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ORCIDXinyi Liu 0003
Person information
- affiliation: Shanghai Jiao-Tong University, School of Medicine, Renji Hospital, Department of Pharmacy, Shanghai, China
Other persons with the same name
- Xinyi Liu — disambiguation page
- Xinyi Liu 0001
![[0009-0007-8346-4095]](https://dblp.uni-trier.de/img/orcid-mark.12x12.png "0009-0007-8346-4095")
— Northeastern University, Boston, MA, USA (and 2 more) - Xinyi Liu 0002 — Wuhan University, School of Remote Sensing and Information Engineering, Wuhan, China
- Xinyi Liu 0004 — Jinan University, School of Management, Guangzhou, China
- Xinyi Liu 0005 — State Grid Info & Telecom Group Co., Ltd., Beijing, China
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Journal Articles
- 2024
[j17]Qian Li, Zhijie Hu, Jiayin He, Xinyi Liu, Yini Liu, Jiale Wei, Binjian Wu, Xun Lu, Hongxi He, Yuqi Zhang, Jixiao He, Mingyu Li, Chengwei Wu, Lijun Lv, Yang Wang, Linxuan Zhou, Quan Zhang, Jian Zhang, Xiaoyue Cheng, Hongfang Shao, Xuefeng Lu:
Deciphering the comprehensive knowledgebase landscape featuring infertility with IDDB Xtra. Comput. Biol. Medicine 170: 108105 (2024)- 2023
- [j16]Jinyin Zha, Qian Li, Xinyi Liu, Weidong Lin, Tingting Wang, Jiacheng Wei, Ziliang Zhang, Xun Lu, Jing Wu, Duan Ni, Kun Song, Liang Zhang, Xuefeng Lu, Shaoyong Lu, Jian Zhang:
AlloReverse: multiscale understanding among hierarchical allosteric regulations. Nucleic Acids Res. 51(W1): 33-38 (2023) - [j15]Qianqian Song, Mingyu Li, Qian Li, Xun Lu, Kun Song, Ziliang Zhang, Jiale Wei, Liang Zhang, Jiacheng Wei, Youqiong Ye, Jinyin Zha, Qiufen Zhang, Qiang Gao, Jiang Long, Xinyi Liu, Xuefeng Lu, Jian Zhang:
DeepAlloDriver: a deep learning-based strategy to predict cancer driver mutations. Nucleic Acids Res. 51(W1): 129-133 (2023) - 2021
- [j14]Jing Wu, Danjun Li, Xinyi Liu, Qian Li, Xinheng He, Jiale Wei, Xinyi Li, Mingyu Li, Ashfaq Ur Rehman, Yujia Xia, Chengwei Wu, Jian Zhang, Xuefeng Lu:
IDDB: a comprehensive resource featuring genes, variants and characteristics associated with infertility. Nucleic Acids Res. 49(Database-Issue): D1218-D1232 (2021) - 2020
- [j13]Xinyi Liu, Shaoyong Lu, Kun Song, Qiancheng Shen, Duan Ni, Qian Li, Xinheng He, Hao Zhang, Qi Wang, Yingyi Chen, Xinyi Li, Jing Wu, Chunquan Sheng, Guoqiang Chen, Yaqin Liu, Xuefeng Lu, Jian Zhang:
Unraveling allosteric landscapes of allosterome with ASD. Nucleic Acids Res. 48(Database-Issue): D394-D401 (2020) - 2019
- [j12]Kun Song, Qian Li, Wei Gao, Shaoyong Lu, Qiancheng Shen, Xinyi Liu, Yongyan Wu, Binquan Wang, Houwen Lin, Guoqiang Chen, Jian Zhang:
AlloDriver: a method for the identification and analysis of cancer driver targets. Nucleic Acids Res. 47(Webserver-Issue): W315-W321 (2019) - 2018
- [j11]Min Huang, Kun Song, Xinyi Liu, Shaoyong Lu, Qiancheng Shen, Renxiao Wang, Jingze Gao, Yuanyuan Hong, Qian Li, Duan Ni, Jianrong Xu, Guoqiang Chen, Jian Zhang:
AlloFinder: a strategy for allosteric modulator discovery and allosterome analyses. Nucleic Acids Res. 46(Webserver-Issue): W451-W458 (2018) - 2017
- [j10]Kun Song, Xinyi Liu, Wenkang Huang, Shaoyong Lu, Qiancheng Shen, Lu Zhang, Jian Zhang:
Improved Method for the Identification and Validation of Allosteric Sites. J. Chem. Inf. Model. 57(9): 2358-2363 (2017) - 2016
- [j9]Luis N. Marenco, Rixin Wang, Robert A. McDougal, Tsviya Olender, Michal Twik, Elspeth A. Bruford, Xinyi Liu, Jian Zhang, Doron Lancet, Gordon M. Shepherd, Chiquito J. Crasto:
ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions. Database J. Biol. Databases Curation 2016 (2016) - [j8]Shuai Li, Qiancheng Shen, Minyi Su, Xinyi Liu, Shaoyong Lu, Zhongjie Chen, Renxiao Wang, Jian Zhang:
Alloscore: a method for predicting allosteric ligand-protein interactions. Bioinform. 32(10): 1574-1576 (2016) - [j7]Qiancheng Shen, Guanqiao Wang, Shuai Li, Xinyi Liu, Shaoyong Lu, Zhongjie Chen, Kun Song, Junhao Yan, Lv Geng, Zhimin Huang, Wenkang Huang, Guoqiang Chen, Jian Zhang:
ASD v3.0: unraveling allosteric regulation with structural mechanisms and biological networks. Nucleic Acids Res. 44(Database-Issue): 527-535 (2016) - 2015
- [j6]Wenkang Huang, Guanqiao Wang, Qiancheng Shen, Xinyi Liu, Shaoyong Lu, Lv Geng, Zhimin Huang, Jian Zhang:
ASBench: benchmarking sets for allosteric discovery. Bioinform. 31(15): 2598-2600 (2015) - 2014
- [j5]Zhimin Huang, Linkai Mou, Qiancheng Shen, Shaoyong Lu, Chuangang Li, Xinyi Liu, Guanqiao Wang, Shuai Li, Lv Geng, Yaqin Liu, Jiawei Wu, Guoqiang Chen, Jian Zhang:
ASD v2.0: updated content and novel features focusing on allosteric regulation. Nucleic Acids Res. 42(Database-Issue): 510-516 (2014) - 2013
- [j4]Wenkang Huang, Shaoyong Lu, Zhimin Huang, Xinyi Liu, Linkai Mou, Yu Luo, Yanlong Zhao, Yaqin Liu, Zhongjie Chen, Tingjun Hou, Jian Zhang:
Allosite: a method for predicting allosteric sites. Bioinform. 29(18): 2357-2359 (2013) - 2012
- [j3]Shaoyong Lu, Wenkang Huang, Xiaobai Li, Zhimin Huang, Xinyi Liu, Yingyi Chen, Ting Shi, Jian Zhang:
Insights into the Role of Magnesium Triad in myo-Inositol Monophosphatase: Metal Mechanism, Substrate Binding, and Lithium Therapy. J. Chem. Inf. Model. 52(9): 2398-2409 (2012) - 2011
- [j2]Xinyi Liu, Xubo Su, Fei Wang, Zhimin Huang, Qi Wang, Zhen Li, Ruina Zhang, Lifang Wu, Yi Pan, Yingyi Chen, Hanyi Zhuang, Guoqiang Chen, Ting Shi, Jian Zhang:
ODORactor: a web server for deciphering olfactory coding. Bioinform. 27(16): 2302-2303 (2011) - [j1]Zhimin Huang, Liang Zhu, Yan Cao, Geng Wu, Xinyi Liu, Yingyi Chen, Qi Wang, Ting Shi, Yaxue Zhao, Yuefei Wang, Weihua Li, Yixue Li, Haifeng Chen, Guoqiang Chen, Jian Zhang:
ASD: a comprehensive database of allosteric proteins and modulators. Nucleic Acids Res. 39(Database-Issue): 663-669 (2011)
Informal and Other Publications
- 2025
- [i2]Binjian Wu, Qian Li, Zhe Kuang, Hongyuan Gao, Xinyi Liu, Haiyan Guo, Qiuju Chen, Xinyi Liu, Yangruizhe Jiang, Yuqi Zhang, Jinyin Zha, Mingyu Li, Qiuhan Ren, Sishuo Feng, Haicang Zhang, Xuefeng Lu, Jian Zhang:
ILETIA: An AI-enhanced method for individualized trigger-oocyte pickup interval estimation of progestin-primed ovarian stimulation protocol. CoRR abs/2501.16386 (2025) - [i1]Binjian Wu, Qian Li, Zhe Kuang, Hongyuan Gao, Xinyi Liu, Haiyan Guo, Qiuju Chen, Xinyi Liu, Yangruizhe Jiang, Yuqi Zhang, Jinyin Zha, Mingyu Li, Qiuhan Ren, Sishuo Feng, Haicang Zhang, Xuefeng Lu, Jian Zhang:
ILETIA: An AI-enhanced method for individualized trigger-oocyte pickup interval estimation of progestin-primed ovarian stimulation protocol. CoRR abs/2501.16386 (2025)
Coauthor Index
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