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Stephen M. Smith 0001
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Publications
- 2021
- [j124]Nicola K. Dinsdale, Emma Bluemke, Stephen M. Smith
, Zobair Arya, Diego Vidaurre
, Mark Jenkinson, Ana I. L. Namburete
:
Learning patterns of the ageing brain in MRI using deep convolutional networks. NeuroImage 224: 117401 (2021) - [i2]Nicola K. Dinsdale, Emma Bluemke, Vaanathi Sundaresan, Mark Jenkinson, Stephen M. Smith, Ana I. L. Namburete:
Challenges for machine learning in clinical translation of big data imaging studies. CoRR abs/2107.05630 (2021) - 2019
- [j111]Luke Baxter
, Sean P. Fitzgibbon
, Fiona Moultrie
, Sezgi Goksan
, Mark Jenkinson, Stephen M. Smith
, Jesper L. R. Andersson, Eugene P. Duff, Rebeccah Slater:
Optimising neonatal fMRI data analysis: Design and validation of an extended dHCP preprocessing pipeline to characterise noxious-evoked brain activity in infants. NeuroImage 186: 286-300 (2019) - 2018
- [j106]Fidel Alfaro-Almagro
, Mark Jenkinson, Neal K. Bangerter, Jesper L. R. Andersson, Ludovica Griffanti
, Gwenaëlle Douaud, Stamatios N. Sotiropoulos
, Saâd Jbabdi, Moisés Hernández-Fernández, Emmanuel Vallée, Diego Vidaurre
, Matthew A. Webster, Paul McCarthy, Christopher Rorden, Alessandro Daducci, Daniel C. Alexander
, Hui Zhang
, Iulius Dragonu, Paul M. Matthews, Karla L. Miller
, Stephen M. Smith
:
Image processing and Quality Control for the first 10, 000 brain imaging datasets from UK Biobank. NeuroImage 166: 400-424 (2018) - 2016
- [j93]Matthew F. Glasser, Timothy S. Coalson, Emma C. Robinson
, Carl D. Hacker, John W. Harwell, Essa Yacoub, Kâmil Ugurbil, Jesper L. R. Andersson, Christian F. Beckmann
, Mark Jenkinson, Stephen M. Smith
, David C. Van Essen:
A multi-modal parcellation of human cerebral cortex. Nat. 536(7615): 171-178 (2016) - 2015
- [j88]Samuel J. Harrison
, Mark W. Woolrich
, Emma C. Robinson
, Matthew F. Glasser, Christian F. Beckmann
, Mark Jenkinson
, Stephen M. Smith
:
Large-scale Probabilistic Functional Modes from resting state fMRI. NeuroImage 109: 217-231 (2015) - 2014
- [j80]Maarten Mennes
, Mark Jenkinson
, Romain Valabrègue
, Jan K. Buitelaar, Christian F. Beckmann
, Stephen M. Smith
:
Optimizing full-brain coverage in human brain MRI through population distributions of brain size. NeuroImage 98: 513-520 (2014) - [j79]Emma C. Robinson
, Saâd Jbabdi, Matthew F. Glasser, Jesper L. R. Andersson, Gregory C. Burgess, Michael P. Harms
, Stephen M. Smith
, David C. Van Essen, Mark Jenkinson
:
MSM: A new flexible framework for Multimodal Surface Matching. NeuroImage 100: 414-426 (2014) - 2013
- [c19]Emma C. Robinson
, Saâd Jbabdi, Jesper L. R. Andersson, Stephen M. Smith
, Matthew F. Glasser, David C. Van Essen, Gregory C. Burgess, Michael P. Harms
, Deanna M. Barch, Mark Jenkinson
:
Multimodal Surface Matching: Fast and Generalisable Cortical Registration Using Discrete Optimisation. IPMI 2013: 475-486 - 2012
- [j64]Mark Jenkinson
, Christian F. Beckmann
, Timothy Edward John Behrens
, Mark William Woolrich
, Stephen M. Smith
:
FSL. NeuroImage 62(2): 782-790 (2012) - 2011
- [j54]Brian Patenaude, Stephen M. Smith
, David N. Kennedy, Mark Jenkinson
:
A Bayesian model of shape and appearance for subcortical brain segmentation. NeuroImage 56(3): 907-922 (2011) - [j53]Karla L. Miller
, Charlotte J. Stagg
, Gwenaëlle Douaud, Saâd Jbabdi, Stephen M. Smith
, Timothy Edward John Behrens
, Mark Jenkinson
, Steven A. Chance
, Margaret M. Esiri, Natalie L. Voets, Ned Jenkinson
, Tipu Z. Aziz, Martin R. Turner
, Heidi Johansen-Berg
, Jennifer A. McNab
:
Diffusion imaging of whole, post-mortem human brains on a clinical MRI scanner. NeuroImage 57(1): 167-181 (2011) - 2010
- [j51]Mojtaba Zarei, Brian Patenaude, Jessica Damoiseaux, Ciro Morgese
, Steve M. Smith
, Paul M. Matthews
, Frederik Barkhof
, Serge A. R. B. Rombouts
, Ernesto Sanz-Arigita
, Mark Jenkinson
:
Combining shape and connectivity analysis: An MRI study of thalamic degeneration in Alzheimer's disease. NeuroImage 49(1): 1-8 (2010) - [j48]Kolawole Oluwole Babalola
, Brian Patenaude, Paul Aljabar, Julia A. Schnabel
, David N. Kennedy, William R. Crum, Stephen M. Smith
, Timothy F. Cootes
, Mark Jenkinson
, Daniel Rueckert
:
Corrigendum to "An evaluation of four automatic methods of segmenting the subcortical structures in the brain" [NeuroImage 47 (2009) 1435-1447]. NeuroImage 49(1): 1152 (2010) - [j47]Mojtaba Zarei, Brian Patenaude, Jessica Damoiseaux, Ciro Morgese
, Steve M. Smith
, Paul M. Matthews
, Frederik Barkhof
, Serge A. R. B. Rombouts
, Ernesto Sanz-Arigita
, Mark Jenkinson
:
Corrigendum to "Combining shape and connectivity analysis: An MRI study of thalamic degeneration in Alzheimer's disease" [NeuroImage 49 (2010) 1-8]. NeuroImage 51(2): 940 (2010) - 2009
- [j42]Mark William Woolrich
, Saâd Jbabdi, Brian Patenaude, Michael A. Chappell
, Salima Makni, Timothy Behrens
, Christian F. Beckmann
, Mark Jenkinson
, Stephen M. Smith
:
Bayesian analysis of neuroimaging data in FSL. NeuroImage 45(1): S173-S186 (2009) - [j39]Kolawole Oluwole Babalola
, Brian Patenaude, Paul Aljabar, Julia A. Schnabel
, David N. Kennedy, William R. Crum, Stephen M. Smith
, Timothy F. Cootes
, Mark Jenkinson
, Daniel Rueckert
:
An evaluation of four automatic methods of segmenting the subcortical structures in the brain. NeuroImage 47(4): 1435-1447 (2009) - [c16]Aleksandar Petrovic, Stephen M. Smith
, Ricarda A. Menke, Mark Jenkinson
:
Methods for Tractography-Driven Surface Registration of Brain Structures. MICCAI (1) 2009: 705-712 - 2008
- [c14]Kolawole O. Babalola
, Brian Patenaude, Paul Aljabar, Julia A. Schnabel
, David N. Kennedy, William R. Crum, Stephen M. Smith
, Timothy F. Cootes
, Mark Jenkinson
, Daniel Rueckert
:
Comparison and Evaluation of Segmentation Techniques for Subcortical Structures in Brain MRI. MICCAI (1) 2008: 409-416 - 2007
- [j32]Stephen M. Smith
, Mark Jenkinson
, Christian F. Beckmann
, Karla L. Miller
, Mark W. Woolrich
:
Meaningful design and contrast estimability in FMRI. NeuroImage 34(1): 127-136 (2007) - [j29]Stephen M. Smith
, Anil Rao, Nicola De Stefano
, Mark Jenkinson
, Jonathan M. Schott
, Paul M. Matthews
, Nick C. Fox
:
Longitudinal and cross-sectional analysis of atrophy in Alzheimer's disease: Cross-validation of BSI, SIENA and SIENAX. NeuroImage 36(4): 1200-1206 (2007) - 2006
- [j24]T. E. J. Behrens
, Mark Jenkinson
, Matthew D. Robson
, Stephen M. Smith
, Heidi Johansen-Berg
:
A consistent relationship between local white matter architecture and functional specialisation in medial frontal cortex. NeuroImage 30(1): 220-227 (2006) - [j23]Stephen M. Smith
, Mark Jenkinson
, Heidi Johansen-Berg
, Daniel Rueckert
, Thomas E. Nichols
, Clare E. Mackay
, Kate E. Watkins
, Olga Ciccarelli, M. Zaheer Cader, Paul M. Matthews
, Timothy Edward John Behrens
:
Tract-based spatial statistics: Voxelwise analysis of multi-subject diffusion data. NeuroImage 31(4): 1487-1505 (2006) - [c12]Brian Patenaude, Stephen M. Smith
, Mark Jenkinson
:
A Bayesian Cost Function Applied to Model-Based Registration of Sub-cortical Brain Structures. WBIR 2006: 9-17 - 2004
- [j19]Mark W. Woolrich
, Timothy Edward John Behrens
, Christian F. Beckmann
, Mark Jenkinson
, Stephen M. Smith
:
Multilevel linear modelling for FMRI group analysis using Bayesian inference. NeuroImage 21(4): 1732-1747 (2004) - [j15]Mark William Woolrich
, Mark Jenkinson
, J. Michael Brady, Stephen M. Smith
:
Fully Bayesian spatio-temporal modeling of FMRI data. IEEE Trans. Medical Imaging 23(2): 213-231 (2004) - [c9]William R. Crum, Daniel Rueckert, Mark Jenkinson, David N. Kennedy, Stephen M. Smith:
A Framework for Detailed Objective Comparison of Non-rigid Registration Algorithms in Neuroimaging. MICCAI (1) 2004: 679-686 - 2003
- [j13]Christian F. Beckmann
, Mark Jenkinson
, Stephen M. Smith
:
General multilevel linear modeling for group analysis in FMRI. NeuroImage 20(2): 1052-1063 (2003) - 2002
- [j12]Stephen M. Smith
, Yongyue Zhang, Mark Jenkinson
, Jacqueline Chen, Paul M. Matthews
, Antonio Federico
, Nicola De Stefano
:
Accurate, Robust, and Automated Longitudinal and Cross-Sectional Brain Change Analysis. NeuroImage 17(1): 479-489 (2002) - [j11]Mark Jenkinson, Peter R. Bannister, Michael Brady, Stephen M. Smith:
Improved Optimization for the Robust and Accurate Linear Registration and Motion Correction of Brain Images. NeuroImage 17(2): 825-841 (2002) - 2001
- [j9]Mark Jenkinson
, Stephen M. Smith
:
A global optimisation method for robust affine registration of brain images. Medical Image Anal. 5(2): 143-156 (2001) - 1999
- [c5]Stephen M. Smith
, Mark Jenkinson:
Accurate Robust Symmetry Estimation. MICCAI 1999: 308-317

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