},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1815--1817},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth162},
doi = {10.1093/BIOINFORMATICS/BTH162},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HavertyW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/He04,
author = {Wenqing He},
title = {A spline function approach for detecting differentially expressed
genes in microarray data analysis},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {2954--2963},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth339},
doi = {10.1093/BIOINFORMATICS/BTH339},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/He04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Helden04,
author = {Jacques van Helden},
title = {Metrics for comparing regulatory sequences on the basis of pattern
counts},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {399--406},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg425},
doi = {10.1093/BIOINFORMATICS/BTG425},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Helden04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Heredia-LangnerCJJ04,
author = {Alejandro Heredia{-}Langner and
William R. Cannon and
Kenneth D. Jarman and
Kristin H. Jarman},
title = {Sequence optimization as an alternative to de novo analysis of tandem
mass spectrometry data},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2296--2304},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth242},
doi = {10.1093/BIOINFORMATICS/BTH242},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Heredia-LangnerCJJ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HigaMTKYMPMHN04,
author = {Roberto H. Higa and
Arnaldo J. Montagner and
Roberto C. Togawa and
Paula R. Kuser and
Michel E. B. Yamagishi and
Adauto L. Mancini and
Georgios Joannis Pappas Jr. and
Ronald T. Miura and
Luiz G. Horita and
Goran Neshich},
title = {ConSSeq: a web-based application for analysis of amino acid conservation
based on {HSSP} database and within context of structure},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1983--1985},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth185},
doi = {10.1093/BIOINFORMATICS/BTH185},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HigaMTKYMPMHN04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HigaOHMIKMYTN04,
author = {Roberto H. Higa and
Adilton G. Oliveira and
Luiz G. Horita and
Ronald T. Miura and
Marcus K. Inoue and
Paula R. Kuser and
Adauto L. Mancini and
Michel E. B. Yamagishi and
Roberto C. Togawa and
Goran Neshich},
title = {Defining 3D residue environment in protein structures using {SCORPION}
and {FORMIGA}},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1989--1991},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth190},
doi = {10.1093/BIOINFORMATICS/BTH190},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HigaOHMIKMYTN04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HillS04,
author = {Aubrey Hill and
Eric Sorscher},
title = {Common structural patterns in human genes},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1632--1635},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth134},
doi = {10.1093/BIOINFORMATICS/BTH134},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HillS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HitteDAOG04,
author = {Christophe Hitte and
Thomas Derrien and
Catherine Andr{\'{e}} and
Elaine A. Ostrander and
Francis Galibert},
title = {CRH{\_}Server: an online comparative and radiation hybrid mapping
server for the canine genome},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3665--3667},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth411},
doi = {10.1093/BIOINFORMATICS/BTH411},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HitteDAOG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HofackerBS04,
author = {Ivo L. Hofacker and
Stephan H. Bernhart and
Peter F. Stadler},
title = {Alignment of {RNA} base pairing probability matrices},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2222--2227},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth229},
doi = {10.1093/BIOINFORMATICS/BTH229},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HofackerBS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HofackerPS04,
author = {Ivo L. Hofacker and
Barbara Priwitzer and
Peter F. Stadler},
title = {Prediction of locally stable {RNA} secondary structures for genome-wide
surveys},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {186--190},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg388},
doi = {10.1093/BIOINFORMATICS/BTG388},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HofackerPS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HofackerSS04,
author = {Ivo L. Hofacker and
Peter F. Stadler and
Roman R. Stocsits},
title = {Conserved {RNA} secondary structures in viral genomes: a survey},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1495--1499},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth108},
doi = {10.1093/BIOINFORMATICS/BTH108},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HofackerSS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HornLC04,
author = {Florence Horn and
Anthony L. Lau and
Fred E. Cohen},
title = {Automated extraction of mutation data from the literature: application
of MuteXt to {G} protein-coupled receptors and nuclear hormone receptors},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {557--568},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg449},
doi = {10.1093/BIOINFORMATICS/BTG449},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HornLC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HorneHSD04,
author = {Andrew B. Horne and
T. Charles Hodgman and
Hugh D. Spence and
Andrew R. Dalby},
title = {Constructing an enzyme-centric view of metabolism},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {2050--2055},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth199},
doi = {10.1093/BIOINFORMATICS/BTH199},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HorneHSD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HornshojSPB04,
author = {Henrik Hornsh{\o}j and
Henrik Stengaard and
Frank Panitz and
Christian Bendixen},
title = {SEPON, a Selection and Evaluation Pipeline for OligoNucleotides based
on ESTs with a non-target \emph{T}\({}_{\mbox{m}}\) algorithm for
reducing cross-hybridization in microarray gene expression experiments},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {428--429},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg434},
doi = {10.1093/BIOINFORMATICS/BTG434},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HornshojSPB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HouKJLKCRIL04,
author = {Bo Kyeng Hou and
Jin Sik Kim and
Ji Hoon Jun and
Dong{-}Yup Lee and
Yong Wook Kim and
Sujin Chae and
Mira Roh and
Yong{-}Ho In and
Sang Yup Lee},
title = {BioSilico: an integrated metabolic database system},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3270--3272},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth363},
doi = {10.1093/BIOINFORMATICS/BTH363},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HouKJLKCRIL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HouraiAA04,
author = {Yuichiro Hourai and
Tatsuya Akutsu and
Yutaka Akiyama},
title = {Optimizing substitution matrices by separating score distributions},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {863--873},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg494},
doi = {10.1093/BIOINFORMATICS/BTG494},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HouraiAA04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HsiaoWOS04,
author = {Albert Hsiao and
D. S. Worrall and
Jerrold M. Olefsky and
Shankar Subramaniam},
title = {Variance-modeled posterior inference of microarray data: detecting
gene-expression changes in 3T3-L1 adipocytes},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3108--3127},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth371},
doi = {10.1093/BIOINFORMATICS/BTH371},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HsiaoWOS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuLL04,
author = {Changyu Hu II and
Xiang Li and
Jie Liang},
title = {Developing optimal non-linear scoring function for protein design},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3080--3098},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth369},
doi = {10.1093/BIOINFORMATICS/BTH369},
timestamp = {Tue, 14 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuLL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuangL04,
author = {Ying Huang and
Yanda Li},
title = {Prediction of protein subcellular locations using fuzzy \emph{k}-NN
method},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {21--28},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg366},
doi = {10.1093/BIOINFORMATICS/BTG366},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuangL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuangPPHMH04,
author = {Xiaohong Huang and
Wei Pan and
Soon J. Park and
Xinqiang Han and
Leslie W. Miller and
Jennifer Hall},
title = {Modeling the relationship between {LVAD} support time and gene expression
changes in the human heart by penalized partial least squares},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {888--894},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg499},
doi = {10.1093/BIOINFORMATICS/BTG499},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuangPPHMH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuangTHLPTKH04,
author = {Tao{-}Wei Huang and
An{-}Chi Tien and
Wen{-}Shien Huang and
Yuan{-}Chii G. Lee and
Chin{-}Lin Peng and
Huei{-}Hun Tseng and
Cheng{-}Yan Kao and
Chi{-}Ying F. Huang},
title = {{POINT:} a database for the prediction of protein-protein interactions
based on the orthologous interactome},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3273--3276},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth366},
doi = {10.1093/BIOINFORMATICS/BTH366},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuangTHLPTKH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuangWLPHK04,
author = {Shir{-}Ly Huang and
Li{-}Cheng Wu and
Han{-}Kuen Liang and
Kuan{-}Ting Pan and
Jorng{-}Tzong Horng and
Ming{-}Tat Ko},
title = {PGTdb: a database providing growth temperatures of prokaryotes},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {276--278},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg403},
doi = {10.1093/BIOINFORMATICS/BTG403},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuangWLPHK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuangYCYC04,
author = {Xiaoqiu Huang and
Liang Ye and
Hui{-}Hsien Chou and
I{-}Hsuan Yang and
Kun{-}Mao Chao},
title = {Efficient combination of multiple word models for improved sequence
comparison},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2529--2533},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth279},
doi = {10.1093/BIOINFORMATICS/BTH279},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuangYCYC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuangZ04,
author = {Yue Huang and
Ling Zhang},
title = {Rapid and sensitive dot-matrix methods for genome analysis},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {460--466},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg429},
doi = {10.1093/BIOINFORMATICS/BTG429},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuangZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuangZHPQL04,
author = {Minlie Huang and
Xiaoyan Zhu and
Hao Yu and
Donald G. Payan and
Kunbin Qu and
Ming Li},
title = {Discovering patterns to extract protein-protein interactions from
full texts},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3604--3612},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth451},
doi = {10.1093/BIOINFORMATICS/BTH451},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuangZHPQL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuberFH04,
author = {Thomas Huber and
Geoffrey J. Faulkner and
Philip Hugenholtz},
title = {Bellerophon: a program to detect chimeric sequences in multiple sequence
alignments},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2317--2319},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth226},
doi = {10.1093/BIOINFORMATICS/BTH226},
timestamp = {Tue, 04 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuberFH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuberG04,
author = {Wolfgang Huber and
Robert Gentleman},
title = {matchprobes: a Bioconductor package for the sequence-matching of microarray
probe elements},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1651--1652},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth133},
doi = {10.1093/BIOINFORMATICS/BTH133},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuberG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HuberK04,
author = {Thomas Huber and
Bostjan Kobe},
title = {Comment on 'Protein isoelectric point as a predictor for increased
crystallization screening efficiency'},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2169--2170},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth452},
doi = {10.1093/BIOINFORMATICS/BTH452},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HuberK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HubertE04,
author = {Mia Hubert and
Sanne Engelen},
title = {Robust {PCA} and classification in biosciences},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1728--1736},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth158},
doi = {10.1093/BIOINFORMATICS/BTH158},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HubertE04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HupeSTRB04,
author = {Philippe Hup{\'{e}} and
Nicolas Stransky and
Jean{-}Paul Thiery and
Fran{\c{c}}ois Radvanyi and
Emmanuel Barillot},
title = {Analysis of array {CGH} data: from signal ratio to gain and loss of
{DNA} regions},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3413--3422},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth418},
doi = {10.1093/BIOINFORMATICS/BTH418},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/HupeSTRB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HusonS04,
author = {Daniel H. Huson and
Mike A. Steel},
title = {Phylogenetic trees based on gene content},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {2044--2049},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth198},
doi = {10.1093/BIOINFORMATICS/BTH198},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HusonS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HvidstenKKF04,
author = {Torgeir R. Hvidsten and
Andriy Kryshtafovych and
Henryk Jan Komorowski and
Krzysztof Fidelis},
title = {A novel approach to fold recognition using sequence-derived properties
from sets of structurally similar local fragments of proteins},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {293},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth062},
doi = {10.1093/BIOINFORMATICS/BTH062},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HvidstenKKF04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/HwangSC04,
author = {Daehee Hwang and
George Stephanopoulos and
Christina Chan},
title = {Inverse modeling using multi-block {PLS} to determine the environmental
conditions that provide optimal cellular function},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {487--499},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg433},
doi = {10.1093/BIOINFORMATICS/BTG433},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/HwangSC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/IhmelsBB04,
author = {Jan Ihmels and
Sven Bergmann and
Naama Barkai},
title = {Defining transcription modules using large-scale gene expression data},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {1993--2003},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth166},
doi = {10.1093/BIOINFORMATICS/BTH166},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/IhmelsBB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/IossifovKFHBWR04,
author = {Ivan Iossifov and
Michael Krauthammer and
Carol Friedman and
Vasileios Hatzivassiloglou and
Joel S. Bader and
Kevin P. White and
Andrey Rzhetsky},
title = {Probabilistic inference of molecular networks from noisy data sources},
journal = {Bioinform.},
volume = {20},
number = {8},
pages = {1205--1213},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth061},
doi = {10.1093/BIOINFORMATICS/BTH061},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/IossifovKFHBWR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/IragneBGD04,
author = {Florian Iragne and
Aur{\'{e}}lien Barr{\'{e}} and
Nicolas Goffard and
Antoine de Daruvar},
title = {AliasServer: a web server to handle multiple aliases used to refer
to proteins},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2331--2332},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth241},
doi = {10.1093/BIOINFORMATICS/BTH241},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/IragneBGD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/IzaguirreCHCCTFAHNG04,
author = {Jes{\'{u}}s A. Izaguirre and
Rajiv Chaturvedi and
Chengbang Huang and
Trevor M. Cickovski and
J. Coffland and
Gilberto L. Thomas and
Gabor Forgacs and
Mark S. Alber and
H. George E. Hentschel and
Stuart A. Newman and
James A. Glazier},
title = {COMPUCELL, a multi-model framework for simulation of morphogenesis},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1129--1137},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth050},
doi = {10.1093/BIOINFORMATICS/BTH050},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/IzaguirreCHCCTFAHNG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JamesVZT04,
author = {Andrew C. James and
Jim G. Veitch and
Ali R. Zareh and
Timothy Triche},
title = {Sensitivity and specificity of five abundance estimators for high-density
oligonucleotide microarrays},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1060--1065},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth038},
doi = {10.1093/BIOINFORMATICS/BTH038},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/JamesVZT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JansenHBGS04,
author = {Jeroen J. Jansen and
Huub C. J. Hoefsloot and
Hans F. M. Boelens and
Jan van der Greef and
Age K. Smilde},
title = {Analysis of longitudinal metabolomics data},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2438--2446},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth268},
doi = {10.1093/BIOINFORMATICS/BTH268},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/JansenHBGS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Jarman04,
author = {Simon N. Jarman},
title = {Amplicon: software for designing {PCR} primers on aligned {DNA} sequences},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1644--1645},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth121},
doi = {10.1093/BIOINFORMATICS/BTH121},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Jarman04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JensenL04,
author = {Shane T. Jensen and
Jun S. Liu},
title = {BioOptimizer: a Bayesian scoring function approach to motif discovery},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1557--1564},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth127},
doi = {10.1093/BIOINFORMATICS/BTH127},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/JensenL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JiT04,
author = {Liping Ji and
Kian{-}Lee Tan},
title = {Mining gene expression data for positive and negative co-regulated
gene clusters},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2711--2718},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth312},
doi = {10.1093/BIOINFORMATICS/BTH312},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/JiT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JiXS04,
author = {Yongmei Ji and
Xing Xu and
Gary D. Stormo},
title = {A graph theoretical approach for predicting common {RNA} secondary
structure motifs including pseudoknots in unaligned sequences},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1603--1611},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth132},
doi = {10.1093/BIOINFORMATICS/BTH132},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/JiXS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JiYLLS04,
author = {Xinglai Ji and
Yuan Yuan and
Jesse Li{-}Ling and
Yanda Li and
Zhirong Sun},
title = {{HMMGEP:} clustering gene expression data using hidden Markov models},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1799--1800},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth145},
doi = {10.1093/BIOINFORMATICS/BTH145},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/JiYLLS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JonesHWPS04,
author = {Andrew R. Jones and
Ela Hunt and
Jonathan M. Wastling and
Angel D. Pizarro and
Christian J. Stoeckert Jr.},
title = {An object model and database for functional genomics},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1583--1590},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth130},
doi = {10.1093/BIOINFORMATICS/BTH130},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/JonesHWPS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JongMMVY04,
author = {Kees Jong and
Elena Marchiori and
Gerrit Meijer and
Aad van der Vaart and
Bauke Ylstra},
title = {Breakpoint identification and smoothing of array comparative genomic
hybridization data},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3636--3637},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth355},
doi = {10.1093/BIOINFORMATICS/BTH355},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/JongMMVY04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/JureticBB04,
author = {Nikoleta Juretic and
Thomas E. Bureau and
Richard M. Bruskiewich},
title = {Transposable element annotation of the rice genome},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {155--160},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth019},
doi = {10.1093/BIOINFORMATICS/BTH019},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/JureticBB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KahveciLS04,
author = {Tamer Kahveci and
Vebjorn Ljosa and
Ambuj K. Singh},
title = {Speeding up whole-genome alignment by indexing frequency vectors},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {2122--2134},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth212},
doi = {10.1093/BIOINFORMATICS/BTH212},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KahveciLS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KaluszkaG04,
author = {Aaron Kaluszka and
Cynthia Gibas},
title = {Interactive gene-order comparison for multiple small genomes},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3662--3664},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth406},
doi = {10.1093/BIOINFORMATICS/BTH406},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KaluszkaG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KantardjieffJR04,
author = {Katherine A. Kantardjieff and
Mortaza Jamshidian and
Bernhard Rupp},
title = {Distributions of pI versus pH provide prior information for the design
of crystallization screening experiments: response to comment on 'Protein
isoelectric point as a predictor for increased crystallization screening
efficiency'},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2171--2174},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth453},
doi = {10.1093/BIOINFORMATICS/BTH453},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KantardjieffJR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KantardjieffR04,
author = {Katherine A. Kantardjieff and
Bernhard Rupp},
title = {Protein isoelectric point as a predictor for increased crystallization
screening efficiency},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2162--2168},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth066},
doi = {10.1093/BIOINFORMATICS/BTH066},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KantardjieffR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KarpinetsFF04,
author = {Tatiana V. Karpinets and
Brent D. Foy and
John M. Frazier},
title = {Tailored gene array databases: applications in mechanistic toxicology},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {507--517},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg436},
doi = {10.1093/BIOINFORMATICS/BTG436},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KarpinetsFF04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KashtanIMA04,
author = {Nadav Kashtan and
Shalev Itzkovitz and
Ron Milo and
Uri Alon},
title = {Efficient sampling algorithm for estimating subgraph concentrations
and detecting network motifs},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1746--1758},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth163},
doi = {10.1093/BIOINFORMATICS/BTH163},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/KashtanIMA04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KauerB04,
author = {Gerhard Kauer and
Helmut Bl{\"{o}}cker},
title = {Analysis of disturbed images},
journal = {Bioinform.},
volume = {20},
number = {9},
pages = {1381--1387},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth099},
doi = {10.1093/BIOINFORMATICS/BTH099},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KauerB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KaurR04,
author = {Harpreet Kaur and
G. P. S. Raghava},
title = {A neural network method for prediction of ?-turn types in proteins
using evolutionary information},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2751--2758},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth322},
doi = {10.1093/BIOINFORMATICS/BTH322},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KaurR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KawajiTM04,
author = {Hideya Kawaji and
Yoichi Takenaka and
Hideo Matsuda},
title = {Graph-based clustering for finding distant relationships in a large
set of protein sequences},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {243--252},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg397},
doi = {10.1093/BIOINFORMATICS/BTG397},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KawajiTM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KeithABCLM04,
author = {Jonathan M. Keith and
Peter Adams and
Darryn E. Bryant and
Duncan A. E. Cochran and
Gita H. Lala and
Keith R. Mitchelson},
title = {Algorithms for sequence analysis via mutagenesis},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2401--2410},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth258},
doi = {10.1093/BIOINFORMATICS/BTH258},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/KeithABCLM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KelYVW04,
author = {Alexander E. Kel and
Yuri Tikunov and
Nico Voss and
Edgar Wingender},
title = {Recognition of multiple patterns in unaligned sets of sequences: comparison
of kernel clustering method with other methods},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1512--1516},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth111},
doi = {10.1093/BIOINFORMATICS/BTH111},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KelYVW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KelesLV04,
author = {S{\"{u}}nd{\"{u}}z Keles and
Mark J. van der Laan and
Chris Vulpe},
title = {Regulatory motif finding by logic regression},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2799--2811},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth333},
doi = {10.1093/BIOINFORMATICS/BTH333},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KelesLV04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KerkhovenEBMS04,
author = {Robert Kerkhoven and
Frank H. J. van Enckevort and
Jos Boekhorst and
Douwe Molenaar and
Roland J. Siezen},
title = {Visualization for genomics: the Microbial Genome Viewer},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1812--1814},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth159},
doi = {10.1093/BIOINFORMATICS/BTH159},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/KerkhovenEBMS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KiehlMS04,
author = {Thomas R. Kiehl and
Robert M. Mattheyses and
Melvin K. Simmons},
title = {Hybrid simulation of cellular behavior},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {316--322},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg409},
doi = {10.1093/BIOINFORMATICS/BTG409},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KiehlMS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Kim04,
author = {Saejoon Kim},
title = {Protein {\ss}-turn prediction using nearest-neighbor method},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {40--44},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg368},
doi = {10.1093/BIOINFORMATICS/BTG368},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Kim04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KimBP04,
author = {Wan Kyu Kim and
Dan M. Bolser and
Jong H. Park},
title = {Large-scale co-evolution analysis of protein structural interlogues
using the global protein structural interactome map {(PSIMAP)}},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1138--1150},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth053},
doi = {10.1093/BIOINFORMATICS/BTH053},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KimBP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KimCPPK04,
author = {Jihoon Kim and
Hee{-}Joon Chung and
Chan Hee Park and
Woong{-}Yang Park and
Ju Han Kim},
title = {ChromoViz: multimodal visualization of gene expression data onto chromosomes
using scalable vector graphics},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1191--1192},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth052},
doi = {10.1093/BIOINFORMATICS/BTH052},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KimCPPK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KimLOKK04,
author = {Jong{-}Hun Kim and
Juyoung Lee and
Bermseok Oh and
Kuchan Kimm and
InSong Koh},
title = {Prediction of phosphorylation sites using SVMs},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3179--3184},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth382},
doi = {10.1093/BIOINFORMATICS/BTH382},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KimLOKK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KimuraKHNKK04,
author = {Shuhei Kimura and
Takuji Kawasaki and
Mariko Hatakeyama and
Takashi Naka and
Fumikazu Konishi and
Akihiko Konagaya},
title = {OBIYagns: a grid-based biochemical simulator with a parameter estimator},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1646--1648},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth122},
doi = {10.1093/BIOINFORMATICS/BTH122},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KimuraKHNKK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KingPJ04,
author = {Andrew D. King and
Natasa Przulj and
Igor Jurisica},
title = {Protein complex prediction via cost-based clustering},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3013--3020},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth351},
doi = {10.1093/BIOINFORMATICS/BTH351},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KingPJ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KingWC04,
author = {Ross D. King and
Paul H. Wise and
Amanda Clare},
title = {Confirmation of data mining based predictions of protein function},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1110--1118},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth047},
doi = {10.1093/BIOINFORMATICS/BTH047},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KingWC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KinjoN04,
author = {Akira R. Kinjo and
Ken Nishikawa},
title = {Eigenvalue analysis of amino acid substitution matrices reveals a
sharp transition of the mode of sequence conservation in proteins},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2504--2508},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth297},
doi = {10.1093/BIOINFORMATICS/BTH297},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KinjoN04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KinoshitaN04,
author = {Kengo Kinoshita and
Haruki Nakamura},
title = {eF-site and PDBjViewer: database and viewer for protein functional
sites},
journal = {Bioinform.},
volume = {20},
number = {8},
pages = {1329--1330},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth073},
doi = {10.1093/BIOINFORMATICS/BTH073},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KinoshitaN04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KirbyDLM04,
author = {Nigel I. Kirby and
Eugene F. DeRose and
Robert E. London and
Geoffrey A. Mueller},
title = {NvAssign: protein {NMR} spectral assignment with NMRView},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1201--1203},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth064},
doi = {10.1093/BIOINFORMATICS/BTH064},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KirbyDLM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KlamtG04,
author = {Steffen Klamt and
Ernst Dieter Gilles},
title = {Minimal cut sets in biochemical reaction networks},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {226--234},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg395},
doi = {10.1093/BIOINFORMATICS/BTG395},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KlamtG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KnowltonDC04,
author = {Nicholas Knowlton and
Igor Dozmorov and
Michael Centola},
title = {Microarray Data Analysis Toolbox {(MDAT):} for normalization, adjustment
and analysis of gene expression data},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3687--3690},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth424},
doi = {10.1093/BIOINFORMATICS/BTH424},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/KnowltonDC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KochetovS04,
author = {Alexey V. Kochetov and
Akinori Sarai},
title = {Translational polymorphism as a potential source of plant proteins
variety in \emph{Arabidopsis thaliana}},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {445--447},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg443},
doi = {10.1093/BIOINFORMATICS/BTG443},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KochetovS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KoenigG04,
author = {Matthias Koenig and
Niels Grabe},
title = {Highly specific prediction of phosphorylation sites in proteins},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3620--3627},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth455},
doi = {10.1093/BIOINFORMATICS/BTH455},
timestamp = {Fri, 22 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KoenigG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KonigE04,
author = {Rainer K{\"{o}}nig and
Roland Eils},
title = {Gene expression analysis on biochemical networks using the Potts spin
model},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1500--1505},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth109},
doi = {10.1093/BIOINFORMATICS/BTH109},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KonigE04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KorotkiyMDHL04,
author = {Maksym Korotkiy and
Rutger Middelburg and
Henk Dekker and
Frank van Harmelen and
Jan Lankelma},
title = {A tool for gene expression based PubMed search through combining data
sources},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1980--1982},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth183},
doi = {10.1093/BIOINFORMATICS/BTH183},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KorotkiyMDHL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KoumYNS04,
author = {Guillaume Koum and
Augustin Yekel and
Bengyella Ndifon and
Fr{\'{e}}d{\'{e}}ric Simard},
title = {Design and implementation of a mosquito database through an entomological
ontology},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2205--2211},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth221},
doi = {10.1093/BIOINFORMATICS/BTH221},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KoumYNS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KowalskiDSP04,
author = {Jeanne Kowalski and
Charles G. Drake and
Ronald H. Schwartz and
Jonathan Powell},
title = {Non-parametric, hypothesis-based analysis of microarrays for comparison
of several phenotypes},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {364--373},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg418},
doi = {10.1093/BIOINFORMATICS/BTG418},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KowalskiDSP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KrasnogorP04,
author = {Natalio Krasnogor and
David A. Pelta},
title = {Measuring the similarity of protein structures by means of the universal
similarity metric},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1015--1021},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth031},
doi = {10.1093/BIOINFORMATICS/BTH031},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KrasnogorP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KrebsB04,
author = {Werner G. Krebs and
Philip E. Bourne},
title = {Statistically rigorous automated protein annotation},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1066--1073},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth039},
doi = {10.1093/BIOINFORMATICS/BTH039},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KrebsB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KreilKL04,
author = {David P. Kreil and
Natasha A. Karp and
Kathryn S. Lilley},
title = {{DNA} microarray normalization methods can remove bias from differential
protein expression analysis of 2D difference gel electrophoresis results},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {2026--2034},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth193},
doi = {10.1093/BIOINFORMATICS/BTH193},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KreilKL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KrishnanT04,
author = {Arun Krishnan and
Francis Tang},
title = {Exhaustive whole-genome tandem repeats search},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2702--2710},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth311},
doi = {10.1093/BIOINFORMATICS/BTH311},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KrishnanT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KuangLY04,
author = {Rui Kuang and
Christina S. Leslie and
An{-}Suei Yang},
title = {Protein backbone angle prediction with machine learning approaches},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1612--1621},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth136},
doi = {10.1093/BIOINFORMATICS/BTH136},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KuangLY04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Kukkonen04,
author = {Jyrki P. Kukkonen},
title = {Explicit formulation of different receptor-G-protein interactions
and effector regulation},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2411--2420},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth263},
doi = {10.1093/BIOINFORMATICS/BTH263},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Kukkonen04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KutalikIGHBHCW04,
author = {Zolt{\'{a}}n Kutalik and
Jacqueline Inwald and
Steve V. Gordon and
R. Glyn Hewinson and
Philip D. Butcher and
Jason Hinds and
Kwang{-}Hyun Cho and
Olaf Wolkenhauer},
title = {Advanced significance analysis of microarray data based on weighted
resampling: a comparative study and application to gene deletions
in Mycobacterium bovis},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {357--363},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg417},
doi = {10.1093/BIOINFORMATICS/BTG417},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/KutalikIGHBHCW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KyodaBOK04,
author = {Koji Kyoda and
Kotaro Baba and
Shuichi Onami and
Hiroaki Kitano},
title = {{DBRF-MEGN} method: an algorithm for deducing minimum equivalent gene
networks from large-scale gene expression profiles of gene deletion
mutants},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2662--2675},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth306},
doi = {10.1093/BIOINFORMATICS/BTH306},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KyodaBOK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LaiWCZ04,
author = {Yinglei Lai and
Baolin Wu and
Liang Chen and
Hongyu Zhao},
title = {A statistical method for identifying differential gene-gene co-expression
patterns},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3146--3155},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth379},
doi = {10.1093/BIOINFORMATICS/BTH379},
timestamp = {Thu, 28 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LaiWCZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LamersBDCS04,
author = {Susanna L. Lamers and
Scott Beason and
Luke Dunlap and
Robert Compton and
Marco Salemi},
title = {HIVbase: a PC/Windows-based software offering storage and querying
power for locally held {HIV-1} genetic, experimental and clinical
data},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {436--438},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg445},
doi = {10.1093/BIOINFORMATICS/BTG445},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LamersBDCS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LanckrietBCJN04,
author = {Gert R. G. Lanckriet and
Tijl De Bie and
Nello Cristianini and
Michael I. Jordan and
William Stafford Noble},
title = {A statistical framework for genomic data fusion},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2626--2635},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth294},
doi = {10.1093/BIOINFORMATICS/BTH294},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LanckrietBCJN04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LanktreeVMK04,
author = {M. B. Lanktree and
L. VanderBeek and
Fabio Macciardi and
James L. Kennedy},
title = {PedSplit: pedigree management for stratified analysis},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2315--2316},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth224},
doi = {10.1093/BIOINFORMATICS/BTH224},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LanktreeVMK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LavalE04,
author = {Guillaume Laval and
Laurent Excoffier},
title = {{SIMCOAL} 2.0: a program to simulate genomic diversity over large
recombining regions in a subdivided population with a complex history},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2485--2487},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth264},
doi = {10.1093/BIOINFORMATICS/BTH264},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LavalE04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LavigneSV04,
author = {Rob Lavigne and
W. D. Sun and
Guido Volckaert},
title = {PHIRE, a deterministic approach to reveal regulatory elements in bacteriophage
genomes},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {629--635},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg456},
doi = {10.1093/BIOINFORMATICS/BTG456},
timestamp = {Thu, 17 Nov 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LavigneSV04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LavorgnaSGLC04,
author = {Giovanni Lavorgna and
Luca Sessa and
Alessandro Guffanti and
Lelio Lassandro and
Giorgio Casari},
title = {AntiHunter: searching {BLAST} output for {EST} antisense transcripts},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {583--585},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg460},
doi = {10.1093/BIOINFORMATICS/BTG460},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LavorgnaSGLC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LawrenceMNRS04,
author = {Neil D. Lawrence and
Marta Milo and
Mahesan Niranjan and
Penny Rashbass and
Stephan Soullier},
title = {Reducing the variability in cDNA microarray image processing by Bayesian
inference},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {518--526},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg438},
doi = {10.1093/BIOINFORMATICS/BTG438},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LawrenceMNRS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LawrenceZDM04,
author = {Carolyn J. Lawrence and
Christian M. Zmasek and
R. Kelly Dawe and
Russell L. Malmberg},
title = {LumberJack: a heuristic tool for sequence alignment exploration and
phylogenetic inference},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1977--1979},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth180},
doi = {10.1093/BIOINFORMATICS/BTH180},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LawrenceZDM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LazzaratoFBCC04,
author = {Fulvio Lazzarato and
Giuliana Franceschinis and
Marco Botta and
Francesca Cordero and
Raffaele A. Calogero},
title = {{RRE:} a tool for the extraction of non-coding regions surrounding
annotated genes from genomic datasets},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2848--2850},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth287},
doi = {10.1093/BIOINFORMATICS/BTH287},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LazzaratoFBCC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Leader04,
author = {David P. Leader},
title = {BugView: a browser for comparing genomes},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {129--130},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg383},
doi = {10.1093/BIOINFORMATICS/BTG383},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Leader04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LeeCJKL04,
author = {Soojin Lee and
Min{-}Kyu Cho and
Jin{-}Won Jung and
Jai{-}Hoon Kim and
Weontae Lee},
title = {Exploring protein fold space by secondary structure prediction using
data distribution method on Grid platform},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3500--3507},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth435},
doi = {10.1093/BIOINFORMATICS/BTH435},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LeeCJKL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LeeHK04,
author = {Sung Geun Lee and
Junguk Hur and
Yang Seok Kim},
title = {A graph-theoretic modeling on {GO} space for biological interpretation
of gene clusters},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {381--388},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg420},
doi = {10.1093/BIOINFORMATICS/BTG420},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LeeHK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LeeHYSSY04,
author = {Kyongbum Lee and
Daehee Hwang and
Tadaaki Yokoyama and
George Stephanopoulos and
Gregory Stephanopoulos and
Martin L. Yarmush},
title = {Identification of optimal classification functions for biological
sample and state discrimination from metabolic profiling data},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {959--969},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth015},
doi = {10.1093/BIOINFORMATICS/BTH015},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LeeHYSSY04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LeeK04,
author = {Soohyun Lee and
Changwon Kang},
title = {{CHOISS} for selection of single nucleotide polymorphism markers on
interval regularity},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {581--582},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg458},
doi = {10.1093/BIOINFORMATICS/BTG458},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LeeK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LeeV04,
author = {W. H. Lee and
V. B. Vega},
title = {Heterogeneity detector: finding heterogeneous positions in Phred/Phrap
assemblies},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2863--2864},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth301},
doi = {10.1093/BIOINFORMATICS/BTH301},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LeeV04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LeinonenDBFLA04,
author = {Rasko Leinonen and
Federico Garcia Diez and
David Binns and
Wolfgang Fleischmann and
Rodrigo Lopez and
Rolf Apweiler},
title = {UniProt archive},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3236--3237},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth191},
doi = {10.1093/BIOINFORMATICS/BTH191},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LeinonenDBFLA04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LemkeHBRM04,
author = {Ney Lemke and
Fabiana Her{\'{e}}dia and
Cl{\'{a}}udia K. Barcellos and
Adriana Neves dos Reis and
Jos{\'{e}} C. M. Mombach},
title = {Essentiality and damage in metabolic networks},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {115--119},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg386},
doi = {10.1093/BIOINFORMATICS/BTG386},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LemkeHBRM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LepreRTS04,
author = {Jorge Lepre and
John Jeremy Rice and
Yuhai Tu and
Gustavo Stolovitzky},
title = {Genes@Work: an efficient algorithm for pattern discovery and multivariate
feature selection in gene expression data},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1033--1044},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth035},
doi = {10.1093/BIOINFORMATICS/BTH035},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LepreRTS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LeslieECWN04,
author = {Christina S. Leslie and
Eleazar Eskin and
Adiel Cohen and
Jason Weston and
William Stafford Noble},
title = {Mismatch string kernels for discriminative protein classification},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {467--476},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg431},
doi = {10.1093/BIOINFORMATICS/BTG431},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LeslieECWN04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LeslinAI04,
author = {Chesley M. Leslin and
Alexej Abyzov and
Valentin A. Ilyin},
title = {Structural exon database, SEDB, mapping exon boundaries on multiple
protein structures},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1801--1803},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth150},
doi = {10.1093/BIOINFORMATICS/BTH150},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LeslinAI04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LevenkovaGR04,
author = {Natasha Levenkova and
Qingjuan Gu and
John J. Rux},
title = {Gene specific siRNA selector},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {430--432},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg437},
doi = {10.1093/BIOINFORMATICS/BTG437},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LevenkovaGR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LewinSA0P04,
author = {J{\"{o}}rn Lewin and
Armin Otto Schmitt and
P{\'{e}}ter Adorj{\'{a}}n and
Thomas Hildmann and
Christian Piepenbrock},
title = {Quantitative {DNA} methylation analysis based on four-dye trace data
from direct sequencing of {PCR} amplificates},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3005--3012},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth346},
doi = {10.1093/BIOINFORMATICS/BTH346},
timestamp = {Mon, 10 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LewinSA0P04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiC04,
author = {Song Li and
Hui{-}Hsien Chou},
title = {{LUCY2:} an interactive {DNA} sequence quality trimming and vector
removal tool},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2865--2866},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth302},
doi = {10.1093/BIOINFORMATICS/BTH302},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiIK04,
author = {Kuo{-}Bin Li and
Praveen Issac and
Arun Krishnan},
title = {Predicting allergenic proteins using wavelet transform},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2572--2578},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth286},
doi = {10.1093/BIOINFORMATICS/BTH286},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiIK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiJKW04,
author = {Lugang Li and
Renchao Jin and
Poh{-}Lin Kok and
Honghui Wan},
title = {Pseudo-periodic partitions of biological sequences},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {295--306},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg404},
doi = {10.1093/BIOINFORMATICS/BTG404},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiJKW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiL04,
author = {Lexin Li and
Hongzhe Li},
title = {Dimension reduction methods for microarrays with application to censored
survival data},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3406--3412},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth415},
doi = {10.1093/BIOINFORMATICS/BTH415},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiUTT04,
author = {Leping Li and
David M. Umbach and
Paul Terry and
Jack A. Taylor},
title = {Application of the {GA/KNN} method to {SELDI} proteomics data},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1638--1640},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth098},
doi = {10.1093/BIOINFORMATICS/BTH098},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiUTT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiZO04,
author = {Tao Li and
Chengliang Zhang and
Mitsunori Ogihara},
title = {A comparative study of feature selection and multiclass classification
methods for tissue classification based on gene expression},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2429--2437},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth267},
doi = {10.1093/BIOINFORMATICS/BTH267},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiZO04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiaoCHH04,
author = {Ben{-}Yang Liao and
Yu{-}Jung Chang and
Jan{-}Ming Ho and
Ming{-}Jing Hwang},
title = {The UniMarker {(UM)} method for synteny mapping of large genomes},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3156--3165},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth380},
doi = {10.1093/BIOINFORMATICS/BTH380},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiaoCHH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiaoLSS04,
author = {J. G. Liao and
Yong Lin and
Zachariah E. Selvanayagam and
Weichung Joe Shih},
title = {A mixture model for estimating the local false discovery rate in {DNA}
microarray analysis},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2694--2701},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth310},
doi = {10.1093/BIOINFORMATICS/BTH310},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiaoLSS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiebelKP04,
author = {Urban Liebel and
Bjoern Kindler and
Rainer Pepperkok},
title = {??Harvester??: a fast meta search engine of human protein resources},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1962--1963},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth146},
doi = {10.1093/BIOINFORMATICS/BTH146},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiebelKP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LinMJS04,
author = {Simon M. Lin and
Patrick McConnell and
Kimberly F. Johnson and
Jennifer Shoemaker},
title = {MedlineR: an open source library in {R} for Medline literature data
mining},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3659--3661},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth404},
doi = {10.1093/BIOINFORMATICS/BTH404},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LinMJS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LinWSLWL04,
author = {Ming Lin and
Lee{-}Jen Wei and
William R. Sellers and
Marshall Lieberfarb and
Wing Hung Wong and
Cheng Li},
title = {dChipSNP: significance curve and clustering of SNP-array-based loss-of-heterozygosity
data},
journal = {Bioinform.},
volume = {20},
number = {8},
pages = {1233--1240},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth069},
doi = {10.1093/BIOINFORMATICS/BTH069},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LinWSLWL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LinderDSTRPW04,
author = {Roland Linder and
Dawn Dew and
Holger Sudhoff and
Dirk Theegarten and
Klaus Remberger and
Siegfried J. P{\"{o}}ppl and
Mathias Wagner II},
title = {The 'subsequent artificial neural network' {(SANN)} approach might
bring more classificatory power to ANN-based {DNA} microarray analyses},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3544--3552},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth441},
doi = {10.1093/BIOINFORMATICS/BTH441},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LinderDSTRPW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiuCKG04,
author = {Yan Liu and
Jaime G. Carbonell and
Judith Klein{-}Seetharaman and
Vanathi Gopalakrishnan},
title = {Comparison of probabilistic combination methods for protein secondary
structure prediction},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3099--3107},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth370},
doi = {10.1093/BIOINFORMATICS/BTH370},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiuCKG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiuGLNLWRB04,
author = {Lei Liu and
George Gong and
Yong Liu and
Shreedhar Natarajan and
Denis M. Larkin and
Annelie Everts{-}van der Wind and
Mark Rebeiz and
Jonathan E. Beever},
title = {Multi-species comparative mapping in silico using the {COMPASS} strategy},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {148--154},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth018},
doi = {10.1093/BIOINFORMATICS/BTH018},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiuGLNLWRB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiuJNSH04,
author = {Fang Liu and
Tor{-}Kristian Jenssen and
Vegard Nygaard and
John Sack and
Eivind Hovig},
title = {FigSearch: a figure legend indexing and classification system},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2880--2882},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth316},
doi = {10.1093/BIOINFORMATICS/BTH316},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiuJNSH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiuTMM04,
author = {Shaolin Liu and
Nicholas A. Tinker and
Stephen J. Molnar and
Diane E. Mather},
title = {EC{\_}oligos: automated and whole-genome primer design for exons within
one or between two genomes},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3668--3669},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth413},
doi = {10.1093/BIOINFORMATICS/BTH413},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiuTMM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiuWP04,
author = {Delong Liu and
Clarice R. Weinberg and
Shyamal D. Peddada},
title = {A geometric approach to determine association and coherence of the
activation times of cell-cycling genes under differing experimental
conditions},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2521--2528},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth274},
doi = {10.1093/BIOINFORMATICS/BTH274},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiuWP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiuY04,
author = {Y.{-}F. Liu and
Ueng{-}Cheng Yang},
title = {{SCA} db: spinocerebellar ataxia candidate gene database},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2656--2661},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth305},
doi = {10.1093/BIOINFORMATICS/BTH305},
timestamp = {Mon, 05 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiuY04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LjungbergHC04,
author = {Kajsa Ljungberg and
Sverker Holmgren and
{\"{O}}rjan Carlborg},
title = {Simultaneous search for multiple {QTL} using the global optimization
algorithm {DIRECT}},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1887--1895},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth175},
doi = {10.1093/BIOINFORMATICS/BTH175},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LjungbergHC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LuSGLWPAME04,
author = {Zhiyong Lu and
Duane Szafron and
Russell Greiner and
Paul Lu and
David S. Wishart and
Brett Poulin and
John Anvik and
Cam Macdonell and
Roman Eisner},
title = {Predicting subcellular localization of proteins using machine-learned
classifiers},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {547--556},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg447},
doi = {10.1093/BIOINFORMATICS/BTG447},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LuSGLWPAME04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LuanL04,
author = {Yihui Luan and
Hongzhe Li},
title = {Model-based methods for identifying periodically expressed genes based
on time course microarray gene expression data},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {332--339},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg413},
doi = {10.1093/BIOINFORMATICS/BTG413},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LuanL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LucT04,
author = {Phuong{-}Van Luc and
Paul Tempst},
title = {PINdb: a database of nuclear protein complexes from human and yeast},
journal = {Bioinform.},
volume = {20},
number = {9},
pages = {1413--1415},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth114},
doi = {10.1093/BIOINFORMATICS/BTH114},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LucT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LudemannWSK04,
author = {Alexander L{\"{u}}demann and
Daniel Weicht and
Joachim Selbig and
Joachim Kopka},
title = {PaVESy: Pathway Visualization and Editing System},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2841--2844},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth278},
doi = {10.1093/BIOINFORMATICS/BTH278},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LudemannWSK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LuoKBYZ04,
author = {Feng Luo and
Latifur Khan and
Farokh B. Bastani and
I{-}Ling Yen and
Jizhong Zhou},
title = {A dynamically growing self-organizing tree {(DGSOT)} for hierarchical
clustering gene expression profiles},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2605--2617},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth292},
doi = {10.1093/BIOINFORMATICS/BTH292},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/LuoKBYZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MaWC04,
author = {Chang{-}Xing Ma and
Rongling Wu and
George Casella},
title = {FunMap: functional mapping of complex traits},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1808--1811},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth156},
doi = {10.1093/BIOINFORMATICS/BTH156},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/MaWC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MaZYZ04,
author = {Hongwu Ma and
Xue{-}Ming Zhao and
Ying{-}Jin Yuan and
An{-}Ping Zeng},
title = {Decomposition of metabolic network into functional modules based on
the global connectivity structure of reaction graph},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1870--1876},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth167},
doi = {10.1093/BIOINFORMATICS/BTH167},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MaZYZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MailundP04,
author = {Thomas Mailund and
Christian N. S. Pedersen},
title = {QDist-quartet distance between evolutionary trees},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1636--1637},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth097},
doi = {10.1093/BIOINFORMATICS/BTH097},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MailundP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MailundP04a,
author = {Thomas Mailund and
Christian N. S. Pedersen},
title = {QuickJoin - fast neighbour-joining tree reconstruction},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3261--3262},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth359},
doi = {10.1093/BIOINFORMATICS/BTH359},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MailundP04a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MajeedARGKBNKCSGH04,
author = {Ahmed A. Majeed and
Niyaz Ahmed and
K. Rajender Rao and
S. Ghousunnissa and
Farhana Kauser and
Buddhaditta Bose and
Hampapathalu A. Nagarajaram and
V. M. Katoch and
Debby V. Cousins and
Leonardo A. Sechi and
Robert H. Gilman and
Seyed Ehetsham Hasnain},
title = {AmpliBASE MT\({}^{\mbox{TM}}\): a Mycobacterium tuberculosis diversity
knowledgebase},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {989--992},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth051},
doi = {10.1093/BIOINFORMATICS/BTH051},
timestamp = {Sun, 11 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MajeedARGKBNKCSGH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MajorosPS04,
author = {William H. Majoros and
Mihaela Pertea and
Steven Salzberg},
title = {TigrScan and GlimmerHMM: two open source ab initio eukaryotic gene-finders},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2878--2879},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth315},
doi = {10.1093/BIOINFORMATICS/BTH315},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MajorosPS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MakarenkovL04,
author = {Vladimir Makarenkov and
Fran{\c{c}}ois{-}Joseph Lapointe},
title = {A weighted least-squares approach for inferring phylogenies from incomplete
distance matrices},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {2113--2121},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth211},
doi = {10.1093/BIOINFORMATICS/BTH211},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/MakarenkovL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ManciniHODKYTN04,
author = {Adauto L. Mancini and
Roberto H. Higa and
Adilton G. Oliveira and
Fabiana Dominiquini and
Paula R. Kuser and
Michel E. B. Yamagishi and
Roberto C. Togawa and
Goran Neshich},
title = {{STING} Contacts: a web-based application for identification and analysis
of amino acid contacts within protein structure and across protein
interfaces},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {2145--2147},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth203},
doi = {10.1093/BIOINFORMATICS/BTH203},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ManciniHODKYTN04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ManduchiGHLMPWS04,
author = {Elisabetta Manduchi and
Gregory R. Grant and
H. He and
Junmin Liu and
Matthew D. Mailman and
Angel D. Pizarro and
Patricia L. Whetzel and
Christian J. Stoeckert Jr.},
title = {{RAD} and the {RAD} Study-Annotator: an approach to collection, organization
and exchange of all relevant information for high-throughput gene
expression studies},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {452--459},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg428},
doi = {10.1093/BIOINFORMATICS/BTG428},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ManduchiGHLMPWS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MansourianMAAFGMPRVR04,
author = {Robert Mansourian and
David M. Mutch and
Nicolas Antille and
Jerome Aubert and
Paul Fogel and
Jean{-}Marc Le Goff and
Julie Moulin and
Anton Petrov and
Andreas Rytz and
Johannes J. Voegel and
Matthew{-}Alan Roberts},
title = {The Global Error Assessment {(GEA)} model for the selection of differentially
expressed genes in microarray data},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2726--2737},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth319},
doi = {10.1093/BIOINFORMATICS/BTH319},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/MansourianMAAFGMPRVR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MaoR04,
author = {Linyong Mao and
Haluk Resat},
title = {Probabilistic representation of gene regulatory networks},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2258--2269},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth236},
doi = {10.1093/BIOINFORMATICS/BTH236},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MaoR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MarsdenA04,
author = {Brian Marsden and
Ruben Abagyan},
title = {{SAD} - a normalized structural alignment database: improving sequence-structure
alignments},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2333--2344},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth244},
doi = {10.1093/BIOINFORMATICS/BTH244},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MarsdenA04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Marshall04,
author = {Owen J. Marshall},
title = {PerlPrimer: cross-platform, graphical primer design for standard,
bisulphite and real-time {PCR}},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2471--2472},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth254},
doi = {10.1093/BIOINFORMATICS/BTH254},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/Marshall04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Martin04,
author = {Andrew C. R. Martin},
title = {PDBSprotEC: a Web-accessible database linking {PDB} chains to {EC}
numbers via SwissProt},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {986--988},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth048},
doi = {10.1093/BIOINFORMATICS/BTH048},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/Martin04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Martinez-BuenoMPRT04,
author = {Manuel Mart{\'{\i}}nez{-}Bueno and
Antonio J. Molina{-}Henares and
Eduardo Pareja and
Juan L. Ramos and
Raquel Tobes},
title = {BacTregulators: a database of transcriptional regulators in bacteria
and archaea},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2787--2791},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth330},
doi = {10.1093/BIOINFORMATICS/BTH330},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Martinez-BuenoMPRT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MasseroliSMAP04,
author = {Marco Masseroli and
Andrea Stella and
Natalia Meani and
Myriam Alcalay and
Francesco Pinciroli},
title = {MyWEST: My Web Extraction Software Tool for effective mining of annotations
from web-based databanks},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3326--3335},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth392},
doi = {10.1093/BIOINFORMATICS/BTH392},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MasseroliSMAP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MatukumalliGST04,
author = {Lakshmi K. Matukumalli and
John J. Grefenstette and
Tad S. Sonstegard and
Curtis P. Van Tassell},
title = {{EST-PAGE} - managing and analyzing {EST} data},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {286--288},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg411},
doi = {10.1093/BIOINFORMATICS/BTG411},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MatukumalliGST04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MayBK04,
author = {Patrick May and
Stefan Barthel and
Ina Koch},
title = {{PTGL} - a web-based database application for protein topologies},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3277--3279},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth367},
doi = {10.1093/BIOINFORMATICS/BTH367},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MayBK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/McAuliffePJ04,
author = {Jon D. McAuliffe and
Lior Pachter and
Michael I. Jordan},
title = {Multiple-sequence functional annotation and the generalized hidden
Markov phylogeny},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1850--1860},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth153},
doi = {10.1093/BIOINFORMATICS/BTH153},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/McAuliffePJ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/McDonaldCSM04,
author = {Daniel McDonald and
Hsinchun Chen and
Hua Su and
Byron Marshall},
title = {Extracting gene pathway relations using a hybrid grammar: the Arizona
Relation Parser},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3370--3378},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth409},
doi = {10.1093/BIOINFORMATICS/BTH409},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/McDonaldCSM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/McDonaldWMJWP04,
author = {Ryan T. McDonald and
R. Scott Winters and
Mark A. Mandel and
Yang Jin and
Peter S. White and
Fernando C. N. Pereira},
title = {An entity tagger for recognizing acquired genomic variations in cancer
literature},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3249--3251},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth350},
doi = {10.1093/BIOINFORMATICS/BTH350},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/McDonaldWMJWP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/McGuffinSSJ04,
author = {Liam J. McGuffin and
Stefano A. Street and
S{\o}ren{-}Aksel S{\o}rensen and
David T. Jones},
title = {The Genomic Threading Database},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {131--132},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg387},
doi = {10.1093/BIOINFORMATICS/BTG387},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/McGuffinSSJ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/McHardyGPM04,
author = {Alice Carolyn McHardy and
Alexander Goesmann and
Alfred P{\"{u}}hler and
Folker Meyer},
title = {Development of joint application strategies for two microbial gene
finders},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1622--1631},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth137},
doi = {10.1093/BIOINFORMATICS/BTH137},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/McHardyGPM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MedvedovicYB04,
author = {Mario Medvedovic and
Ka Yee Yeung and
Roger Eugene Bumgarner},
title = {Bayesian mixture model based clustering of replicated microarray data},
journal = {Bioinform.},
volume = {20},
number = {8},
pages = {1222--1232},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth068},
doi = {10.1093/BIOINFORMATICS/BTH068},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MedvedovicYB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MelkoM04,
author = {O. Michael Melko and
Arcady R. Mushegian},
title = {Distribution of words with a predefined range of mismatches to a {DNA}
probe in bacterial genomes},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {67--74},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg374},
doi = {10.1093/BIOINFORMATICS/BTG374},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MelkoM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MengZL04,
author = {Shao{-}Wu Meng and
Zhuo Zhang and
Jinyan Li},
title = {Twelve {C2H2} zinc-finger genes on human chromosome 19 can be each
translated into the same type of protein after frameshifts},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {1--4},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg381},
doi = {10.1093/BIOINFORMATICS/BTG381},
timestamp = {Fri, 16 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/MengZL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MeskauskasLJ04,
author = {Audrius Meskauskas and
Frank Lehmann{-}Horn and
Karin Jurkat{-}Rott},
title = {Sight: automating genomic data-mining without programming skills},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1718--1720},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth151},
doi = {10.1093/BIOINFORMATICS/BTH151},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MeskauskasLJ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Mewes04,
author = {Hans{-}Werner Mewes},
title = {German Conference on Bioinformatics 2003 (GCB'03)},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1481},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth353},
doi = {10.1093/BIOINFORMATICS/BTH353},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Mewes04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Midford04,
author = {Peter E. Midford},
title = {Ontologies for Behavior},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3700--3701},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth433},
doi = {10.1093/BIOINFORMATICS/BTH433},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Midford04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MignoneHP04,
author = {Flavio Mignone and
David Stephen Horner and
Graziano Pesole},
title = {WebVar: a resource for the rapid estimation of relative site variability
from multiple sequence alignments},
journal = {Bioinform.},
volume = {20},
number = {8},
pages = {1331--1333},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth076},
doi = {10.1093/BIOINFORMATICS/BTH076},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MignoneHP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Miguel04,
author = {Ricardo N{\'{u}}{\~{n}}ez Miguel},
title = {Sequence patterns derived from the automated prediction of functional
residues in structurally-aligned homologous protein families},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2380--2389},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth255},
doi = {10.1093/BIOINFORMATICS/BTH255},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Miguel04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MilneWRMHM04,
author = {Iain Milne and
Frank Wright and
Glenn Rowe and
David F. Marshall and
Dirk Husmeier and
Gr{\'{a}}inne McGuire},
title = {TOPALi: software for automatic identification of recombinant sequences
within {DNA} multiple alignments},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1806--1807},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth155},
doi = {10.1093/BIOINFORMATICS/BTH155},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/MilneWRMHM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MinakuchiIK04,
author = {Yohei Minakuchi and
Masahiro Ito and
Yuji Kohara},
title = {{SPI:} a tool for incorporating gene expression data into a four-dimensional
database of Caenorhabditis elegans embryogenesis},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1097--1109},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth045},
doi = {10.1093/BIOINFORMATICS/BTH045},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MinakuchiIK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MitchellZCC04,
author = {Adele A. Mitchell and
Michael E. Zwick and
Aravinda Chakravarti and
David J. Cutler},
title = {Discrepancies in dbSNP confirmation rates and allele frequency distributions
from varying genotyping error rates and patterns},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1022--1032},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth034},
doi = {10.1093/BIOINFORMATICS/BTH034},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MitchellZCC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MoreiraM04,
author = {Andr{\'{e}}s Moreira and
Alejandro Maass},
title = {{TIP:} protein backtranslation aided by genetic algorithms},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {2148--2149},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth204},
doi = {10.1093/BIOINFORMATICS/BTH204},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MoreiraM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MuellerA04,
author = {Jakob C. Mueller and
Christophe Andreoli},
title = {Plotting haplotype-specific linkage disequilibrium patterns by extended
haplotype homozygosity},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {786--787},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg481},
doi = {10.1093/BIOINFORMATICS/BTG481},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MuellerA04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MurphyRWW04,
author = {Kevin Murphy and
Towfique Raj and
R. Scott Winters and
Peter S. White},
title = {me-PCR: a refined ultrafast algorithm for identifying sequence-defined
genomic elements},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {588--590},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg466},
doi = {10.1093/BIOINFORMATICS/BTG466},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MurphyRWW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MyersDKT04,
author = {Chad L. Myers and
Maitreya J. Dunham and
Sun{-}Yuan Kung and
Olga G. Troyanskaya},
title = {Accurate detection of aneuploidies in array {CGH} and gene expression
microarray data},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3533--3543},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth440},
doi = {10.1093/BIOINFORMATICS/BTH440},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MyersDKT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NagarajanY04,
author = {Niranjan Nagarajan and
Golan Yona},
title = {Automatic prediction of protein domains from sequence information
using a hybrid learning system},
journal = {Bioinform.},
volume = {20},
number = {9},
pages = {1335--1360},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth086},
doi = {10.1093/BIOINFORMATICS/BTH086},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/NagarajanY04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NeuhauserS04,
author = {Markus Neuh{\"{a}}user and
Roswitha Senske},
title = {The Baumgartner-Wei?-Schindler test for the detection of differentially
expressed genes in replicated microarray experiments},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3553--3564},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth442},
doi = {10.1093/BIOINFORMATICS/BTH442},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NeuhauserS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NguyenLGM04,
author = {Tu H. Nguyen and
Chunyu Liu and
Elliot S. Gershon and
Francis J. McMahon},
title = {Frequency Finder: a multi-source web application for collection of
public allele frequencies of {SNP} markers},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {439--443},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg446},
doi = {10.1093/BIOINFORMATICS/BTG446},
timestamp = {Wed, 20 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NguyenLGM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NielsenLWSLBBL04,
author = {Morten Nielsen and
Claus Lundegaard and
Peder Worning and
Christina Sylvester{-}Hvid and
Kasper Lamberth and
S{\o}ren Buus and
S{\o}ren Brunak and
Ole Lund},
title = {Improved prediction of {MHC} class {I} and class {II} epitopes using
a novel Gibbs sampling approach},
journal = {Bioinform.},
volume = {20},
number = {9},
pages = {1388--1397},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth100},
doi = {10.1093/BIOINFORMATICS/BTH100},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NielsenLWSLBBL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NilssonFHF04,
author = {Jens Nilsson and
Thoas Fioretos and
Mattias H{\"{o}}glund and
Magnus Fontes},
title = {Approximate geodesic distances reveal biologically relevant structures
in microarray data},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {874--880},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg496},
doi = {10.1093/BIOINFORMATICS/BTG496},
timestamp = {Thu, 27 Jul 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/NilssonFHF04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NilssonLU04,
author = {R. Henrik Nilsson and
Karl{-}Henrik Larsson and
Bj{\"{o}}rn M. Ursing},
title = {galaxie-CGI scripts for sequence identification through automated
phylogenetic analysis},
journal = {Bioinform.},
volume = {20},
number = {9},
pages = {1447--1452},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth119},
doi = {10.1093/BIOINFORMATICS/BTH119},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NilssonLU04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NiuH04,
author = {Tianhua Niu and
Zhenjun Hu},
title = {SNPicker: a graphical tool for primer picking in designing mutagenic
endonuclease restriction assays},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3263--3265},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth360},
doi = {10.1093/BIOINFORMATICS/BTH360},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NiuH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ODonoghueMSF04,
author = {Se{\'{a}}n I. O'Donoghue and
Joachim E. W. Meyer and
Andrea Schafferhans and
Karsten Fries},
title = {The {SRS} 3D module: integrating structures, sequences and features},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2476--2478},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth260},
doi = {10.1093/BIOINFORMATICS/BTH260},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ODonoghueMSF04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/OhsenSZL04,
author = {Niklas von {\"{O}}hsen and
Ingolf Sommer and
Ralf Zimmer and
Thomas Lengauer},
title = {Arby: automatic protein structure prediction using profile-profile
alignment and confidence measures},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2228--2235},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth232},
doi = {10.1093/BIOINFORMATICS/BTH232},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/OhsenSZL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/OinnAFMSGCGPWL04,
author = {Thomas M. Oinn and
Matthew Addis and
Justin Ferris and
Darren Marvin and
Martin Senger and
Robert Mark Greenwood and
Tim Carver and
Kevin Glover and
Matthew R. Pocock and
Anil Wipat and
Peter Li},
title = {Taverna: a tool for the composition and enactment of bioinformatics
workflows},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3045--3054},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth361},
doi = {10.1093/BIOINFORMATICS/BTH361},
timestamp = {Sun, 06 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/OinnAFMSGCGPWL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/OlivierS04,
author = {Brett G. Olivier and
Jacky L. Snoep},
title = {Web-based kinetic modelling using {JWS} Online},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {2143--2144},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth200},
doi = {10.1093/BIOINFORMATICS/BTH200},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/OlivierS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/OlsenHETO04,
author = {Line Olsen and
Morten Hansen and
Claus Thorn Ekstr{\o}m and
Jesper T. Troelsen and
J{\o}rgen Olsen},
title = {{CVD:} the intestinal crypt/villus in situ hybridization database},
journal = {Bioinform.},
volume = {20},
number = {8},
pages = {1327--1328},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth072},
doi = {10.1093/BIOINFORMATICS/BTH072},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/OlsenHETO04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/OmontK04,
author = {Nicolas Omont and
Fran{\c{c}}ois K{\'{e}}p{\`{e}}s},
title = {Transcription/replication collisions cause bacterial transcription
units to be longer on the leading strand of replication},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2719--2725},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth317},
doi = {10.1093/BIOINFORMATICS/BTH317},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/OmontK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/OrlevSS04,
author = {Nir Orlev and
Ron Shamir and
Yosef Shiloh},
title = {{PIVOT:} Protein Interacions VisualizatiOn Tool},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {424--425},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg426},
doi = {10.1093/BIOINFORMATICS/BTG426},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/OrlevSS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/OrtonSG04,
author = {Richard J. Orton and
William I. Sellers and
Dietlind L. Gerloff},
title = {{YETI:} Yeast Exploration Tool Integrator},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {284--285},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg408},
doi = {10.1093/BIOINFORMATICS/BTG408},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/OrtonSG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/OsadaZS04,
author = {Robert Osada and
Elena Zaslavsky and
Mona Singh},
title = {Comparative analysis of methods for representing and searching for
transcription factor binding sites},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3516--3525},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth438},
doi = {10.1093/BIOINFORMATICS/BTH438},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/OsadaZS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/OuyangWG04,
author = {Ming Ouyang and
William J. Welsh and
Panos Georgopoulos},
title = {Gaussian mixture clustering and imputation of microarray data},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {917--923},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth007},
doi = {10.1093/BIOINFORMATICS/BTH007},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/OuyangWG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PandeyGKDSD04,
author = {Neeraj Pandey and
Mythily Ganapathi and
Kaushal Kumar and
Dipayan Dasgupta and
Sushanta Kumar Das Sutar and
Debasis Dash},
title = {Comparative analysis of protein unfoldedness in human housekeeping
and non-housekeeping proteins},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {2904--2910},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth344},
doi = {10.1093/BIOINFORMATICS/BTH344},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/PandeyGKDSD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PandeyGM04,
author = {Ritu Pandey and
Raghavendra K. Guru and
David W. Mount},
title = {Pathway Miner: extracting gene association networks from molecular
pathways for predicting the biological significance of gene expression
microarray data},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {2156--2158},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth215},
doi = {10.1093/BIOINFORMATICS/BTH215},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PandeyGM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ParadisCS04,
author = {Emmanuel Paradis and
Julien Claude and
Korbinian Strimmer},
title = {{APE:} Analyses of Phylogenetics and Evolution in {R} language},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {289--290},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg412},
doi = {10.1093/BIOINFORMATICS/BTG412},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ParadisCS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ParkinsonAWSHB04,
author = {John Parkinson and
Alasdair Anthony and
James Wasmuth and
Ralf Schmid and
Ann Hedley and
Mark L. Blaxter},
title = {PartiGene-constructing partial genomes},
journal = {Bioinform.},
volume = {20},
number = {9},
pages = {1398--1404},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth101},
doi = {10.1093/BIOINFORMATICS/BTH101},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ParkinsonAWSHB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ParrLCB04,
author = {Cynthia Sims Parr and
Bongshin Lee and
Dana Campbell and
Benjamin B. Bederson},
title = {Visualizations for taxonomic and phylogenetic trees},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {2997--3004},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth345},
doi = {10.1093/BIOINFORMATICS/BTH345},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ParrLCB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PasquierGFC04,
author = {Claude Pasquier and
Fabrice Girardot and
K. Jevardat de Fombelle and
Richard Christen},
title = {{THEA:} ontology-driven analysis of microarray data},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2636--2643},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth295},
doi = {10.1093/BIOINFORMATICS/BTH295},
timestamp = {Thu, 30 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/PasquierGFC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PavlidisWN04,
author = {Paul Pavlidis and
Ilan Wapinski and
William Stafford Noble},
title = {Support vector machine classification on the web},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {586--587},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg461},
doi = {10.1093/BIOINFORMATICS/BTG461},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PavlidisWN04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PekurovskySB04,
author = {Dmitry Pekurovsky and
Ilya N. Shindyalov and
Philip E. Bourne},
title = {A case study of high-throughput biological data processing on parallel
platforms},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1940--1947},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth184},
doi = {10.1093/BIOINFORMATICS/BTH184},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PekurovskySB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Perez-EncisoM04,
author = {Miguel P{\'{e}}rez{-}Enciso and
Ignacy Misztal},
title = {Qxpak: a versatile mixed model application for genetical genomics
and {QTL} analyses},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2792--2798},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth331},
doi = {10.1093/BIOINFORMATICS/BTH331},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Perez-EncisoM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PerezPBTA04,
author = {Antonio J. P{\'{e}}rez{-}Pulido and
Carolina Perez{-}Iratxeta and
Peer Bork and
Guillermo Thode and
Miguel A. Andrade},
title = {Gene annotation from scientific literature using mappings between
keyword systems},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {2084--2091},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth207},
doi = {10.1093/BIOINFORMATICS/BTH207},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PerezPBTA04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PerezTT04,
author = {Antonio J. P{\'{e}}rez{-}Pulido and
Guillermo Thode and
Oswaldo Trelles},
title = {AnaGram: protein function assignment},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {291--292},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg414},
doi = {10.1093/BIOINFORMATICS/BTG414},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PerezTT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PetterssonJC04,
author = {Fredrik Pettersson and
Oskar Jonsson and
Lon R. Cardon},
title = {GOLDsurfer: three dimensional display of linkage disequilibrium},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3241--3243},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth341},
doi = {10.1093/BIOINFORMATICS/BTH341},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PetterssonJC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Pevzner04,
author = {Pavel A. Pevzner},
title = {Educating biologists in the 21st century: bioinformatics scientists
versus bioinformatics technicians},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2159--2161},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth217},
doi = {10.1093/BIOINFORMATICS/BTH217},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Pevzner04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PhamCTN04,
author = {Tuan D. Pham and
Denis I. Crane and
Tuan H. Tran and
Tam H. Nguyen},
title = {Extraction of fluorescent cell puncta by adaptive fuzzy segmentation},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2189--2196},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth213},
doi = {10.1093/BIOINFORMATICS/BTH213},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PhamCTN04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PhamZ04,
author = {Tuan D. Pham and
Johannes Zuegg},
title = {A probabilistic measure for alignment-free sequence comparison},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3455--3461},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth426},
doi = {10.1093/BIOINFORMATICS/BTH426},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PhamZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Philippi04,
author = {Stephan Philippi},
title = {Light-weight integration of molecular biological databases},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {51--57},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg372},
doi = {10.1093/BIOINFORMATICS/BTG372},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Philippi04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PhuongLL04,
author = {Tu Minh Phuong and
Doheon Lee and
Kwang Hyung Lee},
title = {Regression trees for regulatory element identification},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {750--757},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg480},
doi = {10.1093/BIOINFORMATICS/BTG480},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PhuongLL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PielerSHTT04,
author = {Roland Pieler and
F{\'{a}}tima S{\'{a}}nchez{-}Cabo and
Hubert Hackl and
Gerhard G. Thallinger and
Zlatko Trajanoski},
title = {ArrayNorm: comprehensive normalization and analysis of microarray
data},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1971--1973},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth174},
doi = {10.1093/BIOINFORMATICS/BTH174},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PielerSHTT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PochetSSM04,
author = {Nathalie Pochet and
Frank De Smet and
Johan A. K. Suykens and
Bart De Moor},
title = {Systematic benchmarking of microarray data classification: assessing
the role of non-linearity and dimensionality reduction},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3185--3195},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth383},
doi = {10.1093/BIOINFORMATICS/BTH383},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PochetSSM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PonsMTD04,
author = {Jean{-}Luc Pons and
Therese E. Malliavin and
Dominique Tramesel and
Marc{-}Andr{\'{e}} Delsuc},
title = {NMRb: a web-site repository for raw {NMR} datasets},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3707--3709},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth450},
doi = {10.1093/BIOINFORMATICS/BTH450},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PonsMTD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PorolloAM04,
author = {Aleksey A. Porollo and
Rafal Adamczak and
Jaroslaw Meller},
title = {{POLYVIEW:} a flexible visualization tool for structural and functional
annotations of proteins},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2460--2462},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth248},
doi = {10.1093/BIOINFORMATICS/BTH248},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PorolloAM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PoundsC04,
author = {Stan Pounds and
Cheng Cheng},
title = {Improving false discovery rate estimation},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1737--1745},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth160},
doi = {10.1093/BIOINFORMATICS/BTH160},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PoundsC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PournaraW04,
author = {Iosifina Pournara and
Lorenz Wernisch},
title = {Reconstruction of gene networks using Bayesian learning and manipulation
experiments},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {2934--2942},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth337},
doi = {10.1093/BIOINFORMATICS/BTH337},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PournaraW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PoustelnikovaPBSR04,
author = {Ekaterina Poustelnikova and
Andrei Pisarev and
Maxim Blagov and
Maria Samsonova and
John Reinitz},
title = {A database for management of gene expression data in situ},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2212--2221},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth222},
doi = {10.1093/BIOINFORMATICS/BTH222},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PoustelnikovaPBSR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PrakashKDDB04,
author = {Tulika Prakash and
Mamta Khandelwal and
Dipayan Dasgupta and
Debasis Dash and
Samir K. Brahmachari},
title = {CoPS: Comprehensive Peptide Signature Database},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2886--2888},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth325},
doi = {10.1093/BIOINFORMATICS/BTH325},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/PrakashKDDB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PriceR04,
author = {Morgan N. Price and
Eleanor Gilbert Rieffel},
title = {Finding coexpressed genes in counts-based data: an improved measure
with validation experiments},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {945--952},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth011},
doi = {10.1093/BIOINFORMATICS/BTH011},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PriceR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PrlicDLS04,
author = {Andreas Prlic and
Francisco S. Domingues and
Peter Lackner and
Manfred J. Sippl},
title = {{WILMA} - automated annotation of protein sequences},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {127--128},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg380},
doi = {10.1093/BIOINFORMATICS/BTG380},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PrlicDLS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PrzuljCJ04,
author = {Natasa Przulj and
Derek G. Corneil and
Igor Jurisica},
title = {Modeling interactome: scale-free or geometric?},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3508--3515},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth436},
doi = {10.1093/BIOINFORMATICS/BTH436},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PrzuljCJ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PrzuljWJ04,
author = {Natasa Przulj and
Dennis A. Wigle and
Igor Jurisica},
title = {Functional topology in a network of protein interactions},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {340--348},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg415},
doi = {10.1093/BIOINFORMATICS/BTG415},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PrzuljWJ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/QiG04,
author = {Yuan Qi and
Nick V. Grishin},
title = {{PCOAT:} positional correlation analysis using multiple methods},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3697--3699},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth431},
doi = {10.1093/BIOINFORMATICS/BTH431},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/QiG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/QianG04,
author = {Bin Qian and
Richard A. Goldstein},
title = {Performance of an iterated {T-HMM} for homology detection},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2175--2180},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth181},
doi = {10.1093/BIOINFORMATICS/BTH181},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/QianG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/QuX04,
author = {Yi Qu and
Shizhong Xu},
title = {Supervised cluster analysis for microarray data based on multivariate
Gaussian mixture},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1905--1913},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth177},
doi = {10.1093/BIOINFORMATICS/BTH177},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/QuX04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/QuerecSRP04,
author = {Troy D. Querec and
Radka Stoyanova and
Eric Ross and
Christos Patriotis},
title = {A novel approach for increasing sensitivity and correcting saturation
artifacts of radioactively labeled cDNA arrays},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1955--1961},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth188},
doi = {10.1093/BIOINFORMATICS/BTH188},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/QuerecSRP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RahmannG04,
author = {Sven Rahmann and
Christine Gr{\"{a}}fe},
title = {Mean and variance of the Gibbs free energy of oligonucleotides in
the nearest neighbor model under varying conditions},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {2928--2933},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth334},
doi = {10.1093/BIOINFORMATICS/BTH334},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/RahmannG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RaineyG04,
author = {Jan K. Rainey and
M. Cynthia Goh},
title = {An interactive triple-helical collagen builder},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2458--2459},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth247},
doi = {10.1093/BIOINFORMATICS/BTH247},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/RaineyG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RangelAGLSGWF04,
author = {Claudia Rangel and
John Angus and
Zoubin Ghahramani and
Maria Lioumi and
Elizabeth Sotheran and
Alessia Gaiba and
David L. Wild and
Francesco Falciani},
title = {Modeling T-cell activation using gene expression profiling and state-space
models},
journal = {Bioinform.},
volume = {20},
number = {9},
pages = {1361--1372},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth093},
doi = {10.1093/BIOINFORMATICS/BTH093},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/RangelAGLSGWF04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ReichOATM04,
author = {Michael Reich and
K. Ohm and
Michael Angelo and
Pablo Tamayo and
Jill P. Mesirov},
title = {GeneCluster 2.0: an advanced toolset for bioarray analysis},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1797--1798},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth138},
doi = {10.1093/BIOINFORMATICS/BTH138},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ReichOATM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ReymondCDCBF04,
author = {Nancie Reymond and
Hubert Charles and
Laurent Duret and
Federica Calevro and
Guillaume Beslon and
Jean{-}Michel Fayard},
title = {{ROSO:} optimizing oligonucleotide probes for microarrays},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {271--273},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg401},
doi = {10.1093/BIOINFORMATICS/BTG401},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ReymondCDCBF04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RingnerVASH04,
author = {Markus Ringn{\'{e}}r and
Srinivas Veerla and
Samuel Andersson and
Johan Staaf and
Jari H{\"{a}}kkinen},
title = {{ACID:} a database for microarray clone information},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2305--2306},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth089},
doi = {10.1093/BIOINFORMATICS/BTH089},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RingnerVASH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RobertsHHMY04,
author = {Michael Roberts and
Wayne B. Hayes and
Brian R. Hunt and
Stephen M. Mount and
James A. Yorke},
title = {Reducing storage requirements for biological sequence comparison},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3363--3369},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth408},
doi = {10.1093/BIOINFORMATICS/BTH408},
timestamp = {Thu, 12 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RobertsHHMY04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RobinsonWBB04,
author = {Peter N. Robinson and
Andreas Wollstein and
Ulrike B{\"{o}}hme and
Bradley J. Beattie},
title = {Ontologizing gene-expression microarray data: characterizing clusters
with Gene Ontology},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {979--981},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth040},
doi = {10.1093/BIOINFORMATICS/BTH040},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/RobinsonWBB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RoblesO04,
author = {Jaime R. Robles and
Edwin J. C. G. van den Oord},
title = {lga972: a cross-platform application for optimizing {LD} studies using
a genetic algorithm},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3244--3245},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth348},
doi = {10.1093/BIOINFORMATICS/BTH348},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RoblesO04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RodiMM04,
author = {Diane J. Rodi and
Suneeta Mandava and
Lee Makowski},
title = {{DIVAA:} analysis of amino acid diversity in multiple aligned protein
sequences},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3481--3489},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth432},
doi = {10.1093/BIOINFORMATICS/BTH432},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RodiMM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RognvaldssonY04,
author = {Thorsteinn S. R{\"{o}}gnvaldsson and
Liwen You},
title = {Why neural networks should not be used for {HIV-1} protease cleavage
site prediction},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1702--1709},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth144},
doi = {10.1093/BIOINFORMATICS/BTH144},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RognvaldssonY04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RomeroK04,
author = {Pedro Romero and
Peter D. Karp},
title = {Using functional and organizational information to improve genome-wide
computational prediction of transcription units on pathway-genome
databases},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {709--717},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg471},
doi = {10.1093/BIOINFORMATICS/BTG471},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RomeroK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RosenfeldSPFD04,
author = {Jeffrey A. Rosenfeld and
Indra Neil Sarkar and
Paul J. Planet and
David H. Figurski and
Robert DeSalle},
title = {ORFcurator: molecular curation of genes and gene clusters in prokaryotic
organisms},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3462--3465},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth427},
doi = {10.1093/BIOINFORMATICS/BTH427},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/RosenfeldSPFD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/RuanSZ04,
author = {Jianhua Ruan and
Gary D. Stormo and
Weixiong Zhang},
title = {An Iterated loop matching approach to the prediction of {RNA} secondary
structures with pseudoknots},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {58--66},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg373},
doi = {10.1093/BIOINFORMATICS/BTG373},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/RuanSZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SadreyevG04,
author = {Ruslan Sadreyev and
Nick V. Grishin},
title = {Quality of alignment comparison by {COMPASS} improves with inclusion
of diverse confident homologs},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {818--828},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg485},
doi = {10.1093/BIOINFORMATICS/BTG485},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SadreyevG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Saetrom04,
author = {P{\aa}l S{\ae}trom},
title = {Predicting the efficacy of short oligonucleotides in antisense and
RNAi experiments with boosted genetic programming},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3055--3063},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth364},
doi = {10.1093/BIOINFORMATICS/BTH364},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Saetrom04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SaigoVUA04,
author = {Hiroto Saigo and
Jean{-}Philippe Vert and
Nobuhisa Ueda and
Tatsuya Akutsu},
title = {Protein homology detection using string alignment kernels},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1682--1689},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth141},
doi = {10.1093/BIOINFORMATICS/BTH141},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SaigoVUA04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SakharkarC04,
author = {Kishore R. Sakharkar and
Vincent T. K. Chow},
title = {Exploring genome architecture through {GOV:} a WWW-based gene order
visualizer},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {984--985},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth046},
doi = {10.1093/BIOINFORMATICS/BTH046},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SakharkarC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Saldanha04,
author = {Alok J. Saldanha},
title = {Java Treeview - extensible visualization of microarray data},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3246--3248},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth349},
doi = {10.1093/BIOINFORMATICS/BTH349},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Saldanha04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SamuelssonDLR04,
author = {Jim Samuelsson and
Daniel Dalevi and
Fredrik Levander and
Thorsteinn S. R{\"{o}}gnvaldsson},
title = {Modular, scriptable and automated analysis tools for high-throughput
peptide mass fingerprinting},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3628--3635},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth460},
doi = {10.1093/BIOINFORMATICS/BTH460},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SamuelssonDLR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SattenDMWCCDPB04,
author = {Glen A. Satten and
Somnath Datta and
Hercules Moura and
Adrian R. Woolfitt and
Maria da G. Carvalho and
George M. Carlone and
Barun K. De and
Antonis Pavlopoulos and
John R. Barr},
title = {Standardization and denoising algorithms for mass spectra to classify
whole-organism bacterial specimens},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3128--3136},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth372},
doi = {10.1093/BIOINFORMATICS/BTH372},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SattenDMWCCDPB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SaundersCC04,
author = {Neil F. W. Saunders and
Paul M. G. Curmi and
Ricardo Cavicchioli},
title = {An online database for the detection of novel archaeal sequences in
human ESTs},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2361--2362},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth249},
doi = {10.1093/BIOINFORMATICS/BTH249},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SaundersCC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SavvaCD04,
author = {George Savva and
Jenn Conn and
Jo L. Dicks},
title = {Drawing phylogenetic trees in {LATEX} and Microsoft Word},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2322--2323},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth228},
doi = {10.1093/BIOINFORMATICS/BTH228},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SavvaCD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SchillingWD04,
author = {Lisa M. Schilling and
Jonathan D. Wren and
Robert P. Dellavalle},
title = {Letter to the Editor},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {2903},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth385},
doi = {10.1093/BIOINFORMATICS/BTH385},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SchillingWD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ScholzGSFS04,
author = {Matthias Scholz and
S. Gatzek and
Alisdair R. Sterling and
Oliver Fiehn and
Joachim Selbig},
title = {Metabolite fingerprinting: detecting biological features by independent
component analysis},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2447--2454},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth270},
doi = {10.1093/BIOINFORMATICS/BTH270},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ScholzGSFS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SchuemieWSMEJMK04,
author = {Martijn J. Schuemie and
Marc Weeber and
Bob J. A. Schijvenaars and
Erik M. van Mulligen and
C. Christiaan van der Eijk and
Rob Jelier and
Barend Mons and
Jan A. Kors},
title = {Distribution of information in biomedical abstracts and full-text
publications},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2597--2604},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth291},
doi = {10.1093/BIOINFORMATICS/BTH291},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SchuemieWSMEJMK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ScottLHT04,
author = {Michelle S. Scott and
Guoqing Lu and
Michael T. Hallett and
David Y. Thomas},
title = {The Hera database and its use in the characterization of endoplasmic
reticulum proteins},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {937--944},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth010},
doi = {10.1093/BIOINFORMATICS/BTH010},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ScottLHT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SelivanovPSCRLC04,
author = {Vitaly A. Selivanov and
Joaquim Puigjaner and
Antonio Sillero and
Josep J. Centelles and
Antonio Ramos{-}Montoya and
Paul W.{-}N. Lee and
Marta Cascante},
title = {An optimized algorithm for flux estimation from isotopomer distribution
in glucose metabolites},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3387--3397},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth412},
doi = {10.1093/BIOINFORMATICS/BTH412},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SelivanovPSCRLC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SempleDHPS04,
author = {Charles Semple and
Philip Daniel and
Wim Hordijk and
Roderic D. M. Page and
Mike A. Steel},
title = {Supertree algorithms for ancestral divergence dates and nested taxa},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2355--2360},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth246},
doi = {10.1093/BIOINFORMATICS/BTH246},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SempleDHPS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SeoBCHSH04,
author = {Jinwook Seo and
Marina Bakay and
Yi{-}Wen Chen and
Sara Hilmer and
Ben Shneiderman and
Eric P. Hoffman},
title = {Interactively optimizing signal-to-noise ratios in expression profiling:
project-specific algorithm selection and detection p-value weighting
in Affymetrix microarrays},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2534--2544},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth280},
doi = {10.1093/BIOINFORMATICS/BTH280},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SeoBCHSH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SeseKMKM04,
author = {Jun Sese and
Yukinori Kurokawa and
Morito Monden and
Kikuya Kato and
Shinichi Morishita},
title = {Constrained clusters of gene expression profiles with pathological
features},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3137--3145},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth373},
doi = {10.1093/BIOINFORMATICS/BTH373},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SeseKMKM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShafrirG04,
author = {Yinon Shafrir and
H. Robert Guy},
title = {{STAM:} simple Transmembrane Alignment Method},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {758--769},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg482},
doi = {10.1093/BIOINFORMATICS/BTG482},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ShafrirG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShahCPBBBRHD04,
author = {Nameeta Y. Shah and
Olivier Couronne and
Len A. Pennacchio and
Michael Brudno and
Serafim Batzoglou and
E. Wes Bethel and
Edward M. Rubin and
Bernd Hamann and
Inna Dubchak},
title = {Phylo-VISTA: interactive visualization of multiple {DNA} sequence
alignments},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {636--643},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg459},
doi = {10.1093/BIOINFORMATICS/BTG459},
timestamp = {Thu, 16 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ShahCPBBBRHD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShahF04,
author = {N. H. Shah and
Nina V. Fedoroff},
title = {{CLENCH:} a program for calculating Cluster ENriCHment using the Gene
Ontology},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1196--1197},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth056},
doi = {10.1093/BIOINFORMATICS/BTH056},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ShahF04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShanahanT04,
author = {Hugh P. Shanahan and
Janet M. Thornton},
title = {An examination of the conservation of surface patch polarity for proteins},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2197--2204},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth218},
doi = {10.1093/BIOINFORMATICS/BTH218},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ShanahanT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShapiroHFD04,
author = {Bruce E. Shapiro and
Michael Hucka and
Andrew Finney and
John Doyle},
title = {MathSBML: a package for manipulating SBML-based biological models},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2829--2831},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth271},
doi = {10.1093/BIOINFORMATICS/BTH271},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ShapiroHFD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SharmaIRR04,
author = {Deepak Sharma and
Biju Issac and
G. P. S. Raghava and
Ramakrishna Ramaswamy},
title = {Spectral Repeat Finder {(SRF):} identification of repetitive sequences
using Fourier transformation},
journal = {Bioinform.},
volume = {20},
number = {9},
pages = {1405--1412},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth103},
doi = {10.1093/BIOINFORMATICS/BTH103},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SharmaIRR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SharmaMPDB04,
author = {Ramakant Sharma and
Jitendra Kumar Maheshwari and
Tulika Prakash and
Debasis Dash and
Samir K. Brahmachari},
title = {Recognition and analysis of protein-coding genes in severe acute respiratory
syndrome associated coronavirus},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1074--1080},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth041},
doi = {10.1093/BIOINFORMATICS/BTH041},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SharmaMPDB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShawHSW04,
author = {O. J. Shaw and
Colin Harwood and
L. Jason Steggles and
Anil Wipat},
title = {{SARGE:} a tool for creation of putative genetic networks},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3638--3640},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth395},
doi = {10.1093/BIOINFORMATICS/BTH395},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ShawHSW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShibuyaKK04,
author = {Tetsuo Shibuya and
Hisashi Kashima and
Akihiko Konagaya},
title = {Efficient filtering methods for clustering cDNAs with spliced sequence
alignment},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {29--39},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg367},
doi = {10.1093/BIOINFORMATICS/BTG367},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ShibuyaKK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShihMDYQG04,
author = {Joanna H. Shih and
Aleksandra M. Michalowska and
Kevin Dobbin and
Yumei Ye and
Ting Hu Qiu and
Jeffrey E. Green},
title = {Effects of pooling mRNA in microarray class comparisons},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3318--3325},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth391},
doi = {10.1093/BIOINFORMATICS/BTH391},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ShihMDYQG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShmuelyDDEFS04,
author = {Hagay Shmuely and
E. Dinitz and
Irit Dahan and
Jerry Eichler and
D. Fischer and
Boaz Shaanan},
title = {Poorly conserved ORFs in the genome of the archaea Halobacterium sp.
{NRC-1} correspond to expressed proteins},
journal = {Bioinform.},
volume = {20},
number = {8},
pages = {1248--1253},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth075},
doi = {10.1093/BIOINFORMATICS/BTH075},
timestamp = {Tue, 09 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ShmuelyDDEFS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShoopCOLPDTC04,
author = {Elizabeth Shoop and
Paulo Casaes and
Getiria Onsongo and
Lisa Lesnett and
Erla Osk Petursdottir and
Edward Kofi Yeboah Donkor and
Dennis Tkach and
Michael Cosimini},
title = {Data exploration tools for the Gene Ontology database},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3442--3454},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth425},
doi = {10.1093/BIOINFORMATICS/BTH425},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ShoopCOLPDTC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SiegmundLL04,
author = {Kimberly D. Siegmund and
Peter W. Laird and
Ite A. Laird{-}Offringa},
title = {A comparison of cluster analysis methods using {DNA} methylation data},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1896--1904},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth176},
doi = {10.1093/BIOINFORMATICS/BTH176},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SiegmundLL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SiewKTKSKCABJ04,
author = {Joyce Phui Yee Siew and
Asif M. Khan and
Paul T. J. Tan and
Judice L. Y. Koh and
Seng Hong Seah and
Chuay Yeng Koo and
Siaw Ching Chai and
Arunmozhiarasi Armugam and
Vladimir Brusic and
Kandiah Jeyaseelan},
title = {Systematic analysis of snake neurotoxins' functional classification
using a data warehousing approach},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3466--3480},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth430},
doi = {10.1093/BIOINFORMATICS/BTH430},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SiewKTKSKCABJ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SimonisWCH04,
author = {N. Simonis and
Shoshana J. Wodak and
G. N. Cohen and
Jacques van Helden},
title = {Combining pattern discovery and discriminant analysis to predict gene
co-regulation},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2370--2379},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth252},
doi = {10.1093/BIOINFORMATICS/BTH252},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SimonisWCH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Sjolander04,
author = {Kimmen Sj{\"{o}}lander},
title = {Phylogenomic inference of protein molecular function: advances and
challenges},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {170--179},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth021},
doi = {10.1093/BIOINFORMATICS/BTH021},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Sjolander04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SmidD04,
author = {Marcel Smid and
Lambert C. J. Dorssers},
title = {GO-Mapper: functional analysis of gene expression data using the expression
level as a score to evaluate Gene Ontology terms},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2618--2625},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth293},
doi = {10.1093/BIOINFORMATICS/BTH293},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SmidD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SmithRW04,
author = {Lawrence H. Smith and
Thomas C. Rindflesch and
W. John Wilbur},
title = {MedPost: a part-of-speech tagger for bioMedical text},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2320--2321},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth227},
doi = {10.1093/BIOINFORMATICS/BTH227},
timestamp = {Mon, 26 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SmithRW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SmootGP04,
author = {Michael E. Smoot and
Stephanie A. Guerlain and
William R. Pearson},
title = {Visualization of near-optimal sequence alignments},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {953--958},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth013},
doi = {10.1093/BIOINFORMATICS/BTH013},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SmootGP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SohlerHZ04,
author = {Florian Sohler and
Daniel Hanisch and
Ralf Zimmer},
title = {New methods for joint analysis of biological networks and expression
data},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1517--1521},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth112},
doi = {10.1093/BIOINFORMATICS/BTH112},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SohlerHZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SommerRDLL04,
author = {Ingolf Sommer and
J{\"{o}}rg Rahnenf{\"{u}}hrer and
Francisco S. Domingues and
Ulrik de Lichtenberg and
Thomas Lengauer},
title = {Predicting protein structure classes from function predictions},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {770--776},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg483},
doi = {10.1093/BIOINFORMATICS/BTG483},
timestamp = {Mon, 25 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SommerRDLL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SontagKK04,
author = {Eduardo D. Sontag and
Anatoly Kiyatkin and
Boris N. Kholodenko},
title = {Inferring dynamic architecture of cellular networks using time series
of gene expression, protein and metabolite data},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1877--1886},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth173},
doi = {10.1093/BIOINFORMATICS/BTH173},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SontagKK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SpencerC04,
author = {Chris C. A. Spencer and
Graham Coop},
title = {SelSim: a program to simulate population genetic data with natural
selection and recombination},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3673--3675},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth417},
doi = {10.1093/BIOINFORMATICS/BTH417},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SpencerC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SpitzerFCL04,
author = {Michael Spitzer and
Georg Fuellen and
Paul Cullen and
Stefan Lorkowski},
title = {VisCoSe: visualization and comparison of consensus sequences},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {433--435},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg444},
doi = {10.1093/BIOINFORMATICS/BTG444},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SpitzerFCL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SpyropoulosLBH04,
author = {Ioannis C. Spyropoulos and
Theodore Liakopoulos and
Pantelis G. Bagos and
Stavros J. Hamodrakas},
title = {TMRPres2D: high quality visual representation of transmembrane protein
models},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3258--3260},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth358},
doi = {10.1093/BIOINFORMATICS/BTH358},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SpyropoulosLBH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SreekumarHPG04,
author = {Kodangattil R. Sreekumar and
You{-}Ping Huang and
Mark H. Pausch and
Kamalakar Gulukota},
title = {Predicting GPCR-G-protein coupling using hidden Markov models},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3490--3499},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth434},
doi = {10.1093/BIOINFORMATICS/BTH434},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SreekumarHPG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SteinhauserJLSK04,
author = {Dirk Steinhauser and
Bj{\"{o}}rn H. Junker and
Alexander L{\"{u}}demann and
Joachim Selbig and
Joachim Kopka},
title = {Hypothesis-driven approach to predict transcriptional units from gene
expression data},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1928--1939},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth182},
doi = {10.1093/BIOINFORMATICS/BTH182},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SteinhauserJLSK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SteinhauserULTK04,
author = {Dirk Steinhauser and
Bj{\"{o}}rn Usadel and
Alexander L{\"{u}}demann and
Oliver Thimm and
Joachim Kopka},
title = {{CSB.DB:} a comprehensive systems-biology database},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3647--3651},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth398},
doi = {10.1093/BIOINFORMATICS/BTH398},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SteinhauserULTK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/StockerRT04,
author = {Gernot Stocker and
Dietmar Rieder and
Zlatko Trajanoski},
title = {ClusterControl: a web interface for distributing and monitoring bioinformatics
applications on a Linux cluster},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {805--807},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth014},
doi = {10.1093/BIOINFORMATICS/BTH014},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/StockerRT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/StojanovicD04,
author = {Nikola Stojanovic and
Ken Dewar},
title = {Identifying multiple alignment regions satisfying simple formulas
and patterns},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {2140--2142},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth196},
doi = {10.1093/BIOINFORMATICS/BTH196},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/StojanovicD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/StoyanovaQBP04,
author = {Radka Stoyanova and
Troy D. Querec and
Truman R. Brown and
Christos Patriotis},
title = {Normalization of single-channel {DNA} array data by principal component
analysis},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1772--1784},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth170},
doi = {10.1093/BIOINFORMATICS/BTH170},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/StoyanovaQBP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SunD04,
author = {Hao Sun and
Ramana V. Davuluri},
title = {Java-based application framework for visualization of gene regulatory
region annotations},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {727--734},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg476},
doi = {10.1093/BIOINFORMATICS/BTG476},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SunD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SupekV04,
author = {Fran Supek and
Kristian Vlahovicek},
title = {{INCA:} synonymous codon usage analysis and clustering by means of
self-organizing map},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2329--2330},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth238},
doi = {10.1093/BIOINFORMATICS/BTH238},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SupekV04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SuskoR04,
author = {Edward Susko and
Andrew J. Roger},
title = {Estimating and comparing the rates of gene discovery and expressed
sequence tag {(EST)} frequencies in {EST} surveys},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2279--2287},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth239},
doi = {10.1093/BIOINFORMATICS/BTH239},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SuskoR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SuyamaTB04,
author = {Mikita Suyama and
David Torrents and
Peer Bork},
title = {{BLAST2GENE:} a comprehensive conversion of {BLAST} output into independent
genes and gene fragments},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1968--1970},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth172},
doi = {10.1093/BIOINFORMATICS/BTH172},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SuyamaTB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SwatKH04,
author = {Maciej Swat and
Alexander E. Kel and
Hanspeter Herzel},
title = {Bifurcation analysis of the regulatory modules of the mammalian {G1/S}
transition},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1506--1511},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth110},
doi = {10.1093/BIOINFORMATICS/BTH110},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SwatKH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SwertzBHJBBKKJ04,
author = {Morris A. Swertz and
Engbert O. de Brock and
Sacha A. F. T. van Hijum and
Anne de Jong and
Girbe Buist and
Richard J. S. Baerends and
Jan Kok and
Oscar P. Kuipers and
Ritsert C. Jansen},
title = {Molecular Genetics Information System {(MOLGENIS):} alternatives in
developing local experimental genomics databases},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {2075--2083},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth206},
doi = {10.1093/BIOINFORMATICS/BTH206},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SwertzBHJBBKKJ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TadesseVL04,
author = {Mahlet G. Tadesse and
Marina Vannucci and
Pietro Li{\`{o}}},
title = {Identification of {DNA} regulatory motifs using Bayesian variable
selection},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2553--2561},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth282},
doi = {10.1093/BIOINFORMATICS/BTH282},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TadesseVL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TakahashiKHT04,
author = {Kouichi Takahashi and
Kazunari Kaizu and
Bin Hu and
Masaru Tomita},
title = {A multi-algorithm, multi-timescale method for cell simulation},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {538--546},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg442},
doi = {10.1093/BIOINFORMATICS/BTG442},
timestamp = {Wed, 19 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/TakahashiKHT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TammiAKA04,
author = {Martti T. Tammi and
Erik Arner and
Ellen Kindlund and
Bj{\"{o}}rn Andersson},
title = {ReDiT: Repeat Discrepancy Tagger-a shotgun assembly finishing aid},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {803--804},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth004},
doi = {10.1093/BIOINFORMATICS/BTH004},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TammiAKA04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Taneda04,
author = {Akito Taneda},
title = {Adplot: detection and visualization of repetitive patterns in complete
genomes},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {701--708},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg470},
doi = {10.1093/BIOINFORMATICS/BTG470},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Taneda04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TangZR04,
author = {Chun Tang and
Aidong Zhang and
Murali Ramanathan},
title = {{ESPD:} a pattern detection model underlying gene expression profiles},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {829--838},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg486},
doi = {10.1093/BIOINFORMATICS/BTG486},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TangZR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TeraiT04,
author = {Goro Terai and
Toshihisa Takagi},
title = {Predicting rules on organization of cis-regulatory elements, taking
the order of elements into account},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1119--1128},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth049},
doi = {10.1093/BIOINFORMATICS/BTH049},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TeraiT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TessierBLP04,
author = {Dominique Tessier and
Benjamin Bardiaux and
Colette Larr{\'{e}} and
Yves Popineau},
title = {Data mining techniques to study the disulfide-bonding state in proteins:
signal peptide is a strong descriptor},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2509--2512},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth332},
doi = {10.1093/BIOINFORMATICS/BTH332},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TessierBLP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Thollesson04,
author = {Mikael Thollesson},
title = {LDDist: a Perl module for calculating LogDet pair-wise distances for
protein and nucleotide sequences},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {416--418},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg422},
doi = {10.1093/BIOINFORMATICS/BTG422},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Thollesson04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ThomasMPH04,
author = {Reuben Thomas and
Sanjay Mehrotra and
Eleftherios T. Papoutsakis and
Vassily Hatzimanikatis},
title = {A model-based optimization framework for the inference on gene regulatory
networks from {DNA} array data},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3221--3235},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth389},
doi = {10.1093/BIOINFORMATICS/BTH389},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ThomasMPH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TibshiraniHNSSKL04,
author = {Robert Tibshirani and
Trevor Hastie and
Balasubramanian Narasimhan and
Scott G. Soltys and
Gongyi Shi and
Albert C. Koong and
Quynh{-}Thu Le},
title = {Sample classification from protein mass spectrometry, by 'peak probability
contrasts'},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3034--3044},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth357},
doi = {10.1093/BIOINFORMATICS/BTH357},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/TibshiraniHNSSKL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TomiiA04,
author = {Kentaro Tomii and
Yutaka Akiyama},
title = {{FORTE:} a profile-profile comparison tool for protein fold recognition},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {594--595},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg474},
doi = {10.1093/BIOINFORMATICS/BTG474},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/TomiiA04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ToyodaW04,
author = {Tetsuro Toyoda and
Akiyoshi Wada},
title = {Omic space: coordinate-based integration and analysis of genomic phenomic
interactions},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1759--1765},
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url = {https://doi.org/10.1093/bioinformatics/bth165},
doi = {10.1093/BIOINFORMATICS/BTH165},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ToyodaW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TressGV04,
author = {Michael L. Tress and
Osvaldo Gra{\~{n}}a and
Alfonso Valencia},
title = {SQUARE-determining reliable regions in sequence alignments},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {974--975},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth032},
doi = {10.1093/BIOINFORMATICS/BTH032},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
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bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TsaiHYL04,
author = {Yin{-}Te Tsai and
Yen Pin Huang and
Ching Ta Yu and
Chin Lung Lu},
title = {MuSiC: a tool for multiple sequence alignment with constraints},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2309--2311},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth220},
doi = {10.1093/BIOINFORMATICS/BTH220},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TsaiHYL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TuTD04,
author = {Qiang Tu and
Haixu Tang and
Dafu Ding},
title = {MedBlast: searching articles related to a biological sequence},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {75--77},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg375},
doi = {10.1093/BIOINFORMATICS/BTG375},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TuTD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TusnadyDS04,
author = {G{\'{a}}bor E. Tusn{\'{a}}dy and
Zsuzsanna Doszt{\'{a}}nyi and
Istv{\'{a}}n Simon},
title = {Transmembrane proteins in the Protein Data Bank: identification and
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journal = {Bioinform.},
volume = {20},
number = {17},
pages = {2964--2972},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth340},
doi = {10.1093/BIOINFORMATICS/BTH340},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/TusnadyDS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/VaquerizasDD04,
author = {Juan M. Vaquerizas and
Joaqu{\'{\i}}n Dopazo and
Ram{\'{o}}n D{\'{\i}}az{-}Uriarte},
title = {{DNMAD:} web-based diagnosis and normalization for microarray data},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3656--3658},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth401},
doi = {10.1093/BIOINFORMATICS/BTH401},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/VaquerizasDD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/VassASRWT04,
author = {Marc Vass and
Nicholas A. Allen and
Clifford A. Shaffer and
Naren Ramakrishnan and
Layne T. Watson and
John J. Tyson},
title = {The JigCell Model Builder and Run Manager},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3680--3681},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth422},
doi = {10.1093/BIOINFORMATICS/BTH422},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/VassASRWT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/VasudevaB04,
author = {Karan Vasudeva and
Upinder S. Bhalla},
title = {Adaptive stochastic-deterministic chemical kinetic simulations},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {78--84},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg376},
doi = {10.1093/BIOINFORMATICS/BTG376},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/VasudevaB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/VilimCLKS04,
author = {R. B. Vilim and
R. M. Cunningham and
B. Lu and
P. Kheradpour and
Fred J. Stevens},
title = {Fold-specific substitution matrices for protein classification},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {847--853},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg492},
doi = {10.1093/BIOINFORMATICS/BTG492},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/VilimCLKS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/VingaGA04,
author = {Susana Vinga and
Rodrigo Gouveia{-}Oliveira and
Jonas S. Almeida},
title = {Comparative evaluation of word composition distances for the recognition
of {SCOP} relationships},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {206--215},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg392},
doi = {10.1093/BIOINFORMATICS/BTG392},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/VingaGA04.bib},
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}
@article{DBLP:journals/bioinformatics/VoigtMIS04,
author = {Claudia Voigt and
Steffen M{\"{o}}ller and
Saleh M. Ibrahim and
Pablo Serrano{-}Fern{\'{a}}ndez},
title = {Non-linear conversion between genetic and physical chromosomal distances},
journal = {Bioinform.},
volume = {20},
number = {12},
pages = {1966--1967},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth168},
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biburl = {https://dblp.org/rec/journals/bioinformatics/VoigtMIS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/VoitA04,
author = {Eberhard O. Voit and
Jonas S. Almeida},
title = {Decoupling dynamical systems for pathway identification from metabolic
profiles},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1670--1681},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth140},
doi = {10.1093/BIOINFORMATICS/BTH140},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/VoitA04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/VossMG04,
author = {Bj{\"{o}}rn Voss and
Carsten Meyer and
Robert Giegerich},
title = {Evaluating the predictability of conformational switching in {RNA}},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1573--1582},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth129},
doi = {10.1093/BIOINFORMATICS/BTH129},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/VossMG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/VulloF04,
author = {Alessandro Vullo and
Paolo Frasconi},
title = {Disulfide connectivity prediction using recursive neural networks
and evolutionary information},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {653--659},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg463},
doi = {10.1093/BIOINFORMATICS/BTG463},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/VulloF04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WakoKE04,
author = {Hiroshi Wako and
Masaki Kato and
Shigeru Endo},
title = {ProMode: a database of normal mode analyses on protein molecules with
a full-atom model},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {2035--2043},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth197},
doi = {10.1093/BIOINFORMATICS/BTH197},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WakoKE04.bib},
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}
@article{DBLP:journals/bioinformatics/WalleLW04,
author = {Ivo Van Walle and
Ignace Lasters and
Lode Wyns},
title = {Align-m-a new algorithm for multiple alignment of highly divergent
sequences},
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volume = {20},
number = {9},
pages = {1428--1435},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth116},
doi = {10.1093/BIOINFORMATICS/BTH116},
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biburl = {https://dblp.org/rec/journals/bioinformatics/WalleLW04.bib},
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}
@article{DBLP:journals/bioinformatics/WangCHKA04,
author = {Jing Wang and
Kevin R. Coombes and
W. Edward Highsmith and
Michael J. Keating and
Lynne V. Abruzzo},
title = {Differences in gene expression between B-cell chronic lymphocytic
leukemia and normal {B} cells: a meta-analysis of three microarray
studies},
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volume = {20},
number = {17},
pages = {3166--3178},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth381},
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timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WangCHKA04.bib},
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}
@article{DBLP:journals/bioinformatics/WangCMGT04,
author = {Juhui Wang and
Christophe Caron and
Michel{-}Yves Mistou and
Christophe Gitton and
Alain Trubuil},
title = {{PARIS:} a proteomic analysis and resources indexation system},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {133--135},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg389},
doi = {10.1093/BIOINFORMATICS/BTG389},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WangCMGT04.bib},
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}
@article{DBLP:journals/bioinformatics/WangE04,
author = {Song Wang and
Stewart Ethier},
title = {A generalized likelihood ratio test to identify differentially expressed
genes from microarray data},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {100--104},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg384},
doi = {10.1093/BIOINFORMATICS/BTG384},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WangE04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangL04,
author = {Yong Wang and
Frederick C. C. Leung},
title = {An evaluation of new criteria for CpG islands in the human genome
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journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1170--1177},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth059},
doi = {10.1093/BIOINFORMATICS/BTH059},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/WangL04.bib},
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}
@article{DBLP:journals/bioinformatics/WangL04a,
author = {Yong Wang and
Frederick C. C. Leung},
title = {{DNA} structure constraint is probably a fundamental factor inducing
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journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3336--3345},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth393},
doi = {10.1093/BIOINFORMATICS/BTH393},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
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}
@article{DBLP:journals/bioinformatics/WangLLCWMd04,
author = {Ji{-}Ping Z. Wang and
Bruce G. Lindsay and
James H. Leebens{-}Mack and
Liying Cui and
P. Kerr Wall and
Webb Colby Miller and
Claude W. dePamphilis},
title = {{EST} clustering error evaluation and correction},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {2973--2984},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth342},
doi = {10.1093/BIOINFORMATICS/BTH342},
timestamp = {Wed, 14 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/WangLLCWMd04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangLS04,
author = {Jiren Wang and
Kuo{-}Bin Li and
Wing{-}Kin Sung},
title = {{G-PRIMER:} greedy algorithm for selecting minimal primer set},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2473--2475},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth259},
doi = {10.1093/BIOINFORMATICS/BTH259},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WangLS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangM04,
author = {Luquan Wang and
Forest Y. Mu},
title = {A Web-based design center for vector-based siRNA and siRNA cassette},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1818--1820},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth164},
doi = {10.1093/BIOINFORMATICS/BTH164},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/WangM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WardMBBJ04,
author = {Jonathan J. Ward and
Liam J. McGuffin and
Kevin Bryson and
Bernard F. Buxton and
David T. Jones},
title = {The {DISOPRED} server for the prediction of protein disorder},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {2138--2139},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth195},
doi = {10.1093/BIOINFORMATICS/BTH195},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WardMBBJ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WenF04,
author = {Liting Wen and
Jin{-}An Feng},
title = {Repair-FunMap: a functional database of proteins of the {DNA} repair
systems},
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volume = {20},
number = {13},
pages = {2135--2137},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth194},
doi = {10.1093/BIOINFORMATICS/BTH194},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WenF04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WendlY04,
author = {Michael C. Wendl and
Shiaw{-}Pyng Yang},
title = {Gap statistics for whole genome shotgun {DNA} sequencing projects},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1527--1534},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth120},
doi = {10.1093/BIOINFORMATICS/BTH120},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WendlY04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WeskampKHK04,
author = {Nils Weskamp and
Daniel Kuhn and
Eyke H{\"{u}}llermeier and
Gerhard Klebe},
title = {Efficient similarity search in protein structure databases by k-clique
hashing},
journal = {Bioinform.},
volume = {20},
number = {10},
pages = {1522--1526},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth113},
doi = {10.1093/BIOINFORMATICS/BTH113},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/WeskampKHK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WettenhallS04,
author = {James M. Wettenhall and
Gordon K. Smyth},
title = {limmaGUI: {A} graphical user interface for linear modeling of microarray
data},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3705--3706},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth449},
doi = {10.1093/BIOINFORMATICS/BTH449},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WettenhallS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WichertFS04,
author = {Sofia Wichert and
Konstantinos Fokianos and
Korbinian Strimmer},
title = {Identifying periodically expressed transcripts in microarray time
series data},
journal = {Bioinform.},
volume = {20},
number = {1},
pages = {5--20},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg364},
doi = {10.1093/BIOINFORMATICS/BTG364},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WichertFS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WiederkehrBMKSHMICYLCLP04,
author = {Christa Niederhauser{-}Wiederkehr and
R. Basavaraj and
Cyril Sarrauste de Menthi{\`{e}}re and
R. Koch and
U. Schlecht and
Leandro Hermida and
Benjamin Masdoua and
Ryohei Ishii and
V. Cassen and
M. Yamamoto and
Christopher Lane and
J. Michael Cherry and
N. Lamb and
Michael Primig},
title = {Database model and specification of GermOnline Release 2.0, a cross-species
community annotation knowledgebase on germ cell differentiation},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {808--811},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth030},
doi = {10.1093/BIOINFORMATICS/BTH030},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/WiederkehrBMKSHMICYLCLP04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WilliamsW04,
author = {Alexander G. Williams and
Robert W. Williams},
title = {GenomeMixer: a complex genetic cross simulator},
journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2491--2492},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth269},
doi = {10.1093/BIOINFORMATICS/BTH269},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WilliamsW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WonPK04,
author = {Kyoung{-}Jae Won and
Adam Pr{\"{u}}gel{-}Bennett and
Anders Krogh},
title = {Training {HMM} structure with genetic algorithm for biological sequence
analysis},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3613--3619},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth454},
doi = {10.1093/BIOINFORMATICS/BTH454},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WonPK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WongLLTY04,
author = {Prudence W. H. Wong and
Tak Wah Lam and
N. Lu and
Hing{-}Fung Ting and
Siu{-}Ming Yiu},
title = {An efficient algorithm for optimizing whole genome alignment with
noise},
journal = {Bioinform.},
volume = {20},
number = {16},
pages = {2676--2684},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth308},
doi = {10.1093/BIOINFORMATICS/BTH308},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WongLLTY04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WoodH04,
author = {Matthew J. Wood and
Jonathan D. Hirst},
title = {Predicting protein secondary structure by cascade-correlation neural
networks},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {419--420},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg423},
doi = {10.1093/BIOINFORMATICS/BTG423},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WoodH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Wren04,
author = {Jonathan D. Wren},
title = {404 not found: the stability and persistence of URLs published in
{MEDLINE}},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {668--672},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg465},
doi = {10.1093/BIOINFORMATICS/BTG465},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Wren04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WrenBSSG04,
author = {Jonathan D. Wren and
Raffi Bekeredjian and
Jelena A. Stewart and
Ralph V. Shohet and
Harold R. Garner},
title = {Knowledge discovery by automated identification and ranking of implicit
relationships},
journal = {Bioinform.},
volume = {20},
number = {3},
pages = {389--398},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg421},
doi = {10.1093/BIOINFORMATICS/BTG421},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WrenBSSG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WrenG04,
author = {Jonathan D. Wren and
Harold R. Garner},
title = {Shared relationship analysis: ranking set cohesion and commonalities
within a literature-derived relationship network},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {191--198},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg390},
doi = {10.1093/BIOINFORMATICS/BTG390},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WrenG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WuHJC04,
author = {Chia{-}Chin Wu and
Hsuan{-}Cheng Huang and
Hsueh{-}Fen Juan and
Shui{-}Tein Chen},
title = {GeneNetwork: an interactive tool for reconstruction of genetic networks
using microarray data},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3691--3693},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth428},
doi = {10.1093/BIOINFORMATICS/BTH428},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WuHJC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WuLWS04,
author = {Jain{-}Shing Wu and
Chungnan Lee and
Chien{-}Chang Wu and
Yow{-}Ling Shiue},
title = {Primer design using genetic algorithm},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1710--1717},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth147},
doi = {10.1093/BIOINFORMATICS/BTH147},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WuLWS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WuN04,
author = {Wei Wu and
William Stafford Noble},
title = {Genomic data visualization on the Web},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1804--1805},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth154},
doi = {10.1093/BIOINFORMATICS/BTH154},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WuN04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WymanJB04,
author = {Stacia K. Wyman and
Robert K. Jansen and
Jeffrey L. Boore},
title = {Automatic annotation of organellar genomes with {DOGMA}},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {3252--3255},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth352},
doi = {10.1093/BIOINFORMATICS/BTH352},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/WymanJB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XiongZX04,
author = {Momiao Xiong and
Jinying Zhao and
Hao Xiong},
title = {Network-based regulatory pathways analysis},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {2056--2066},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth201},
doi = {10.1093/BIOINFORMATICS/BTH201},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/XiongZX04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XirasagarGMTSCYYSXW04,
author = {Sandhya Xirasagar and
Scott F. Gustafson and
B. Alex Merrick and
Kenneth B. Tomer and
Stanley Stasiewicz and
Denny D. Chan and
Kenneth J. Yost III and
John R. Yates III and
Susan Sumner and
Nianqing Xiao and
Michael D. Waters},
title = {{CEBS} object model for systems biology data, SysBio-OM},
journal = {Bioinform.},
volume = {20},
number = {13},
pages = {2004--2015},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth189},
doi = {10.1093/BIOINFORMATICS/BTH189},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/XirasagarGMTSCYYSXW04.bib},
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}
@article{DBLP:journals/bioinformatics/XuM04,
author = {Weijia Xu and
Daniel P. Miranker},
title = {A metric model of amino acid substitution},
journal = {Bioinform.},
volume = {20},
number = {8},
pages = {1214--1221},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth065},
doi = {10.1093/BIOINFORMATICS/BTH065},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/XuM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XuM04a,
author = {Weijia Xu and
Daniel P. Miranker},
title = {A metric model of amino acid substitution},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3716},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bti150},
doi = {10.1093/BIOINFORMATICS/BTI150},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/XuM04a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/XueWSZ04,
author = {Wen Xue and
Jin Wang and
Zhirong Shen and
Huaiqiu Zhu},
title = {Enrichment of transcriptional regulatory sites in non-coding genomic
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journal = {Bioinform.},
volume = {20},
number = {4},
pages = {569--575},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg450},
doi = {10.1093/BIOINFORMATICS/BTG450},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/XueWSZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YabukiMSS04,
author = {Yukimitsu Yabuki and
Yuri Mukai and
Mark B. Swindells and
Makiko Suwa},
title = {{GENIUS} {II:} a high-throughput database system for linking ORFs
in complete genomes to known protein three-dimensional structures},
journal = {Bioinform.},
volume = {20},
number = {4},
pages = {596--598},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg478},
doi = {10.1093/BIOINFORMATICS/BTG478},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YabukiMSS04.bib},
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}
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author = {Zheng Rong Yang},
title = {Mining gene expression data based on template theory},
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volume = {20},
number = {16},
pages = {2759--2766},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth323},
doi = {10.1093/BIOINFORMATICS/BTH323},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Yang04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YangC04,
author = {Zheng Rong Yang and
Kuo{-}Chen Chou},
title = {Bio-support vector machines for computational proteomics},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {735--741},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg477},
doi = {10.1093/BIOINFORMATICS/BTG477},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YangC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YangC04a,
author = {Zheng Rong Yang and
Kuo{-}Chen Chou},
title = {Predicting the linkage sites in glycoproteins using bio-basis function
neural network},
journal = {Bioinform.},
volume = {20},
number = {6},
pages = {903--908},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth001},
doi = {10.1093/BIOINFORMATICS/BTH001},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YangC04a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YangDQ04,
author = {Zheng Rong Yang and
Andrew R. Dalby and
Jing Qiu},
title = {Mining {HIV} protease cleavage data using genetic programming with
a sum-product function},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3398--3405},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth414},
doi = {10.1093/BIOINFORMATICS/BTH414},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YangDQ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YeungSLY04,
author = {Lap Kun Yeung and
Lap Keung Szeto and
Alan Wee{-}Chung Liew and
Hong Yan},
title = {Dominant spectral component analysis for transcriptional regulations
using microarray time-series data},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {742--749},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg479},
doi = {10.1093/BIOINFORMATICS/BTG479},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YeungSLY04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YoungCW04,
author = {Nelson Young and
Zhan Chang and
David S. Wishart},
title = {GelScape: a web-based server for interactively annotating, manipulating,
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journal = {Bioinform.},
volume = {20},
number = {6},
pages = {976--978},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth033},
doi = {10.1093/BIOINFORMATICS/BTH033},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YoungCW04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YuSWHJ04,
author = {Jing Yu and
V. Anne Smith and
Paul P. Wang and
Alexander J. Hartemink and
Erich D. Jarvis},
title = {Advances to Bayesian network inference for generating causal networks
from observational biological data},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3594--3603},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth448},
doi = {10.1093/BIOINFORMATICS/BTH448},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YuSWHJ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YuYG04,
author = {Han Yu and
Andrew S. Yoo and
Iva Greenwald},
title = {Cluster Analyzer for Transcription Sites {(CATS):} a C++-based program
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journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1198--1200},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth057},
doi = {10.1093/BIOINFORMATICS/BTH057},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YuYG04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YuanBELZZB04,
author = {Jeffrey Yuan and
Bruce Bush and
Alex Elbrecht and
Yuan Liu and
Theresa Zhang and
Wenqing Zhao and
Richard Blevins},
title = {Enhanced homology searching through genome reading frame predetermination},
journal = {Bioinform.},
volume = {20},
number = {9},
pages = {1416--1427},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth115},
doi = {10.1093/BIOINFORMATICS/BTH115},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/YuanBELZZB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YugiT04,
author = {Katsuyuki Yugi and
Masaru Tomita},
title = {A general computational model of mitochondrial metabolism in a whole
organelle scale},
journal = {Bioinform.},
volume = {20},
number = {11},
pages = {1795--1796},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth125},
doi = {10.1093/BIOINFORMATICS/BTH125},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/YugiT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/YuryevHSKD0PB04,
author = {Anton Yuryev and
Jianping Huang and
Kathryn E. Scott and
Jennifer Kuebler and
Miriam Donaldson and
Michael S. Phillips and
Mark Pohl and
Michael T. Boyce{-}Jacino},
title = {Primer Design and Marker Clustering for Multiplex {SNP-IT} Primer
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journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3526--3532},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth439},
doi = {10.1093/BIOINFORMATICS/BTH439},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/YuryevHSKD0PB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
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@article{DBLP:journals/bioinformatics/ZhangEFDWZWLPHWZ04,
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David A. Eberhard and
Gretchen D. Frantz and
Patrick Dowd and
Thomas D. Wu and
Yan Zhou and
Colin K. Watanabe and
Shiuh{-}Ming Luoh and
Paul Polakis and
Kenneth J. Hillan and
William I. Wood and
Zemin Zhang},
title = {{GEPIS} - quantitative gene expression profiling in normal and cancer
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journal = {Bioinform.},
volume = {20},
number = {15},
pages = {2390--2398},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth256},
doi = {10.1093/BIOINFORMATICS/BTH256},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
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@article{DBLP:journals/bioinformatics/ZhangG04,
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title = {A statistical framework for the design of microarray experiments and
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volume = {20},
number = {16},
pages = {2821--2828},
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doi = {10.1093/BIOINFORMATICS/BTH336},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhangG04.bib},
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}
@article{DBLP:journals/bioinformatics/ZhangYYLCMQT04,
author = {Lida Zhang and
Dejun Yuan and
Shunwu Yu and
Zhugang Li and
Youfang Cao and
Zhiqi Miao and
Hongmei Qian and
Kexuan Tang},
title = {Preference of simple sequence repeats in coding and non-coding regions
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journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1081--1086},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth043},
doi = {10.1093/BIOINFORMATICS/BTH043},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhangYYLCMQT04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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author = {Ren Zhang and
Chun{-}Ting Zhang},
title = {A systematic method to identify genomic islands and its applications
in analyzing the genomes of Corynebacterium glutamicum and Vibrio
vulnificus {CMCP6} chromosome {I}},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {612--622},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg453},
doi = {10.1093/BIOINFORMATICS/BTG453},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhangZ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhangZLSC04,
author = {Yong Zhang and
Zhihua Zhang and
Lunjiang Ling and
Baochen Shi and
Runsheng Chen},
title = {Conservation analysis of small {RNA} genes in Escherichia coli},
journal = {Bioinform.},
volume = {20},
number = {5},
pages = {599--603},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg457},
doi = {10.1093/BIOINFORMATICS/BTG457},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhangZLSC04.bib},
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author = {Li Zhang and
Aidong Zhang and
Murali Ramanathan},
title = {VizStruct: exploratory visualization for gene expression profiling},
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volume = {20},
number = {1},
pages = {85--92},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/btg377},
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timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhangZR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
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author = {Jing Hua Zhao},
title = {2LD, {GENECOUNTING} and {HAP:} computer programs for linkage disequilibrium
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journal = {Bioinform.},
volume = {20},
number = {8},
pages = {1325--1326},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth071},
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timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/Zhao04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhengCJL04,
author = {Jie Zheng and
Timothy J. Close and
Tao Jiang and
Stefano Lonardi},
title = {Efficient selection of unique and popular oligos for large {EST} databases},
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volume = {20},
number = {13},
pages = {2101--2112},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth210},
doi = {10.1093/BIOINFORMATICS/BTH210},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhengCJL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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author = {C. J. Zheng and
H. Zhou and
B. Xie and
Lianyi Han and
Chun Wei Yap and
Yu Zong Chen},
title = {{TRMP:} a database of therapeutically relevant multiple pathways},
journal = {Bioinform.},
volume = {20},
number = {14},
pages = {2236--2241},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth233},
doi = {10.1093/BIOINFORMATICS/BTH233},
timestamp = {Mon, 22 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhengZXHYC04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhouL04,
author = {Qing Zhou and
Jun S. Liu},
title = {Modeling within-motif dependence for transcription factor binding
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journal = {Bioinform.},
volume = {20},
number = {6},
pages = {909--916},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth006},
doi = {10.1093/BIOINFORMATICS/BTH006},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhouL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhouWPIBD04,
author = {Xiaobo Zhou and
Xiaodong Wang and
Ranadip Pal and
Ivan Ivanov and
Michael L. Bittner and
Edward R. Dougherty},
title = {A Bayesian connectivity-based approach to constructing probabilistic
gene regulatory networks},
journal = {Bioinform.},
volume = {20},
number = {17},
pages = {2918--2927},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth318},
doi = {10.1093/BIOINFORMATICS/BTH318},
timestamp = {Fri, 01 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhouWPIBD04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhouZSST04,
author = {Guodong Zhou and
Jie Zhang and
Jian Su and
Dan Shen and
Chew Lim Tan},
title = {Recognizing names in biomedical texts: a machine learning approach},
journal = {Bioinform.},
volume = {20},
number = {7},
pages = {1178--1190},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth060},
doi = {10.1093/BIOINFORMATICS/BTH060},
timestamp = {Mon, 17 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhouZSST04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhuDVBMK04,
author = {Qingsong Zhu and
Youping Deng and
Phaneendra Vanka and
Susan J. Brown and
Subbaratnam Muthukrishnan and
Karl J. Kramer},
title = {Computational identification of novel chitinase-like proteins in the
Drosophila melanogaster genome},
journal = {Bioinform.},
volume = {20},
number = {2},
pages = {161--169},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth020},
doi = {10.1093/BIOINFORMATICS/BTH020},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhuDVBMK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhuHOWS04,
author = {Huaiqiu Zhu and
Gang{-}Qing Hu and
Zheng{-}Qing Ouyang and
Jin Wang and
Zhen{-}Su She},
title = {Accuracy improvement for identifying translation initiation sites
in microbial genomes},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3308--3317},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth390},
doi = {10.1093/BIOINFORMATICS/BTH390},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ZhuHOWS04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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