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@inproceedings{DBLP:conf/isbra/AbbasiATDA23,
author = {Ahtisham Fazeel Abbasi and
Muhammad Nabeel Asim and
Johan Trygg and
Andreas Dengel and
Sheraz Ahmed},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Deep Learning Architectures for the Prediction of YY1-Mediated Chromatin
Loops},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {72--84},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_6},
doi = {10.1007/978-981-99-7074-2\_6},
timestamp = {Tue, 10 Oct 2023 15:52:57 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AbbasiATDA23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AliCP23,
author = {Sarwan Ali and
Pin{-}Yu Chen and
Murray Patterson},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Unveiling the Robustness of Machine Learning Models in Classifying
{COVID-19} Spike Sequences},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {1--15},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_1},
doi = {10.1007/978-981-99-7074-2\_1},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AliCP23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AliCP23a,
author = {Sarwan Ali and
Prakash Chourasia and
Murray Patterson},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {PDB2Vec: Using 3D Structural Information for Improved Protein Analysis},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {376--386},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_29},
doi = {10.1007/978-981-99-7074-2\_29},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AliCP23a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AliMCP23,
author = {Sarwan Ali and
Haris Mansoor and
Prakash Chourasia and
Murray Patterson},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Hist2Vec: Kernel-Based Embeddings for Biological Sequence Classification},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {387--397},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_30},
doi = {10.1007/978-981-99-7074-2\_30},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AliMCP23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AliSKP23,
author = {Sarwan Ali and
Usama Sardar and
Imdadullah Khan and
Murray Patterson},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Efficient Sequence Embedding for SARS-CoV-2 Variants Classification},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {16--30},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_2},
doi = {10.1007/978-981-99-7074-2\_2},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/AliSKP23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AnXG23,
author = {Ying An and
Anxuan Xiong and
Lin Guo},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {{DCNN:} Dual-Level Collaborative Neural Network for Imbalanced Heart
Anomaly Detection},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {398--408},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_31},
doi = {10.1007/978-981-99-7074-2\_31},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AnXG23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AndersenBFFMS23,
author = {Jakob L. Andersen and
Sissel Banke and
Rolf Fagerberg and
Christoph Flamm and
Daniel Merkle and
Peter F. Stadler},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {On the Realisability of Chemical Pathways},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {409--419},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_32},
doi = {10.1007/978-981-99-7074-2\_32},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AndersenBFFMS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BasakSDHMPSWSR23,
author = {Joyanta Basak and
Ahmed Soliman and
Nachiket Deo and
Kenneth Haase and
Anup Mathur and
Krista Park and
Rebecca C. Steorts and
Daniel Weinberg and
Sartaj Sahni and
Sanguthevar Rajasekaran},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {On Computing the Jaro Similarity Between Two Strings},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {31--44},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_3},
doi = {10.1007/978-981-99-7074-2\_3},
timestamp = {Tue, 20 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/BasakSDHMPSWSR23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BiJYZZW23,
author = {Xuehua Bi and
Chunyang Jiang and
Cheng Yan and
Kai Zhao and
Linlin Zhang and
Jianxin Wang},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Identifying miRNA-Disease Associations Based on Simple Graph Convolution
with DropMessage and Jumping Knowledge},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {45--57},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_4},
doi = {10.1007/978-981-99-7074-2\_4},
timestamp = {Mon, 26 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/BiJYZZW23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BlekerGL23,
author = {Carissa Bleker and
Stephen K. Grady and
Michael A. Langston},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {A Brief Study of Gene Co-expression Thresholding Algorithms},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {420--430},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_33},
doi = {10.1007/978-981-99-7074-2\_33},
timestamp = {Sat, 14 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BlekerGL23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BolteauBDG23,
author = {Mathieu Bolteau and
J{\'{e}}r{\'{e}}mie Bourdon and
Laurent David and
Carito Guziolowski},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Inferring Boolean Networks from Single-Cell Human Embryo Datasets},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {431--441},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_34},
doi = {10.1007/978-981-99-7074-2\_34},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BolteauBDG23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChourasiaMAP23,
author = {Prakash Chourasia and
Taslim Murad and
Sarwan Ali and
Murray Patterson},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Enhancing t-SNE Performance for Biological Sequencing Data Through
Kernel Selection},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {442--452},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_35},
doi = {10.1007/978-981-99-7074-2\_35},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ChourasiaMAP23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/EriksenAFM23,
author = {Casper Asbj{\o}rn Eriksen and
Jakob Lykke Andersen and
Rolf Fagerberg and
Daniel Merkle},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Reconciling Inconsistent Molecular Structures from Biochemical Databases},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {58--71},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_5},
doi = {10.1007/978-981-99-7074-2\_5},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/EriksenAFM23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/FarooqNJZ23,
author = {Hafsa Farooq and
Daniel Novikov and
Akshay Juyal and
Alexander Zelikovsky},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Genetic Algorithm with Evolutionary Jumps},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {453--463},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_36},
doi = {10.1007/978-981-99-7074-2\_36},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/FarooqNJZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GuanAGW23,
author = {Yuxia Guan and
Ying An and
Fengyi Guo and
Jianxin Wang},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {MPFNet: {ECG} Arrhythmias Classification Based on Multi-perspective
Feature Fusion},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {85--96},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_7},
doi = {10.1007/978-981-99-7074-2\_7},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GuanAGW23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HossainRLPFW23,
author = {Md. Tofazzal Hossain and
Md. Selim Reza and
Xuelei Li and
Yin Peng and
Shengzhong Feng and
Yanjie Wei},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {{PCPI:} Prediction of circRNA and Protein Interaction Using Machine
Learning Method},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {97--106},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_8},
doi = {10.1007/978-981-99-7074-2\_8},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HossainRLPFW23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HouSLLZ23,
author = {Xiaodi Hou and
Guoming Sang and
Zhi Liu and
Xiaobo Li and
Yijia Zhang},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Radiology Report Generation via Visual Recalibration and Context Gating-Aware},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {107--119},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_9},
doi = {10.1007/978-981-99-7074-2\_9},
timestamp = {Thu, 01 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/HouSLLZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/KatrielMKZSS23,
author = {Guy Katriel and
Udi Mahanaymi and
Christoph Koutschan and
Doron Zeilberger and
Mike Steel and
Sagi Snir},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Using Generating Functions to Prove Additivity of Gene-Neighborhood
Based Phylogenetics - Extended Abstract},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {120--135},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_10},
doi = {10.1007/978-981-99-7074-2\_10},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/KatrielMKZSS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LeiHYCWWL23,
author = {Hongyang Lei and
Huazhen Huang and
Bokai Yang and
Guosheng Cui and
Ruxin Wang and
Dan Wu and
Ye Li},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {{TCSA:} {A} Text-Guided Cross-View Medical Semantic Alignment Framework
for Adaptive Multi-view Visual Representation Learning},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {136--149},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_11},
doi = {10.1007/978-981-99-7074-2\_11},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LeiHYCWWL23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiZWL23,
author = {Yulong Li and
Hongming Zhu and
Xiaowen Wang and
Qin Liu},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {HetBiSyn: Predicting Anticancer Synergistic Drug Combinations Featuring
Bi-perspective Drug Embedding with Heterogeneous Data},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {464--475},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_37},
doi = {10.1007/978-981-99-7074-2\_37},
timestamp = {Sat, 14 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiZWL23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LohneysenSVYLHS23,
author = {Sarah von L{\"{o}}hneysen and
Thomas Spicher and
Yuliia Varenyk and
Hua{-}Ting Yao and
Ronny Lorenz and
Ivo L. Hofacker and
Peter F. Stadler},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Phylogenetic Information as Soft Constraints in {RNA} Secondary Structure
Prediction},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {267--279},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_21},
doi = {10.1007/978-981-99-7074-2\_21},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LohneysenSVYLHS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LuanHHLJHDYGCN23,
author = {Haijing Luan and
Taiyuan Hu and
Jifang Hu and
Ruilin Li and
Detao Ji and
Jiayin He and
Xiaohong Duan and
Chunyan Yang and
Yajun Gao and
Fan Chen and
Beifang Niu},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Multi-class Cancer Classification of Whole Slide Images Through Transformer
and Multiple Instance Learning},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {150--164},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_12},
doi = {10.1007/978-981-99-7074-2\_12},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LuanHHLJHDYGCN23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MaZSCL23,
author = {Huidong Ma and
Cheng Zhong and
Hui Sun and
Danyang Chen and
Haixiang Lin},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {ricME: Long-Read Based Mobile Element Variant Detection Using Sequence
Realignment and Identity Calculation},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {165--177},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_13},
doi = {10.1007/978-981-99-7074-2\_13},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MaZSCL23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MelkusSSRLCV23,
author = {Gatis Melkus and
Sandra Silina and
Andrejs Sizovs and
Peteris Rucevskis and
Lelde Lace and
Edgars Celms and
Juris Viksna},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Clique-Based Topological Characterization of Chromatin Interaction
Hubs},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {476--486},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_38},
doi = {10.1007/978-981-99-7074-2\_38},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MelkusSSRLCV23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/QiaoLYDW23,
author = {Tian{-}Jing Qiao and
Feng Li and
Shasha Yuan and
Ling{-}Yun Dai and
Juan Wang},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {scGASI: {A} Graph Autoencoder-Based Single-Cell Integration Clustering
Method},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {178--189},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_14},
doi = {10.1007/978-981-99-7074-2\_14},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/QiaoLYDW23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/RenLLLS23,
author = {Qianqian Ren and
Yahan Li and
Feng Li and
Jin{-}Xing Liu and
Junliang Shang},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {{ABCAE:} Artificial Bee Colony Algorithm with Adaptive Exploitation
for Epistatic Interaction Detection},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {190--201},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_15},
doi = {10.1007/978-981-99-7074-2\_15},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/RenLLLS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/RossignoloC23,
author = {Enrico Rossignolo and
Matteo Comin},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {{USTAR:} Improved Compression of k-mer Sets with Counters Using de
Bruijn Graphs},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {202--213},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_16},
doi = {10.1007/978-981-99-7074-2\_16},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/RossignoloC23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SaghaianSIZ23,
author = {Hossein Saghaian and
Pavel Skums and
Yurij Ionov and
Alex Zelikovsky},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Graph-Based Motif Discovery in Mimotope Profiles of Serum Antibody
Repertoire},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {214--226},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_17},
doi = {10.1007/978-981-99-7074-2\_17},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SaghaianSIZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SahooAPZ23,
author = {Bikram Sahoo and
Temitope Adeyeha and
Zandra Pinnix and
Alex Zelikovsky},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Exploring Racial Disparities in Triple-Negative Breast Cancer: Insights
from Feature Selection Algorithms},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {487--497},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_39},
doi = {10.1007/978-981-99-7074-2\_39},
timestamp = {Sat, 14 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SahooAPZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SahooPZ23,
author = {Bikram Sahoo and
Zandra Pinnix and
Alex Zelikovsky},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Deep Learning Reveals Biological Basis of Racial Disparities in Quadruple-Negative
Breast Cancer},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {498--508},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_40},
doi = {10.1007/978-981-99-7074-2\_40},
timestamp = {Sat, 14 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SahooPZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SalgadoFF23,
author = {Andr{\'{e}} Salgado and
Francisco Fernandes and
Ana Teresa Freitas},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {{CSA-MEM:} Enhancing Circular {DNA} Multiple Alignment Through Text
Indexing Algorithms},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {509--517},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_41},
doi = {10.1007/978-981-99-7074-2\_41},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SalgadoFF23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SardarAASBKP23,
author = {Usama Sardar and
Sarwan Ali and
Muhammad Sohaib Ayub and
Muhammad Shoaib and
Khurram Bashir and
Imdadullah Khan and
Murray Patterson},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Sequence-Based Nanobody-Antigen Binding Prediction},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {227--240},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_18},
doi = {10.1007/978-981-99-7074-2\_18},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SardarAASBKP23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SiqueiraAOJFD23,
author = {Gabriel Siqueira and
Alexsandro Oliveira Alexandrino and
Andre Rodrigues Oliveira and
G{\'{e}}raldine Jean and
Guillaume Fertin and
Zanoni Dias},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Approximating Rearrangement Distances with Replicas and Flexible Intergenic
Regions},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {241--254},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_19},
doi = {10.1007/978-981-99-7074-2\_19},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SiqueiraAOJFD23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SouzaML23,
author = {Michael Souza and
Nilton Maia and
Carlile Lavor},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {The Ordered Covering Problem in Distance Geometry},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {255--266},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_20},
doi = {10.1007/978-981-99-7074-2\_20},
timestamp = {Sat, 14 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SouzaML23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SturtzAZLQ23,
author = {Jordan Sturtz and
Richard Annan and
Binhai Zhu and
Xiaowen Liu and
Letu Qingge},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {A Convolutional Denoising Autoencoder for Protein Scaffold Filling},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {518--529},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_42},
doi = {10.1007/978-981-99-7074-2\_42},
timestamp = {Sat, 14 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SturtzAZLQ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/TayebiJZP23,
author = {Zahra Tayebi and
Akshay Juyal and
Alexander Zelikovsky and
Murray Patterson},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Simulating Tumor Evolution from scDNA-Seq as an Accumulation of both
SNVs and CNAs},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {530--540},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_43},
doi = {10.1007/978-981-99-7074-2\_43},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/TayebiJZP23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangKLW23,
author = {Tai{-}Ge Wang and
Xiang{-}Zhen Kong and
Shengjun Li and
Juan Wang},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {{CHLPCA:} Correntropy-Based Hypergraph Regularized Sparse {PCA} for
Single-Cell Type Identification},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {541--551},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_44},
doi = {10.1007/978-981-99-7074-2\_44},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WangKLW23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangZM23,
author = {Shaokai Wang and
Ming Zhu and
Bin Ma},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {NeoMS: Identification of Novel {MHC-I} Peptides with Tandem Mass Spectrometry},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {280--291},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_22},
doi = {10.1007/978-981-99-7074-2\_22},
timestamp = {Thu, 19 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WangZM23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/XuKBW23,
author = {Shuo Xu and
Liping Kang and
Xingyu Bi and
Xiaohui Wu},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Integrative Analysis of Gene Expression and Alternative Polyadenylation
from Single-Cell RNA-seq Data},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {312--324},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_24},
doi = {10.1007/978-981-99-7074-2\_24},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/XuKBW23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/XuTJWZZ23,
author = {Huixiu Xu and
Xin Tong and
Haitao Jiang and
Lusheng Wang and
Binhai Zhu and
Daming Zhu},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {On Sorting by Flanked Transpositions},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {292--311},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_23},
doi = {10.1007/978-981-99-7074-2\_23},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/XuTJWZZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YangLZHZ23,
author = {Zhidong Yang and
Hongjia Li and
Dawei Zang and
Renmin Han and
Fa Zhang},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {SaID: Simulation-Aware Image Denoising Pre-trained Model for Cryo-EM
Micrographs},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {325--336},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_25},
doi = {10.1007/978-981-99-7074-2\_25},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/YangLZHZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZamanB23,
author = {Sumaira Zaman and
Mukul S. Bansal},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Reducing the Impact of Domain Rearrangement on Sequence Alignment
and Phylogeny Reconstruction},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {337--350},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_26},
doi = {10.1007/978-981-99-7074-2\_26},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZamanB23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhangHJXW23,
author = {Jingjing Zhang and
Md. Tofazzal Hossain and
Zhen Ju and
Wenhui Xi and
Yanjie Wei},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Identification and Functional Annotation of circRNAs in Neuroblastoma
Based on Bioinformatics},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {351--363},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_27},
doi = {10.1007/978-981-99-7074-2\_27},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhangHJXW23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhangLTZ23,
author = {Yan Zhang and
Xin Liu and
Panrui Tang and
Zuping Zhang},
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {{SGMDD:} Subgraph Neural Network-Based Model for Analyzing Functional
Connectivity Signatures of Major Depressive Disorder},
booktitle = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
pages = {364--375},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2\_28},
doi = {10.1007/978-981-99-7074-2\_28},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhangLTZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2023,
editor = {Xuan Guo and
Serghei Mangul and
Murray Patterson and
Alexander Zelikovsky},
title = {Bioinformatics Research and Applications - 19th International Symposium,
{ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14248},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-981-99-7074-2},
doi = {10.1007/978-981-99-7074-2},
isbn = {978-981-99-7073-5},
timestamp = {Tue, 10 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/2023.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AlexandrinoOJFD22,
author = {Alexsandro Oliveira Alexandrino and
Andre Rodrigues Oliveira and
G{\'{e}}raldine Jean and
Guillaume Fertin and
Ulisses Dias and
Zanoni Dias},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {Transposition Distance Considering Intergenic Regions for Unbalanced
Genomes},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {100--113},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_10},
doi = {10.1007/978-3-031-23198-8\_10},
timestamp = {Tue, 31 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/AlexandrinoOJFD22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/DengL22,
author = {Juntao Deng and
Min Liu},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {Deep Learning-Enhanced {MHC-II} Presentation Prediction and Peptidome
Deconvolution},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {180--191},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_17},
doi = {10.1007/978-3-031-23198-8\_17},
timestamp = {Sun, 15 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/DengL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GoldenbergSA22,
author = {Meir Goldenberg and
Sagi Snir and
Adi Akavia},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {Private Epigenetic PaceMaker Detector Using Homomorphic Encryption
- Extended Abstract},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {52--61},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_6},
doi = {10.1007/978-3-031-23198-8\_6},
timestamp = {Sun, 15 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/GoldenbergSA22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HuQTZLZ22,
author = {Dongzheng Hu and
Wubin Qu and
Fan Tong and
Xiangwen Zheng and
Jiangyu Li and
Dongsheng Zhao},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {An Efficient and User-Friendly Software for {PCR} Primer Design for
Detection of Highly Variable Bacteria},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {138--147},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_13},
doi = {10.1007/978-3-031-23198-8\_13},
timestamp = {Mon, 09 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/HuQTZLZ22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HuangXWP22,
author = {An Huang and
Xiaolan Xie and
Xiaoqi Wang and
Shaoliang Peng},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {A Multimodal Data Fusion-Based Deep Learning Approach for Drug-Drug
Interaction Prediction},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {275--285},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_25},
doi = {10.1007/978-3-031-23198-8\_25},
timestamp = {Mon, 09 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/HuangXWP22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/JuyalHNGZ22,
author = {Akshay Juyal and
Roya Hosseini and
Daniel Novikov and
Mark Grinshpon and
Alex Zelikovsky},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {Entropy Based Clustering of Viral Sequences},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {369--380},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_33},
doi = {10.1007/978-3-031-23198-8\_33},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/JuyalHNGZ22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiLSLL22,
author = {Han Li and
Feng Li and
Junliang Shang and
Xikui Liu and
Yan Li},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {A Network-Based Voting Method for Identification and Prioritization
of Personalized Cancer Driver Genes},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {148--158},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_14},
doi = {10.1007/978-3-031-23198-8\_14},
timestamp = {Sun, 15 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LiLSLL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiZLWL22,
author = {Xiaobo Li and
Yijia Zhang and
Xingwang Li and
Jian Wang and
Mingyu Lu},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {{NIDN:} Medical Code Assignment via Note-Code Interaction Denoising
Network},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {62--74},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_7},
doi = {10.1007/978-3-031-23198-8\_7},
timestamp = {Sun, 16 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiZLWL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiuDGYW22,
author = {Shuyue Liu and
Junwen Duan and
Feng Gong and
Hailin Yue and
Jianxin Wang},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {Fusing Label Relations for Chinese {EMR} Named Entity Recognition
with Machine Reading Comprehension},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {41--51},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_5},
doi = {10.1007/978-3-031-23198-8\_5},
timestamp = {Tue, 17 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiuDGYW22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiuDSL22,
author = {Jingyi Liu and
I. Duan and
Santi Santichaivekin and
Ran Libeskind{-}Hadas},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {Distance Profiles of Optimal {RNA} Foldings},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {315--329},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_29},
doi = {10.1007/978-3-031-23198-8\_29},
timestamp = {Mon, 09 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LiuDSL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiuZYCL22,
author = {Da Liu and
Yi{-}Jia Zhang and
Ming Yang and
Fei Chen and
Mingyu Lu},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {Gaussian-Enhanced Representation Model for Extracting Protein-Protein
Interactions Affected by Mutations},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {303--314},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_28},
doi = {10.1007/978-3-031-23198-8\_28},
timestamp = {Mon, 09 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LiuZYCL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MwanikiP22,
author = {Njagi Moses Mwaniki and
Nadia Pisanti},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {Optimal Sequence Alignment to ED-Strings},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {204--216},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_19},
doi = {10.1007/978-3-031-23198-8\_19},
timestamp = {Mon, 09 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/MwanikiP22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/PandaPR22,
author = {Abhinandan Panda and
Srinivas Pinisetty and
Partha S. Roop},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {Policy-Based Hypertension Monitoring Using Formal Runtime Verification
Monitors},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {169--179},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_16},
doi = {10.1007/978-3-031-23198-8\_16},
timestamp = {Mon, 09 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/PandaPR22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/QiaoYSL22,
author = {Qian Qiao and
Shasha Yuan and
Junliang Shang and
Jin{-}Xing Liu},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {A Tensor Robust Model Based on Enhanced Tensor Nuclear Norm and Low-Rank
Constraint for Multi-view Cancer Genomics Data},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {381--388},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_34},
doi = {10.1007/978-3-031-23198-8\_34},
timestamp = {Mon, 09 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/QiaoYSL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ShenGLGL22,
author = {Yi Shen and
Ying{-}Lian Gao and
Shu{-}Zhen Li and
Boxin Guan and
Jin{-}Xing Liu},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {A Locality-Constrained Linear Coding-Based Ensemble Learning Framework
for Predicting Potentially Disease-Associated MiRNAs},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {295--302},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_27},
doi = {10.1007/978-3-031-23198-8\_27},
timestamp = {Mon, 09 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ShenGLGL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ShengYHD22,
author = {Yu Sheng and
Shengyi Yang and
Huirong Hu and
Guihua Duan},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {Research on the Prediction Method of Disease Classification Based
on Imaging Features},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {75--87},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_8},
doi = {10.1007/978-3-031-23198-8\_8},
timestamp = {Mon, 09 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ShengYHD22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SrivatsaLS22,
author = {Arjun Srivatsa and
Haoyun Lei and
Russell Schwartz},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {A Clonal Evolution Simulator for Planning Somatic Evolution Studies},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {229--242},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_21},
doi = {10.1007/978-3-031-23198-8\_21},
timestamp = {Mon, 09 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/SrivatsaLS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/TamazianKKPANKP22,
author = {Gaik Tamazian and
Andrey B. Komissarov and
Dmitry Kobak and
Dmitry Polyakov and
Evgeny Andronov and
Sergei Nechaev and
Sergey Kryzhevich and
Yuri Porozov and
Eugene Stepanov},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {t-SNE Highlights Phylogenetic and Temporal Patterns of SARS-CoV-2
Spike and Nucleocapsid Protein Evolution},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {255--262},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_23},
doi = {10.1007/978-3-031-23198-8\_23},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/TamazianKKPANKP22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangGWSL22,
author = {Ying Wang and
Ying{-}Lian Gao and
Juan Wang and
Junliang Shang and
Jin{-}Xing Liu},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {{MLMVFE:} {A} Machine Learning Approach Based on Muli-view Features
Extraction for Drug-Disease Associations Prediction},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {1--8},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_1},
doi = {10.1007/978-3-031-23198-8\_1},
timestamp = {Mon, 09 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/WangGWSL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangLMPW22,
author = {Zhichao Wang and
Xuelei Li and
Jintao Meng and
Yi Pan and
Yanjie Wei},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {Simulating Spiking Neural Networks Based on SW26010pro},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {356--368},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_32},
doi = {10.1007/978-3-031-23198-8\_32},
timestamp = {Mon, 09 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/WangLMPW22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangLSDZW22,
author = {Zhen{-}Chang Wang and
Jin{-}Xing Liu and
Junliang Shang and
Ling{-}Yun Dai and
Chun{-}Hou Zheng and
Juan Wang},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {{ARGLRR:} An Adjusted Random Walk Graph Regularization Sparse Low-Rank
Representation Method for Single-Cell RNA-Sequencing Data Clustering},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {126--137},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_12},
doi = {10.1007/978-3-031-23198-8\_12},
timestamp = {Mon, 09 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/WangLSDZW22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangW22,
author = {Lei Wang and
Yan Wang},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {GNN-Dom: An Unsupervised Method for Protein Domain Partition via Protein
Contact Map},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {286--294},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_26},
doi = {10.1007/978-3-031-23198-8\_26},
timestamp = {Mon, 01 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WangW22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/XiaoWLP22,
author = {Xia Xiao and
Xiaoqi Wang and
Shengyun Liu and
Shaoliang Peng},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {{MPCDDI:} {A} Secure Multiparty Computation-Based Deep Learning Framework
for Drug-Drug Interaction Predictions},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {263--274},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_24},
doi = {10.1007/978-3-031-23198-8\_24},
timestamp = {Mon, 09 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/XiaoWLP22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/XingLCZZ22,
author = {Tian{-}Yi Xing and
Xiao{-}Xin Li and
Zhi{-}Jie Chen and
Xi{-}Yu Zheng and
Fan Zhang},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {Effectively Training {MRI} Reconstruction Network via Sequentially
Using Undersampled k-Space Data with Very Low Frequency Gaps},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {30--40},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_4},
doi = {10.1007/978-3-031-23198-8\_4},
timestamp = {Mon, 09 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/XingLCZZ22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/XuOGGZHG22,
author = {Zhenda Xu and
Jiazi Ouyang and
Qiang Gao and
Aiqian Gan and
Qihua Zhou and
Jiahao Hu and
Song Guo},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {2D Photogrammetry Image of Adolescent Idiopathic Scoliosis Screening
Using Deep Learning},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {330--342},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_30},
doi = {10.1007/978-3-031-23198-8\_30},
timestamp = {Sun, 15 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/XuOGGZHG22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YangZYDZC22,
author = {Bokai Yang and
Ying Nan Zuo and
Shunxiang Yang and
Genqiang Deng and
Suisong Zhu and
Yunpeng Cai},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {M-US-EMRs: {A} Multi-modal Data Fusion Method of Ultrasonic Images
and Electronic Medical Records Used for Screening of Coronary Heart
Disease},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {88--99},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_9},
doi = {10.1007/978-3-031-23198-8\_9},
timestamp = {Mon, 09 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/YangZYDZC22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YordanovDGKW22,
author = {Boyan Yordanov and
Sara{-}Jane Dunn and
Colin Gravill and
Hillel Kugler and
Christoph M. Wintersteiger},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {An SMT-Based Framework for Reasoning About Discrete Biological Models},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {114--125},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_11},
doi = {10.1007/978-3-031-23198-8\_11},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/YordanovDGKW22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YuDJW22,
author = {Ying Yu and
Junwen Duan and
Han Jiang and
Jian{-}Xin Wang},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {Automatic {ICD} Coding Based on Multi-granularity Feature Fusion},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {19--29},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_3},
doi = {10.1007/978-3-031-23198-8\_3},
timestamp = {Mon, 09 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/YuDJW22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhangXLDRCW22,
author = {Haodi Zhang and
Chenyu Xu and
Peirou Liang and
Ke Duan and
Hao Ren and
Weibin Cheng and
Kaishun Wu},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {{MMLN:} Leveraging Domain Knowledge for Multimodal Diagnosis},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {192--203},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_18},
doi = {10.1007/978-3-031-23198-8\_18},
timestamp = {Mon, 09 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ZhangXLDRCW22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhangXLP22,
author = {Xinglong Zhang and
Peng Xi and
Wenjuan Liu and
Shaoliang Peng},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {EMRShareChain: {A} Privacy-Preserving {EMR} Sharing System Model Based
on the Consortium Blockchain},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {343--355},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_31},
doi = {10.1007/978-3-031-23198-8\_31},
timestamp = {Mon, 09 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ZhangXLP22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhongCQWXZ22,
author = {Jiancheng Zhong and
Pan Cui and
Zuohang Qu and
Liuping Wang and
Qiu Xiao and
Yihong Zhu},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {Prediction of Drug-Disease Relationship on Heterogeneous Networks
Based on Graph Convolution},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {243--254},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_22},
doi = {10.1007/978-3-031-23198-8\_22},
timestamp = {Mon, 09 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ZhongCQWXZ22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhouZCPL22,
author = {Peixuan Zhou and
Yi{-}Jia Zhang and
Fei Chen and
Kuo Pang and
Mingyu Lu},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {Heterogeneous {PPI} Network Representation Learning for Protein Complex
Identification},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {217--228},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_20},
doi = {10.1007/978-3-031-23198-8\_20},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhouZCPL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhuPLMP22,
author = {Xiaoshu Zhu and
Liyuan Pang and
Wei Lan and
Shuang Meng and
Xiaoqing Peng},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {STgcor: {A} Distribution-Based Correlation Measurement Method for
Spatial Transcriptome Data},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {9--18},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_2},
doi = {10.1007/978-3-031-23198-8\_2},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhuPLMP22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZouSLWLS22,
author = {Qi Zou and
Yan Sun and
Feng Li and
Juan Wang and
Jin{-}Xing Liu and
Junliang Shang},
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {{TDCOSR:} {A} Multimodality Fusion Framework for Association Analysis
Between Genes and ROIs of Alzheimer's Disease},
booktitle = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
pages = {159--168},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8\_15},
doi = {10.1007/978-3-031-23198-8\_15},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZouSLWLS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2022,
editor = {Mukul S. Bansal and
Zhipeng Cai and
Serghei Mangul},
title = {Bioinformatics Research and Applications - 18th International Symposium,
{ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13760},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23198-8},
doi = {10.1007/978-3-031-23198-8},
isbn = {978-3-031-23197-1},
timestamp = {Mon, 09 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/2022.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/0003OZHD21,
author = {Jiang Xie and
Jiaming Ouyang and
Chang Zhao and
Hongjian He and
Xin Dong},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {A Deep Learning Approach Based on Feature Reconstruction and Multi-dimensional
Attention Mechanism for Drug-Drug Interaction Prediction},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {400--410},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_34},
doi = {10.1007/978-3-030-91415-8\_34},
timestamp = {Fri, 19 Nov 2021 15:46:37 +0100},
biburl = {https://dblp.org/rec/conf/isbra/0003OZHD21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/0004SLSFCZCMHS21,
author = {Zehua Guo and
Kai Su and
Liangjie Liu and
Xianbin Su and
Mofan Feng and
Song Cao and
Mingxuan Zhang and
Runqiu Chi and
Luming Meng and
Guang He and
Yi Shi},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Improving Protein-protein Interaction Prediction by Incorporating
3D Genome Information},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {511--520},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_43},
doi = {10.1007/978-3-030-91415-8\_43},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/0004SLSFCZCMHS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AliSUZPK21,
author = {Sarwan Ali and
Bikram Sahoo and
Naimat Ullah and
Alexander Zelikovskiy and
Murray Patterson and
Imdadullah Khan},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {A k-mer Based Approach for SARS-CoV-2 Variant Identification},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {153--164},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_14},
doi = {10.1007/978-3-030-91415-8\_14},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AliSUZPK21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ArcamoneT021,
author = {Francesco Arcamone and
Yanlun Tu and
Yang Yang},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Prediction of Protein Subcellular Localization from Microscopic Images
via Few-Shot Learning},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {241--253},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_21},
doi = {10.1007/978-3-030-91415-8\_21},
timestamp = {Fri, 19 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ArcamoneT021.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BaiZZL21,
author = {Tian Bai and
Zhenting Zhang and
Chen Zhao and
Xiao Luo},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {A Novel Pseudo-Labeling Approach for Cell Detection Based on Adaptive
Threshold},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {254--265},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_22},
doi = {10.1007/978-3-030-91415-8\_22},
timestamp = {Tue, 03 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BaiZZL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BianL0SLLCCL21,
author = {Xuesheng Bian and
Gang Li and
Cheng Wang and
Siqi Shen and
Weiquan Liu and
Xiuhong Lin and
Zexin Chen and
Mancheung Cheung and
Xi{\'{o}}ngbiao Lu{\'{o}}},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {OrgaNet: {A} Deep Learning Approach for Automated Evaluation of Organoids
Viability in Drug Screening},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {411--423},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_35},
doi = {10.1007/978-3-030-91415-8\_35},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/BianL0SLLCCL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/CavattoniC21,
author = {Margherita Cavattoni and
Matteo Comin},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Boosting Metagenomic Classification with Reads Overlap Graphs},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {521--533},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_44},
doi = {10.1007/978-3-030-91415-8\_44},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/CavattoniC21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChePDWL21,
author = {Zicheng Che and
Wei Peng and
Wei Dai and
Shoulin Wei and
Wei Lan},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {A Heterogeneous Graph Convolutional Network-Based Deep Learning Model
to Identify miRNA-Disease Association},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {130--141},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_12},
doi = {10.1007/978-3-030-91415-8\_12},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ChePDWL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Chen0J21,
author = {Ming Chen and
Yi Pan and
Chunyan Ji},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Predicting Drug Drug Interactions by Signed Graph Filtering-Based
Convolutional Networks},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {375--387},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_32},
doi = {10.1007/978-3-030-91415-8\_32},
timestamp = {Fri, 19 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/Chen0J21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChengZXL21,
author = {Jianhong Cheng and
Qichang Zhao and
Lei Xu and
Jin Liu},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {A New Deep Learning Training Scheme: Application to Biomedical Data},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {451--459},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_38},
doi = {10.1007/978-3-030-91415-8\_38},
timestamp = {Tue, 10 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ChengZXL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChuKLWYD21,
author = {He{-}Ming Chu and
Xiang{-}Zhen Kong and
Jin{-}Xing Liu and
Juan Wang and
Shasha Yuan and
Ling{-}Yun Dai},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Joint {CC} and Bimax: {A} Biclustering Method for Single-Cell RNA-Seq
Data Analysis},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {499--510},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_42},
doi = {10.1007/978-3-030-91415-8\_42},
timestamp = {Fri, 22 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ChuKLWYD21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/CuiXP21,
author = {Yonghui Cui and
Zhijian Xu and
Shaoliang Peng},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {{IDOS:} Improved {D3DOCK} on Spark},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {436--447},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_37},
doi = {10.1007/978-3-030-91415-8\_37},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/CuiXP21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/DaiZHYF21,
author = {Yidan Dai and
Yuanyuan Zhuo and
Xingxian Huang and
Haibo Yu and
Xiaomao Fan},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {A Novel Prediction Framework for Two-Year Stroke Recurrence Using
Retinal Images},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {279--288},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_24},
doi = {10.1007/978-3-030-91415-8\_24},
timestamp = {Fri, 19 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/DaiZHYF21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/DaiZLFWZ21,
author = {Zhongyang Dai and
Haishan Zhang and
Feifei Lin and
Shengzhong Feng and
Yanjie Wei and
Jiaxiu Zhou},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {The Classification System and Biomarkers for Autism Spectrum Disorder:
{A} Machine Learning Approach},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {289--299},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_25},
doi = {10.1007/978-3-030-91415-8\_25},
timestamp = {Fri, 19 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/DaiZLFWZ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GaoYLS021,
author = {Ying{-}Lian Gao and
Meng{-}Meng Yin and
Jin{-}Xing Liu and
Junliang Shang and
Chun{-}Hou Zheng},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {{MKL-LP:} Predicting Disease-Associated Microbes with Multiple-Similarity
Kernel Learning-Based Label Propagation},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {3--10},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_1},
doi = {10.1007/978-3-030-91415-8\_1},
timestamp = {Wed, 15 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/GaoYLS021.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GeLFJZX0W21,
author = {Ruiquan Ge and
Yizhang Luo and
Guanwen Feng and
Gangyong Jia and
Hua Zhang and
Chong Xu and
Gang Xu and
Pu Wang},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {SuccSPred: Succinylation Sites Prediction Using Fused Feature Representation
and Ranking Method},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {191--202},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_17},
doi = {10.1007/978-3-030-91415-8\_17},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GeLFJZX0W21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GuWPZ21,
author = {Yunchao Gu and
Xinliang Wang and
Junjun Pan and
Zhong Zhou},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Diabetic Retinopathy Grading Base on Contrastive Learning and Semi-supervised
Learning},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {68--79},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_7},
doi = {10.1007/978-3-030-91415-8\_7},
timestamp = {Fri, 19 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/GuWPZ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GuanXLWA21,
author = {Yuxia Guan and
Jinrui Xu and
Ning Liu and
Jianxin Wang and
Ying An},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {{ECG} Arrhythmia Detection Based on Hidden Attention Residual Neural
Network},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {471--483},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_40},
doi = {10.1007/978-3-030-91415-8\_40},
timestamp = {Wed, 27 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GuanXLWA21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/JingLWZ21,
author = {Ming Jing and
Yunjing Liu and
Xiaoxiao Wang and
Li Zhang},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {StarLace: Nested Visualization of Temporal Brain Connectivity Data},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {348--359},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_30},
doi = {10.1007/978-3-030-91415-8\_30},
timestamp = {Wed, 19 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/JingLWZ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/JuZMZLFPLW21,
author = {Zhen Ju and
Huiling Zhang and
Jingtao Meng and
Jingjing Zhang and
Xuelei Li and
Jianping Fan and
Yi Pan and
Weiguo Liu and
Yanjie Wei},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {An Efficient Greedy Incremental Sequence Clustering Algorithm},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {596--607},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_50},
doi = {10.1007/978-3-030-91415-8\_50},
timestamp = {Fri, 29 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/JuZMZLFPLW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/KnyazevNGSASHBS21,
author = {Sergey Knyazev and
Daniel Novikov and
Mark Grinshpon and
Harman Singh and
Ram Ayyala and
Varuni Sarwal and
Roya Hosseini and
Pelin Icer Baykal and
Pavel Skums and
Ellsworth Campbell and
Serghei Mangul and
Alex Zelikovsky},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {A Novel Network Representation of SARS-CoV-2 Sequencing Data},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {165--175},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_15},
doi = {10.1007/978-3-030-91415-8\_15},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/KnyazevNGSASHBS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LeeKLS021,
author = {Hunmin Lee and
Mingon Kang and
Yingshu Li and
Daehee Seo and
Donghyun Kim},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Epidemic Vulnerability Index for Effective Vaccine Distribution Against
Pandemic},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {22--34},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_3},
doi = {10.1007/978-3-030-91415-8\_3},
timestamp = {Fri, 19 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LeeKLS021.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiCG0021,
author = {Hongjia Li and
Ge Chen and
Shan Gao and
Jintao Li and
Fa Zhang},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {PickerOptimizer: {A} Deep Learning-Based Particle Optimizer for Cryo-Electron
Microscopy Particle-Picking Algorithms},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {549--560},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_46},
doi = {10.1007/978-3-030-91415-8\_46},
timestamp = {Fri, 19 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LiCG0021.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiH21,
author = {Jiyun Li and
Peng Huang},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Task-Oriented Feature Representation for Spontaneous Speech of {AD}
Patients},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {46--57},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_5},
doi = {10.1007/978-3-030-91415-8\_5},
timestamp = {Wed, 15 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LiH21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiWG21,
author = {Wen Li and
Shulin Wang and
Hu Guo},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {{LPI-FKLGCN:} Predicting LncRNA-Protein Interactions Through Fast
Kernel Learning and Graph Convolutional Network},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {227--238},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_20},
doi = {10.1007/978-3-030-91415-8\_20},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LiWG21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiZCL21,
author = {Jing Li and
Shangping Zhong and
Kaizhi Chen and
Taibiao Li},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {SkeIn: Sketchy-Intensive Reading Comprehension Model for Multi-choice
Biomedical Questions},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {561--571},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_47},
doi = {10.1007/978-3-030-91415-8\_47},
timestamp = {Fri, 19 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LiZCL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LinZXNTQ21,
author = {Shuting Lin and
Jie Zhou and
Yiqiong Xiao and
Bridget Neary and
Yong Teng and
Peng Qiu},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Identification of Protein Markers Predictive of Drug-Specific Survival
Outcome in Cancers},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {58--67},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_6},
doi = {10.1007/978-3-030-91415-8\_6},
timestamp = {Fri, 19 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LinZXNTQ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiuXZ0P21,
author = {Hao Liu and
Xia Xiao and
Xinglong Zhang and
Kenli Li and
Shaoliang Peng},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {{MIFS:} {A} Peer-to-Peer Medical Images Storage and Sharing System
Based on Consortium Blockchain},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {336--347},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_29},
doi = {10.1007/978-3-030-91415-8\_29},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiuXZ0P21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiuYD0YH21,
author = {Lina Liu and
Shuang Yao and
Zhaoyun Ding and
Maozu Guo and
Donghua Yu and
Keli Hu},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Drug-Target Interaction Prediction Based on Gaussian Interaction Profile
and Information Entropy},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {388--399},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_33},
doi = {10.1007/978-3-030-91415-8\_33},
timestamp = {Wed, 15 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LiuYD0YH21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiuYHWWG21,
author = {Xiangyu Liu and
Chao Yu and
Qikai Huang and
Luhao Wang and
Jianfeng Wu and
Xiangdong Guan},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Combining Model-Based and Model-Free Reinforcement Learning Policies
for More Efficient Sepsis Treatment},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {105--117},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_10},
doi = {10.1007/978-3-030-91415-8\_10},
timestamp = {Thu, 16 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LiuYHWWG21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LuLNZ21,
author = {Shuai Lu and
Yuguang Li and
Xiaofei Nan and
Shoutao Zhang},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {A Sequence-Based Antibody Paratope Prediction Model Through Combing
Local-Global Information and Partner Features},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {179--190},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_16},
doi = {10.1007/978-3-030-91415-8\_16},
timestamp = {Wed, 15 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LuLNZ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Luo21,
author = {Sanbi Luo},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Image to Image Transfer Makes Malpositioned Teeth Orderly},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {324--335},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_28},
doi = {10.1007/978-3-030-91415-8\_28},
timestamp = {Fri, 19 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/Luo21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/PangZWZHWQ21,
author = {Shanchen Pang and
Kuijie Zhang and
Shudong Wang and
Yuanyuan Zhang and
Sicheng He and
Wenhao Wu and
Sibo Qiao},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {{HGDD:} {A} Drug-Disease High-Order Association Information Extraction
Method for Drug Repurposing via Hypergraph},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {424--435},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_36},
doi = {10.1007/978-3-030-91415-8\_36},
timestamp = {Wed, 15 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/PangZWZHWQ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SmithNBBP21,
author = {Brendan Smith and
Cristian Navarro{-}Martinez and
Rebecca Buonopane and
S. Ashley Byun and
Murray Patterson},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Correlated Evolution in the Small Parsimony Framework},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {608--619},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_51},
doi = {10.1007/978-3-030-91415-8\_51},
timestamp = {Wed, 15 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/SmithNBBP21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SongZLSJ21,
author = {Anping Song and
Hongtao Zhu and
Lifang Liu and
Ziheng Song and
Hongyu Jin},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {An Efficient Two-Stage Fusion Network for Computer-Aided Diagnosis
of Diabetic Foot},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {118--129},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_11},
doi = {10.1007/978-3-030-91415-8\_11},
timestamp = {Mon, 22 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/SongZLSJ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangHLJCYF21,
author = {Chen Wang and
Jingzhao Hu and
Ke Liu and
Qiaomei Jia and
Jiayue Chen and
Kun Yang and
Jun Feng},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {EEG-Based Emotion Recognition Fusing Spacial-Frequency Domain Features
and Data-Driven Spectrogram-Like Features},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {460--470},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_39},
doi = {10.1007/978-3-030-91415-8\_39},
timestamp = {Thu, 16 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/WangHLJCYF21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangL021,
author = {Yueyue Wang and
Xiujuan Lei and
Yi Pan},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Predicting Microbe-Disease Association via Tripartite Network and
Relation Graph Convolutional Network},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {92--104},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_9},
doi = {10.1007/978-3-030-91415-8\_9},
timestamp = {Fri, 19 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/WangL021.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangMXL21,
author = {Wenkang Wang and
Xiangmao Meng and
Ju Xiang and
Min Li},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Overlapping Protein Complexes Detection Based on Multi-level Topological
Similarities},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {215--226},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_19},
doi = {10.1007/978-3-030-91415-8\_19},
timestamp = {Tue, 16 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WangMXL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangTLLSLYZ21,
author = {Zixuan Wang and
Xiaoyao Tan and
Beichen Li and
Yuhang Liu and
Qi Shao and
Zijing Li and
Yihan Yang and
Yongqing Zhang},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {BindTransNet: {A} Transferable Transformer-Based Architecture for
Cross-Cell Type DNA-Protein Binding Sites Prediction},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {203--214},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_18},
doi = {10.1007/978-3-030-91415-8\_18},
timestamp = {Fri, 19 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/WangTLLSLYZ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangXTL21,
author = {Yishu Wang and
Lingyun Xu and
Xuehan Tian and
Zhe Lin},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Identification of Gastric Cancer Immune Microenvironment Related Genes
with Poor Prognosis and Tumor Immune Infiltration},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {142--152},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_13},
doi = {10.1007/978-3-030-91415-8\_13},
timestamp = {Wed, 06 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/WangXTL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WeiCWZ021,
author = {Xiangyu Wei and
Meifei Chen and
Manxi Wu and
Xiaowei Zhang and
Bin Hu},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {EEG-Based Depression Detection with a Synthesis-Based Data Augmentation
Strategy},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {484--496},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_41},
doi = {10.1007/978-3-030-91415-8\_41},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WeiCWZ021.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/XinYWP21,
author = {Bin Xin and
Yaning Yang and
Dongqing Wei and
Shaoliang Peng},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {{CFCN:} {A} Multi-scale Fully Convolutional Network with Dilated Convolution
for Nuclei Classification and Localization},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {314--323},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_27},
doi = {10.1007/978-3-030-91415-8\_27},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/XinYWP21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/XuGWWFWW21,
author = {Kele Xu and
Zijian Gao and
Jilong Wang and
Yang Wen and
Ming Feng and
Changjian Wang and
Yin Wang},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Batch Weighted Nuclear-Norm Minimization for Medical Image Sequence
Segmentation},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {360--371},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_31},
doi = {10.1007/978-3-030-91415-8\_31},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/XuGWWFWW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/XuMJQ21,
author = {Congmin Xu and
Quoc D. Mac and
Qiong Jia and
Peng Qiu},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Immune-Microbiota Crosstalk Underlying Inflammatory Bowel Disease},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {11--21},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_2},
doi = {10.1007/978-3-030-91415-8\_2},
timestamp = {Fri, 19 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/XuMJQ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/XuQ21,
author = {Shuying Xu and
Hongyan Quan},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {LiteTrans: Reconstruct Transformer with Convolution for Medical Image
Segmentation},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {300--313},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_26},
doi = {10.1007/978-3-030-91415-8\_26},
timestamp = {Fri, 19 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/XuQ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhangCZSP21,
author = {Jitao Zhang and
Shihong Chen and
Haoling Zhang and
Yue Shen and
Zhi Ping},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {{DNA} Image Storage Using a Scheme Based on Fuzzy Matching on Natural
Genome},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {572--583},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_48},
doi = {10.1007/978-3-030-91415-8\_48},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhangCZSP21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhaoFLJ21,
author = {Qing Zhao and
Renyan Feng and
Jianqiang Li and
Yanhe Jia},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Exploiting Multi-granular Features for the Enhanced Predictive Modeling
of {COPD} Based on Chinese EMRs},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {35--45},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_4},
doi = {10.1007/978-3-030-91415-8\_4},
timestamp = {Fri, 24 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ZhaoFLJ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhaoW21,
author = {Chang Zhao and
Shunfang Wang},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Parameter Transfer Learning Measured by Image Similarity to Detect
{CT} of {COVID-19}},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {266--278},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_23},
doi = {10.1007/978-3-030-91415-8\_23},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ZhaoW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhuDYW21,
author = {Lingzhi Zhu and
Guihua Duan and
Cheng Yan and
Jianxin Wang},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Prediction of Virus-Receptor Interactions Based on Similarity and
Matrix Completion},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {584--595},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_49},
doi = {10.1007/978-3-030-91415-8\_49},
timestamp = {Wed, 27 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhuDYW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhuLLWP21,
author = {Xiaoshu Zhu and
Yongchang Lin and
Jian Li and
Jianxin Wang and
Xiaoqing Peng},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {ScDA: {A} Denoising AutoEncoder Based Dimensionality Reduction for
Single-cell RNA-seq Data},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {534--545},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_45},
doi = {10.1007/978-3-030-91415-8\_45},
timestamp = {Wed, 27 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhuLLWP21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhuZRZLW21,
author = {Jinhao Zhu and
Yinjia Zhang and
Weixiong Rao and
Qinpei Zhao and
Jiangfeng Li and
Congrong Wang},
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Reinforcement Learning for Diabetes Blood Glucose Control with Meal
Information},
booktitle = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
pages = {80--91},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8\_8},
doi = {10.1007/978-3-030-91415-8\_8},
timestamp = {Fri, 26 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ZhuZRZLW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2021,
editor = {Yanjie Wei and
Min Li and
Pavel Skums and
Zhipeng Cai},
title = {Bioinformatics Research and Applications - 17th International Symposium,
{ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13064},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-91415-8},
doi = {10.1007/978-3-030-91415-8},
isbn = {978-3-030-91414-1},
timestamp = {Fri, 19 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/2021.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AlqahtaniM20,
author = {Fahad Alqahtani and
Ion I. Mandoiu},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Mitochondrial Haplogroup Assignment for High-Throughput Sequencing
Data from Single Individual and Mixed {DNA} Samples},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {1--12},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_1},
doi = {10.1007/978-3-030-57821-3\_1},
timestamp = {Wed, 26 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AlqahtaniM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AndrianovNKKBT20,
author = {Alexander M. Andrianov and
Grigory I. Nikolaev and
Yuri V. Kornoushenko and
Anna D. Karpenko and
Ivan P. Bosko and
Alexander V. Tuzikov},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {In Silico-Guided Discovery of Potential {HIV-1} Entry Inhibitors Mimicking
bNAb {N6:} Virtual Screening, Docking, Molecular Dynamics, and Post-Molecular
Modeling Analysis},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {243--249},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_21},
doi = {10.1007/978-3-030-57821-3\_21},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AndrianovNKKBT20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AndrianovNKU20,
author = {Alexander M. Andrianov and
Grigory I. Nikolaev and
Yuri V. Kornoushenko and
Sergei A. Usanov},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {In Silico Design and Evaluation of Novel Triazole-Based Compounds
as Promising Drug Candidates Against Breast Cancer},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {312--318},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_29},
doi = {10.1007/978-3-030-57821-3\_29},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AndrianovNKU20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AnsarifarM0E20,
author = {Javad Ansarifar and
Alexey Markin and
Pawel G{\'{o}}recki and
Oliver Eulenstein},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Integer Linear Programming Formulation for the Unified Duplication-Loss-Coalescence
Model},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {229--242},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_20},
doi = {10.1007/978-3-030-57821-3\_20},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AnsarifarM0E20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BrandesLL20,
author = {Nadav Brandes and
Nathan Linial and
Michal Linial},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Functional Evolutionary Modeling Exposes Overlooked Protein-Coding
Genes Involved in Cancer},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {119--126},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_11},
doi = {10.1007/978-3-030-57821-3\_11},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BrandesLL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BykovSGG20,
author = {Nikolai S. Bykov and
Olga M. Sigalova and
Mikhail S. Gelfand and
Aleksandra A. Galitsyna},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {HiChew: a Tool for {TAD} Clustering in Embryogenesis},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {381--388},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_37},
doi = {10.1007/978-3-030-57821-3\_37},
timestamp = {Wed, 26 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BykovSGG20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/CheloshkinaBP20,
author = {Kseniia Cheloshkina and
Islam Bzhikhatlov and
Maria Poptsova},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Cancer Breakpoint Hotspots Versus Individual Breakpoints Prediction
by Machine Learning Models},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {217--228},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_19},
doi = {10.1007/978-3-030-57821-3\_19},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/CheloshkinaBP20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/DesaiPSW20,
author = {Heta P. Desai and
Anuja P. Parameshwaran and
Rajshekhar Sunderraman and
Michael Weeks},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Deep Ensemble Models for 16S Ribosomal Gene Classification},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {282--290},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_25},
doi = {10.1007/978-3-030-57821-3\_25},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/DesaiPSW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/DharZMB20,
author = {Saurav Dhar and
Chengchen Zhang and
Ion I. Mandoiu and
Mukul S. Bansal},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {TNet: Phylogeny-Based Inference of Disease Transmission Networks Using
Within-Host Strain Diversity},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {203--216},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_18},
doi = {10.1007/978-3-030-57821-3\_18},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/DharZMB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Fernandez-BacaL20,
author = {David Fern{\'{a}}ndez{-}Baca and
Lei Liu},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Testing the Agreement of Trees with Internal Labels},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {127--139},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_12},
doi = {10.1007/978-3-030-57821-3\_12},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Fernandez-BacaL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GaoHZCLXZ20,
author = {Shan Gao and
Renmin Han and
Xiangrui Zeng and
Xuefeng Cui and
Zhiyong Liu and
Min Xu and
Fa Zhang},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Dilated-DenseNet for Macromolecule Classification in Cryo-electron
Tomography},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {82--94},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_8},
doi = {10.1007/978-3-030-57821-3\_8},
timestamp = {Wed, 20 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/GaoHZCLXZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GaoLW20,
author = {Hao Gao and
Min Li and
Fang{-}Xiang Wu},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {{SPOC:} Identification of Drug Targets in Biological Networks via
Set Preference Output Control},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {26--37},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_3},
doi = {10.1007/978-3-030-57821-3\_3},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GaoLW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GuZWSCZ20,
author = {Wenyan Gu and
Aizhong Zhou and
Lusheng Wang and
Shiwei Sun and
Xuefeng Cui and
Daming Zhu},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {{SVLR:} Genome Structure Variant Detection Using Long Read Sequencing
Data},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {140--153},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_13},
doi = {10.1007/978-3-030-57821-3\_13},
timestamp = {Sat, 09 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GuZWSCZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GuoYMW20,
author = {Hongyu Guo and
Wutao Yin and
Sakib Mostafa and
Fang{-}Xiang Wu},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Diagnosis of {ASD} from rs-fMRI Images Based on Brain Dynamic Networks},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {166--177},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_15},
doi = {10.1007/978-3-030-57821-3\_15},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GuoYMW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HadarovichKT20,
author = {Anna Hadarovich and
Alexander Kalinouski and
Alexander V. Tuzikov},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Deep Learning Approach with Rotate-Shift Invariant Input to Predict
Protein Homodimer Structure},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {296--303},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_27},
doi = {10.1007/978-3-030-57821-3\_27},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HadarovichKT20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HellmuthMN20,
author = {Marc Hellmuth and
Daniel Merkle and
Nikolai N{\o}jgaard},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Atom Tracking Using Cayley Graphs},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {406--415},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_41},
doi = {10.1007/978-3-030-57821-3\_41},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/HellmuthMN20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HuangWZY20,
author = {Qiuyue Huang and
Jun Wang and
Xiangliang Zhang and
Guoxian Yu},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Isoform-Disease Association Prediction by Data Fusion},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {44--55},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_5},
doi = {10.1007/978-3-030-57821-3\_5},
timestamp = {Wed, 24 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/HuangWZY20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/KimB20,
author = {Wooyoung Kim and
Zachary Arthur Brader},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {NemoLib: Network Motif Libraries for Network Motif Detection and Analysis},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {327--334},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_31},
doi = {10.1007/978-3-030-57821-3\_31},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/KimB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/KorotkovKK20,
author = {Eugene V. Korotkov and
Anastasya M. Kamionskaya and
Maria A. Korotkova},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Search for Tandem Repeats in the First Chromosome from the Rice Genome},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {291--295},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_26},
doi = {10.1007/978-3-030-57821-3\_26},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/KorotkovKK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiDYWW20,
author = {Na Li and
Guihua Duan and
Cheng Yan and
Fang{-}Xiang Wu and
Jianxin Wang},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {MiRNA-Disease Associations Prediction Based on Negative Sample Selection
and Multi-layer Perceptron},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {178--188},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_16},
doi = {10.1007/978-3-030-57821-3\_16},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiDYWW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiuSPHW20,
author = {Chun{-}Cheng Liu and
Tao{-}Chuan Shih and
Tun{-}Wen Pai and
Chin{-}Hwa Hu and
Lee{-}Jyi Wang},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Enhanced Functional Pathway Annotations for Differentially Expressed
Gene Clusters},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {352--363},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_34},
doi = {10.1007/978-3-030-57821-3\_34},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiuSPHW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LvLY20,
author = {Xingfeng Lv and
Jinbao Li and
Qin Yan},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Automated Detection of Sleep Apnea from Abdominal Respiratory Signal
Using Hilbert-Huang Transform},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {364--371},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_35},
doi = {10.1007/978-3-030-57821-3\_35},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LvLY20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MoussaM20,
author = {Marmar Moussa and
Ion I. Mandoiu},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {{SC1:} {A} Tool for Interactive Web-Based Single Cell RNA-Seq Data
Analysis},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {389--397},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_39},
doi = {10.1007/978-3-030-57821-3\_39},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MoussaM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MyasnikovaSS20,
author = {Ekaterina M. Myasnikova and
Victoria Yu. Samuta and
Alexander V. Spirov},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Quantitative Analysis of the Dynamics of Maternal Gradients in the
Early Drosophila Embryo},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {398--405},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_40},
doi = {10.1007/978-3-030-57821-3\_40},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MyasnikovaSS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/NikolaevSATA20,
author = {Grigory I. Nikolaev and
Nikita A. Shuldov and
Arseny I. Anischenko and
Alexander V. Tuzikov and
Alexander M. Andrianov},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Development of a Neural Network-Based Approach for Prediction of Potential
{HIV-1} Entry Inhibitors Using Deep Learning and Molecular Modeling
Methods},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {304--311},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_28},
doi = {10.1007/978-3-030-57821-3\_28},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/NikolaevSATA20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ParviniBF20,
author = {Ghazaleh Parvini and
Katherine Braught and
David Fern{\'{a}}ndez{-}Baca},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Checking Phylogenetic Decisiveness in Theory and in Practice},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {189--202},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_17},
doi = {10.1007/978-3-030-57821-3\_17},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ParviniBF20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/PetukhovaGSM20,
author = {D. A. Petukhova and
E. E. Gurinova and
A. L. Sukhomyasova and
N. R. Maksimova},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Identification of a Novel Compound Heterozygous Variant in {NBAS}
Causing Bone Fragility by the Type of Osteogenesis Imperfecta},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {38--43},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_4},
doi = {10.1007/978-3-030-57821-3\_4},
timestamp = {Wed, 26 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/PetukhovaGSM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/RondelHSKMSMPZ20,
author = {Filipp Rondel and
Akram Sadat Hosseini and
Bikram Sahoo and
Sergey Knyazev and
Igor Mandric and
Frank Stewart and
Ion I. Mandoiu and
Bogdan Pasaniuc and
Alex Zelikovsky},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Estimating Enzyme Participation in Metabolic Pathways for Microbial
Communities from RNA-seq Data},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {335--343},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_32},
doi = {10.1007/978-3-030-57821-3\_32},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/RondelHSKMSMPZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SolovevOTDAPSP20,
author = {Yaroslav V. Solovev and
Daria S. Ostroverkhova and
Gaik Tamazian and
Anton V. Domnin and
Anastasya A. Anashkina and
Irina Yu. Petrushanko and
Eugene O. Stepanov and
Yuri B. Porozov},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Na/K-ATPase Glutathionylation: in silico Modeling of Reaction Mechanisms},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {372--380},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_36},
doi = {10.1007/978-3-030-57821-3\_36},
timestamp = {Wed, 26 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SolovevOTDAPSP20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/StoratoC20,
author = {Davide Storato and
Matteo Comin},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Improving Metagenomic Classification Using Discriminative k-mers from
Sequencing Data},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {68--81},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_7},
doi = {10.1007/978-3-030-57821-3\_7},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/StoratoC20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/TinkovPGP20,
author = {Oleg Tinkov and
Pavel G. Polishchuk and
Veniamin Yu. Grigor'ev and
Yuri Porozov},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {The Cross-Interpretation of {QSAR} Toxicological Models},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {262--273},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_23},
doi = {10.1007/978-3-030-57821-3\_23},
timestamp = {Wed, 30 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/TinkovPGP20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangJCG20,
author = {Sai Wang and
Caiyan Jia and
Zhineng Chen and
Xieping Gao},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Signet Ring Cell Detection with Classification Reinforcement Detection
Network},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {13--25},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_2},
doi = {10.1007/978-3-030-57821-3\_2},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WangJCG20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangK20,
author = {Yangxiao Wang and
Wooyoung Kim},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Identification of Essential Genes with NemoProfile and Various Machine
Learning Models},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {319--326},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_30},
doi = {10.1007/978-3-030-57821-3\_30},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WangK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangZZLL20,
author = {Nian Wang and
Min Zeng and
Jiashuai Zhang and
Yiming Li and
Min Li},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Ess-NEXG: Predict Essential Proteins by Constructing a Weighted Protein
Interaction Network Based on Node Embedding and XGBoost},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {95--104},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_9},
doi = {10.1007/978-3-030-57821-3\_9},
timestamp = {Mon, 09 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/WangZZLL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WuYLW20,
author = {Gaoyan Wu and
Mengyun Yang and
Yaohang Li and
Jianxin Wang},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {De novo Prediction of Drug-Target Interaction via Laplacian Regularized
Schatten-p Norm Minimization},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {154--165},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_14},
doi = {10.1007/978-3-030-57821-3\_14},
timestamp = {Fri, 21 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WuYLW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/XiePLTZ20,
author = {Yuan Xie and
Yulong Pei and
Yun Lu and
Haixu Tang and
Yuan Zhou},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Learning Structural Genetic Information via Graph Neural Embedding},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {250--261},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_22},
doi = {10.1007/978-3-030-57821-3\_22},
timestamp = {Wed, 16 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/XiePLTZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Yang020,
author = {Wen Yang and
Lusheng Wang},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {mapAlign: An Efficient Approach for Mapping and Aligning Long Reads
to Reference Genomes},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {105--118},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_10},
doi = {10.1007/978-3-030-57821-3\_10},
timestamp = {Wed, 26 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Yang020.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YukaY20,
author = {Selcen Ari Yuka and
Alper Yilmaz},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {A New Network-Based Tool to Analyse Competing Endogenous RNAs},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {274--281},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_24},
doi = {10.1007/978-3-030-57821-3\_24},
timestamp = {Wed, 26 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/YukaY20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhangYRGW20,
author = {Huiling Zhang and
Guoxian Yu and
Wei Ren and
Maozu Guo and
Jun Wang},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {EpIntMC: Detecting Epistatic Interactions Using Multiple Clusterings},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {56--67},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_6},
doi = {10.1007/978-3-030-57821-3\_6},
timestamp = {Wed, 20 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ZhangYRGW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhuYD20,
author = {Lingzhi Zhu and
Cheng Yan and
Guihua Duan},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Identification of Virus-Receptor Interactions Based on Network Enhancement
and Similarity},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {344--351},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_33},
doi = {10.1007/978-3-030-57821-3\_33},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhuYD20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2020,
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3},
doi = {10.1007/978-3-030-57821-3},
isbn = {978-3-030-57820-6},
timestamp = {Fri, 21 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/2020.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AcharyaCP19,
author = {Sudipta Acharya and
Laizhong Cui and
Yi Pan},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {Automated Hub-Protein Detection via a New Fused Similarity Measure-Based
Multi-objective Clustering Framework},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {138--145},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_12},
doi = {10.1007/978-3-030-20242-2\_12},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AcharyaCP19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AndersenMR19,
author = {Jakob L. Andersen and
Daniel Merkle and
Peter S. Rasmussen},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {Graph Transformations, Semigroups, and Isotopic Labeling},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {196--207},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_17},
doi = {10.1007/978-3-030-20242-2\_17},
timestamp = {Mon, 27 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AndersenMR19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BritoJFODD19,
author = {Klairton Lima Brito and
G{\'{e}}raldine Jean and
Guillaume Fertin and
Andre Rodrigues Oliveira and
Ulisses Dias and
Zanoni Dias},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {Sorting by Reversals, Transpositions, and Indels on Both Gene Order
and Intergenic Sizes},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {28--39},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_3},
doi = {10.1007/978-3-030-20242-2\_3},
timestamp = {Fri, 31 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BritoJFODD19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BrunerS19,
author = {Ariel Bruner and
Roded Sharan},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {A Robustness Analysis of Dynamic Boolean Models of Cellular Circuits},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {183--195},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_16},
doi = {10.1007/978-3-030-20242-2\_16},
timestamp = {Mon, 27 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BrunerS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChenULW19,
author = {Zhi{-}Zhong Chen and
Shohei Ueta and
Jingyu Li and
Lusheng Wang},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {Computing a Consensus Phylogeny via Leaf Removal},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {3--15},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_1},
doi = {10.1007/978-3-030-20242-2\_1},
timestamp = {Mon, 10 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ChenULW19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/DaiCPZL19,
author = {Wei Dai and
Qi Chang and
Wei Peng and
Jiancheng Zhong and
Yongjiang Li},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {Identifying Human Essential Genes by Network Embedding Protein-Protein
Interaction Network},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {127--137},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_11},
doi = {10.1007/978-3-030-20242-2\_11},
timestamp = {Tue, 18 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/DaiCPZL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/DaiLPSZW19,
author = {Wei Dai and
Xia Li and
Wei Peng and
Jurong Song and
Jiancheng Zhong and
Jianxin Wang},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {Improving Identification of Essential Proteins by a Novel Ensemble
Method},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {146--155},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_13},
doi = {10.1007/978-3-030-20242-2\_13},
timestamp = {Fri, 21 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/DaiLPSZW19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/DuON19,
author = {Peng Du and
Huw A. Ogilvie and
Luay Nakhleh},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {Unifying Gene Duplication, Loss, and Coalescence on Phylogenetic Networks},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {40--51},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_4},
doi = {10.1007/978-3-030-20242-2\_4},
timestamp = {Mon, 27 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/DuON19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/FiosinaFB19,
author = {Jelena Fiosina and
Maksims Fiosins and
Stefan Bonn},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {Deep Learning and Random Forest-Based Augmentation of sRNA Expression
Profiles},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {159--170},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_14},
doi = {10.1007/978-3-030-20242-2\_14},
timestamp = {Mon, 27 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/FiosinaFB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GouveiaLM19,
author = {Filipe Gouveia and
In{\^{e}}s Lynce and
Pedro T. Monteiro},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {Model Revision of Boolean Regulatory Networks at Stable State},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {100--112},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_9},
doi = {10.1007/978-3-030-20242-2\_9},
timestamp = {Thu, 04 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GouveiaLM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HaoMOK19,
author = {Jie Hao and
Mohammad Masum and
Jung Hun Oh and
Mingon Kang},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {Gene- and Pathway-Based Deep Neural Network for Multi-omics Data Integration
to Predict Cancer Survival Outcomes},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {113--124},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_10},
doi = {10.1007/978-3-030-20242-2\_10},
timestamp = {Fri, 31 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HaoMOK19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HeL19,
author = {Zaobo He and
Jianqiang Li},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {Modeling SNP-Trait Associations and Realizing Privacy-Utility Tradeoff
in Genomic Data Publishing},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {65--72},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_6},
doi = {10.1007/978-3-030-20242-2\_6},
timestamp = {Fri, 03 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/HeL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiB19,
author = {Lei Li and
Mukul S. Bansal},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {Simultaneous Multi-Domain-Multi-Gene Reconciliation Under the Domain-Gene-Species
Reconciliation Model},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {73--86},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_7},
doi = {10.1007/978-3-030-20242-2\_7},
timestamp = {Tue, 28 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiuJLZZ19,
author = {Lixin Liu and
Haitao Jiang and
Peiqiang Liu and
Binhai Zhu and
Daming Zhu},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {Maximum Stacking Base Pairs: Hardness and Approximation by Nonlinear
LP-Rounding},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {244--256},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_21},
doi = {10.1007/978-3-030-20242-2\_21},
timestamp = {Mon, 27 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiuJLZZ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MoonE19,
author = {Jucheol Moon and
Oliver Eulenstein},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {The Cluster Affinity Distance for Phylogenies},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {52--64},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_5},
doi = {10.1007/978-3-030-20242-2\_5},
timestamp = {Mon, 27 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MoonE19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/PetrucciNPC19,
author = {Enrico Petrucci and
Laurent No{\'{e}} and
Cinzia Pizzi and
Matteo Comin},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {Iterative Spaced Seed Hashing: Closing the Gap Between Spaced Seed
Hashing and k-mer Hashing},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {208--219},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_18},
doi = {10.1007/978-3-030-20242-2\_18},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/PetrucciNPC19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Snir19,
author = {Sagi Snir},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {Greedy Partition Distance Under Stochastic Models - Analytic Results},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {257--269},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_22},
doi = {10.1007/978-3-030-20242-2\_22},
timestamp = {Mon, 27 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Snir19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangZLLWZ19,
author = {Zihao Wang and
Jingrong Zhang and
Xintong Liu and
Zhiyong Liu and
Xiaohua Wan and
Fa Zhang},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {{DM-SIRT:} {A} Distributed Method for Multi-tilt Reconstruction in
Electron Tomography},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {220--231},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_19},
doi = {10.1007/978-3-030-20242-2\_19},
timestamp = {Thu, 19 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/WangZLLWZ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WimberleyH19,
author = {Charles E. Wimberley and
Steffen Heber},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {PeakPass: Automating ChIP-Seq Blacklist Creation},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {232--243},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_20},
doi = {10.1007/978-3-030-20242-2\_20},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WimberleyH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YanDZW0W19,
author = {Cheng Yan and
Guihua Duan and
Yayan Zhang and
Fang{-}Xiang Wu and
Yi Pan and
Jianxin Wang},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {{IDNDDI:} An Integrated Drug Similarity Network Method for Predicting
Drug-Drug Interactions},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {89--99},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_8},
doi = {10.1007/978-3-030-20242-2\_8},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/YanDZW0W19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YangLZMLZ19,
author = {Xiangyu Yang and
Zhenghao Li and
Jingtian Zhao and
Tao Ma and
Pengchao Li and
Le Zhang},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {The Review of Bioinformatics Tool for 3D Plant Genomics Research},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {16--27},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_2},
doi = {10.1007/978-3-030-20242-2\_2},
timestamp = {Wed, 01 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/YangLZMLZ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhaoSZSSSW19,
author = {Fengpan Zhao and
Pavel Skums and
Alex Zelikovsky and
Eric L. Sevigny and
Monica Haavisto Swahn and
Sheryl M. Strasser and
Yubao Wu},
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {Detecting Illicit Drug Ads in Google+ Using Machine Learning},
booktitle = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
pages = {171--179},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2\_15},
doi = {10.1007/978-3-030-20242-2\_15},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhaoSZSSSW19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2019,
editor = {Zhipeng Cai and
Pavel Skums and
Min Li},
title = {Bioinformatics Research and Applications - 15th International Symposium,
{ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11490},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-20242-2},
doi = {10.1007/978-3-030-20242-2},
isbn = {978-3-030-20241-5},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/2019.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AninditaMPHT18,
author = {Satya Anindita and
Atika Marnolia and
Hersal Hermana Putra and
Muhammad Chandra Haikal and
Usman Sumo Friend Tambunan},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {Novel Inhibitors of {T315I} Mutant {BCR-ABL1} Tyrosine Kinase for
Chronic Myeloid Leukemia Disease Through Fragment-Based Drug Design},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {185--190},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_17},
doi = {10.1007/978-3-319-94968-0\_17},
timestamp = {Thu, 20 Aug 2020 15:55:45 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AninditaMPHT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChurkinB18,
author = {Alexander Churkin and
Danny Barash},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {A Biologically Meaningful Extension of the Efficient Method for Deleterious
Mutations Prediction in RNAs: Insertions and Deletions in Addition
to Substitution Mutations},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {174--178},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_15},
doi = {10.1007/978-3-319-94968-0\_15},
timestamp = {Mon, 16 Jul 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ChurkinB18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/DengCLZLWL18,
author = {Canshang Deng and
Qingfeng Chen and
Zhixian Liu and
Ruiqing Zheng and
Jin Liu and
Jianxin Wang and
Wei Lan},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {{KSIBW:} Predicting Kinase-Substrate Interactions Based on Bi-random
Walk},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {151--162},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_13},
doi = {10.1007/978-3-319-94968-0\_13},
timestamp = {Fri, 21 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/DengCLZLWL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/DengDL18,
author = {Lei Deng and
Zuojin Dong and
Hui Liu},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {XPredRBR: Accurate and Fast Prediction of RNA-Binding Residues in
Proteins Using eXtreme Gradient Boosting},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {163--173},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_14},
doi = {10.1007/978-3-319-94968-0\_14},
timestamp = {Thu, 16 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/DengDL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/FuXY18,
author = {Xiaofeng Fu and
Yiqun Xiao and
Yang Yang},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {Prediction of Type {III} Secreted Effectors Based on Word Embeddings
for Protein Sequences},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {287--298},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_28},
doi = {10.1007/978-3-319-94968-0\_28},
timestamp = {Tue, 17 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/FuXY18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GogolewskiSCG18,
author = {Krzysztof Gogolewski and
Maciej Sykulski and
Neo Christopher Chung and
Anna Gambin},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {Truncated Robust Principal Component Analysis and Noise Reduction
for Single Cell RNA-seq Data},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {335--346},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_32},
doi = {10.1007/978-3-319-94968-0\_32},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GogolewskiSCG18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HaslamSWKSA018,
author = {Devin Haslam and
Salim Sazzed and
Willy Wriggers and
Julio Kovcas and
Junha Song and
Manfred Auer and
Jing He},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {A Pattern Recognition Tool for Medium-Resolution Cryo-EM Density Maps
and Low-Resolution Cryo-ET Density Maps},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {233--238},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_22},
doi = {10.1007/978-3-319-94968-0\_22},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HaslamSWKSA018.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HuangYLYCWH18,
author = {Ke Huang and
Shubo Yang and
Zhaojian Luo and
Ke Yang and
Menghan Chen and
Guopeng Wei and
Jian Huang},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {A Fast Genome Sequence Aligner Based on Minimal Perfect Hash Algorithm
Realized with {FPGA} Based Heterogeneous Computing Platform},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {227--232},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_21},
doi = {10.1007/978-3-319-94968-0\_21},
timestamp = {Wed, 05 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/HuangYLYCWH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HuangZ18,
author = {Suyun Huang and
Xing{-}Ming Zhao},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {Prediction of Drug Response with a Topology Based Dual-Layer Network
Model},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {3--12},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_1},
doi = {10.1007/978-3-319-94968-0\_1},
timestamp = {Mon, 16 Jul 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HuangZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/IslamRYXZR18,
author = {Tunazzina Islam and
Desh Ranjan and
Eleanor Young and
Ming Xiao and
Mohammad Zubair and
Harold Riethman},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {{REXTAL:} Regional Extension of Assemblies Using Linked-Reads},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {63--78},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_6},
doi = {10.1007/978-3-319-94968-0\_6},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/IslamRYXZR18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/JingZCZ18,
author = {Fang Jing and
Shao{-}Wu Zhang and
Zhen Cao and
Shihua Zhang},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {Combining Sequence and Epigenomic Data to Predict Transcription Factor
Binding Sites Using Deep Learning},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {241--252},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_23},
doi = {10.1007/978-3-319-94968-0\_23},
timestamp = {Tue, 10 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/JingZCZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LetuSJZ18,
author = {Letu Qingge and
Killian Smith and
Sean Jungst and
Binhai Zhu},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {On Approaching the One-Sided Exemplar Adjacency Number Problem},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {275--286},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_27},
doi = {10.1007/978-3-319-94968-0\_27},
timestamp = {Tue, 02 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LetuSJZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiLSLZ18,
author = {Huiyu Li and
Shengjun Li and
Junliang Shang and
Jin{-}Xing Liu and
Chun{-}Hou Zheng},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {An Improved Particle Swarm Optimization with Dynamic Scale-Free Network
for Detecting Multi-omics Features},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {26--37},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_3},
doi = {10.1007/978-3-319-94968-0\_3},
timestamp = {Sat, 13 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiLSLZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiuHZW18,
author = {Liyuan Liu and
Meng Han and
Yiyun Zhou and
Yan Wang},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {{LSTM} Recurrent Neural Networks for Influenza Trends Prediction},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {259--264},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_25},
doi = {10.1007/978-3-319-94968-0\_25},
timestamp = {Sat, 04 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LiuHZW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiuS18,
author = {Shuhui Liu and
Xuequn Shang},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {Hierarchical Similarity Network Fusion for Discovering Cancer Subtypes},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {125--136},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_11},
doi = {10.1007/978-3-319-94968-0\_11},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiuS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiuXYZ18,
author = {Guangdi Liu and
Yuan Xia and
Chuanwei Yang and
Le Zhang},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {The Review of the Major Entropy Methods and Applications in Biomedical
Signal Research},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {87--100},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_8},
doi = {10.1007/978-3-319-94968-0\_8},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LiuXYZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LuoTCXW18,
author = {Ping Luo and
Li{-}Ping Tian and
Bolin Chen and
Qianghua Xiao and
Fang{-}Xiang Wu},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {Predicting Gene-Disease Associations with Manifold Learning},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {265--271},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_26},
doi = {10.1007/978-3-319-94968-0\_26},
timestamp = {Thu, 01 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LuoTCXW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MaX18,
author = {Terry Ma and
Xin Xing},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {A Scalable Reference-Free Metagenomic Binning Pipeline},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {79--83},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_7},
doi = {10.1007/978-3-319-94968-0\_7},
timestamp = {Mon, 16 Jul 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MaX18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MoonE18,
author = {Jucheol Moon and
Oliver Eulenstein},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {Cluster Matching Distance for Rooted Phylogenetic Trees},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {321--332},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_31},
doi = {10.1007/978-3-319-94968-0\_31},
timestamp = {Mon, 16 Jul 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MoonE18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MoussaM18,
author = {Marmar Moussa and
Ion I. Mandoiu},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {Locality Sensitive Imputation for Single-Cell RNA-Seq Data},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {347--360},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_33},
doi = {10.1007/978-3-319-94968-0\_33},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MoussaM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/NgOS18,
author = {Albert Ng and
Adedayo Odesile and
Dong Si},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {{GPU} Accelerated Ray Tracing for the Beta-Barrel Detection from Three-Dimensional
Cryo-EM Maps},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {217--226},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_20},
doi = {10.1007/978-3-319-94968-0\_20},
timestamp = {Mon, 16 Jul 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/NgOS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/RizkiNSET18,
author = {Ilmi Fadhilah Rizki and
Mochammad Arfin Fardiansyah Nasution and
Syafrida Siregar and
Mega Maulina Ekawati and
Usman Sumo Friend Tambunan},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {Screening of Sonic Hedgehog (Shh) Inhibitors in the Hedgehog Signaling
Pathway from Traditional Chinese Medicine {(TCM)} Database Through
Structure-Based Pharmacophore Design},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {179--184},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_16},
doi = {10.1007/978-3-319-94968-0\_16},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/RizkiNSET18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SchultzX18,
author = {Daniel W. Schultz and
Bojian Xu},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {On k-Mismatch Shortest Unique Substring Queries Using {GPU}},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {193--204},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_18},
doi = {10.1007/978-3-319-94968-0\_18},
timestamp = {Mon, 16 Jul 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SchultzX18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ShiGW18,
author = {Kai Shi and
Lin Gao and
Bingbo Wang},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {Inferring Dysregulated Pathways of Driving Cancer Subtypes Through
Multi-omics Integration},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {101--112},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_9},
doi = {10.1007/978-3-319-94968-0\_9},
timestamp = {Mon, 08 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ShiGW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Snir18,
author = {Sagi Snir},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {Bounds on Identification of Genome Evolution Pacemakers},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {51--62},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_5},
doi = {10.1007/978-3-319-94968-0\_5},
timestamp = {Mon, 16 Jul 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Snir18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SnirY18,
author = {Sagi Snir and
Ben Yohay},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {Extending the Evolvability Model to the Prokaryotic World: Simulations
and Results on Real Data},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {299--313},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_29},
doi = {10.1007/978-3-319-94968-0\_29},
timestamp = {Mon, 16 Jul 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SnirY18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WuSZRL18,
author = {Yubao Wu and
Pavel Skums and
Alex Zelikovsky and
David Stiven Campo Rendon and
Xueting Liao},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {Predicting Opioid Epidemic by Using Twitter Data},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {314--318},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_30},
doi = {10.1007/978-3-319-94968-0\_30},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WuSZRL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YanLCP18,
author = {Ming Yan and
Ling Liu and
Sihan Chen and
Yi Pan},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {A Deep Learning Method for Prediction of Benign Epilepsy with Centrotemporal
Spikes},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {253--258},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_24},
doi = {10.1007/978-3-319-94968-0\_24},
timestamp = {Thu, 15 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/YanLCP18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhangWCLZ18,
author = {Jingrong Zhang and
Zihao Wang and
Yu Chen and
Zhiyong Liu and
Fa Zhang},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {Memory-Efficient and Stabilizing Management System and Parallel Methods
for {RELION} Using {CUDA} and {MPI}},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {205--216},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_19},
doi = {10.1007/978-3-319-94968-0\_19},
timestamp = {Thu, 19 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ZhangWCLZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhangWLSLW018,
author = {Zhen Zhang and
Jianxin Wang and
Junwei Luo and
Juan Shang and
Min Li and
Fang{-}Xiang Wu and
Yi Pan},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {Sprites2: Detection of Deletions Based on an Accurate Alignment Strategy},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {139--150},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_12},
doi = {10.1007/978-3-319-94968-0\_12},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhangWLSLW018.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Zhao18,
author = {Yue Zhao},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {An Extension of Deep Pathway Analysis: {A} Pathway Route Analysis
Framework Incorporating Multi-dimensional Cancer Genomics Data},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {113--124},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_10},
doi = {10.1007/978-3-319-94968-0\_10},
timestamp = {Mon, 16 Jul 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Zhao18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhaoZCLWL18,
author = {Siyu Zhao and
Ruiqing Zheng and
Xiang Chen and
Yaohang Li and
Fang{-}Xiang Wu and
Min Li},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {PBMarsNet: {A} Multivariate Adaptive Regression Splines Based Method
to Reconstruct Gene Regulatory Networks},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {38--48},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_4},
doi = {10.1007/978-3-319-94968-0\_4},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhaoZCLWL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhuLDX18,
author = {Qiao Zhu and
Jiawei Luo and
Pingjian Ding and
Qiu Xiao},
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {{GRTR:} Drug-Disease Association Prediction Based on Graph Regularized
Transductive Regression on Heterogeneous Network},
booktitle = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
pages = {13--25},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0\_2},
doi = {10.1007/978-3-319-94968-0\_2},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhuLDX18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2018,
editor = {Fa Zhang and
Zhipeng Cai and
Pavel Skums and
Shihua Zhang},
title = {Bioinformatics Research and Applications - 14th International Symposium,
{ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10847},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-94968-0},
doi = {10.1007/978-3-319-94968-0},
isbn = {978-3-319-94967-3},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/2018.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AndersenK17,
author = {Andrew Andersen and
Wooyoung Kim},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {NemoLib: {A} Java Library for Efficient Network Motif Detection},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {403--407},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_42},
doi = {10.1007/978-3-319-59575-7\_42},
timestamp = {Thu, 20 Aug 2020 15:58:55 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AndersenK17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ArtyomenkoISRKZ17,
author = {Alexander Artyomenko and
Pelin B. Icer and
Pavel Skums and
Sumathi Ramachandran and
Yury Khudyakov and
Alex Zelikovsky},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Agent-Based in Silico Evolution of {HCV} Quasispecies},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {420--424},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_45},
doi = {10.1007/978-3-319-59575-7\_45},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ArtyomenkoISRKZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChangCYH17,
author = {Kuang{-}Yu Chang and
Yun Cui and
Siu{-}Ming Yiu and
Wing{-}Kai Hon},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Reconstructing One-Articulated Networks with Distance Matrices},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {34--45},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_4},
doi = {10.1007/978-3-319-59575-7\_4},
timestamp = {Sat, 16 Sep 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ChangCYH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChenHW17,
author = {Zhi{-}Zhong Chen and
Youta Harada and
Lusheng Wang},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {A New 2-Approximation Algorithm for rSPR Distance},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {128--139},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_12},
doi = {10.1007/978-3-319-59575-7\_12},
timestamp = {Mon, 10 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ChenHW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChenJS17,
author = {Bolin Chen and
Yuqiong Jin and
Xuequn Shang},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Net2Image: {A} Network Representation Method for Identifying Cancer-Related
Genes},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {337--343},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_31},
doi = {10.1007/978-3-319-59575-7\_31},
timestamp = {Wed, 31 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ChenJS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChenWLWSZ17,
author = {Yu Chen and
Zihao Wang and
Lun Li and
Xiaohua Wan and
Fei Sun and
Fa Zhang},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {A Fully Automatic Geometric Parameters Determining Method for Electron
Tomography},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {385--389},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_39},
doi = {10.1007/978-3-319-59575-7\_39},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ChenWLWSZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/CiachLMLVSG17,
author = {Michal Aleksander Ciach and
Mateusz Krzysztof Lacki and
Blazej Miasojedow and
Frederik Lermyte and
Dirk Valkenborg and
Frank Sobott and
Anna Gambin},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Estimation of Rates of Reactions Triggered by Electron Transfer in
Top-Down Mass Spectrometry},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {96--107},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_9},
doi = {10.1007/978-3-319-59575-7\_9},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/CiachLMLVSG17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/CuiJML17,
author = {Jun Cui and
Ning Jiang and
Jun Meng and
Yushi Luan},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Genome-Wide Analysis of Response Regulator Genes in Solanum lycopersicum},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {379--384},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_38},
doi = {10.1007/978-3-319-59575-7\_38},
timestamp = {Wed, 31 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/CuiJML17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/CzajaE17,
author = {Wojciech Czaja and
Jeremiah Emidih},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Heterogeneous Cancer Cell Line Data Fusion for Identifying Novel Response
Determinants in Precision Medicine},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {414--419},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_44},
doi = {10.1007/978-3-319-59575-7\_44},
timestamp = {Wed, 31 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/CzajaE17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ElhefnawyLWL17,
author = {Wessam Elhefnawy and
Min Li and
Jianxin Wang and
Yaohang Li},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Construction of Protein Backbone Fragments Libraries on Large Protein
Sets Using a Randomized Spectral Clustering Algorithm},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {108--119},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_10},
doi = {10.1007/978-3-319-59575-7\_10},
timestamp = {Fri, 21 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ElhefnawyLWL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/FossoPRV17,
author = {Bruno Fosso and
Graziano Pesole and
Francesc Rossell{\'{o}} and
Gabriel Valiente},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Unbiased Taxonomic Annotation of Metagenomic Samples},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {162--173},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_15},
doi = {10.1007/978-3-319-59575-7\_15},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/FossoPRV17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GoreckiMMPE17,
author = {Pawel G{\'{o}}recki and
Alexey Markin and
Agnieszka Mykowiecka and
Jaroslaw Paszek and
Oliver Eulenstein},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Phylogenetic Tree Reconciliation: Mean Values for Fixed Gene Trees},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {234--245},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_21},
doi = {10.1007/978-3-319-59575-7\_21},
timestamp = {Fri, 17 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GoreckiMMPE17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GudenasW17,
author = {Brian L. Gudenas and
Liangjiang Wang},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {A Genetic Algorithm for Finding Discriminative Functional Motifs in
Long Non-coding RNAs},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {408--413},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_43},
doi = {10.1007/978-3-319-59575-7\_43},
timestamp = {Wed, 31 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GudenasW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GuoLXYWSX17,
author = {Kai Guo and
Hongfei Lin and
Bo Xu and
Zhihao Yang and
Jian Wang and
Yuanyuan Sun and
Kan Xu},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Detecting Potential Adverse Drug Reactions Using Association Rules
and Embedding Models},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {373--378},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_37},
doi = {10.1007/978-3-319-59575-7\_37},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/GuoLXYWSX17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HahnMM17,
author = {Alexander Hahn and
Somya D. Mohanty and
Prashanti Manda},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {What's Hot and What's Not? - Exploring Trends in Bioinformatics Literature
Using Topic Modeling and Keyword Analysis},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {279--290},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_25},
doi = {10.1007/978-3-319-59575-7\_25},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/HahnMM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HeLLYGW17,
author = {Zaobo He and
Yingshu Li and
Ji Li and
Jiguo Yu and
Hong Gao and
Jinbao Wang},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Addressing the Threats of Inference Attacks on Traits and Genotypes
from Individual Genomic Data},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {223--233},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_20},
doi = {10.1007/978-3-319-59575-7\_20},
timestamp = {Tue, 01 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HeLLYGW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HeLW17,
author = {Zaobo He and
Yingshu Li and
Jinbao Wang},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Differential Privacy Preserving Genomic Data Releasing via Factor
Graph},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {350--355},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_33},
doi = {10.1007/978-3-319-59575-7\_33},
timestamp = {Wed, 31 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HeLW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/JhaSZKS17,
author = {Deeptanshu Jha and
Pavel Skums and
Alex Zelikovsky and
Yury Khudyakov and
Rahul Singh},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Modeling the Spread of {HIV} and {HCV} Infections Based on Identification
and Characterization of High-Risk Communities Using Social Media},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {425--430},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_46},
doi = {10.1007/978-3-319-59575-7\_46},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/JhaSZKS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/KhattakSBD17,
author = {Naureen Aslam Khattak and
Sheikh Arslan Sehgal and
Yongsheng Bai and
Youping Deng},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Structure Modeling and Molecular Docking Studies of Schizophrenia
Candidate Genes, Synapsins 2 {(SYN2)} and Trace Amino Acid Receptor
{(TAAR6)}},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {291--301},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_26},
doi = {10.1007/978-3-319-59575-7\_26},
timestamp = {Wed, 31 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/KhattakSBD17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/KimN17,
author = {Sangwoo Kim and
Hojung Nam},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {In Silico Simulation of Signal Cascades in Biomedical Networks Based
on the Production Rule System},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {356--361},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_34},
doi = {10.1007/978-3-319-59575-7\_34},
timestamp = {Fri, 02 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/KimN17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiuL17,
author = {Wenping Liu and
Guangjian Liu},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Mapping Paratope and Epitope Residues of Antibody Pembrolizumab via
Molecular Dynamics Simulation},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {120--127},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_11},
doi = {10.1007/978-3-319-59575-7\_11},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LiuL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LotfiMV17,
author = {Mahsa Lotfi and
Burook Misganaw and
Mathukumalli Vidyasagar},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Prediction of Time to Tumor Recurrence in Ovarian Cancer: Comparison
of Three Sparse Regression Methods},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {1--11},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_1},
doi = {10.1007/978-3-319-59575-7\_1},
timestamp = {Wed, 31 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LotfiMV17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LovingSB17,
author = {Joshua Loving and
John P. Scaduto and
Gary Benson},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {An {SIMD} Algorithm for Wraparound Tandem Alignment},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {140--149},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_13},
doi = {10.1007/978-3-319-59575-7\_13},
timestamp = {Wed, 31 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LovingSB17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MaWZ17,
author = {Long Ma and
Zhibo Wang and
Yanqing Zhang},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Extracting Depression Symptoms from Social Networks and Web Blogs
via Text Mining},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {325--330},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_29},
doi = {10.1007/978-3-319-59575-7\_29},
timestamp = {Wed, 05 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MaWZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MandricKPSMZ17,
author = {Igor Mandric and
Sergey Knyazev and
Cory Padilla and
Frank Stewart and
Ion I. Mandoiu and
Alex Zelikovsky},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Metabolic Analysis of Metatranscriptomic Data from Planktonic Communities},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {396--402},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_41},
doi = {10.1007/978-3-319-59575-7\_41},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MandricKPSMZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MishraDLRS17,
author = {Rashika Mishra and
Ovidiu Daescu and
Patrick Leavey and
Dinesh Rakheja and
Anita Sengupta},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Histopathological Diagnosis for Viable and Non-viable Tumor Prediction
for Osteosarcoma Using Convolutional Neural Network},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {12--23},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_2},
doi = {10.1007/978-3-319-59575-7\_2},
timestamp = {Sat, 19 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MishraDLRS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/NgS17,
author = {Albert Ng and
Dong Si},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Genetic Algorithm Based Beta-Barrel Detection for Medium Resolution
Cryo-EM Density Maps},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {174--185},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_16},
doi = {10.1007/978-3-319-59575-7\_16},
timestamp = {Wed, 31 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/NgS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/NiLZDWLW17,
author = {Peng Ni and
Min Li and
Ping Zhong and
Guihua Duan and
Jianxin Wang and
Yaohang Li and
Fang{-}Xiang Wu},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Relating Diseases Based on Disease Module Theory},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {24--33},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_3},
doi = {10.1007/978-3-319-59575-7\_3},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/NiLZDWLW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/RosaG17,
author = {Rog{\'{e}}rio S. Rosa and
Katia S. Guimar{\~{a}}es},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Accurate Prediction of Haplotype Inference Errors by Feature Extraction},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {302--313},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_27},
doi = {10.1007/978-3-319-59575-7\_27},
timestamp = {Wed, 31 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/RosaG17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SouzaLA17,
author = {Michael Souza and
Carlile Lavor and
Rafael Alves},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Modeling the Molecular Distance Geometry Problem Using Dihedral Angles},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {270--278},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_24},
doi = {10.1007/978-3-319-59575-7\_24},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SouzaLA17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SubramaniamZY17,
author = {Meena Subramaniam and
Noah Zaitlen and
Jimmie Ye},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {PhAT-QTL: {A} Phase-Aware Test for {QTL} Detection},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {150--161},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_14},
doi = {10.1007/978-3-319-59575-7\_14},
timestamp = {Fri, 02 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/SubramaniamZY17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/TropeaVCHPFL17,
author = {Augustus N. Tropea and
Janey L. Valerio and
Michael J. Camerino and
Josh Hix and
Emmalee Pecor and
Peter G. Fuerst and
S. Seth Long},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Computer Assisted Segmentation Tool: {A} Machine Learning Based Image
Segmenting Tool for TrakEM2},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {246--257},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_22},
doi = {10.1007/978-3-319-59575-7\_22},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/TropeaVCHPFL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangCZLWLSZ17,
author = {Zihao Wang and
Yu Chen and
Jingrong Zhang and
Lun Li and
Xiaohua Wan and
Zhiyong Liu and
Fei Sun and
Fa Zhang},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Accelerating Electron Tomography Reconstruction Algorithm {ICON} Using
the Intel Xeon Phi Coprocessor on Tianhe-2 Supercomputer},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {258--269},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_23},
doi = {10.1007/978-3-319-59575-7\_23},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WangCZLWLSZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangYCXLYZ17,
author = {Lei Wang and
Zhu{-}Hong You and
Xing Chen and
Shixiong Xia and
Feng Liu and
Xin Yan and
Yong Zhou},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Computational Methods for the Prediction of Drug-Target Interactions
from Drug Fingerprints and Protein Sequences by Stacked Auto-Encoder
Deep Neural Network},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {46--58},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_5},
doi = {10.1007/978-3-319-59575-7\_5},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WangYCXLYZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/XiaZZFT17,
author = {Ruofan Xia and
Jun Zhou and
Lingxi Zhou and
Bing Feng and
Jijun Tang},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {A Median Solver and Phylogenetic Inference Based on {DCJ} Sorting},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {211--222},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_19},
doi = {10.1007/978-3-319-59575-7\_19},
timestamp = {Wed, 31 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/XiaZZFT17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/XiaoLZXP17,
author = {Xiuchun Xiao and
Bing Liu and
Jing Zhang and
Xueli Xiao and
Yi Pan},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Detecting Change Points in fMRI Data via Bayesian Inference and Genetic
Algorithm Model},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {314--324},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_28},
doi = {10.1007/978-3-319-59575-7\_28},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/XiaoLZXP17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YangG17,
author = {Yongxiao Yang and
Xinqi Gong},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Understanding Protein-Protein Interface Formation Mechanism in a New
Probability Way at Amino Acid Level},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {368--372},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_36},
doi = {10.1007/978-3-319-59575-7\_36},
timestamp = {Wed, 31 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/YangG17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YangZS17,
author = {Heng Yang and
Chunyu Zhao and
Ahmet Sacan},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Unfolding the Protein Surface for Pattern Matching},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {84--95},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_8},
doi = {10.1007/978-3-319-59575-7\_8},
timestamp = {Wed, 31 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/YangZS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YuYGP17,
author = {Ning Yu and
Zeng Yu and
Feng Gu and
Yi Pan},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Evaluating the Impact of Encoding Schemes on Deep Auto-Encoders for
{DNA} Annotation},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {390--395},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_40},
doi = {10.1007/978-3-319-59575-7\_40},
timestamp = {Fri, 03 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/YuYGP17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhangAZZCWHYZL17,
author = {Li Zhang and
Haixin Ai and
Qi Zhao and
Junfeng Zhu and
Wen Chen and
Xuewei Wu and
Liangchao Huang and
Zimo Yin and
Jian Zhao and
Hongsheng Liu},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Computational Prediction of Influenza Neuraminidase Inhibitors Using
Machine Learning Algorithms and Recursive Feature Elimination Method},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {344--349},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_32},
doi = {10.1007/978-3-319-59575-7\_32},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ZhangAZZCWHYZL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhangCW17,
author = {Silu Zhang and
Yixin Chen and
Dawn Wilkins},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {A Probabilistic Approach to Multiple-Instance Learning},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {331--336},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_30},
doi = {10.1007/978-3-319-59575-7\_30},
timestamp = {Wed, 11 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ZhangCW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhangGYYGZC17,
author = {Jingsong Zhang and
Jianmei Guo and
Xiaoqing Yu and
Xiangtian Yu and
Weifeng Guo and
Tao Zeng and
Luonan Chen},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Mining K-mers of Various Lengths in Biological Sequences},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {186--195},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_17},
doi = {10.1007/978-3-319-59575-7\_17},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhangGYYGZC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhangW17,
author = {Bo Zhang and
Yi{-}Chieh Wu},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Coestimation of Gene Trees and Reconciliations Under a Duplication-Loss-Coalescence
Model},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {196--210},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_18},
doi = {10.1007/978-3-319-59575-7\_18},
timestamp = {Wed, 31 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhangW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhaoFZZX17,
author = {Jin Zhao and
Haodi Feng and
Daming Zhu and
Chi Zhang and
Ying Xu},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {IsoTree: De Novo Transcriptome Assembly from RNA-Seq Reads - (Extended
Abstract)},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {71--83},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_7},
doi = {10.1007/978-3-319-59575-7\_7},
timestamp = {Mon, 13 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhaoFZZX17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhouLLZZ17,
author = {Wei Zhou and
Guangdi Liu and
Jun Luo and
Tingran Zhang and
Le Zhang},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Using the Precision Medicine Analytical Method to Investigate the
Impact of the Aerobic Exercise on the Hypertension for the Middle-Aged
Women},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {362--367},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_35},
doi = {10.1007/978-3-319-59575-7\_35},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ZhouLLZZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhouQS17,
author = {Yiqian Zhou and
Rehman Qureshi and
Ahmet Sacan},
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Analysis of Paired miRNA-mRNA Microarray Expression Data Using a Stepwise
Multiple Linear Regression Model},
booktitle = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
pages = {59--70},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7\_6},
doi = {10.1007/978-3-319-59575-7\_6},
timestamp = {Wed, 31 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhouQS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2017,
editor = {Zhipeng Cai and
Ovidiu Daescu and
Min Li},
title = {Bioinformatics Research and Applications - 13th International Symposium,
{ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10330},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59575-7},
doi = {10.1007/978-3-319-59575-7},
isbn = {978-3-319-59574-0},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/2017.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AganezovA16,
author = {Sergey Aganezov Jr. and
Max A. Alekseyev},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {Multi-genome Scaffold Co-assembly Based on the Analysis of Gene Orders
and Genomic Repeats},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {237--249},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_20},
doi = {10.1007/978-3-319-38782-6\_20},
timestamp = {Tue, 14 May 2019 10:00:51 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AganezovA16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AnishchenkoBDDT16,
author = {Ivan V. Anishchenko and
Varsha D. Badal and
Taras Dauzhenka and
Madhurima Das and
Alexander V. Tuzikov and
Petras J. Kundrotas and
Ilya A. Vakser},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {Genome-Wide Structural Modeling of Protein-Protein Interactions},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {95--105},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_8},
doi = {10.1007/978-3-319-38782-6\_8},
timestamp = {Sat, 24 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/AnishchenkoBDDT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BonizzoniVPPR16,
author = {Paola Bonizzoni and
Gianluca Della Vedova and
Yuri Pirola and
Marco Previtali and
Raffaella Rizzi},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {{FSG:} Fast String Graph Construction for De Novo Assembly of Reads
Data},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {27--39},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_3},
doi = {10.1007/978-3-319-38782-6\_3},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BonizzoniVPPR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/EgorovaGKLOSK16,
author = {V. P. Egorova and
Halina V. Grushevskaya and
N. G. Krylova and
I. V. Lipnevich and
T. I. Orekhovskaja and
Boris G. Shulitski and
V. I. Krot},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {High-Performance Sensing of {DNA} Hybridization on Surface of Self-organized
MWCNT-Arrays Decorated by Organometallic Complexes},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {52--66},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_5},
doi = {10.1007/978-3-319-38782-6\_5},
timestamp = {Tue, 28 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/EgorovaGKLOSK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/EshlemanS16,
author = {Ryan Eshleman and
Rahul Singh},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {Progression Reconstruction from Unsynchronized Biological Data using
Cluster Spanning Trees},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {136--147},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_12},
doi = {10.1007/978-3-319-38782-6\_12},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/EshlemanS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/FlynnS16,
author = {Emily Flynn and
Ileana Streinu},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {Consistent Visualization of Multiple Rigid Domain Decompositions of
Proteins},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {151--162},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_13},
doi = {10.1007/978-3-319-38782-6\_13},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/FlynnS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GoreckiPM16,
author = {Pawel G{\'{o}}recki and
Jaroslaw Paszek and
Agnieszka Mykowiecka},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {Mean Values of Gene Duplication and Loss Cost Functions},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {189--199},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_16},
doi = {10.1007/978-3-319-38782-6\_16},
timestamp = {Fri, 17 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GoreckiPM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Kirkpatrick16,
author = {Bonnie Kirkpatrick},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {Haplotype Inference for Pedigrees with Few Recombinations},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {269--283},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_23},
doi = {10.1007/978-3-319-38782-6\_23},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Kirkpatrick16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LegeayDR16,
author = {Marc Legeay and
B{\'{e}}atrice Duval and
Jean{-}Pierre Renou},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {Differential Functional Analysis and Change Motifs in Gene Networks
to Explore the Role of Anti-sense Transcription},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {117--126},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_10},
doi = {10.1007/978-3-319-38782-6\_10},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LegeayDR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LetuLZZ16,
author = {Letu Qingge and
Xiaowen Liu and
Farong Zhong and
Binhai Zhu},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {Filling a Protein Scaffold with a Reference},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {175--186},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_15},
doi = {10.1007/978-3-319-38782-6\_15},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LetuLZZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiCNWP16,
author = {Min Li and
Xiaopei Chen and
Peng Ni and
Jianxin Wang and
Yi Pan},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {Identifying Essential Proteins by Purifying Protein Interaction Networks},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {106--116},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_9},
doi = {10.1007/978-3-319-38782-6\_9},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiCNWP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiMLKXYCY16,
author = {Menglu Li and
Angel C. Y. Mak and
Ernest T. Lam and
Pui{-}Yan Kwok and
Ming Xiao and
Kevin Y. Yip and
Ting{-}Fung Chan and
Siu{-}Ming Yiu},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {Towards a More Accurate Error Model for BioNano Optical Maps},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {67--79},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_6},
doi = {10.1007/978-3-319-38782-6\_6},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiMLKXYCY16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Lipinski-PaesTB16,
author = {Thiago Lipinski{-}Paes and
Michele dos Santos da Silva Tanus and
Jos{\'{e}} Fernando Ruggiero Bachega and
Osmar Norberto de Souza},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {A Multiagent Ab Initio Protein Structure Prediction Tool for Novices
and Experts},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {163--174},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_14},
doi = {10.1007/978-3-319-38782-6\_14},
timestamp = {Fri, 02 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/Lipinski-PaesTB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LuhmannTOWC16,
author = {Nina Luhmann and
Annelyse Th{\'{e}}venin and
A{\"{\i}}da Ouangraoua and
Roland Wittler and
C{\'{e}}dric Chauve},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {The {SCJ} Small Parsimony Problem for Weighted Gene Adjacencies},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {200--210},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_17},
doi = {10.1007/978-3-319-38782-6\_17},
timestamp = {Thu, 15 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LuhmannTOWC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MangulYHTZE16,
author = {Serghei Mangul and
Harry (Taegyun) Yang and
Farhad Hormozdiari and
Elizabeth Tseng and
Alex Zelikovsky and
Eleazar Eskin},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {HapIso: An Accurate Method for the Haplotype-Specific Isoforms Reconstruction
from Long Single-Molecule Reads},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {80--92},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_7},
doi = {10.1007/978-3-319-38782-6\_7},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MangulYHTZE16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Marczyk16,
author = {Michal Marczyk},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {Improved Detection of 2D Gel Electrophoresis Spots by Using Gaussian
Mixture Model},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {284--294},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_24},
doi = {10.1007/978-3-319-38782-6\_24},
timestamp = {Sun, 04 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Marczyk16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MarkinE16,
author = {Alexey Markin and
Oliver Eulenstein},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {Path-Difference Median Trees},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {211--223},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_18},
doi = {10.1007/978-3-319-38782-6\_18},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MarkinE16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MoriyamaSCYIM16,
author = {Takuya Moriyama and
Yuichi Shiraishi and
Kenichi Chiba and
Rui Yamaguchi and
Seiya Imoto and
Satoru Miyano},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {OVarCall: Bayesian Mutation Calling Method Utilizing Overlapping Paired-End
Reads},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {40--51},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_4},
doi = {10.1007/978-3-319-38782-6\_4},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MoriyamaSCYIM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/PengLYWP16,
author = {Wei Peng and
Wei Lan and
Zeng Yu and
Jianxin Wang and
Yi Pan},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {Predicting MicroRNA-Disease Associations by Random Walking on Multiple
Networks},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {127--135},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_11},
doi = {10.1007/978-3-319-38782-6\_11},
timestamp = {Tue, 16 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/PengLYWP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SergeevKGRT16,
author = {Roman Sergeev and
Ivan Kavaliou and
Andrei E. Gabrielian and
Alex Rosenthal and
Alexander Tuzikov},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {Methods for Genome-Wide Analysis of {MDR} and {XDR} Tuberculosis from
Belarus},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {258--268},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_22},
doi = {10.1007/978-3-319-38782-6\_22},
timestamp = {Thu, 29 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SergeevKGRT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ThankachanCA16,
author = {Sharma V. Thankachan and
Sriram P. Chockalingam and
Srinivas Aluru},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {An Efficient Algorithm for Finding All Pairs k-Mismatch Maximal Common
Substrings},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {3--14},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_1},
doi = {10.1007/978-3-319-38782-6\_1},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ThankachanCA16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangZLD16,
author = {Lu Wang and
Dongxiao Zhu and
Yan Li and
Ming Dong},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {Poisson-Markov Mixture Model and Parallel Algorithm for Binning Massive
and Heterogenous {DNA} Sequencing Reads},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {15--26},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_2},
doi = {10.1007/978-3-319-38782-6\_2},
timestamp = {Thu, 04 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WangZLD16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YeRJZM16,
author = {Min Ye and
Gabriela C. Racz and
Qijia Jiang and
Xiuwei Zhang and
Bernard M. E. Moret},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {NEMo: An Evolutionary Model with Modularity for {PPI} Networks},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {224--236},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_19},
doi = {10.1007/978-3-319-38782-6\_19},
timestamp = {Sun, 04 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/YeRJZM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZaikaDG16,
author = {Andrey V. Zaika and
Iakov I. Davydov and
Mikhail S. Gelfand},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {Selectoscope: {A} Modern Web-App for Positive Selection Analysis of
Genomic Data},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {253--257},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_21},
doi = {10.1007/978-3-319-38782-6\_21},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZaikaDG16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2016,
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6},
doi = {10.1007/978-3-319-38782-6},
isbn = {978-3-319-38781-9},
timestamp = {Tue, 14 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/2016.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Al-NasrH15,
author = {Kamal Al{-}Nasr and
Jing He},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {Deriving Protein Backbone Using Traces Extracted from Density Maps
at Medium Resolutions},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {1--11},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_1},
doi = {10.1007/978-3-319-19048-8\_1},
timestamp = {Tue, 14 May 2019 10:00:51 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Al-NasrH15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AyadaNHMI15,
author = {Emi Ayada and
Atsushi Niida and
Takanori Hasegawa and
Satoru Miyano and
Seiya Imoto},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {Binary Contingency Table Method for Analyzing Gene Mutation in Cancer
Genome},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {12--23},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_2},
doi = {10.1007/978-3-319-19048-8\_2},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AyadaNHMI15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AzimIRS15,
author = {Md. Aashikur Rahman Azim and
Costas S. Iliopoulos and
M. Sohel Rahman and
M. Samiruzzaman},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {A Filter-Based Approach for Approximate Circular Pattern Matching},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {24--35},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_3},
doi = {10.1007/978-3-319-19048-8\_3},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AzimIRS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BetkierSG15,
author = {Arkadiusz Betkier and
Pawel Szczesny and
Pawel G{\'{o}}recki},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {Fast Algorithms for Inferring Gene-Species Associations},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {36--47},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_4},
doi = {10.1007/978-3-319-19048-8\_4},
timestamp = {Fri, 17 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BetkierSG15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BhattacharyyaM15,
author = {Sourya Bhattacharyya and
Jayanta Mukhopadhyay},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {Couplet Supertree Based Species Tree Estimation},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {48--59},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_5},
doi = {10.1007/978-3-319-19048-8\_5},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BhattacharyyaM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BiswasRZH15,
author = {Abhishek Biswas and
Desh Ranjan and
Mohammad Zubair and
Jing He},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {A Novel Computational Method for Deriving Protein Secondary Structure
Topologies Using Cryo-EM Density Maps and Multiple Secondary Structure
Predictions},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {60--71},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_6},
doi = {10.1007/978-3-319-19048-8\_6},
timestamp = {Fri, 09 Feb 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/BiswasRZH15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BowersJS15,
author = {John Christopher Bowers and
Rose Tharail John and
Ileana Streinu},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {Managing Reproducible Computational Experiments with Curated Proteins
in {KINARI-2}},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {72--83},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_7},
doi = {10.1007/978-3-319-19048-8\_7},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BowersJS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/DincPA15,
author = {Imren Din{\c{c}} and
Marc L. Pusey and
Ramazan S. Ayg{\"{u}}n},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {Protein Crystallization Screening Using Associative Experimental Design},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {84--95},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_8},
doi = {10.1007/978-3-319-19048-8\_8},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/DincPA15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GalvaoBD15,
author = {Gustavo Rodrigues Galv{\~{a}}o and
Christian Baudet and
Zanoni Dias},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {Sorting Signed Circular Permutations by Super Short Reversals},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {272--283},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_23},
doi = {10.1007/978-3-319-19048-8\_23},
timestamp = {Sun, 04 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GalvaoBD15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GuoZCDP15,
author = {Xuan Guo and
Jing Zhang and
Zhipeng Cai and
Ding{-}Zhu Du and
Yi Pan},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {{DAM:} {A} Bayesian Method for Detecting Genome-wide Associations
on Multiple Diseases},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {96--107},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_9},
doi = {10.1007/978-3-319-19048-8\_9},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GuoZCDP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HeWP15,
author = {Dan He and
Zhanyong Wang and
Laxmi Parida},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {{MINED:} An Efficient Mutual Information Based Epistasis Detection
Method to Improve Quantitative Genetic Trait Prediction},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {108--124},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_10},
doi = {10.1007/978-3-319-19048-8\_10},
timestamp = {Tue, 27 Mar 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HeWP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HerndonC15,
author = {Nic Herndon and
Doina Caragea},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {Domain Adaptation with Logistic Regression for the Task of Splice
Site Prediction},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {125--137},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_11},
doi = {10.1007/978-3-319-19048-8\_11},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HerndonC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HuMSAH15,
author = {Qiwen Hu and
Catharina Merchante and
Anna N. Stepanova and
Jos{\'{e}} M. Alonso and
Steffen Heber},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {A Stacking-Based Approach to Identify Translated Upstream Open Reading
Frames in Arabidopsis Thaliana},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {138--149},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_12},
doi = {10.1007/978-3-319-19048-8\_12},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HuMSAH15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HuangJJW15,
author = {Yuanyuan Huang and
Kejue Jia and
Robert L. Jernigan and
Zhijun Wu},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {{PRESS-PLOT:} An Online Server for Protein Structural Analysis and
Evaluation with Residue-level Virtual Angle Correlation Plots},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {150--161},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_13},
doi = {10.1007/978-3-319-19048-8\_13},
timestamp = {Mon, 28 Nov 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/HuangJJW15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/JiLW15,
author = {Hao Ji and
Yaohang Li and
Seth H. Weinberg},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {Calcium Ion Fluctuations Alter Channel Gating in a Stochastic Luminal
Calcium Release Site Model},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {162--174},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_14},
doi = {10.1007/978-3-319-19048-8\_14},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/JiLW15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/KordiB15,
author = {Misagh Kordi and
Mukul S. Bansal},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {On the Complexity of Duplication-Transfer-Loss Reconciliation with
Non-binary Gene Trees},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {187--198},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_16},
doi = {10.1007/978-3-319-19048-8\_16},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/KordiB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiCYHTLTWY15,
author = {Menglu Li and
Micheal Cheng and
Yongtao Ye and
Wing{-}Kai Hon and
Hing{-}Fung Ting and
Tak Wah Lam and
Cy Tang and
Thomas Wong and
Siu{-}Ming Yiu},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {Predicting {RNA} Secondary Structures: One-grammar-fits-all Solution},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {211--222},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_18},
doi = {10.1007/978-3-319-19048-8\_18},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiCYHTLTWY15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiNLL15,
author = {Jin Li and
Yen Kaow Ng and
Xingwu Liu and
Shuai Cheng Li},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {On the Near-Linear Correlation of the Eigenvalues Across {BLOSUM}
Matrices},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {199--210},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_17},
doi = {10.1007/978-3-319-19048-8\_17},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LiNLL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiuSLMZ15,
author = {Yi Liu and
Weiping Sun and
Gilles A. Lajoie and
Bin Ma and
Kaizhong Zhang},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {An Approach for Matching Mixture {MS/MS} Spectra with a Pair of Peptide
Sequences in a Protein Database},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {223--234},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_19},
doi = {10.1007/978-3-319-19048-8\_19},
timestamp = {Mon, 13 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LiuSLMZ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MakinenV15,
author = {Veli M{\"{a}}kinen and
Daniel Valenzuela},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {Diploid Alignments and Haplotyping},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {235--246},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_20},
doi = {10.1007/978-3-319-19048-8\_20},
timestamp = {Wed, 20 Dec 2017 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/MakinenV15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MolloyS15,
author = {Kevin Molloy and
Amarda Shehu},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {Interleaving Global and Local Search for Protein Motion Computation},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {175--186},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_15},
doi = {10.1007/978-3-319-19048-8\_15},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MolloyS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/NunesVFBC15,
author = {Vinicius Schmitz Nunes and
Eveline Gomes Vasconcelos and
Priscila Faria{-}Pinto and
Carlos Cristiano H. Borges and
Priscila V. S. Z. Capriles},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {Structural Comparative Analysis of Ecto- NTPDase Models from S. Mansoni
and H. Sapiens},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {247--259},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_21},
doi = {10.1007/978-3-319-19048-8\_21},
timestamp = {Mon, 06 Nov 2017 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/NunesVFBC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/RajaramanCP15,
author = {Ashok Rajaraman and
C{\'{e}}dric Chauve and
Yann Ponty},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {Assessing the Robustness of Parsimonious Predictions for Gene Neighborhoods
from Reconciled Phylogenies: Supplementary Material},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {260--271},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_22},
doi = {10.1007/978-3-319-19048-8\_22},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/RajaramanCP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/RoyPM15,
author = {Kaushik Roy and
Satish Chandra Panigrahi and
Asish Mukhopadhyay},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {Multiple Alignment of Structures Using Center Of ProTeins},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {284--296},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_24},
doi = {10.1007/978-3-319-19048-8\_24},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/RoyPM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SahaR15,
author = {Subrata Saha and
Sanguthevar Rajasekaran},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {{NRRC:} {A} Non-referential Reads Compression Algorithm},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {297--308},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_25},
doi = {10.1007/978-3-319-19048-8\_25},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SahaR15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ShafinKRAKHR15,
author = {Md. Kishwar Shafin and
Kazi Lutful Kabir and
Iffatur Ridwan and
Tasmiah Tamzid Anannya and
Rashid Saadman Karim and
Mohammad Mozammel Hoque and
M. Sohel Rahman},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {New Heuristics for Clustering Large Biological Networks},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {309--319},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_26},
doi = {10.1007/978-3-319-19048-8\_26},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ShafinKRAKHR15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SunLMZ15,
author = {Weiping Sun and
Gilles A. Lajoie and
Bin Ma and
Kaizhong Zhang},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {A Novel Algorithm for Glycan de novo Sequencing Using Tandem Mass
Spectrometry},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {320--330},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_27},
doi = {10.1007/978-3-319-19048-8\_27},
timestamp = {Mon, 13 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/SunLMZ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/TangiralaHC15,
author = {Karthik Tangirala and
Nic Herndon and
Doina Caragea},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {Community Detection-Based Feature Construction for Protein Sequence
Classification},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {331--342},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_28},
doi = {10.1007/978-3-319-19048-8\_28},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/TangiralaHC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/XuC15,
author = {Jing Xu and
Andrey N. Chernikov},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {Curvilinear Triangular Discretization of Biomedical Images},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {343--354},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_29},
doi = {10.1007/978-3-319-19048-8\_29},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/XuC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YangDCHCX15,
author = {Yubo Yang and
Cuihong Dai and
Zhipeng Cai and
Aiju Hou and
Dayou Cheng and
Dechang Xu},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {The Role of miRNAs in Cisplatin-Resistant HeLa Cells},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {355--365},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_30},
doi = {10.1007/978-3-319-19048-8\_30},
timestamp = {Wed, 14 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/YangDCHCX15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YuGGP15,
author = {Ning Yu and
Xuan Guo and
Feng Gu and
Yi Pan},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {{DNA} {AS} {X:} An Information-Coding-Based Model to Improve the Sensitivity
in Comparative Gene Analysis},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {366--377},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_31},
doi = {10.1007/978-3-319-19048-8\_31},
timestamp = {Fri, 03 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/YuGGP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YuN15,
author = {Yun Yu and
Luay Nakhleh},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {A Distance-Based Method for Inferring Phylogenetic Networks in the
Presence of Incomplete Lineage Sorting},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {378--389},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_32},
doi = {10.1007/978-3-319-19048-8\_32},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/YuN15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhaoWWP15,
author = {Bihai Zhao and
Jianxin Wang and
Fang{-}Xiang Wu and
Yi Pan},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {Predicting Protein Functions Based on Dynamic Protein Interaction
Networks},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {390--401},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_33},
doi = {10.1007/978-3-319-19048-8\_33},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhaoWWP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhouLHT15,
author = {Jun Zhou and
Yu Lin and
William Hoskins and
Jijun Tang},
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {An Iterative Approach for Phylogenetic Analysis of Tumor Progression
Using {FISH} Copy Number},
booktitle = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
pages = {402--412},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8\_34},
doi = {10.1007/978-3-319-19048-8\_34},
timestamp = {Tue, 31 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhouLHT15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2015,
editor = {Robert W. Harrison and
Yaohang Li and
Ion I. Mandoiu},
title = {Bioinformatics Research and Applications - 11th International Symposium,
{ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9096},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-19048-8},
doi = {10.1007/978-3-319-19048-8},
isbn = {978-3-319-19047-1},
timestamp = {Tue, 14 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/2015.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AcerbiS14,
author = {Enzo Acerbi and
Fabio Stella},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {Continuous Time Bayesian Networks for Gene Network Reconstruction:
{A} Comparative Study on Time Course Data},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {176--187},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_16},
doi = {10.1007/978-3-319-08171-7\_16},
timestamp = {Sun, 17 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/AcerbiS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AhmedM14,
author = {Syed Ali Ahmed and
Saad Mneimneh},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {Multiple {RNA} Interaction with Sub-optimal Solutions},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {149--162},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_14},
doi = {10.1007/978-3-319-08171-7\_14},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AhmedM14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Al-RajabL14,
author = {Murad M. Al{-}Rajab and
Joan Lu},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {Algorithms Implemented for Cancer Gene Searching and Classifications},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {59--70},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_6},
doi = {10.1007/978-3-319-08171-7\_6},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Al-RajabL14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChenRWWZ14,
author = {Yu Chen and
Fei Ren and
Xiaohua Wan and
Xuan Wang and
Fa Zhang},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {An Improved Correlation Method Based on Rotation Invariant Feature
for Automatic Particle Selection},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {114--125},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_11},
doi = {10.1007/978-3-319-08171-7\_11},
timestamp = {Thu, 19 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ChenRWWZ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChenX14,
author = {Yang Chen and
Rong Xu},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {Network Analysis of Human Disease Comorbidity Patterns Based on Large-Scale
Data Mining},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {243--254},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_22},
doi = {10.1007/978-3-319-08171-7\_22},
timestamp = {Wed, 16 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ChenX14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/DengZ14,
author = {Nan Deng and
Dongxiao Zhu},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {dSpliceType: {A} Multivariate Model for Detecting Various Types of
Differential Splicing Events Using RNA-Seq},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {322--333},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_29},
doi = {10.1007/978-3-319-08171-7\_29},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/DengZ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/DingGZLW14,
author = {Xiaojun Ding and
Haihua Gu and
Zhen Zhang and
Min Li and
Fang{-}Xiang Wu},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {Searching {SNP} Combinations Related to Evolutionary Information of
Human Populations on HapMap Data},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {278--288},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_25},
doi = {10.1007/978-3-319-08171-7\_25},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/DingGZLW14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ForouzeshKM14,
author = {Negin Forouzesh and
Mohammad Reza Kazemi and
Ali Mohades},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {Structure-Based Analysis of Protein Binding Pockets Using Von Neumann
Entropy},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {301--309},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_27},
doi = {10.1007/978-3-319-08171-7\_27},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ForouzeshKM14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GoreckiPE14,
author = {Pawel G{\'{o}}recki and
Jaroslaw Paszek and
Oliver Eulenstein},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {Duplication Cost Diameters},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {212--223},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_19},
doi = {10.1007/978-3-319-08171-7\_19},
timestamp = {Fri, 17 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GoreckiPE14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HokszaS14,
author = {David Hoksza and
Petr Skoda},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {2D Pharmacophore Query Generation},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {289--300},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_26},
doi = {10.1007/978-3-319-08171-7\_26},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/HokszaS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Hu14,
author = {Wei Hu},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {Functional Interplay between Hemagglutinin and Neuraminidase of Pandemic
2009 {H1N1} from the Perspective of Virus Evolution},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {38--49},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_4},
doi = {10.1007/978-3-319-08171-7\_4},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Hu14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HuY14,
author = {Jing Hu and
Xianghe Yan},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {Predicting Protein Submitochondrial Locations Using a K-Nearest Neighbors
Method Based on the Bit-Score Weighted Euclidean Distance},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {50--58},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_5},
doi = {10.1007/978-3-319-08171-7\_5},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HuY14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/JiangHX14,
author = {Xingpeng Jiang and
Xiaohua Hu and
Weiwei Xu},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {Joint Analysis of Functional and Phylogenetic Composition for Human
Microbiome Data},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {346--356},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_31},
doi = {10.1007/978-3-319-08171-7\_31},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/JiangHX14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiB14,
author = {Xiao{-}Bo Li and
Forbes J. Burkowski},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {Conformational Transitions and Principal Geodesic Analysis on the
Positive Semidefinite Matrix Manifold},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {334--345},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_30},
doi = {10.1007/978-3-319-08171-7\_30},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiB14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiLNWP14,
author = {Min Li and
Yu Lu and
Zhibei Niu and
Fang{-}Xiang Wu and
Yi Pan},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {Identification of Essential Proteins by Using Complexes and Interaction
Network},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {255--265},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_23},
doi = {10.1007/978-3-319-08171-7\_23},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiLNWP14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiuMZL14,
author = {Yi Liu and
Bin Ma and
Kaizhong Zhang and
Gilles A. Lajoie},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {An Effective Algorithm for Peptide de novo Sequencing from Mixture
{MS/MS} Spectra},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {126--137},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_12},
doi = {10.1007/978-3-319-08171-7\_12},
timestamp = {Mon, 13 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LiuMZL14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiuWZ14,
author = {Mingming Liu and
Layne T. Watson and
Liqing Zhang},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {Classification of Mutations by Functional Impact Type: Gain of Function,
Loss of Function, and Switch of Function},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {236--242},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_21},
doi = {10.1007/978-3-319-08171-7\_21},
timestamp = {Fri, 20 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LiuWZ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LuDHCCX14,
author = {Xiyuan Lu and
Cuihong Dai and
Aiju Hou and
Jie Cui and
Dayou Cheng and
Dechang Xu},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {Dysregulated microRNA Profile in HeLa Cell Lines Induced by Lupeol},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {71--80},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_7},
doi = {10.1007/978-3-319-08171-7\_7},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LuDHCCX14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/PanigrahiM14,
author = {Satish Ch. Panigrahi and
Asish Mukhopadhyay},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {An Eigendecomposition Method for Protein Structure Alignment},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {24--37},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_3},
doi = {10.1007/978-3-319-08171-7\_3},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/PanigrahiM14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SteipeT14,
author = {Boris Steipe and
Bhooma Thiruv},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {schematikon: Detailed Sequence-Structure Relationships from Mining
a Non-redundant Protein Structure Database - (Extended Abstract)},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {357--366},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_32},
doi = {10.1007/978-3-319-08171-7\_32},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SteipeT14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SunKT14,
author = {Shuhao Sun and
Fima C. Klebaner and
Tianhai Tian},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {A New Mathematical Model for Inbreeding Depression in Large Populations},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {310--321},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_28},
doi = {10.1007/978-3-319-08171-7\_28},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/SunKT14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SunZWCDW14,
author = {Ying Sun and
Chunguang Zhou and
Jiaxin Wang and
Zhongbo Cao and
Wei Du and
Yan Wang},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {Computational Prediction of Human Saliva-Secreted Proteins},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {92--101},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_9},
doi = {10.1007/978-3-319-08171-7\_9},
timestamp = {Thu, 30 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SunZWCDW14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/UlfenborgKO14,
author = {Benjamin Ulfenborg and
Karin Klinga{-}Levan and
Bj{\"{o}}rn Olsson},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {GenoScan: Genomic Scanner for Putative miRNA Precursors},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {266--277},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_24},
doi = {10.1007/978-3-319-08171-7\_24},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/UlfenborgKO14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WuSLW14,
author = {Lin Wu and
Yichao Shen and
Min Li and
Fang{-}Xiang Wu},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {Drug Target Identification Based on Structural Output Controllability
of Complex Networks},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {188--199},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_17},
doi = {10.1007/978-3-319-08171-7\_17},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WuSLW14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Xia14,
author = {Xuhua Xia},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {Phylogenetic Bias in the Likelihood Method Caused by Missing Data
Coupled with Among-Site Rate Variation: An Analytical Approach},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {12--23},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_2},
doi = {10.1007/978-3-319-08171-7\_2},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Xia14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/XuCLZODHCL14,
author = {Dechang Xu and
Zhipeng Cai and
Ke Liu and
Xiangmiao Zeng and
Yujing Ouyang and
Cuihong Dai and
Aiju Hou and
Dayou Cheng and
Jianzhong Li},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {A Simulation for Proportional Biological Operational Mu-Circuit},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {81--91},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_8},
doi = {10.1007/978-3-319-08171-7\_8},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/XuCLZODHCL14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YanKW14,
author = {Yan Yan and
Anthony J. Kusalik and
Fang{-}Xiang Wu},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {NovoGMET: De Novo Peptide Sequencing Using Graphs with Multiple Edge
Types {(GMET)} for {ETD/ECD} Spectra},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {200--211},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_18},
doi = {10.1007/978-3-319-08171-7\_18},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/YanKW14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YangYZZ14,
author = {Jing Yang and
Dengju Yao and
Xiaojuan Zhan and
Xiaorong Zhan},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {Predicting Disease Risks Using Feature Selection Based on Random Forest
and Support Vector Machine},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {1--11},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_1},
doi = {10.1007/978-3-319-08171-7\_1},
timestamp = {Sun, 05 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/YangYZZ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YueWXC14,
author = {Zongliang Yue and
Ping Wan and
Zhan Xie and
Jake Y. Chen},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {Computational Identification of De-Centric Genetic Regulatory Relationships
from Functional Genomic Data},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {224--235},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_20},
doi = {10.1007/978-3-319-08171-7\_20},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/YueWXC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhangWZRWL14,
author = {Jingrong Zhang and
Xiaohua Wan and
Fa Zhang and
Fei Ren and
Xuan Wang and
Zhiyong Liu},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {A Parallel Scheme for Three-Dimensional Reconstruction in Large-Field
Electron Tomography},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {102--113},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_10},
doi = {10.1007/978-3-319-08171-7\_10},
timestamp = {Thu, 19 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ZhangWZRWL14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhuYH14,
author = {Lin Zhu and
Zhu{-}Hong You and
De{-}Shuang Huang},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {Identifying Spurious Interactions in the Protein-Protein Interaction
Networks Using Local Similarity Preserving Embedding},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {138--148},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_13},
doi = {10.1007/978-3-319-08171-7\_13},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ZhuYH14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZohoraR14,
author = {Fatema Tuz Zohora and
M. Sohel Rahman},
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {Application of Consensus String Matching in the Diagnosis of Allelic
Heterogeneity - (Extended Abstract)},
booktitle = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
pages = {163--175},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7\_15},
doi = {10.1007/978-3-319-08171-7\_15},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZohoraR14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2014,
editor = {Mitra Basu and
Yi Pan and
Jianxin Wang},
title = {Bioinformatics Research and Applications - 10th International Symposium,
{ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8492},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08171-7},
doi = {10.1007/978-3-319-08171-7},
isbn = {978-3-319-08170-0},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/2014.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AshtawyM13,
author = {Hossam M. Ashtawy and
Nihar R. Mahapatra},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Does Accurate Scoring of Ligands against Protein Targets Mean Accurate
Ranking?},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {298--310},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_29},
doi = {10.1007/978-3-642-38036-5\_29},
timestamp = {Thu, 20 Aug 2020 15:56:19 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AshtawyM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Berger-Wolf13,
author = {Tanya Y. Berger{-}Wolf},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Computational Behavioral Ecology},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {3},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_3},
doi = {10.1007/978-3-642-38036-5\_3},
timestamp = {Sun, 04 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Berger-Wolf13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Chen13,
author = {Luonan Chen},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Identifying Critical Transitions of Biological Processes by Dynamical
Network Biomarkers},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {2},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_2},
doi = {10.1007/978-3-642-38036-5\_2},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Chen13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/CrepinHKTR13,
author = {Laurent Cr{\'{e}}pin and
Fabrice Harrouet and
S{\'{e}}bastien Kerd{\'{e}}lo and
Jacques Tisseau and
Pascal Redou},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Computational Methods for the Parallel 3D Simulation of Biochemical
Kinetics at the Microscopic Scale},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {28--39},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_7},
doi = {10.1007/978-3-642-38036-5\_7},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/CrepinHKTR13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/DingRMC13,
author = {Liang Ding and
Joseph Robertson and
Russell L. Malmberg and
Liming Cai},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Protein Closed Loop Prediction from Contact Probabilities},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {199--210},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_21},
doi = {10.1007/978-3-642-38036-5\_21},
timestamp = {Fri, 10 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/DingRMC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GuoDYP13,
author = {Xuan Guo and
Xiaojun Ding and
Meng Yu and
Yi Pan},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Cloud Computing for \emph{De Novo} Metagenomic Sequence Assembly},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {185--198},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_20},
doi = {10.1007/978-3-642-38036-5\_20},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GuoDYP13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Harvey13,
author = {Stephen C. Harvey},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Unusual {RNA} Structures: Information Content in RNAs from the "Prebiotic
Ribosome" to Modern Viruses},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {4},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_4},
doi = {10.1007/978-3-642-38036-5\_4},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Harvey13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HauserKIMMGS13,
author = {J{\"{o}}rg Hauser and
Kassian Kobert and
Fernando Izquierdo{-}Carrasco and
Karen Meusemann and
Bernhard Misof and
Michael Gertz and
Alexandros Stamatakis},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Heuristic Algorithms for the Protein Model Assignment Problem},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {137--148},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_16},
doi = {10.1007/978-3-642-38036-5\_16},
timestamp = {Mon, 07 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/HauserKIMMGS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HuZT13,
author = {Fei Hu and
Lingxi Zhou and
Jijun Tang},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Reconstructing Ancestral Genomic Orders Using Binary Encoding and
Probabilistic Models},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {17--27},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_6},
doi = {10.1007/978-3-642-38036-5\_6},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HuZT13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HuffnerKLN13,
author = {Falk H{\"{u}}ffner and
Christian Komusiewicz and
Adrian Liebtrau and
Rolf Niedermeier},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Partitioning Biological Networks into Highly Connected Clusters with
Maximum Edge Coverage},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {99--111},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_13},
doi = {10.1007/978-3-642-38036-5\_13},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HuffnerKLN13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/JayBC13,
author = {Jeremy J. Jay and
Erich J. Baker and
Elissa J. Chesler},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {A Context-Driven Gene Prioritization Method for Web-Based Functional
Genomics},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {161--172},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_18},
doi = {10.1007/978-3-642-38036-5\_18},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/JayBC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/KanjXZ13,
author = {Iyad A. Kanj and
Ge Xia and
Binhai Zhu},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {The Radiation Hybrid Map Construction Problem Is {FPT}},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {5--16},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_5},
doi = {10.1007/978-3-642-38036-5\_5},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/KanjXZ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiuCTLY13,
author = {Xuan Liu and
David Wai{-}Lok Cheung and
Hing{-}Fung Ting and
Tak Wah Lam and
Siu{-}Ming Yiu},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {LCR{\_}Finder: {A} de Novo Low Copy Repeat Finder for Human Genome},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {125--136},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_15},
doi = {10.1007/978-3-642-38036-5\_15},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LiuCTLY13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiuCZDKR13,
author = {Wenting Liu and
Kuiyu Chang and
Jie Zheng and
Jain Divya and
Jung{-}Jae Kim and
Jagath C. Rajapakse},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Gene Regulatory Networks from Gene Ontology},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {87--98},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_12},
doi = {10.1007/978-3-642-38036-5\_12},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LiuCZDKR13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Ma13,
author = {Bin Ma},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Peptide Identification from Mass Spectrometry},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {1},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_1},
doi = {10.1007/978-3-642-38036-5\_1},
timestamp = {Mon, 13 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/Ma13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MundraZNWR13,
author = {Piyushkumar A. Mundra and
Jie Zheng and
Mahesan Niranjan and
Roy E. Welsch and
Jagath C. Rajapakse},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Inferring Time-Delayed Gene Regulatory Networks Using Cross-Correlation
and Sparse Regression},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {64--75},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_10},
doi = {10.1007/978-3-642-38036-5\_10},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MundraZNWR13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/NaS13,
author = {Hyuntae Na and
Guang Song},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Ellipsoid-Weighted Protein Conformation Alignment},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {273--285},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_27},
doi = {10.1007/978-3-642-38036-5\_27},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/NaS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/NasrLRB13,
author = {Kamal Al{-}Nasr and
Chunmei Liu and
Mugizi Robert Rwebangira and
Legand Burge},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {A Graph Approach to Bridge the Gaps in Volumetric Electron Cryo-microscopy
Skeletons},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {211--223},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_22},
doi = {10.1007/978-3-642-38036-5\_22},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/NasrLRB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SkumsGZDRGK13,
author = {Pavel Skums and
Olga Glebova and
Alex Zelikovsky and
Zoya Dimitrova and
David Stiven Campo Rendon and
Lilia Ganova{-}Raeva and
Yuri Khudyakov},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Alignment of {DNA} Mass-Spectral Profiles Using Network Flows},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {149--160},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_17},
doi = {10.1007/978-3-642-38036-5\_17},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SkumsGZDRGK13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SongLSYW13,
author = {Xuebo Song and
Lin Li and
Pradip K. Srimani and
Philip S. Yu and
James Z. Wang},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Measure the Semantic Similarity of {GO} Terms Using Aggregate Information
Content},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {224--236},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_23},
doi = {10.1007/978-3-642-38036-5\_23},
timestamp = {Wed, 19 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/SongLSYW13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SrivastavaZLCM13,
author = {Anuj Srivastava and
Xiaoyu Zhang and
Sal LaMarca and
Liming Cai and
Russell L. Malmberg},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Patterns of Chromatin-Modifications Discriminate Different Genomic
Features in \emph{Arabidopsis}},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {52--63},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_9},
doi = {10.1007/978-3-642-38036-5\_9},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SrivastavaZLCM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ValimakiR13,
author = {Niko V{\"{a}}lim{\"{a}}ki and
Eric Rivals},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Scalable and Versatile \emph{k}-mer Indexing for High-Throughput Sequencing
Data},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {237--248},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_24},
doi = {10.1007/978-3-642-38036-5\_24},
timestamp = {Thu, 15 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ValimakiR13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/VoP13,
author = {Nam S. Vo and
Vinhthuy Phan},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Exploiting Dependencies of Patterns in Gene Expression Analysis Using
Pairwise Comparisons},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {173--184},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_19},
doi = {10.1007/978-3-642-38036-5\_19},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/VoP13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/VuCHLSSY13,
author = {Hoa Vu and
Francis Y. L. Chin and
Wing{-}Kai Hon and
Henry C. M. Leung and
Kunihiko Sadakane and
Ken Wing{-}Kin Sung and
Siu{-}Ming Yiu},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Reconstructing \emph{k}-Reticulated Phylogenetic Network from a Set
of Gene Trees},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {112--124},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_14},
doi = {10.1007/978-3-642-38036-5\_14},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/VuCHLSSY13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WiesekeLLM13,
author = {Nicolas Wieseke and
Marcus Lechner and
Marcus Ludwig and
Manja Marz},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {{POMAGO:} Multiple Genome-Wide Alignment Tool for Bacteria},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {249--260},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_25},
doi = {10.1007/978-3-642-38036-5\_25},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WiesekeLLM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZengLXZQDHX13,
author = {Xiangmiao Zeng and
Ke Liu and
Fangping Xie and
Ying Zhang and
Lei Qiao and
Cuihong Dai and
Aiju Hou and
Dechang Xu},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {A Simulation of Synthetic \emph{agr} System in \emph{E.coli}},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {76--86},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_11},
doi = {10.1007/978-3-642-38036-5\_11},
timestamp = {Sun, 04 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZengLXZQDHX13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhaoWWP13,
author = {Bihai Zhao and
Jianxin Wang and
Fang{-}Xiang Wu and
Yi Pan},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Construction of Uncertain Protein-Protein Interaction Networks and
Its Applications},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {286--297},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_28},
doi = {10.1007/978-3-642-38036-5\_28},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhaoWWP13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhengZ13,
author = {Yu Zheng and
Louxin Zhang},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {A Tool for Non-binary Tree Reconciliation},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {40--51},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_8},
doi = {10.1007/978-3-642-38036-5\_8},
timestamp = {Tue, 12 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhengZ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhengZ13a,
author = {Yu Zheng and
Louxin Zhang},
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Effect of Incomplete Lineage Sorting on Tree-Reconciliation-Based
Inference of Gene Duplication},
booktitle = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
pages = {261--272},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5\_26},
doi = {10.1007/978-3-642-38036-5\_26},
timestamp = {Tue, 12 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhengZ13a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2013,
editor = {Zhipeng Cai and
Oliver Eulenstein and
Daniel Janies and
Daniel Schwartz},
title = {Bioinformatics Research and Applications, 9th International Symposium,
{ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7875},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-38036-5},
doi = {10.1007/978-3-642-38036-5},
isbn = {978-3-642-38035-8},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/2013.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Al-TuraikiBM12,
author = {Isra Al{-}Turaiki and
Ghada Badr and
Hassan Mathkour},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {Trie-based Apriori Motif Discovery Approach},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {1--12},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_1},
doi = {10.1007/978-3-642-30191-9\_1},
timestamp = {Tue, 14 May 2019 10:00:51 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Al-TuraikiBM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BulteauJ12,
author = {Laurent Bulteau and
Minghui Jiang},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {Inapproximability of (1, 2)-Exemplar Distance},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {13--23},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_2},
doi = {10.1007/978-3-642-30191-9\_2},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BulteauJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/CatanzaroLH12,
author = {Daniele Catanzaro and
Martine Labb{\'{e}} and
Bjarni V. Halld{\'{o}}rsson},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {A Mixed Integer Programming Model for the Parsimonious Loss of Heterozygosity
Problem},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {24--35},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_3},
doi = {10.1007/978-3-642-30191-9\_3},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/CatanzaroLH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChenWSRCX12,
author = {Xi Chen and
Chen Wang and
Ayesha N. Shajahan and
Rebecca B. Riggins and
Robert Clarke and
Jianhua Xuan},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {Reconstruction of Transcription Regulatory Networks by Stability-Based
Network Component Analysis},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {36--47},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_4},
doi = {10.1007/978-3-642-30191-9\_4},
timestamp = {Thu, 19 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ChenWSRCX12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChristinatM12,
author = {Yann Christinat and
Bernard M. E. Moret},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {A Transcript Perspective on Evolution},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {48--59},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_5},
doi = {10.1007/978-3-642-30191-9\_5},
timestamp = {Sun, 04 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ChristinatM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/CrosbyW12,
author = {Ralph W. Crosby and
Tiffani L. Williams},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {A Fast Algorithm for Computing the Quartet Distance for Large Sets
of Evolutionary Trees},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {60--71},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_6},
doi = {10.1007/978-3-642-30191-9\_6},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/CrosbyW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/DamaschkeM12,
author = {Peter Damaschke and
Leonid Molokov},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {Error Propagation in Sparse Linear Systems with Peptide-Protein Incidence
Matrices},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {72--83},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_7},
doi = {10.1007/978-3-642-30191-9\_7},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/DamaschkeM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/DasGupta12,
author = {Bhaskar DasGupta},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {Models and Algorithmic Tools for Computational Processes in Cellular
Biology: Recent Developments and Future Directions - (Invited Keynote
Talk)},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {84--86},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_8},
doi = {10.1007/978-3-642-30191-9\_8},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/DasGupta12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/DeepakDF12,
author = {Akshay Deepak and
Jianrong Dong and
David Fern{\'{a}}ndez{-}Baca},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {Identifying Rogue Taxa through Reduced Consensus: NP-Hardness and
Exact Algorithms},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {87--98},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_9},
doi = {10.1007/978-3-642-30191-9\_9},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/DeepakDF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Gibas12,
author = {Cynthia Gibas},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {Analytics Approaches for the Era of 10, 000* Genomes *and Counting},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {99--101},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_10},
doi = {10.1007/978-3-642-30191-9\_10},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Gibas12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GoreckiBE12,
author = {Pawel G{\'{o}}recki and
J. Gordon Burleigh and
Oliver Eulenstein},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {{GTP} Supertrees from Unrooted Gene Trees: Linear Time Algorithms
for {NNI} Based Local Searches},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {102--114},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_11},
doi = {10.1007/978-3-642-30191-9\_11},
timestamp = {Fri, 17 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GoreckiBE12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GoreckiE12,
author = {Pawel G{\'{o}}recki and
Oliver Eulenstein},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {A Robinson-Foulds Measure to Compare Unrooted Trees with Rooted Trees},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {115--126},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_12},
doi = {10.1007/978-3-642-30191-9\_12},
timestamp = {Fri, 17 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GoreckiE12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GuoLW12,
author = {Fei Guo and
Shuai Cheng Li and
Lusheng Wang},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {P-Binder: {A} System for the Protein-Protein Binding Sites Identification},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {127--138},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_13},
doi = {10.1007/978-3-642-30191-9\_13},
timestamp = {Tue, 12 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GuoLW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Kirkpatrick12,
author = {Bonnie Kirkpatrick},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {Non-identifiable Pedigrees and a Bayesian Solution},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {139--152},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_14},
doi = {10.1007/978-3-642-30191-9\_14},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Kirkpatrick12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiCK12,
author = {Juntao Li and
Kwok Pui Choi and
R. Krishna Murthy Karuturi},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {Iterative Piecewise Linear Regression to Accurately Assess Statistical
Significance in Batch Confounded Differential Expression Analysis},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {153--164},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_15},
doi = {10.1007/978-3-642-30191-9\_15},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiCK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiCWZ12,
author = {Si Li and
Kwok Pui Choi and
Taoyang Wu and
Louxin Zhang},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {Reconstruction of Network Evolutionary History from Extant Network
Topology and Duplication History},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {165--176},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_16},
doi = {10.1007/978-3-642-30191-9\_16},
timestamp = {Mon, 04 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiCWZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MissirianHCF12,
author = {Victor Missirian and
Isabelle Henry and
Luca Comai and
Vladimir Filkov},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {{POPE:} Pipeline of Parentally-Biased Expression},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {177--188},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_17},
doi = {10.1007/978-3-642-30191-9\_17},
timestamp = {Sun, 04 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MissirianHCF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/NovakHLS12,
author = {Jir{\'{\i}} Nov{\'{a}}k and
David Hoksza and
Jakub Lokoc and
Tom{\'{a}}s Skopal},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {On Optimizing the Non-metric Similarity Search in Tandem Mass Spectra
by Clustering},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {189--200},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_18},
doi = {10.1007/978-3-642-30191-9\_18},
timestamp = {Sat, 18 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/NovakHLS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/OuangraouaSB12,
author = {A{\"{\i}}da Ouangraoua and
Krister M. Swenson and
Anne Bergeron},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {On the Comparison of Sets of Alternative Transcripts},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {201--212},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_19},
doi = {10.1007/978-3-642-30191-9\_19},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/OuangraouaSB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ParkN12,
author = {Hyun Jung Park and
Luay Nakhleh},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {{MURPAR:} {A} Fast Heuristic for Inferring Parsimonious Phylogenetic
Networks from Multiple Gene Trees},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {213--224},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_20},
doi = {10.1007/978-3-642-30191-9\_20},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ParkN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ReV12,
author = {Matteo Re and
Giorgio Valentini},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {Large Scale Ranking and Repositioning of Drugs with Respect to DrugBank
Therapeutic Categories},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {225--236},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_21},
doi = {10.1007/978-3-642-30191-9\_21},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ReV12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SenguptaMB12,
author = {Debarka Sengupta and
Ujjwal Maulik and
Sanghamitra Bandyopadhyay},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {Score Based Aggregation of microRNA Target Orderings},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {237--248},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_22},
doi = {10.1007/978-3-642-30191-9\_22},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SenguptaMB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Singh12,
author = {Ambuj K. Singh},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {Modeling Complex Diseases Using Discriminative Network Fragments -
(Invited Keynote Talk)},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {249},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_23},
doi = {10.1007/978-3-642-30191-9\_23},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Singh12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SubramanianSS12,
author = {Ayshwarya Subramanian and
Stanley Shackney and
Russell Schwartz},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {Novel Multi-sample Scheme for Inferring Phylogenetic Markers from
Whole Genome Tumor Profiles},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {250--262},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_24},
doi = {10.1007/978-3-642-30191-9\_24},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SubramanianSS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WeheBE12,
author = {Andr{\'{e}} Wehe and
J. Gordon Burleigh and
Oliver Eulenstein},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {Algorithms for Knowledge-Enhanced Supertrees},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {263--274},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_25},
doi = {10.1007/978-3-642-30191-9\_25},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WeheBE12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WienbrandtSS12,
author = {Lars Wienbrandt and
Daniel Siebert and
Manfred Schimmler},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {Improvement of BLASTp on the FPGA-Based High-Performance Computer
{RIVYERA}},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {275--286},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_26},
doi = {10.1007/978-3-642-30191-9\_26},
timestamp = {Fri, 02 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/WienbrandtSS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WylieZ12,
author = {Tim Wylie and
Binhai Zhu},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {A Polynomial Time Solution for Protein Chain Pair Simplification under
the Discrete Fr{\'{e}}chet Distance},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {287--298},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_27},
doi = {10.1007/978-3-642-30191-9\_27},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WylieZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YeasminS12,
author = {Rukhsana Yeasmin and
Steven Skiena},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {Designing {RNA} Secondary Structures in Coding Regions},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {299--314},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_28},
doi = {10.1007/978-3-642-30191-9\_28},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/YeasminS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YuLYZCHW12,
author = {Junjie Yu and
Henry Chi{-}Ming Leung and
Siu{-}Ming Yiu and
Yong Zhang and
Francis Y. L. Chin and
Nathan Hobbs and
Amy Y. X. Wang},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {Phylogenetic Tree Reconstruction with Protein Linkage},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {315--327},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_29},
doi = {10.1007/978-3-642-30191-9\_29},
timestamp = {Thu, 22 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/YuLYZCHW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Zhang12,
author = {Michael Q. Zhang},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {Computational Modeling of Mammalian Promoters - (Invited Keynote Talk)},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {330},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_31},
doi = {10.1007/978-3-642-30191-9\_31},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Zhang12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhangX12,
author = {Jingfen Zhang and
Dong Xu},
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {Protein Structure Prediction and Clustering Using {MUFOLD}},
booktitle = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
pages = {328--329},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9\_30},
doi = {10.1007/978-3-642-30191-9\_30},
timestamp = {Thu, 23 Sep 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhangX12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2012,
editor = {Leonidas G. Bleris and
Ion I. Mandoiu and
Russell Schwartz and
Jianxin Wang},
title = {Bioinformatics Research and Applications - 8th International Symposium,
{ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7292},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-30191-9},
doi = {10.1007/978-3-642-30191-9},
isbn = {978-3-642-30190-2},
timestamp = {Tue, 14 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/2012.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BadrT11,
author = {Ghada Badr and
Marcel Turcotte},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Component-Based Matching for Multiple Interacting {RNA} Sequences},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {73--86},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_11},
doi = {10.1007/978-3-642-21260-4\_11},
timestamp = {Fri, 21 Aug 2020 17:12:20 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BadrT11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChangVKE11,
author = {Wen{-}Chieh Chang and
Sudheer Vakati and
Roland Krause and
Oliver Eulenstein},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Mining Biological Interaction Networks Using Weighted Quasi-Bicliques},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {428--439},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_40},
doi = {10.1007/978-3-642-21260-4\_40},
timestamp = {Sat, 24 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ChangVKE11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChaudharyBE11,
author = {Ruchi Chaudhary and
J. Gordon Burleigh and
Oliver Eulenstein},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Algorithms for Rapid Error Correction for the Gene Duplication Problem},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {227--239},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_23},
doi = {10.1007/978-3-642-21260-4\_23},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ChaudharyBE11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChaudharyBF11,
author = {Ruchi Chaudhary and
J. Gordon Burleigh and
David Fern{\'{a}}ndez{-}Baca},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Fast Local Search for Unrooted Robinson-Foulds Supertrees},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {184--196},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_20},
doi = {10.1007/978-3-642-21260-4\_20},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ChaudharyBF11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/EblenPRL11,
author = {John D. Eblen and
Charles A. Phillips and
Gary L. Rogers and
Michael A. Langston},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {The Maximum Clique Enumeration Problem: Algorithms, Applications and
Implementations},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {306--319},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_30},
doi = {10.1007/978-3-642-21260-4\_30},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/EblenPRL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/FuPYG11,
author = {Yan Fu and
Rong Pan and
Qiang Yang and
Wen Gao},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Query-Adaptive Ranking with Support Vector Machines for Protein Homology
Prediction},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {320--331},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_31},
doi = {10.1007/978-3-642-21260-4\_31},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/FuPYG11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/FuZ11,
author = {Bin Fu and
Louxin Zhang},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {A Polynomial Algebra Method for Computing Exemplar Breakpoint Distance},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {297--305},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_29},
doi = {10.1007/978-3-642-21260-4\_29},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/FuZ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GoreckiE11,
author = {Pawel G{\'{o}}recki and
Oliver Eulenstein},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {A Linear Time Algorithm for Error-Corrected Reconciliation of Unrooted
Gene Trees},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {148--159},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_17},
doi = {10.1007/978-3-642-21260-4\_17},
timestamp = {Fri, 17 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GoreckiE11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GuoW11,
author = {Fei Guo and
Lusheng Wang},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Computing the Protein Binding Sites},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {25--36},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_7},
doi = {10.1007/978-3-642-21260-4\_7},
timestamp = {Tue, 12 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GuoW11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HasegawaYNIM11,
author = {Takanori Hasegawa and
Rui Yamaguchi and
Masao Nagasaki and
Seiya Imoto and
Satoru Miyano},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Comprehensive Pharmacogenomic Pathway Screening by Data Assimilation},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {160--171},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_18},
doi = {10.1007/978-3-642-21260-4\_18},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HasegawaYNIM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HodgkinsonK11,
author = {Luqman Hodgkinson and
Richard M. Karp},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Algorithms to Detect Multiprotein Modularity Conserved during Evolution},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {111--122},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_14},
doi = {10.1007/978-3-642-21260-4\_14},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HodgkinsonK11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HokszaS11,
author = {David Hoksza and
Daniel Svozil},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {{SETTER} - {RNA} SEcondary sTructure-based TERtiary Structure Similarity
Algorithm},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {37--48},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_8},
doi = {10.1007/978-3-642-21260-4\_8},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HokszaS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HuBJ11,
author = {Pingzhao Hu and
Shelley B. Bull and
Hui Jiang},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Gene Network Modules-Based Liner Discriminant Analysis of Microarray
Gene Expression Data},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {286--296},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_28},
doi = {10.1007/978-3-642-21260-4\_28},
timestamp = {Sun, 04 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HuBJ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/JancuraMPM11,
author = {Pavol Jancura and
Eleftheria Mavridou and
Beatriz Pontes and
Elena Marchiori},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Describing the Orthology Signal in a {PPI} Network at a Functional,
Complex Level},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {209--226},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_22},
doi = {10.1007/978-3-642-21260-4\_22},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/JancuraMPM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/JayEZBPSVCL11,
author = {Jeremy J. Jay and
John D. Eblen and
Yun Zhang and
Mikael Benson and
Andy D. Perkins and
Arnold M. Saxton and
Brynn H. Voy and
Elissa J. Chesler and
Michael A. Langston},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {A Systematic Comparison of Genome Scale Clustering Algorithms - (Extended
Abstract)},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {416--427},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_39},
doi = {10.1007/978-3-642-21260-4\_39},
timestamp = {Mon, 08 Apr 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/JayEZBPSVCL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Jiang11,
author = {Jonathan Q. Jiang},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Multi-label Correlated Semi-supervised Learning for Protein Function
Prediction},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {368--379},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_35},
doi = {10.1007/978-3-642-21260-4\_35},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Jiang11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/KlemaHZT11,
author = {Jir{\'{\i}} Kl{\'{e}}ma and
Matej Holec and
Filip Zelezn{\'{y}} and
Jakub Tolar},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Comparative Evaluation of Set-Level Techniques in Microarray Classification},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {274--285},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_27},
doi = {10.1007/978-3-642-21260-4\_27},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/KlemaHZT11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LessaNGBW11,
author = {Felipe Lessa and
Daniele Martins Neto and
K{\'{a}}tia Guimar{\~{a}}es and
Marcelo M. Brigido and
Maria Em{\'{\i}}lia Telles Walter},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Regene: Automatic Construction of a Multiple Component Dirichlet Mixture
Priors Covariance Model to Identify Non-coding {RNA}},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {380--391},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_36},
doi = {10.1007/978-3-642-21260-4\_36},
timestamp = {Tue, 02 Mar 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LessaNGBW11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiHYZ11,
author = {Chaojun Li and
Jieyue He and
Baoliu Ye and
Wei Zhong},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {A Novel Core-Attachment Based Greedy Search Method for Mining Functional
Modules in Protein Interaction Networks},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {332--343},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_32},
doi = {10.1007/978-3-642-21260-4\_32},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiHYZ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiSLRBS11,
author = {Hui Li and
Lauren Scott and
Chunmei Liu and
Mugizi Robert Rwebangira and
Legand Burge and
William M. Southerland},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Rapid and Accurate Generation of Peptide Sequence Tags with a Graph
Search Approach},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {253--261},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_25},
doi = {10.1007/978-3-642-21260-4\_25},
timestamp = {Thu, 31 Oct 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LiSLRBS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LinBE11,
author = {Harris T. Lin and
J. Gordon Burleigh and
Oliver Eulenstein},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {The Deep Coalescence Consensus Tree Problem is Pareto on Clusters},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {172--183},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_19},
doi = {10.1007/978-3-642-21260-4\_19},
timestamp = {Thu, 15 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LinBE11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LinRM11,
author = {Yu Lin and
Vaibhav Rajan and
Bernard M. E. Moret},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {A Metric for Phylogenetic Trees Based on Matching},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {197--208},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_21},
doi = {10.1007/978-3-642-21260-4\_21},
timestamp = {Tue, 31 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LinRM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiuCHT11,
author = {Yu{-}Cheng Liu and
Po{-}I Chiu and
Hsuan{-}Cheng Huang and
Vincent S. Tseng},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Prediction of Essential Genes by Mining Gene Ontology Semantics},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {49--60},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_9},
doi = {10.1007/978-3-642-21260-4\_9},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiuCHT11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ManuchPG11,
author = {J{\'{a}}n Manuch and
Murray Patterson and
Arvind Gupta},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Towards a Characterisation of the Generalised Cladistic Character
Compatibility Problem for Non-branching Character Trees},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {440--451},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_41},
doi = {10.1007/978-3-642-21260-4\_41},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ManuchPG11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Moret11,
author = {Bernard M. E. Moret},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Phylogenetic Analysis of Whole Genomes - (Keynote Talk)},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {4--7},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_3},
doi = {10.1007/978-3-642-21260-4\_3},
timestamp = {Sun, 04 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Moret11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MozhayskiyT11,
author = {Vadim Mozhayskiy and
Ilias Tagkopoulos},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {\emph{In Silico} Evolution of Multi-scale Microbial Systems in the
Presence of Mobile Genetic Elements and Horizontal Gene Transfer},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {262--273},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_26},
doi = {10.1007/978-3-642-21260-4\_26},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MozhayskiyT11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/NicolaeM11,
author = {Marius Nicolae and
Ion I. Mandoiu},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Accurate Estimation of Gene Expression Levels from {DGE} Sequencing
Data},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {392--403},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_37},
doi = {10.1007/978-3-642-21260-4\_37},
timestamp = {Sun, 04 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/NicolaeM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/RenWLWL11,
author = {Jun Ren and
Jianxin Wang and
Min Li and
Huan Wang and
Binbin Liu},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Prediction of Essential Proteins by Integration of {PPI} Network Topology
and Protein Complexes Information},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {12--24},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_6},
doi = {10.1007/978-3-642-21260-4\_6},
timestamp = {Fri, 21 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/RenWLWL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Sankoff11,
author = {David Sankoff},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {OMG! Orthologs for Multiple Genomes - Competing Formulations - (Keynote
Talk)},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {2--3},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_2},
doi = {10.1007/978-3-642-21260-4\_2},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Sankoff11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Schwartz11,
author = {Russell Schwartz},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Phylogenetics of Heterogeneous Samples - (Keynote Talk)},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {1},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_1},
doi = {10.1007/978-3-642-21260-4\_1},
timestamp = {Tue, 26 Jun 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Schwartz11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SwensonCPS11,
author = {Krister M. Swenson and
Eric C. H. Chen and
Nicholas D. Pattengale and
David Sankoff},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {The Kernel of Maximum Agreement Subtrees},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {123--135},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_15},
doi = {10.1007/978-3-642-21260-4\_15},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SwensonCPS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SzaboovaKEZT11,
author = {Andrea Szab{\'{o}}ov{\'{a}} and
Ondrej Kuzelka and
Sergio Morales E. and
Filip Zelezn{\'{y}} and
Jakub Tolar},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Prediction of DNA-Binding Propensity of Proteins by the Ball-Histogram
Method},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {358--367},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_34},
doi = {10.1007/978-3-642-21260-4\_34},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SzaboovaKEZT11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/TangK11,
author = {Yi{-}Tsung Tang and
Hung{-}Yu Kao},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {TransDomain: {A} Transitive Domain-Based Method in Protein-Protein
Interaction Prediction},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {240--252},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_24},
doi = {10.1007/978-3-642-21260-4\_24},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/TangK11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WanZCL11,
author = {Xiaohua Wan and
Fa Zhang and
Qi Chu and
Zhiyong Liu},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {High-Performance Blob-Based Iterative Reconstruction of Electron Tomography
on Multi-GPUs},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {61--72},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_10},
doi = {10.1007/978-3-642-21260-4\_10},
timestamp = {Thu, 19 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/WanZCL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangFBLC11,
author = {Han Wang and
John Fazekas and
Matthew Booth and
Qi Liu and
Dongsheng Che},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {An Integrative Approach for Genomic Island Prediction in Prokaryotic
Genomes},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {404--415},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_38},
doi = {10.1007/978-3-642-21260-4\_38},
timestamp = {Wed, 18 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WangFBLC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangLWP11,
author = {Huan Wang and
Min Li and
Jianxin Wang and
Yi Pan},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {A New Method for Identifying Essential Proteins Based on Edge Clustering
Coefficient},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {87--98},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_12},
doi = {10.1007/978-3-642-21260-4\_12},
timestamp = {Fri, 21 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WangLWP11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Wei11,
author = {Liping Wei},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Genetic and Pharmacogenetic Studies of Neuropsychiatric Disorders:
Increasingly Critical Roles of Bioinformatics Research and Applications
- (Keynote Talk)},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {8--10},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_4},
doi = {10.1007/978-3-642-21260-4\_4},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Wei11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Xing11,
author = {Eric P. Xing},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Genome-Phenome Association Analysis of Complex Diseases a Structured
Sparse Regression Approach - (Keynote Talk)},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {11},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_5},
doi = {10.1007/978-3-642-21260-4\_5},
timestamp = {Tue, 26 Jun 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Xing11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YangC11,
author = {Jianyi Yang and
Xin Chen},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {A Consensus Approach to Predicting Protein Contact Map via Logistic
Regression},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {136--147},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_16},
doi = {10.1007/978-3-642-21260-4\_16},
timestamp = {Mon, 25 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/YangC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhangM11,
author = {Xiuwei Zhang and
Bernard M. E. Moret},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {ProPhyC: {A} Probabilistic Phylogenetic Model for Refining Regulatory
Networks},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {344--357},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_33},
doi = {10.1007/978-3-642-21260-4\_33},
timestamp = {Sun, 04 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhangM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhengS11,
author = {Chunfang Zheng and
David Sankoff},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Gene Order in Rosid Phylogeny, Inferred from Pairwise Syntenies among
Extant Genomes},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {99--110},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_13},
doi = {10.1007/978-3-642-21260-4\_13},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhengS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2011,
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4},
doi = {10.1007/978-3-642-21260-4},
isbn = {978-3-642-21259-8},
timestamp = {Fri, 21 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/2011.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Barbacioru10,
author = {Catalin C. Barbacioru},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Tracing the Early Cell Divisions of Mouse Embryos by Single Cell RNA-Seq},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {1},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_1},
doi = {10.1007/978-3-642-13078-6\_1},
timestamp = {Tue, 14 May 2019 10:00:51 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Barbacioru10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Berman10,
author = {Piotr Berman},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Successes and Failures of Elegant Algorithms in Computational Biology},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {2},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_2},
doi = {10.1007/978-3-642-13078-6\_2},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Berman10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BlinovRSM10,
author = {Michael L. Blinov and
Oliver Ruebenacker and
James C. Schaff and
Ion I. Moraru},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Modeling without Borders: Creating and Annotating VCell Models Using
the Web},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {3--17},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_3},
doi = {10.1007/978-3-642-13078-6\_3},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/BlinovRSM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/DanielsKCM10,
author = {Noah M. Daniels and
Anoop Kumar and
Lenore Cowen and
Matthew Menke},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Touring Protein Space with Matt},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {18--28},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_4},
doi = {10.1007/978-3-642-13078-6\_4},
timestamp = {Thu, 15 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/DanielsKCM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/DoanE10,
author = {Duong Dai Doan and
Patricia A. Evans},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Fixed-Parameter Algorithm for General Pedigrees with a Single Pair
of Sites},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {29--37},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_5},
doi = {10.1007/978-3-642-13078-6\_5},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/DoanE10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/EhlerRZBBCB10,
author = {Martin Ehler and
Vinodh N. Rajapakse and
Barry Zeeberg and
Brian P. Brooks and
Jacob D. Brown and
Wojciech Czaja and
Robert F. Bonner},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Analysis of Temporal-spatial Co-variation within Gene Expression Microarray
Data in an Organogenesis Model},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {38--49},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_6},
doi = {10.1007/978-3-642-13078-6\_6},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/EhlerRZBBCB10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/FerraroPPR10,
author = {Nicola Ferraro and
Luigi Palopoli and
Simona Panni and
Simona E. Rombo},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {"Master-Slave" Biological Network Alignment},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {215--229},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_24},
doi = {10.1007/978-3-642-13078-6\_24},
timestamp = {Mon, 18 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/FerraroPPR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Gerstein10,
author = {Mark B. Gerstein},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Human Genome Annotation},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {50--51},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_7},
doi = {10.1007/978-3-642-13078-6\_7},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Gerstein10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GyselG10,
author = {Rob Gysel and
Dan Gusfield},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Extensions and Improvements to the Chordal Graph Approach to the Multi-state
Perfect Phylogeny Problem},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {52--60},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_8},
doi = {10.1007/978-3-642-13078-6\_8},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GyselG10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HigaLH10,
author = {Carlos H. A. Higa and
Vitor H. P. Louzada and
Ronaldo Fumio Hashimoto},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Analysis of Gene Interactions Using Restricted Boolean Networks and
Time-Series Data},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {61--76},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_9},
doi = {10.1007/978-3-642-13078-6\_9},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/HigaLH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/KimS10,
author = {Jay W. Kim and
Rahul Singh},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Residue Contexts: Non-sequential Protein Structure Alignment Using
Structural and Biochemical Features},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {77--88},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_10},
doi = {10.1007/978-3-642-13078-6\_10},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/KimS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiWWP10,
author = {Min Li and
Jianxin Wang and
Huan Wang and
Yi Pan},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Essential Proteins Discovery from Weighted Protein Interaction Networks},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {89--100},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_11},
doi = {10.1007/978-3-642-13078-6\_11},
timestamp = {Fri, 21 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiWWP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiZELM10,
author = {Juntao Li and
Lei Zhu and
Majid Eshaghi and
Jianhua Liu and
Karuturi R. Krishna Murthy},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Deciphering Transcription Factor Binding Patterns from Genome-Wide
High Density ChIP-chip Tiling Array Data},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {230--240},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_25},
doi = {10.1007/978-3-642-13078-6\_25},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiZELM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiuP10,
author = {Bo Liu and
Mihai Pop},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Identifying Differentially Abundant Metabolic Pathways in Metagenomic
Datasets},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {101--112},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_12},
doi = {10.1007/978-3-642-13078-6\_12},
timestamp = {Wed, 17 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiuP10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MatthewsSW10,
author = {Suzanne J. Matthews and
Seung{-}Jin Sul and
Tiffani L. Williams},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {A Novel Approach for Compressing Phylogenetic Trees},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {113--124},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_13},
doi = {10.1007/978-3-642-13078-6\_13},
timestamp = {Thu, 12 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MatthewsSW10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Ovcharenko10,
author = {Ivan Ovcharenko},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Structure of Proximal and Distant Regulatory Elements in the Human
Genome},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {125},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_14},
doi = {10.1007/978-3-642-13078-6\_14},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Ovcharenko10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Parida10,
author = {Laxmi Parida},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Combinatorics in Recombinational Population Genomics},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {126--127},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_15},
doi = {10.1007/978-3-642-13078-6\_15},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Parida10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/PattengaleSM10,
author = {Nicholas D. Pattengale and
Krister M. Swenson and
Bernard M. E. Moret},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Uncovering Hidden Phylogenetic Consensus},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {128--139},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_16},
doi = {10.1007/978-3-642-13078-6\_16},
timestamp = {Sun, 04 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/PattengaleSM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/RenWCLC10,
author = {Jun Ren and
Jianxin Wang and
Jianer Chen and
Min Li and
Gang Chen},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {An Agglomerate Algorithm for Mining Overlapping and Hierarchical Functional
Modules in Protein Interaction Networks},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {140--151},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_17},
doi = {10.1007/978-3-642-13078-6\_17},
timestamp = {Fri, 21 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/RenWCLC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ShibberuHL10,
author = {Yosi Shibberu and
Allen Holder and
Kyla Lutz},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Fast Protein Structure Alignment},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {152--165},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_18},
doi = {10.1007/978-3-642-13078-6\_18},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ShibberuHL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Singh10,
author = {Mona Singh},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Predicting and Analyzing Cellular Networks},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {166},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_19},
doi = {10.1007/978-3-642-13078-6\_19},
timestamp = {Tue, 30 Oct 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/Singh10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/TsaiBRS10,
author = {Ming{-}Chi Tsai and
Guy E. Blelloch and
R. Ravi and
Russell Schwartz},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {A Consensus Tree Approach for Reconstructing Human Evolutionary History
and Detecting Population Substructure},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {167--178},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_20},
doi = {10.1007/978-3-642-13078-6\_20},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/TsaiBRS10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WiedenhoeftKE10,
author = {John Wiedenhoeft and
Roland Krause and
Oliver Eulenstein},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Inferring Evolutionary Scenarios for Protein Domain Compositions},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {179--190},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_21},
doi = {10.1007/978-3-642-13078-6\_21},
timestamp = {Sat, 24 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/WiedenhoeftKE10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WongCLY10,
author = {Thomas K. F. Wong and
Brenda W. Y. Cheung and
Tak Wah Lam and
Siu{-}Ming Yiu},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Local Structural Alignment of {RNA} with Affine Gap Model},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {191--202},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_22},
doi = {10.1007/978-3-642-13078-6\_22},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/WongCLY10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WuW10,
author = {Yufeng Wu and
Jiayin Wang},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Fast Computation of the Exact Hybridization Number of Two Phylogenetic
Trees},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {203--214},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_23},
doi = {10.1007/978-3-642-13078-6\_23},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WuW10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhangW10,
author = {Liqing Zhang and
Layne T. Watson},
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {The Expected Fitness Cost of a Mutation Fixation under the One-Dimensional
Fisher Model},
booktitle = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
pages = {241--252},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6\_26},
doi = {10.1007/978-3-642-13078-6\_26},
timestamp = {Tue, 26 Mar 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ZhangW10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2010,
editor = {Mark Borodovsky and
Johann Peter Gogarten and
Teresa M. Przytycka and
Sanguthevar Rajasekaran},
title = {Bioinformatics Research and Applications, 6th International Symposium,
{ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6053},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13078-6},
doi = {10.1007/978-3-642-13078-6},
isbn = {978-3-642-13077-9},
timestamp = {Tue, 14 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/2010.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Abu-halawehH09,
author = {Na'el Abu{-}Halaweh and
Robert W. Harrison},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Prediction and Classification of Real and Pseudo MicroRNA Precursors
via Data Fuzzification and Fuzzy Decision Trees},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {323--334},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_31},
doi = {10.1007/978-3-642-01551-9\_31},
timestamp = {Fri, 24 Mar 2023 16:31:04 +0100},
biburl = {https://dblp.org/rec/conf/isbra/Abu-halawehH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BanhalmiBK09,
author = {Andr{\'{a}}s B{\'{a}}nhalmi and
R{\'{o}}bert Busa{-}Fekete and
Bal{\'{a}}zs K{\'{e}}gl},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {A One-Class Classification Approach for Protein Sequences and Structures},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {310--322},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_30},
doi = {10.1007/978-3-642-01551-9\_30},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BanhalmiBK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BaoB09,
author = {Lichen Bao and
Sergey Bereg},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Counting Faces in Split Networks},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {112--123},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_12},
doi = {10.1007/978-3-642-01551-9\_12},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BaoB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BlinSV09,
author = {Guillaume Blin and
Florian Sikora and
St{\'{e}}phane Vialette},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Querying Protein-Protein Interaction Networks},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {52--62},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_6},
doi = {10.1007/978-3-642-01551-9\_6},
timestamp = {Sun, 04 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BlinSV09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BonizzoniVDPR09,
author = {Paola Bonizzoni and
Gianluca Della Vedova and
Riccardo Dondi and
Yuri Pirola and
Romeo Rizzi},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Pure Parsimony Xor Haplotyping},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {186--197},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_19},
doi = {10.1007/978-3-642-01551-9\_19},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BonizzoniVDPR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GelfandKKLMRRRV09,
author = {Mikhail S. Gelfand and
Alexei E. Kazakov and
Yuri D. Korostelev and
Olga N. Laikova and
Andrey A. Mironov and
Aleksandra B. Rakhmaninova and
Dmitry A. Ravcheev and
Dmitry A. Rodionov and
Alexei G. Vitreschak},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Evolution of Regulatory Systems in Bacteria (Invited Keynote Talk)},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {1--4},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_1},
doi = {10.1007/978-3-642-01551-9\_1},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GelfandKKLMRRRV09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GremalschiAAZ09,
author = {Stefan Gremalschi and
Gulsah Altun and
Irina Astrovskaya and
Alexander Zelikovsky},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Mean Square Residue Biclustering with Missing Data and Row Inversions},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {28--39},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_4},
doi = {10.1007/978-3-642-01551-9\_4},
timestamp = {Sun, 04 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GremalschiAAZ09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HayesL09,
author = {Matthew Hayes and
Jing Li},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {A Linear-Time Algorithm for Analyzing Array {CGH} Data Using Log Ratio
Triangulation},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {248--259},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_25},
doi = {10.1007/978-3-642-01551-9\_25},
timestamp = {Fri, 02 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/HayesL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HolderL09,
author = {Allen Holder and
Thomas M. Langley},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {A Decomposition of the Pure Parsimony Haplotyping Problem},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {198--208},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_20},
doi = {10.1007/978-3-642-01551-9\_20},
timestamp = {Mon, 05 Aug 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HolderL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HolecZKT09,
author = {Matej Holec and
Filip Zelezn{\'{y}} and
Jir{\'{\i}} Kl{\'{e}}ma and
Jakub Tolar},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Integrating Multiple-Platform Expression Data through Gene Set Features},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {5--17},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_2},
doi = {10.1007/978-3-642-01551-9\_2},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HolecZKT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HowardSH09,
author = {Brian E. Howard and
Beate Sick and
Steffen Heber},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Practical Quality Assessment of Microarray Data by Simulation of Differential
Gene Expression},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {18--27},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_3},
doi = {10.1007/978-3-642-01551-9\_3},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HowardSH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Jimenez-MontanoH09,
author = {Miguel A. Jim{\'{e}}nez{-}Monta{\~{n}}o and
Matthew He},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Irreplaceable Amino Acids and Reduced Alphabets in Short-Term and
Directed Protein Evolution},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {297--309},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_29},
doi = {10.1007/978-3-642-01551-9\_29},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Jimenez-MontanoH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/KimZHH09,
author = {Jihye Kim and
Sihui Zhao and
Brian E. Howard and
Steffen Heber},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Mining of cis-Regulatory Motifs Associated with Tissue-Specific Alternative
Splicing},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {260--271},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_26},
doi = {10.1007/978-3-642-01551-9\_26},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/KimZHH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Kister09,
author = {Alexander Kister},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Relationship between Amino Acids Sequences and Protein Structures:
Folding Patterns and Sequence Patterns},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {124--134},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_13},
doi = {10.1007/978-3-642-01551-9\_13},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Kister09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/KundetiR09,
author = {Vamsi Kundeti and
Sanguthevar Rajasekaran},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Efficient Algorithms for Self Assembling Triangular and Other Nano
Structures},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {148--158},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_15},
doi = {10.1007/978-3-642-01551-9\_15},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/KundetiR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LarsenD09,
author = {Peter E. Larsen and
Yang Dai},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Using Gene Expression Modeling to Determine Biological Relevance of
Putative Regulatory Networks},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {40--51},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_5},
doi = {10.1007/978-3-642-01551-9\_5},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LarsenD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiWCP09,
author = {Min Li and
Jianxin Wang and
Jianer Chen and
Yi Pan},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Hierarchical Organization of Functional Modules in Weighted Protein
Interaction Networks Using Clustering Coefficient},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {75--86},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_8},
doi = {10.1007/978-3-642-01551-9\_8},
timestamp = {Fri, 21 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiWCP09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiYLELM09,
author = {Juntao Li and
Fajrian Yunus and
Zhu Lei and
Majid Eshaghi and
Jianhua Liu and
Karuturi R. Krishna Murthy},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Modeling and Visualizing Heterogeneity of Spatial Patterns of Protein-DNA
Interaction from High-Density Chromatin Precipitation Mapping Data},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {236--247},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_24},
doi = {10.1007/978-3-642-01551-9\_24},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiYLELM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MunozS09,
author = {Adriana Mu{\~{n}}oz and
David Sankoff},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Rearrangement Phylogeny of Genomes in Contig Form},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {160--172},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_17},
doi = {10.1007/978-3-642-01551-9\_17},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MunozS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/OuangraouaBMTC09,
author = {A{\"{\i}}da Ouangraoua and
Fr{\'{e}}d{\'{e}}ric Boyer and
Andrew W. McPherson and
Eric Tannier and
C{\'{e}}dric Chauve},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Prediction of Contiguous Regions in the Amniote Ancestral Genome},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {173--185},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_18},
doi = {10.1007/978-3-642-01551-9\_18},
timestamp = {Thu, 10 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/OuangraouaBMTC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/PasaniucKM09,
author = {Bogdan Pasaniuc and
Justin Kennedy and
Ion I. Mandoiu},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Imputation-Based Local Ancestry Inference in Admixed Populations},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {221--233},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_22},
doi = {10.1007/978-3-642-01551-9\_22},
timestamp = {Sun, 04 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/PasaniucKM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/RajasekaranSA09,
author = {Sanguthevar Rajasekaran and
Sahar Al Seesi and
Reda A. Ammar},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Improved Algorithms for Parsing ESLTAGs: {A} Grammatical Model Suitable
for {RNA} Pseudoknots},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {135--147},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_14},
doi = {10.1007/978-3-642-01551-9\_14},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/RajasekaranSA09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SulW09,
author = {Seung{-}Jin Sul and
Tiffani L. Williams},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {An Experimental Analysis of Consensus Tree Algorithms for Large-Scale
Tree Collections},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {100--111},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_11},
doi = {10.1007/978-3-642-01551-9\_11},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SulW09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SulimovaMMMK09,
author = {Valentina Sulimova and
Vadim Mottl and
Boris G. Mirkin and
Ilya B. Muchnik and
Casimir A. Kulikowski},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {A Class of Evolution-Based Kernels for Protein Homology Analysis:
{A} Generalization of the {PAM} Model},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {284--296},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_28},
doi = {10.1007/978-3-642-01551-9\_28},
timestamp = {Sun, 04 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SulimovaMMMK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Sunyaev09,
author = {Shamil R. Sunyaev},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Interpreting Population Sequencing Data},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {234--235},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_23},
doi = {10.1007/978-3-642-01551-9\_23},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Sunyaev09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Tsinoremas09,
author = {Nicholas F. Tsinoremas},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Bioinformatics Challenges in Translational Research},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {87},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_9},
doi = {10.1007/978-3-642-01551-9\_9},
timestamp = {Tue, 26 Jun 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Tsinoremas09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Ukkonen09,
author = {Esko Ukkonen},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Motif Construction from High-Throughput {SELEX} Data},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {159},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_16},
doi = {10.1007/978-3-642-01551-9\_16},
timestamp = {Tue, 26 Jun 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Ukkonen09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/VenkatachalamAJG09,
author = {Balaji Venkatachalam and
Jim Apple and
Katherine St. John and
Dan Gusfield},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Untangling Tanglegrams: Comparing Trees by Their Drawings},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {88--99},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_10},
doi = {10.1007/978-3-642-01551-9\_10},
timestamp = {Thu, 23 Sep 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/VenkatachalamAJG09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/VisvanathanPBTL09,
author = {Mahesh Visvanathan and
Bernhard Pfeifer and
Christian Baumgartner and
Bernhard Tilg and
Gerald H. Lushington},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Integrative Approach for Combining TNFa-NFkB Mathematical Model to
a Protein Interaction Connectivity Map},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {63--74},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_7},
doi = {10.1007/978-3-642-01551-9\_7},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/VisvanathanPBTL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Wu09,
author = {Yufeng Wu},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Exact Computation of Coalescent Likelihood under the Infinite Sites
Model},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {209--220},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_21},
doi = {10.1007/978-3-642-01551-9\_21},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Wu09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhaoKH09,
author = {Sihui Zhao and
Jihye Kim and
Steffen Heber},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Analysis of Cis-Regulatory Motifs in Cassette Exons by Incorporating
Exon Skipping Rates},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {272--283},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_27},
doi = {10.1007/978-3-642-01551-9\_27},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhaoKH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2009,
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9},
doi = {10.1007/978-3-642-01551-9},
isbn = {978-3-642-01550-2},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/2009.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AgrawalBH08,
author = {Ankit Agrawal and
Volker Brendel and
Xiaoqiu Huang},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Pairwise Statistical Significance Versus Database Statistical Significance
for Local Alignment of Protein Sequences},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {50--61},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_6},
doi = {10.1007/978-3-540-79450-9\_6},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AgrawalBH08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AgrawalGH08,
author = {Ankit Agrawal and
Arka P. Ghosh and
Xiaoqiu Huang},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Estimating Pairwise Statistical Significance of Protein Local Alignments
Using a Clustering-Classification Approach Based on Amino Acid Composition},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {62--73},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_7},
doi = {10.1007/978-3-540-79450-9\_7},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AgrawalGH08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Ahmad08,
author = {Shandar Ahmad},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Human Blood-Brain Differential Gene-Expression Correlates with Dipeptide
Frequency of Gene Products},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {504--508},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_47},
doi = {10.1007/978-3-540-79450-9\_47},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/Ahmad08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Allen08,
author = {Andrew S. Allen},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Invited Keynote Talk: Haplotype Sharing for Genome-Wide Case-Control
Association Studies},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {183},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_17},
doi = {10.1007/978-3-540-79450-9\_17},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Allen08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AlmasriLCD08,
author = {Eyad Almasri and
Peter E. Larsen and
Guanrao Chen and
Yang Dai},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Incorporating Literature Knowledge in Bayesian Network for Inferring
Gene Networks with Gene Expression Data},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {184--195},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_18},
doi = {10.1007/978-3-540-79450-9\_18},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AlmasriLCD08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ArnoldFDG08,
author = {Nikita Arnold and
Tema Fridman and
Robert M. Day and
Andrey Gorin},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Invited Keynote Talk: Computing P-Values for Peptide Identifications
in Mass Spectrometry},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {100--109},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_10},
doi = {10.1007/978-3-540-79450-9\_10},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ArnoldFDG08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BansalE08,
author = {Mukul S. Bansal and
Oliver Eulenstein},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {The Gene-Duplication Problem: Near-Linear Time Algorithms for {NNI}
Based Local Searches},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {14--25},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_3},
doi = {10.1007/978-3-540-79450-9\_3},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BansalE08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Buetow08,
author = {Kenneth H. Buetow},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Invited Keynote Talk: Quiet Revolution: Connectivity in the Cancer
Research Community},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {280},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_26},
doi = {10.1007/978-3-540-79450-9\_26},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Buetow08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/CampoDK08,
author = {David S. Campo and
Zoya Dimitrova and
Yuri Khudyakov},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Physicochemical Correlation between Amino Acid Sites in Short Sequences
under Selective Pressure},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {146--158},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_14},
doi = {10.1007/978-3-540-79450-9\_14},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/CampoDK08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/CheLJLX08,
author = {Dongsheng Che and
Guojun Li and
Shane T. Jensen and
Jun S. Liu and
Ying Xu},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {{PFP:} {A} Computational Framework for Phylogenetic Footprinting in
Prokaryotic Genomes},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {110--121},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_11},
doi = {10.1007/978-3-540-79450-9\_11},
timestamp = {Tue, 07 Nov 2017 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/CheLJLX08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/DeradoLNBNRV08,
author = {Gordana Derado and
Kichun Sky Lee and
Orietta Nicolis and
F. DuBois Bowman and
Mary Newell and
Fabrizio F. Rugger and
Brani Vidakovic},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Wavelet-Based 3-D Multifractal Spectrum with Applications in Breast
{MRI} Images},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {281--292},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_27},
doi = {10.1007/978-3-540-79450-9\_27},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/DeradoLNBNRV08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/EavensonJNMKY08,
author = {Matthew Eavenson and
Maciej Janik and
Shravya Nimmagadda and
John A. Miller and
Krys J. Kochut and
William S. York},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {GlycoBrowser: {A} Tool for Contextual Visualization of Biological
Data and Pathways Using Ontologies},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {305--316},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_29},
doi = {10.1007/978-3-540-79450-9\_29},
timestamp = {Thu, 11 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/EavensonJNMKY08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/FranciscoOF08,
author = {Alexandre P. Francisco and
Arlindo L. Oliveira and
Ana T. Freitas},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Identification of Transcription Factor Binding Sites in Promoter Regions
by Modularity Analysis of the Motif Co-occurrence Graph},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {220--231},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_21},
doi = {10.1007/978-3-540-79450-9\_21},
timestamp = {Sat, 24 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/FranciscoOF08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GengAC08,
author = {Huimin Geng and
Hesham H. Ali and
Wing C. Chan},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {A Hidden Markov Model Approach for Prediction of Genomic Alterations
from Gene Expression Profiling},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {414--425},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_38},
doi = {10.1007/978-3-540-79450-9\_38},
timestamp = {Fri, 11 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GengAC08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GongXCRWHC08,
author = {Ting Gong and
Jianhua Xuan and
Li Chen and
Rebecca B. Riggins and
Yue Joseph Wang and
Eric P. Hoffman and
Robert Clarke},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Sparse Decomposition of Gene Expression Data to Infer Transcriptional
Modules Guided by Motif Information},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {244--255},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_23},
doi = {10.1007/978-3-540-79450-9\_23},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GongXCRWHC08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GotoS08,
author = {Matthew A. Goto and
Eric J. Schwabe},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {A Dynamic Programming Algorithm for De Novo Peptide Sequencing with
Variable Scoring},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {171--182},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_16},
doi = {10.1007/978-3-540-79450-9\_16},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GotoS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GremalschiA08,
author = {Stefan Gremalschi and
Gulsah Altun},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Mean Squared Residue Based Biclustering Algorithms},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {232--243},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_22},
doi = {10.1007/978-3-540-79450-9\_22},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GremalschiA08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Hoksza08,
author = {David Hoksza},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Improved Alignment of Protein Sequences Based on Common Parts},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {87--99},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_9},
doi = {10.1007/978-3-540-79450-9\_9},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/Hoksza08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/KantLS08,
author = {Mariana Kant and
Maurice LeBon and
David Sankoff},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Hierarchical Clustering Using Constraints},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {2--13},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_2},
doi = {10.1007/978-3-540-79450-9\_2},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/KantLS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LamprechtMS08,
author = {Anna{-}Lena Lamprecht and
Tiziana Margaria and
Bernhard Steffen},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Seven Variations of an Alignment Workflow - An Illustration of Agile
Process Design and Management in Bio-jETI},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {445--456},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_42},
doi = {10.1007/978-3-540-79450-9\_42},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LamprechtMS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LaraDK08,
author = {James Lara and
Zoya Dimitrova and
Yuri Khudyakov},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Invited Keynote Talk: Integrative Viral Molecular Epidemiology: Hepatitis
{C} Virus Modeling},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {355--366},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_33},
doi = {10.1007/978-3-540-79450-9\_33},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LaraDK08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LarsenACD08,
author = {Peter E. Larsen and
Eyad Almasri and
Guanrao Chen and
Yang Dai},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Incorporating Knowledge of Topology Improves Reconstruction of Interaction
Networks from Microarray Data},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {434--443},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_40},
doi = {10.1007/978-3-540-79450-9\_40},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LarsenACD08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Leaver-FaySK08,
author = {Andrew Leaver{-}Fay and
Jack Snoeyink and
Brian Kuhlman},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {On-the-Fly Rotamer Pair Energy Evaluation in Protein Design},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {343--354},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_32},
doi = {10.1007/978-3-540-79450-9\_32},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/Leaver-FaySK08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiLK08,
author = {Juntao Li and
Jianhua Liu and
Karuturi R. Krishna Murthy},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Stepped Linear Regression to Accurately Assess Statistical Significance
in Batch Confounded Differential Expression Analysis},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {481--491},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_45},
doi = {10.1007/978-3-540-79450-9\_45},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiLK08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiRGSG08,
author = {Kejie Li and
Reazur Rahman and
Aditi Gupta and
Prasad Siddavatam and
Michael Gribskov},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Pattern Matching in {RNA} Structures},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {317--330},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_30},
doi = {10.1007/978-3-540-79450-9\_30},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LiRGSG08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiWC08,
author = {Min Li and
Jianxin Wang and
Jianer Chen},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {A Graph-Theoretic Method for Mining Overlapping Functional Modules
in Protein Interaction Networks},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {208--219},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_20},
doi = {10.1007/978-3-540-79450-9\_20},
timestamp = {Fri, 21 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiWC08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LoTB08,
author = {Shin{-}Lian Lo and
Kwok{-}Leung Tsui and
Benjamin Barwick},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Invited Keynote Talk: Data Mining and Statistical Methods for Analyzing
Microarray Experiments},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {444},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_41},
doi = {10.1007/978-3-540-79450-9\_41},
timestamp = {Fri, 02 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LoTB08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MartinezHR08,
author = {Alexandra Mart{\'{\i}}nez and
Joachim Hammer and
Sanjay Ranka},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {BioDQ: Data Quality Estimation and Management for Genomics Databases},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {469--480},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_44},
doi = {10.1007/978-3-540-79450-9\_44},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MartinezHR08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MassoHPV08,
author = {Majid Masso and
Kahkeshan Hijazi and
Nida Parvez and
Iosif I. Vaisman},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Computational Mutagenesis of E. coliLacRepressor: Insight into Structure-Function
Relationships and Accurate Prediction of Mutant Activity},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {390--401},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_36},
doi = {10.1007/978-3-540-79450-9\_36},
timestamp = {Sun, 04 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MassoHPV08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/NicolaeCWKS08,
author = {Dan L. Nicolae and
Omar De la Cruz and
William Wen and
Baoguan Ke and
Minsun Song},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Invited Keynote Talk: Set-Level Analyses for Genome-Wide Association
Data},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {1},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_1},
doi = {10.1007/978-3-540-79450-9\_1},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/NicolaeCWKS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/OrdogG08,
author = {Rafael {\"{O}}rd{\"{o}}g and
Vince Grolmusz},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Evaluating Genetic Algorithms in Protein-Ligand Docking},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {402--413},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_37},
doi = {10.1007/978-3-540-79450-9\_37},
timestamp = {Thu, 15 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/OrdogG08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ParkSS08,
author = {Yongjin Park and
Stanley Shackney and
Russell Schwartz},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Network-Based Inference of Cancer Progression from Microarray Data},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {268--279},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_25},
doi = {10.1007/978-3-540-79450-9\_25},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ParkSS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Politis08,
author = {Dimitris N. Politis},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Bagging Multiple Comparisons from Microarray Data},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {492--503},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_46},
doi = {10.1007/978-3-540-79450-9\_46},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Politis08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/QiuL08,
author = {Shibin Qiu and
Terran Lane},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Multiple Kernel Support Vector Regression for siRNA Efficacy Prediction},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {367--378},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_34},
doi = {10.1007/978-3-540-79450-9\_34},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/QiuL08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/StottsLR08,
author = {David Stotts and
Keith L. Lee and
Ivan Rusyn},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Supporting Computational Systems Science: Genomic Analysis Tool Federations
Using Aspects and {AOP}},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {457--468},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_43},
doi = {10.1007/978-3-540-79450-9\_43},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/StottsLR08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/TanTJZCK08,
author = {Qihua Tan and
Mads Thomassen and
Kirsten M. Jochumsen and
Jing Hua Zhao and
Kaare Christensen and
Torben Arvid Kruse},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Evolutionary Algorithm for Feature Subset Selection in Predicting
Tumor Outcomes Using Microarray Data},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {426--433},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_39},
doi = {10.1007/978-3-540-79450-9\_39},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/TanTJZCK08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/TreangenDRM08,
author = {Todd J. Treangen and
Aaron E. Darling and
Mark A. Ragan and
Xavier Messeguer},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Gapped Extension for Local Multiple Alignment of Interspersed {DNA}
Repeats},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {74--86},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_8},
doi = {10.1007/978-3-540-79450-9\_8},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/TreangenDRM08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangXCZWCH08,
author = {Chen Wang and
Jianhua Xuan and
Li Chen and
Po Zhao and
Yue Joseph Wang and
Robert Clarke and
Eric P. Hoffman},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Integrative Network Component Analysis for Regulatory Network Reconstruction},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {196--207},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_19},
doi = {10.1007/978-3-540-79450-9\_19},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WangXCZWCH08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WeiCBBSS08,
author = {Xintao Wei and
Lenore Cowen and
Carla E. Brodley and
Arthur Brady and
D. Sculley and
Donna K. Slonim},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {A Distance-Based Method for Detecting Horizontal Gene Transfer in
Whole Genomes},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {26--37},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_4},
doi = {10.1007/978-3-540-79450-9\_4},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WeiCBBSS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WestbrooksACKBZ08,
author = {Kelly Westbrooks and
Irina Astrovskaya and
David S. Campo and
Yuri Khudyakov and
Piotr Berman and
Alexander Zelikovsky},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {{HCV} Quasispecies Assembly Using Network Flows},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {159--170},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_15},
doi = {10.1007/978-3-540-79450-9\_15},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/WestbrooksACKBZ08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZaslavskyT08,
author = {Leonid Zaslavsky and
Tatiana A. Tatusova},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Accelerating the Neighbor-Joining Algorithm Using the Adaptive Bucket
Data Structure},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {122--133},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_12},
doi = {10.1007/978-3-540-79450-9\_12},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZaslavskyT08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZengC08,
author = {Qingguo Zeng and
Yunmei Chen},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Accurate Inverse Consistent Non-rigid Image Registration and Its Application
on Automatic Re-contouring},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {293--304},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_28},
doi = {10.1007/978-3-540-79450-9\_28},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZengC08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZengLYY08,
author = {Xue{-}Qiang Zeng and
Guo{-}Zheng Li and
Jack Y. Yang and
Mary Qu Yang},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {A Novel Metric for Redundant Gene Elimination Based on Discriminative
Contribution},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {256--267},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_24},
doi = {10.1007/978-3-540-79450-9\_24},
timestamp = {Fri, 13 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZengLYY08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Zheng08,
author = {Wei{-}Mou Zheng},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {The Use of a Conformational Alphabet for Fast Alignment of Protein
Structures},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {331--342},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_31},
doi = {10.1007/978-3-540-79450-9\_31},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Zheng08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhongCSHD08,
author = {Wei Zhong and
Rick Chow and
Richard Stolz and
Jieyue He and
Marsha Dowell},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Hierarchical Clustering Support Vector Machines for Classifying Type-2
Diabetes Patients},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {379--389},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_35},
doi = {10.1007/978-3-540-79450-9\_35},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhongCSHD08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhouCPW08,
author = {Tingting Zhou and
Keith C. C. Chan and
Yi Pan and
Zhenghua Wang},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {An Approach for Determining Evolutionary Distance in Network-Based
Phylogenetic Analysis},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {38--49},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_5},
doi = {10.1007/978-3-540-79450-9\_5},
timestamp = {Mon, 28 Aug 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhouCPW08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhuACS08,
author = {Qian Zhu and
Zaky Adam and
Vicky Choi and
David Sankoff},
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Generalized Gene Adjacencies, Graph Bandwidth and Clusters in Yeast
Evolution},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
pages = {134--145},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9\_13},
doi = {10.1007/978-3-540-79450-9\_13},
timestamp = {Sat, 26 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ZhuACS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2008,
editor = {Ion I. Mandoiu and
Raj Sunderraman and
Alexander Zelikovsky},
title = {Bioinformatics Research and Applications, Fourth International Symposium,
{ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4983},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-79450-9},
doi = {10.1007/978-3-540-79450-9},
isbn = {978-3-540-79449-3},
timestamp = {Tue, 14 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/2008.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/AltunHGHP07,
author = {Gulsah Altun and
Hae{-}Jin Hu and
Stefan Gremalschi and
Robert W. Harrison and
Yi Pan},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {A Feature Selection Algorithm Based on Graph Theory and Random Forests
for Protein Secondary Structure Prediction},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {590--600},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_54},
doi = {10.1007/978-3-540-72031-7\_54},
timestamp = {Tue, 14 May 2019 10:00:51 +0200},
biburl = {https://dblp.org/rec/conf/isbra/AltunHGHP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BallaR07,
author = {Sudha Balla and
Sanguthevar Rajasekaran},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Space and Time Efficient Algorithms to Discover Endogenous RNAi Patterns
in Complete Genome Data},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {260--269},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_24},
doi = {10.1007/978-3-540-72031-7\_24},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BallaR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BarbutiMM07,
author = {Roberto Barbuti and
Andrea Maggiolo{-}Schettini and
Paolo Milazzo},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Extending the Calculus of Looping Sequences to Model Protein Interaction
at the Domain Level},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {638--649},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_58},
doi = {10.1007/978-3-540-72031-7\_58},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BarbutiMM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BerntMM07,
author = {Matthias Bernt and
Daniel Merkle and
Martin Middendorf},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {A Fast and Exact Algorithm for the Perfect Reversal Median Problem},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {305--316},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_28},
doi = {10.1007/978-3-540-72031-7\_28},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BerntMM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Bi07,
author = {Chengpeng Bi},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Multiple Sequence Local Alignment Using Monte Carlo {EM} Algorithm},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {465--476},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_42},
doi = {10.1007/978-3-540-72031-7\_42},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Bi07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Borodovsky07,
author = {Mark Borodovsky},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Invited Talk: Ab Initio Gene Finding Engines: What Is Under the Hood},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {577},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_52},
doi = {10.1007/978-3-540-72031-7\_52},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Borodovsky07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BragaSST07,
author = {Mar{\'{\i}}lia D. V. Braga and
Marie{-}France Sagot and
C{\'{e}}line Scornavacca and
Eric Tannier},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {The Solution Space of Sorting by Reversals},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {293--304},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_27},
doi = {10.1007/978-3-540-72031-7\_27},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BragaSST07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BuendiaN07,
author = {Patricia Buendia and
Giri Narasimhan},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Searching for Recombinant Donors in a Phylogenetic Network of Serial
Samples},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {109--120},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_10},
doi = {10.1007/978-3-540-72031-7\_10},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BuendiaN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Busa-FeketeKB07,
author = {R{\'{o}}bert Busa{-}Fekete and
Andr{\'{a}}s Kocsor and
Csaba Bagyinka},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {A Multi-Stack Based Phylogenetic Tree Building Method},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {49--60},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_5},
doi = {10.1007/978-3-540-72031-7\_5},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Busa-FeketeKB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Calin-JagemanXPVK07,
author = {Robert J. Calin{-}Jageman and
Chao Xie and
Yi Pan and
Art Vandenberg and
Paul S. Katz},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {NEURONgrid: {A} Toolkit for Generating Parameter-Space Maps Using
{NEURON} in a Grid Environment},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {182--191},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_17},
doi = {10.1007/978-3-540-72031-7\_17},
timestamp = {Fri, 25 Aug 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Calin-JagemanXPVK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChangCHTLZWCP07,
author = {Margaret Dah{-}Tsyr Chang and
Hao{-}Teng Chang and
Rong{-}Yuan Huang and
Wen{-}Shyong Tzou and
Chih{-}Hong Liu and
Wei{-}Jun Zhung and
Hsien{-}Wei Wang and
Chun{-}Tien Chang and
Tun{-}Wen Pai},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {A Database for Prediction of Unique Peptide Motifs as Linear Epitopes},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {430--440},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_39},
doi = {10.1007/978-3-540-72031-7\_39},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ChangCHTLZWCP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChangKP07,
author = {Kung{-}Hua Chang and
Yong Kyun Kwon and
Douglas Stott Parker Jr.},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Finding Minimal Sets of Informative Genes in Microarray Data},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {227--236},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_21},
doi = {10.1007/978-3-540-72031-7\_21},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ChangKP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChenGHE07,
author = {Li Chen and
Dmitry B. Goldgof and
Lawrence O. Hall and
Steven Eschrich},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Noise-Based Feature Perturbation as a Selection Method for Microarray
Data},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {237--247},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_22},
doi = {10.1007/978-3-540-72031-7\_22},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ChenGHE07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChenZZH07,
author = {Xiujuan Chen and
Yichuan Zhao and
Yan{-}Qing Zhang and
Robert W. Harrison},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Combining {SVM} Classifiers Using Genetic Fuzzy Systems Based on {AUC}
for Gene Expression Data Analysis},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {496--505},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_45},
doi = {10.1007/978-3-540-72031-7\_45},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ChenZZH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChoiJKL07,
author = {Mun{-}Ho Choi and
In{-}Seon Jeong and
Seung{-}Ho Kang and
Hyeong{-}Seok Lim},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {An Efficient Algorithm for Finding Gene-Specific Probes for {DNA}
Microarrays},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {453--464},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_41},
doi = {10.1007/978-3-540-72031-7\_41},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ChoiJKL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/CohanKL07,
author = {Frederick Cohan and
Danny Krizanc and
Yun Lu},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Estimating Bacterial Diversity from Environmental {DNA:} {A} Maximum
Likelihood Approach},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {133--144},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_12},
doi = {10.1007/978-3-540-72031-7\_12},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/CohanKL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/DeradoBPNV07,
author = {Gordana Derado and
F. DuBois Bowman and
Rajan Patel and
Mary Newell and
Brani Vidakovic},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Wavelet Image Interpolation {(WII):} {A} Wavelet-Based Approach to
Enhancement of Digital Mammography Images},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {203--214},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_19},
doi = {10.1007/978-3-540-72031-7\_19},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/DeradoBPNV07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/FayyazKMK07,
author = {Mudassir Fayyaz and
Asifullah Khan and
Adnan Mujahid and
Alex Kavokin},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Using Multi Level Nearest Neighbor Classifiers for G-Protein Coupled
Receptor Sub-families Prediction},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {564--576},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_51},
doi = {10.1007/978-3-540-72031-7\_51},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/FayyazKMK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/FeiLPL07,
author = {Xubo Fei and
Shiyong Lu and
Horia F. Pop and
Lily R. Liang},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {{GFBA:} {A} Biclustering Algorithm for Discovering Value-Coherent
Biclusters},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {1--12},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_1},
doi = {10.1007/978-3-540-72031-7\_1},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/FeiLPL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/FuCPH07,
author = {Xuezheng Fu and
Bernard Chen and
Yi Pan and
Robert W. Harrison},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Statistical Estimate for the Size of the Protein Structural Vocabulary},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {530--538},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_48},
doi = {10.1007/978-3-540-72031-7\_48},
timestamp = {Wed, 14 Mar 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/FuCPH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GuptaMSZ07,
author = {Arvind Gupta and
J{\'{a}}n Manuch and
Ladislav Stacho and
Xiaohong Zhao},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Algorithm for Haplotype Inferring Via Galled-Tree Networks with Simple
Galls},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {121--132},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_11},
doi = {10.1007/978-3-540-72031-7\_11},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GuptaMSZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GuptaYIYM07,
author = {Pramod K. Gupta and
Ryo Yoshida and
Seiya Imoto and
Rui Yamaguchi and
Satoru Miyano},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Statistical Absolute Evaluation of Gene Ontology Terms with Gene Expression
Data},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {146--157},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_14},
doi = {10.1007/978-3-540-72031-7\_14},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GuptaYIYM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/He07,
author = {Dan He},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {A Novel Greedy Algorithm for the Minimum Common String Partition Problem},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {441--452},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_40},
doi = {10.1007/978-3-540-72031-7\_40},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/He07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HeathP07,
author = {Lenwood S. Heath and
Amrita Pati},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Genomic Signatures from {DNA} Word Graphs},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {317--328},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_29},
doi = {10.1007/978-3-540-72031-7\_29},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HeathP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/JiangMG07,
author = {Minghui Jiang and
Martin Mayne and
Joel Gillespie},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Delta: {A} Toolset for the Structural Analysis of Biological Sequences
on a 3D Triangular Lattice},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {518--529},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_47},
doi = {10.1007/978-3-540-72031-7\_47},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/JiangMG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/JinNST07,
author = {Guohua Jin and
Luay Nakhleh and
Sagi Snir and
Tamir Tuller},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {A New Linear-Time Heuristic Algorithm for Computing the Parsimony
Score of Phylogenetic Networks: Theoretical Bounds and Empirical Performance},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {61--72},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_6},
doi = {10.1007/978-3-540-72031-7\_6},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/JinNST07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/KimKH07,
author = {Hyunmin Kim and
Katherina J. Kechris and
Lawrence Hunter},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Mining Discriminative Distance Context of Transcription Factor Binding
Sites on ChIP Enriched Regions},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {338--349},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_31},
doi = {10.1007/978-3-540-72031-7\_31},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/KimKH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/KimP07,
author = {Hyunsoo Kim and
Haesun Park},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Cancer Class Discovery Using Non-negative Matrix Factorization Based
on Alternating Non-negativity-Constrained Least Squares},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {477--487},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_43},
doi = {10.1007/978-3-540-72031-7\_43},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/KimP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LawsonZ07,
author = {Mark J. Lawson and
Liqing Zhang},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {The Identification of Antisense Gene Pairs Through Available Software},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {372--381},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_34},
doi = {10.1007/978-3-540-72031-7\_34},
timestamp = {Tue, 26 Mar 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LawsonZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LeeRM07,
author = {George Lee and
Carlos Rodriguez and
Anant Madabhushi},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {An Empirical Comparison of Dimensionality Reduction Methods for Classifying
Gene and Protein Expression Datasets},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {170--181},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_16},
doi = {10.1007/978-3-540-72031-7\_16},
timestamp = {Wed, 25 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LeeRM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Li07,
author = {Ming Li},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Invited Talk: Modern Homology Search},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {145},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_13},
doi = {10.1007/978-3-540-72031-7\_13},
timestamp = {Tue, 30 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/Li07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiLM07,
author = {Juntao Li and
Jianhua Liu and
Karuturi R. Krishna Murthy},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Data-Driven Smoothness Enhanced Variance Ratio Test to Unearth Responsive
Genes in 0-Time Normalized Time-Course Microarray Data},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {25--36},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_3},
doi = {10.1007/978-3-540-72031-7\_3},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiLM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiaoL07,
author = {Chen Liao and
Shutao Li},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {A Support Vector Machine Ensemble for Cancer Classification Using
Gene Expression Data},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {488--495},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_44},
doi = {10.1007/978-3-540-72031-7\_44},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiaoL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LinLWHM07,
author = {Cui Lin and
Shiyong Lu and
Danqing Wu and
Jing Hua and
Otto Muzik},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Coclustering Based Parcellation of Human Brain Cortex Using Diffusion
Tensor {MRI}},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {539--550},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_49},
doi = {10.1007/978-3-540-72031-7\_49},
timestamp = {Fri, 18 Nov 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LinLWHM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Loganantharaj07,
author = {Raja Loganantharaj},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Extensions of Naive Bayes and Their Applications to Bioinformatics},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {282--292},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_26},
doi = {10.1007/978-3-540-72031-7\_26},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Loganantharaj07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MazloomBMSD07,
author = {Amin R. Mazloom and
Kalyan Basu and
Subhrangsu S. Mandal and
Mehran Sorourian and
Sajal K. Das},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {{DNA} Sites Buried in Nucleosome Become Accessible at Room Temperature:
{A} Discrete-Event-Simulation Based Modeling Approach},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {601--614},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_55},
doi = {10.1007/978-3-540-72031-7\_55},
timestamp = {Tue, 10 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MazloomBMSD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ShaikY07,
author = {Jahangheer S. Shaik and
Mohammed Yeasin},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Ranking Function Based on Higher Order Statistics {(RF-HOS)} for Two-Sample
Microarray Experiments},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {97--108},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_9},
doi = {10.1007/978-3-540-72031-7\_9},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ShaikY07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Smith07,
author = {Scott F. Smith},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {A Fast Approximate Covariance-Model-Based Database Search Method for
Non-coding {RNA}},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {270--281},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_25},
doi = {10.1007/978-3-540-72031-7\_25},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Smith07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SongD07,
author = {Dandan Song and
Zhidong Deng},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {A {BP-SCFG} Based Approach for {RNA} Secondary Structure Prediction
with Consecutive Bases Dependency and Their Relative Positions Information},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {506--517},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_46},
doi = {10.1007/978-3-540-72031-7\_46},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SongD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SparksBD07,
author = {Michael E. Sparks and
Volker Brendel and
Karin S. Dorman},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Markov Model Variants for Appraisal of Coding Potential in Plant {DNA}},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {394--405},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_36},
doi = {10.1007/978-3-540-72031-7\_36},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SparksBD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SridharLBRS07,
author = {Srinath Sridhar and
Fumei Lam and
Guy E. Blelloch and
R. Ravi and
Russell Schwartz},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Efficiently Finding the Most Parsimonious Phylogenetic Tree Via Linear
Programming},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {37--48},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_4},
doi = {10.1007/978-3-540-72031-7\_4},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SridharLBRS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/TanDAVKK07,
author = {Qihua Tan and
Jesper Dahlgaard and
Basem M. Abdallah and
Werner Vach and
Moustapha Kassem and
Torben Arvid Kruse},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {A Bootstrap Correspondence Analysis for Factorial Microarray Experiments
with Replications},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {73--84},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_7},
doi = {10.1007/978-3-540-72031-7\_7},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/TanDAVKK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/TeggeRSS07,
author = {Allison N. Tegge and
Sandra L. Rodriguez{-}Zas and
Jonathan V. Sweedler and
Bruce R. Southey},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Enhanced Prediction of Cleavage in Bovine Precursor Sequences},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {350--360},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_32},
doi = {10.1007/978-3-540-72031-7\_32},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/TeggeRSS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ThorvaldsenYF07,
author = {Steinar Thorvaldsen and
Elinor Ytterstad and
Tor Fl{\aa}},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Inferring Weak Adaptations and Selection Biases in Proteins from Composition
and Substitution Matrices},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {382--393},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_35},
doi = {10.1007/978-3-540-72031-7\_35},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ThorvaldsenYF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/TrajkovskiL07,
author = {Igor Trajkovski and
Nada Lavrac},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Efficient Generation of Biologically Relevant Enriched Gene Sets},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {248--259},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_23},
doi = {10.1007/978-3-540-72031-7\_23},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/TrajkovskiL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/VarshavskyHL07,
author = {Roy Varshavsky and
David Horn and
Michal Linial},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Clustering Algorithms Optimizer: {A} Framework for Large Datasets},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {85--96},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_8},
doi = {10.1007/978-3-540-72031-7\_8},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/VarshavskyHL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/VassuraMMLFC07,
author = {Marco Vassura and
Luciano Margara and
Filippo Medri and
Pietro di Lena and
Piero Fariselli and
Rita Casadio},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Reconstruction of 3D Structures from Protein Contact Maps},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {578--589},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_53},
doi = {10.1007/978-3-540-72031-7\_53},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/VassuraMMLFC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangSP07,
author = {Yanchao Wang and
Rajshekhar Sunderraman and
Piyaphol Phoungphol},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {High Level Programming Environment System for Protein Structure Data},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {215--226},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_20},
doi = {10.1007/978-3-540-72031-7\_20},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WangSP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Wu07,
author = {Fang{-}Xiang Wu},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Significance Analysis of Time-Course Gene Expression Profiles},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {13--24},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_2},
doi = {10.1007/978-3-540-72031-7\_2},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Wu07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WuL07,
author = {Shiquan Wu and
Jing Li},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Comparative Analysis of Gene-Coexpression Networks Across Species},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {615--626},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_56},
doi = {10.1007/978-3-540-72031-7\_56},
timestamp = {Wed, 12 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WuL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WuMOX07,
author = {Hongwei Wu and
Fenglou Mao and
Victor Olman and
Ying Xu},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {An Algorithm for Hierarchical Classification of Genes of Prokaryotic
Genomes},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {551--563},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_50},
doi = {10.1007/978-3-540-72031-7\_50},
timestamp = {Sun, 05 Nov 2017 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/WuMOX07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Yang07,
author = {Zheng Rong Yang},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Predicting Palmitoylation Sites Using a Regularised Bio-basis Function
Neural Network},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {406--417},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_37},
doi = {10.1007/978-3-540-72031-7\_37},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Yang07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YangE07,
author = {Mary Qu Yang and
Laura Elnitski},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Invited Talk: {A} Computational Study of Bidirectional Promoters in
the Human Genome},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {361--371},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_33},
doi = {10.1007/978-3-540-72031-7\_33},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/YangE07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YuHZG07,
author = {Hao Yu and
Minlie Huang and
Xiaoyan Zhu and
Yabin Guo},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {A Novel Kernel-Based Approach for Predicting Binding Peptides for
{HLA} Class {II} Molecules},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {418--429},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_38},
doi = {10.1007/978-3-540-72031-7\_38},
timestamp = {Tue, 03 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/YuHZG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZaslavskyBT07,
author = {Leonid Zaslavsky and
Yiming Bao and
Tatiana A. Tatusova},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {An Adaptive Resolution Tree Visualization of Large Influenza Virus
Sequence Datasets},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {192--202},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_18},
doi = {10.1007/978-3-540-72031-7\_18},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZaslavskyBT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZengN07,
author = {Erliang Zeng and
Giri Narasimhan},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Enhancing Motif Refinement by Incorporating Comparative Genomics Data},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {329--337},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_30},
doi = {10.1007/978-3-540-72031-7\_30},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZengN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhaoCC07,
author = {Jizhen Zhao and
Dongsheng Che and
Liming Cai},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Comparative Pathway Prediction Via Unified Graph Modeling of Genomic
Structure Information},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {627--637},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_57},
doi = {10.1007/978-3-540-72031-7\_57},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhaoCC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZoppisMAMM07,
author = {Italo Zoppis and
Daniele Merico and
Marco Antoniotti and
Bud Mishra and
Giancarlo Mauri},
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Discovering Relations Among GO-Annotated Clusters by Graph Kernel
Methods},
booktitle = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
pages = {158--169},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7\_15},
doi = {10.1007/978-3-540-72031-7\_15},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZoppisMAMM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2007,
editor = {Ion I. Mandoiu and
Alexander Zelikovsky},
title = {Bioinformatics Research and Applications, Third International Symposium,
{ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4463},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72031-7},
doi = {10.1007/978-3-540-72031-7},
isbn = {978-3-540-72030-0},
timestamp = {Tue, 14 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/2007.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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