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export results for "toc:db/conf/wabi/wabi2015.bht:"
download as .bib file
@inproceedings{DBLP:conf/wabi/DrinkwaterC15,
author = {Benjamin Drinkwater and
Michael A. Charleston},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {A Sub-quadratic Time and Space Complexity Solution for the Dated Tree
Reconciliation Problem for Select Tree Topologies},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {93--107},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_7},
doi = {10.1007/978-3-662-48221-6\_7},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/DrinkwaterC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/DumaCBCCL15,
author = {Denise Duma and
Francesca Cordero and
Marco Beccuti and
Gianfranco Ciardo and
Timothy J. Close and
Stefano Lonardi},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {Scrible: Ultra-Accurate Error-Correction of Pooled Sequenced Reads},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {162--174},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_12},
doi = {10.1007/978-3-662-48221-6\_12},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/wabi/DumaCBCCL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/FridG15,
author = {Yelena Frid and
Dan Gusfield},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {A Sparsified Four-Russian Algorithm for {RNA} Folding},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {271--285},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_20},
doi = {10.1007/978-3-662-48221-6\_20},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/FridG15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/GibsonG15,
author = {Todd A. Gibson and
Debra S. Goldberg},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {The Topological Profile of a Model of Protein Network Evolution Can
Direct Model Improvement},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {40--52},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_3},
doi = {10.1007/978-3-662-48221-6\_3},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/GibsonG15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/GrossiIMPPRV15,
author = {Roberto Grossi and
Costas S. Iliopoulos and
Robert Mercas and
Nadia Pisanti and
Solon P. Pissis and
Ahmad Retha and
Fatima Vayani},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {Circular Sequence Comparison with q-grams},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {203--216},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_15},
doi = {10.1007/978-3-662-48221-6\_15},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/GrossiIMPPRV15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/GusfieldN15,
author = {Dan Gusfield and
Rasmus Nielsen},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {Association Mapping for Compound Heterozygous Traits Using Phenotypic
Distance and Integer Programming},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {136--147},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_10},
doi = {10.1007/978-3-662-48221-6\_10},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/wabi/GusfieldN15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/HenriquesM15,
author = {Rui Henriques and
Sara C. Madeira},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {BicNET: Efficient Biclustering of Biological Networks to Unravel Non-Trivial
Modules},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {1--15},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_1},
doi = {10.1007/978-3-662-48221-6\_1},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/HenriquesM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/HolleyWS15,
author = {Guillaume Holley and
Roland Wittler and
Jens Stoye},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {Bloom Filter Trie - {A} Data Structure for Pan-Genome Storage},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {217--230},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_16},
doi = {10.1007/978-3-662-48221-6\_16},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/wabi/HolleyWS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/HujdurovicKMRT15,
author = {Ademir Hujdurovic and
Ursa Kacar and
Martin Milanic and
Bernard Ries and
Alexandru I. Tomescu},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {Finding a Perfect Phylogeny from Mixed Tumor Samples},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {80--92},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_6},
doi = {10.1007/978-3-662-48221-6\_6},
timestamp = {Sat, 16 Sep 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/HujdurovicKMRT15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/LafondE15,
author = {Manuel Lafond and
Nadia El{-}Mabrouk},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {Orthology Relation and Gene Tree Correction: Complexity Results},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {66--79},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_5},
doi = {10.1007/978-3-662-48221-6\_5},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/LafondE15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/MargalitBH15,
author = {Yaron Margalit and
Yael Baran and
Eran Halperin},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {Multiple-Ancestor Localization for Recently Admixed Individuals},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {121--135},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_9},
doi = {10.1007/978-3-662-48221-6\_9},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/MargalitBH15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/MiclotteHDAF15,
author = {Giles Miclotte and
Mahdi Heydari and
Piet Demeester and
Pieter Audenaert and
Jan Fostier},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {Jabba: Hybrid Error Correction for Long Sequencing Reads Using Maximal
Exact Matches},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {175--188},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_13},
doi = {10.1007/978-3-662-48221-6\_13},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/MiclotteHDAF15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/OrensteinB15,
author = {Yaron Orenstein and
Bonnie Berger},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {Efficient Design of Compact Unstructured {RNA} Libraries Covering
All k-mers},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {308--325},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_23},
doi = {10.1007/978-3-662-48221-6\_23},
timestamp = {Fri, 02 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/wabi/OrensteinB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/OunitL15,
author = {Rachid Ounit and
Stefano Lonardi},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {Higher Classification Accuracy of Short Metagenomic Reads by Discriminative
Spaced k-mers},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {286--295},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_21},
doi = {10.1007/978-3-662-48221-6\_21},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/OunitL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/Pizzi15,
author = {Cinzia Pizzi},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {A Filtering Approach for Alignment-Free Biosequences Comparison with
Mismatches},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {231--242},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_17},
doi = {10.1007/978-3-662-48221-6\_17},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/Pizzi15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/SeferK15,
author = {Emre Sefer and
Carl Kingsford},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {Semi-nonparametric Modeling of Topological Domain Formation from Epigenetic
Data},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {148--161},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_11},
doi = {10.1007/978-3-662-48221-6\_11},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/SeferK15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/SichenZLZPCAMS15,
author = {Zhong Sichen and
Lu Zhao and
Yan Liang and
Mohammadzaman Zamani and
Rob Patro and
Rezaul Chowdhury and
Esther M. Arkin and
Joseph S. B. Mitchell and
Steven Skiena},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {Optimizing Read Reversals for Sequence Compression - (Extended Abstract)},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {189--202},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_14},
doi = {10.1007/978-3-662-48221-6\_14},
timestamp = {Tue, 03 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/wabi/SichenZLZPCAMS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/SilvaDZS15,
author = {Poly H. da Silva and
Simone Dantas and
Chunfang Zheng and
David Sankoff},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {Graph-Theoretic Modelling of the Domain Chaining Problem},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {296--307},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_22},
doi = {10.1007/978-3-662-48221-6\_22},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/SilvaDZS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/SmolyCSLZ15,
author = {Ilan Y. Smoly and
Amir Carmel and
Yonat Shemer{-}Avni and
Esti Yeger Lotem and
Michal Ziv{-}Ukelson},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {Algorithms for Regular Tree Grammar Network Search and Their Application
to Mining Human-Viral Infection Patterns},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {53--65},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_4},
doi = {10.1007/978-3-662-48221-6\_4},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/SmolyCSLZ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/SunCTM15,
author = {Yihan Sun and
Joseph Crawford and
Jie Tang and
Tijana Milenkovic},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {Simultaneous Optimization of both Node and Edge Conservation in Network
Alignment via {WAVE}},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {16--39},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_2},
doi = {10.1007/978-3-662-48221-6\_2},
timestamp = {Fri, 14 Sep 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/SunCTM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/SwensonB15,
author = {Krister M. Swenson and
Mathieu Blanchette},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {Models and Algorithms for Genome Rearrangement with Positional Constraints},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {243--256},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_18},
doi = {10.1007/978-3-662-48221-6\_18},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/SwensonB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/WillJ15,
author = {Sebastian Will and
Hosna Jabbari},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {Sparse {RNA} Folding Revisited: Space-Efficient Minimum Free Energy
Prediction},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {257--270},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_19},
doi = {10.1007/978-3-662-48221-6\_19},
timestamp = {Mon, 01 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/WillJ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/ZhouLRHT15,
author = {Jun Zhou and
Yu Lin and
Vaibhav Rajan and
William Hoskins and
Jijun Tang},
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {Maximum Parsimony Analysis of Gene Copy Number Changes},
booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
pages = {108--120},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6\_8},
doi = {10.1007/978-3-662-48221-6\_8},
timestamp = {Tue, 31 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/ZhouLRHT15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/wabi/2015,
editor = {Mihai Pop and
H{\'{e}}l{\`{e}}ne Touzet},
title = {Algorithms in Bioinformatics - 15th International Workshop, {WABI}
2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9289},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-662-48221-6},
doi = {10.1007/978-3-662-48221-6},
isbn = {978-3-662-48220-9},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/2015.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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