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@inproceedings{DBLP:conf/biostec/AndryDMABD16,
  author       = {Fran{\c{c}}ois Andry and
                  Nevenka Dimitrova and
                  Alexander Mankovich and
                  Vartika Agrawal and
                  Anas Bder and
                  Ariel David},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {PAPAyA: {A} Highly Scalable Cloud-based Framework for Genomic Processing},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {198--206},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005668401980206},
  doi          = {10.5220/0005668401980206},
  timestamp    = {Sat, 21 Sep 2019 10:38:11 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/AndryDMABD16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/AnnilaNR16,
  author       = {Teppo Annila and
                  Ramakanth Neeli{-}Venkata and
                  Andre S. Ribeiro},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Robustness to Sub-optimal Temperatures of the Processes of Tsr Cluster
                  Formation and Positioning in Escherichia Coli},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {137--141},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005647001370141},
  doi          = {10.5220/0005647001370141},
  timestamp    = {Fri, 26 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/AnnilaNR16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/ChuXXT16,
  author       = {Sidney K. Chu and
                  Samuel Guanglin Xu and
                  Feng Xu and
                  Nelson L. S. Tang},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Gene-gene Interaction Analysis by {IAC} (Interaction Analysis by Chi-Square)
                  - {A} Novel Biological Constraint-based Interaction Analysis Framework},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {142--150},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005654601420150},
  doi          = {10.5220/0005654601420150},
  timestamp    = {Fri, 26 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/ChuXXT16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/CorreiaAO16,
  author       = {Fernanda Brito Correia and
                  Joel P. Arrais and
                  Jos{\'{e}} Lu{\'{\i}}s Oliveira},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Prediction of Cancer using Network Topological Features},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {207--215},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005696202070215},
  doi          = {10.5220/0005696202070215},
  timestamp    = {Fri, 26 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/CorreiaAO16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/DangL16,
  author       = {Vinh Quoc Dang and
                  Chiou Peng Lam},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Gene Selection using a Hybrid Memetic and Nearest Shrunken Centroid
                  Algorithm},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {190--197},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005665201900197},
  doi          = {10.5220/0005665201900197},
  timestamp    = {Mon, 06 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/biostec/DangL16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/EndoTCMS16,
  author       = {Yuki Endo and
                  Fubito Toyama and
                  Chikafumi Chiba and
                  Hiroshi Mori and
                  Kenji Shoji},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Memory Efficient de novo Assembly Algorithm using Disk Streaming of
                  K-mers},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {266--271},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005798302660271},
  doi          = {10.5220/0005798302660271},
  timestamp    = {Fri, 26 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/EndoTCMS16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/FassettiGLPRS16,
  author       = {Fabio Fassetti and
                  Claudia Giallombardo and
                  Ofelia Leone and
                  Luigi Palopoli and
                  Simona E. Rombo and
                  Adolfo Saiardi},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Discovering New Proteins in Plant Mitochondria by {RNA} Editing Simulation},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {182--189},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005664901820189},
  doi          = {10.5220/0005664901820189},
  timestamp    = {Mon, 18 Jul 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/FassettiGLPRS16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/GunduzS16,
  author       = {Hakan G{\"{u}}nd{\"{u}}z and
                  Ibrahim S{\"{u}}zer},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {An Extension to Local Network Alignment using Hidden Markov Models
                  (HMMs)},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {253--257},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005742102530257},
  doi          = {10.5220/0005742102530257},
  timestamp    = {Fri, 09 Apr 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/GunduzS16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/HanczarB16,
  author       = {Blaise Hanczar and
                  Avner Bar{-}Hen},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Controlling the Cost of Prediction in using a Cascade of Reject Classifiers
                  for Personalized Medicine},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {42--50},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005685500420050},
  doi          = {10.5220/0005685500420050},
  timestamp    = {Fri, 26 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/HanczarB16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/HayashidaK16,
  author       = {Morihiro Hayashida and
                  Hitoshi Koyano},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Integer Linear Programming Approach to Median and Center Strings for
                  a Probability Distribution on a Set of Strings},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {35--41},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005666400350041},
  doi          = {10.5220/0005666400350041},
  timestamp    = {Fri, 26 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/HayashidaK16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/HeHNA16,
  author       = {Fei He and
                  Akiyoshi Hanai and
                  Hiroshi Nagamochi and
                  Tatsuya Akutsu},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Enumerating Naphthalene Isomers of Tree-like Chemical Graphs},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {258--265},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005783902580265},
  doi          = {10.5220/0005783902580265},
  timestamp    = {Fri, 09 Apr 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/HeHNA16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/HerndonC16,
  author       = {Nic Herndon and
                  Doina Caragea},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Ab initio Splice Site Prediction with Simple Domain Adaptation Classifiers},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {245--252},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005710502450252},
  doi          = {10.5220/0005710502450252},
  timestamp    = {Sun, 25 Jul 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/HerndonC16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/Ito16,
  author       = {Sohei Ito},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Temporal Logic based Framework to Model and Analyse Gene Networks
                  with Alternative Splicing},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {151--158},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005655001510158},
  doi          = {10.5220/0005655001510158},
  timestamp    = {Fri, 26 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/Ito16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/JeongGPE16,
  author       = {Jieun Jeong and
                  Mudit Gupta and
                  Andrey Poleshko and
                  Jonathan A. Epstein},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Combinatorial Identification of Broad Association Regions with ChIP-seq
                  Data},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {27--34},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005663400270034},
  doi          = {10.5220/0005663400270034},
  timestamp    = {Fri, 26 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/JeongGPE16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/KalinaH16,
  author       = {Jan Kalina and
                  Jaroslav Hlinka},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Highly Robust Classification: {A} Regularized Approach for Omics Data},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {17--26},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005623500170026},
  doi          = {10.5220/0005623500170026},
  timestamp    = {Fri, 26 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/KalinaH16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/KardynskaSNJWK16,
  author       = {Malgorzata Kardynska and
                  Jaroslaw Smieja and
                  Anna Naumowicz and
                  Patryk Janus and
                  Piotr Widlak and
                  Marek Kimmel},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Sloppy/Stiff Parameters Rankings in Sensitivity Analysis of Signaling
                  Pathways},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {278--283},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005820002780283},
  doi          = {10.5220/0005820002780283},
  timestamp    = {Fri, 26 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/KardynskaSNJWK16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/KhalidS16,
  author       = {Zoya Khalid and
                  Ugur Sezerman},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {{ZK} Drugresist - Automatic Extraction of Drug Resistance Mutations
                  and Expression Level Changes from Medline Abstracts},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {168--173},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005664501680173},
  doi          = {10.5220/0005664501680173},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/KhalidS16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/KuosmanenSRMT16,
  author       = {Anna Kuosmanen and
                  Ahmed Sobih and
                  Romeo Rizzi and
                  Veli M{\"{a}}kinen and
                  Alexandru I. Tomescu},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {On using Longer RNA-seq Reads to Improve Transcript Prediction Accuracy},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {272--277},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005819702720277},
  doi          = {10.5220/0005819702720277},
  timestamp    = {Thu, 15 Jun 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/KuosmanenSRMT16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/MneimnehA16,
  author       = {Saad Mneimneh and
                  Syed Ali Ahmed},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {A Sampling Approach for Multiple {RNA} Interaction - Finding Sub-optimal
                  Solutions Fast},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {75--84},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005707900750084},
  doi          = {10.5220/0005707900750084},
  timestamp    = {Fri, 26 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/MneimnehA16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/NarciOA16,
  author       = {K{\"{u}}bra Narci and
                  Hasan Ogul and
                  Mahinur S. Akkaya},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Sequence-based MicroRNA Clustering},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {107--116},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005552901070116},
  doi          = {10.5220/0005552901070116},
  timestamp    = {Fri, 26 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/NarciOA16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/NoborioKM16,
  author       = {Hiroshi Noborio and
                  Takahiro Kunii and
                  Kiminori Mizushino},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Comparison of GPU-based and CPU-based Algorithms for Determining the
                  Minimum Distance between a {CUSA} Scalper and Blood Vessels},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {128--136},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005634801280136},
  doi          = {10.5220/0005634801280136},
  timestamp    = {Fri, 26 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/NoborioKM16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/PugachevaKK16,
  author       = {Valentina Pugacheva and
                  Alexander Korotkov and
                  Eugene V. Korotkov},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Search for Latent Periodicity in Amino Acid Sequences with Insertions
                  and Deletions},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {117--127},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005630401170127},
  doi          = {10.5220/0005630401170127},
  timestamp    = {Fri, 26 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/PugachevaKK16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/RazettiDMB16,
  author       = {Agustina Razetti and
                  Xavier Descombes and
                  Caroline Medioni and
                  Florence Besse},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Statistical Characterization, Modelling and Classification of Morphological
                  Changes in imp Mutant Drosophila Gamma Neurons},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {63--74},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005703800630074},
  doi          = {10.5220/0005703800630074},
  timestamp    = {Wed, 08 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/RazettiDMB16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/RehmanZBI16,
  author       = {Hafeez Ur Rehman and
                  Usman Zafar and
                  Alfredo Benso and
                  Naveed Islam},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {A Structure based Approach for Accurate Prediction of Protein Interactions
                  Networks},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {237--244},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005705002370244},
  doi          = {10.5220/0005705002370244},
  timestamp    = {Fri, 09 Apr 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/RehmanZBI16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/RomanL16,
  author       = {Jos{\'{e}} Fabi{\'{a}}n Reyes Rom{\'{a}}n and
                  Oscar Pastor L{\'{o}}pez},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Use of GeIS for Early Diagnosis of Alcohol Sensitivity},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {284--289},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005822902840289},
  doi          = {10.5220/0005822902840289},
  timestamp    = {Thu, 01 Sep 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/RomanL16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/SarrMFR16,
  author       = {Abdoulaye Sarr and
                  Petra Miglierini and
                  Alexandra Fronville and
                  Vincent Rodin},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Directional Cellular Dynamics for Tissue Morphogenesis and Tumour
                  Characterization by Aggressive Cancer Cells Identification},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {290--295},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005830702900295},
  doi          = {10.5220/0005830702900295},
  timestamp    = {Fri, 26 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/SarrMFR16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/SatoHO16,
  author       = {Keiko Sato and
                  Toshihide Hara and
                  Masanori Ohya},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {A Coding Theoretical Approach to Predict Sequence Changes in {H5N1}
                  Influenza {A} Virus Hemagglutinin},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {159--167},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005659701590167},
  doi          = {10.5220/0005659701590167},
  timestamp    = {Fri, 26 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/SatoHO16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/ShafahiBA16,
  author       = {Mohammad Shafahi and
                  Hayo Bart and
                  Hamideh Afsarmanesh},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {BioMed Xplorer - Exploring (Bio)Medical Knowledge using Linked Data},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {51--62},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005700300510062},
  doi          = {10.5220/0005700300510062},
  timestamp    = {Fri, 26 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/ShafahiBA16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/ToriiFFAM16,
  author       = {Wataru Torii and
                  Shinpei Fujimoto and
                  Masahiro Furukawa and
                  Hideyuki Ando and
                  Taro Maeda},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Techniques to Control Robot Action Consisting of Multiple Segmented
                  Motions using Recurrent Neural Network with Butterfly Structure},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {174--181},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005664801740181},
  doi          = {10.5220/0005664801740181},
  timestamp    = {Sun, 25 Oct 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/ToriiFFAM16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/Vazquez-OrtizRL16,
  author       = {Karla Esmeralda Vazquez Ortiz and
                  Jean{-}Michel Richer and
                  David Lesaint},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Strategies for Phylogenetic Reconstruction - For the Maximum Parsimony
                  Problem},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {226--236},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005702902260236},
  doi          = {10.5220/0005702902260236},
  timestamp    = {Fri, 26 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/Vazquez-OrtizRL16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/VlaicAKNEMG16,
  author       = {Sebastian Vlaic and
                  Robert Altwasser and
                  Peter Kupfer and
                  Carol L. Nilsson and
                  Mark R. Emmett and
                  Anke Meyer{-}Baese and
                  Reinhard Guthke},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Inference of Predictive Phospho-regulatory Networks from {LC-MS/MS}
                  Phosphoproteomics Data},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {85--91},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005743000850091},
  doi          = {10.5220/0005743000850091},
  timestamp    = {Sun, 02 Jun 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/VlaicAKNEMG16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/WestA16,
  author       = {Sean West and
                  Hesham H. Ali},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {On the Impact of Granularity in Extracting Knowledge from Bioinformatics
                  Data},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {92--103},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005778700920103},
  doi          = {10.5220/0005778700920103},
  timestamp    = {Fri, 11 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/WestA16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/YousefAK16,
  author       = {Malik Yousef and
                  Jens Allmer and
                  Waleed Khalifa},
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Feature Selection for MicroRNA Target Prediction - Comparison of One-Class
                  Feature Selection Methodologies},
  booktitle    = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  pages        = {216--225},
  publisher    = {SciTePress},
  year         = {2016},
  url          = {https://doi.org/10.5220/0005701602160225},
  doi          = {10.5220/0005701602160225},
  timestamp    = {Sun, 02 Jun 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/YousefAK16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/biostec/2016bi,
  editor       = {James P. Gilbert and
                  Haim Azhari and
                  Hesham H. Ali and
                  Carla Quint{\~{a}}o and
                  Jan Sliwa and
                  Carolina Ruiz and
                  Ana L. N. Fred and
                  Hugo Gamboa},
  title        = {Proceedings of the 9th International Joint Conference on Biomedical
                  Engineering Systems and Technologies {(BIOSTEC} 2016) - Volume 3:
                  BIOINFORMATICS, Rome, Italy, February 21-23, 2016},
  publisher    = {SciTePress},
  year         = {2016},
  isbn         = {978-989-758-170-0},
  timestamp    = {Sat, 21 Sep 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/biostec/2016bi.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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