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ORCIDChi Zhang 0021
Person information
- affiliation: Indiana University School of Medicine, Indianapolis, IN, USA
- affiliation (PhD 2015): University of Georgia, Institute of Bioinformatics, Athens, GA, USA
Other persons with the same name
- Chi Zhang — disambiguation page
- Chi Zhang 0001
![[0000-0002-6528-1427]](https://dblp.uni-trier.de/img/orcid-mark.12x12.png "0000-0002-6528-1427")
— University of Science and Technology of China, School of Information Science and Technology, Hefei, China (and 1 more) - Chi Zhang 0002 — Dalian University of Technology, Dalian, China (and 1 more)
- Chi Zhang 0003 — Hokkaido University, Laboratory of Vehicle Robotics, Graduate School of Agriculture, Sapporo, Japan
- Chi Zhang 0004 — China University of Geosciences, Beijing, China
- Chi Zhang 0005 — Beijing University of Technology, School of Economics and Management, China (and 2 more)
- Chi Zhang 0006 — Prismo Systems, Santa Clara, CA, USA (and 2 more)
- Chi Zhang 0007 — Nanyang Technological University, Interdisciplinary Graduate School, Singapore
- Chi Zhang 0008 — China National Digital Switching System Engineering and Technological Research Center, Zhengzhou, China
- Chi Zhang 0009 — Experian DataLabs, San Diego, CA, USA (and 1 more)
- Chi Zhang 0010 — Peking University, College of Chemistry and Molecular Engineering, Beijing, China
- Chi Zhang 0011 — Chinese Academy of Sciences, Xinjiang Institute of Ecology and Geography, Urumqi, China (and 1 more)
- Chi Zhang 0012 — JD.com Silicon Valley Research Center, Mountain View, CA, USA
- Chi Zhang 0013 — University of Nebraska-Lincoln, School of Biological Sciences, Lincoln, NE, USA
- Chi Zhang 0014 — Chinese Academy of Sciences, Ningbo Institute of Materials Technology and Engineering, Zhejiang Key Laboratory of Robotics and Intelligent Manufacturing Equipment Technology and Engineering, China (and 1 more)
- Chi Zhang 0015 — Jiangxi University of Finance and Economics, Software School, Nanchang, China
- Chi Zhang 0016 — University of California, Los Angeles, CA, USA
- Chi Zhang 0017 — University of California, Los Angeles, CA, USA (and 1 more)
- Chi Zhang 0018 — University of California at San Diego, San Diego, USA (and 1 more)
- Chi Zhang 0019 — Beijing University of Posts and Telecommunications, School of Computer Science, China
- Chi Zhang 0020 — Xi'an Jiaotong University, Institute of Artificial Intelligence and Robotics, China
- Chi Zhang 0022 — University of Southern California, Computer Science Department, Los Angeles, CA, USA
- Chi Zhang 0023 — Rochester Institute of Technology, NY, USA
- Chi Zhang 0024 — Technical University of Munich, Chair of Aerodynamics and Fluid Mechanics, Germany
- Chi Zhang 0025 — Beijing University of Posts and Telecommunications, Wireless Theories and Technologies Lab, China
- Chi Zhang 0026 — Megvii Technology, Beijing Research Institute, China
- Chi Zhang 0027 — Jiangxi University of Finance and Economics, School of Information Technology, Nanchang, China
- Chi Zhang 0028 — Kennesaw State University, Marietta, GA, USA
- Chi Zhang 0029 — University of Electronic Science and Technology of China, State Key Laboratory of Electronic Thin Films and Integrated Devices, Chengdu, China
- Chi Zhang 0030 — Hitachi America Ltd., Industrial AI Lab, Santa Clara, CA, USA
- Chi Zhang 0031 — University of Tennessee, Department of Electrical Engineering and Computer Science, Knoxville, TN, USA (and 1 more)
- Chi Zhang 0032 — Chinese Academy of Sciences, Institute of Automation, Research Center of Precision Sensing and Control, Beijing, China (and 1 more)
- Chi Zhang 0033 — Chinese Academy of Sciences, Institute of Vertebrate Paleontology and Paleoanthropology, Beijing, China
- Chi Zhang 0034 — University of Edinburgh, UK (and 1 more)
- Chi Zhang 0035 — Beijing Institute of Technology, School of Automation, State Key Laboratory of Intelligent Control and Decision of Complex Systems, China
- Chi Zhang 0036 — Shenzhen University, College of Economics, China
- Chi Zhang 0037 — Nantong University, College of Geographic Science, China (and 1 more)
- Chi Zhang 0038 — Ohio State University, Department of Civil Environmental and Geodetic Engineering, Columbus, OH, USA
- Chi Zhang 0039 — Chongqing University, State Key Laboratory of Power Transmission Equipment & System Security and New Technology, China
- Chi Zhang 0040 — University of Gothenburg, Sweden (and 1 more)
- Chi Zhang 0041 — Google, Mountain View, CA, USA (and 1 more)
- Chi Zhang 0042 — University of Bath, Department of Electronic and Electrical Engineering, UK
- Chi Zhang 0043 — University of Science and Technology of China, LINKE Lab / CAS Key Laboratory of Wireless-Optical Communications, Hefei, China
- Chi Zhang 0044 — University of Science and Technology of China, National Engineering Laboratory for Brain-inspired Intelligence Technology and Application, Hefei, China
- Chi Zhang 0045 — National University of Defense and Technology, College of Electronic Science, Changsha, China
- Chi Zhang 0046 — Jiangsu University, School of Computer Science and Communication Engineering, Zhenjiang, China
- Chi Zhang 0047 — Harbin Engineering University, College of Information and Communication Engineering, China
- Chi Zhang 0048 — Zhengzhou University, School of Management Engineering, China
- Chi Zhang 0049 — Peking University, Academy for Advanced Interdisciplinary Studies, Beijing, China
- Chi Zhang 0050 — Southeast University, School of Electrical Engineering, Nanjing, China
- Chi Zhang 0051 — University of Oslo, Department of Biostatistics, Domus Medica, Norway
- Chi Zhang 0052 — Nanjing University of Posts and Telecommunications, School of Economics, China
- Chi Zhang 0053 — Shanghai Customs College, Graduate School, China
- Chi Zhang 0054 — Dalian University of Technology, School of Software Technology, China
- Chi Zhang 0055 — COMAC Beijing Aircraft Technology Research Institute, China
- Chi Zhang 0056 — Xidian University, National Key Laboratory of Antennas and Microwave Technology, Xi'an, China
- Chi Zhang 0057 — University of Minnesota, Center for Magnetic Resonance Research, Minneapolis, MN, USA
- Chi Zhang 0058 — Bournemouth University, UK
- Chi Zhang 0059 — Columbia University, USA
- Chi Zhang 0060 — Harbin Engineering University, Harbin, China
- Chi Zhang 0061 — Shanghai Jiao Tong University, School of Electronic Information and Electrical Engineering, China
- Chi Zhang 0062 — Guangxi University, School of Mechanical Engineering, Center on Nanoenergy Research, School of Physical Science and Technology, China (and 1 more)
- Chi Zhang 0063 — Beijing Institute of Technology, Beijing Laboratory of Intelligent Information Technology, School of Computer Science, China (and 2 more)
- Chi Zhang 0064 — Nanyang Technological University, School of Computer Engineering, Singapore
- Chi Zhang 0065 — Boston University, USA
- Chi Zhang 0066 — University of Science and Technology Beijing, School of Automation and Electrical Engineering, China
- Chi Zhang 0067 — Tencent PCG, China
- Chi Zhang 0068 — Keebo, Inc., Ann Arbor, MI, USA (and 1 more)
- Chi Zhang 0069 — Xiaomi Technology, Beijing, China (and 1 more)
- Chi Zhang 0070 — Princeton University, Department of Computer Science, NJ, USA
- Chi Zhang 0071 — Purdue University, Lafayette, IN, USA (and 2 more)
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Journal Articles
- 2023
[j17]Yi Zhou, Wennan Chang, Xiaoyu Lu, Jin Wang, Chi Zhang, Ying Xu:
Acid-Base Homeostasis and Implications to the Phenotypic Behaviors of Cancer. Genom. Proteom. Bioinform. 21(6): 1133-1148 (2023)- [j16]Hyundoo Jeong, Jose Lugo-Martinez, Anna M. Ritz, Yijie Wang, Chi Zhang:
Special Issue Computational Network Biology: Modeling, Analysis, and Control (CNB-MAC) Workshop (2022). J. Comput. Biol. 30(7): 737 (2023) - [j15]Zixuan Zhang, Haiqi Zhu, Pengtao Dang, Jia Wang, Wennan Chang, Xiao Wang, Norah Alghamdi, Alex Lu, Yong Zang, Wenzhuo Wu, Yijie Wang, Yu Zhang, Sha Cao, Chi Zhang:
FLUXestimator: a webserver for predicting metabolic flux and variations using transcriptomics data. Nucleic Acids Res. 51(W1): 180-190 (2023) - 2022
- [j14]Wennan Chang, Chi Zhang, Sha Cao:
Response to 'Letter to the Editor: on the stability and internal consistency of component-wise sparse mixture regression based clustering', Zhang et al.. Briefings Bioinform. 23(4) (2022) - [j13]Junyi Zhou, Xiaoyu Lu, Wennan Chang, Changlin Wan, Xiongbin Lu, Chi Zhang, Sha Cao:
PLUS: Predicting cancer metastasis potential based on positive and unlabeled learning. PLoS Comput. Biol. 18(3) (2022) - 2021
- [j12]Yuzhou Chang, Carter Allen, Changlin Wan, Dongjun Chung, Chi Zhang, Zihai Li, Qin Ma:
IRIS-FGM: an integrative single-cell RNA-Seq interpretation system for functional gene module analysis. Bioinform. 37(18): 3045-3047 (2021) - 2020
- [j11]Juan Xie, Anjun Ma, Yu Zhang, Bingqiang Liu, Sha Cao, Cankun Wang, Jennifer Xu, Chi Zhang, Qin Ma:
QUBIC2: a novel and robust biclustering algorithm for analyses and interpretation of large-scale RNA-Seq data. Bioinform. 36(4): 1143-1149 (2020) - [j10]Anjun Ma, Cankun Wang, Yuzhou Chang, Faith H. Brennan, Adam McDermaid, Bingqiang Liu, Chi Zhang, Phillip G. Popovich, Qin Ma:
IRIS3: integrated cell-type-specific regulon inference server from single-cell RNA-Seq. Nucleic Acids Res. 48(Webserver-Issue): W275-W286 (2020) - [j9]Jin Zhao, Haodi Feng, Daming Zhu, Chi Zhang, Ying Xu:
IsoTree: A New Framework for de novo Transcriptome Assembly from RNA-seq Reads. IEEE ACM Trans. Comput. Biol. Bioinform. 17(3): 938-948 (2020) - [j8]Jin Zhao, Haodi Feng, Daming Zhu, Chi Zhang, Ying Xu:
Corrections to "IsoTree: A New Framework for de novo Transcriptome Assembly from RNA-seq Reads". IEEE ACM Trans. Comput. Biol. Bioinform. 17(6): 2197 (2020) - 2019
- [j7]Yu Zhang, Changlin Wan, Pengcheng Wang, Wennan Chang, Yan Huo, Jian Chen, Qin Ma, Sha Cao, Chi Zhang:
M3S: a comprehensive model selection for multi-modal single-cell RNA sequencing data. BMC Bioinform. 20-S(24): 672 (2019) - [j6]Jin Zhao, Haodi Feng, Daming Zhu, Chi Zhang, Ying Xu:
DTA-SiST: de novo transcriptome assembly by using simplified suffix trees. BMC Bioinform. 20-S(25): 698 (2019) - [j5]Yong Zang, Wing Kam Fung, Sha Cao, Hon Keung Tony Ng, Chi Zhang:
Robust tests for gene-environment interaction in case-control and case-only designs. Comput. Stat. Data Anal. 129: 79-92 (2019) - 2018
- [j4]Yu Zhang, Sha Cao, Jing Zhao, Burair Alsaihati, Qin Ma, Chi Zhang:
MRHCA: a nonparametric statistics based method for hub and co-expression module identification in large gene co-expression network. Quant. Biol. 6(1): 40-55 (2018) - 2017
- [j3]Yu Zhang, Juan Xie, Jinyu Yang, Anne Fennell, Chi Zhang, Qin Ma:
QUBIC: a bioconductor package for qualitative biclustering analysis of gene co-expression data. Bioinform. 33(3): 450-452 (2017) - 2015
- [j2]Chao Liu, Chi Zhang, Jing Su, Dongsheng Zhang, Sha Cao:
Stresses drive a cancer's initiation, progression and metastasis: Critical comments on the book "Cancer Bioinformatics". J. Bioinform. Comput. Biol. 13(2): 1571002:1-1571002:11 (2015) - 2014
- [j1]Chi Zhang, Sha Cao, Ying Xu:
Population dynamics inside cancer biomass driven by repeated hypoxia-reoxygenation cycles. Quant. Biol. 2(3): 85-99 (2014)
Conference and Workshop Papers
- 2023
- [c11]Pengtao Dang, Haiqi Zhu, Tingbo Guo, Changlin Wan, Tong Zhao, Paul Salama, Yijie Wang, Sha Cao, Chi Zhang:
Generalized Matrix Local Low Rank Representation by Random Projection and Submatrix Propagation. KDD 2023: 390-401 - 2022
- [c10]Yuetian Luo, Qin Ma, Chi Zhang, Anru R. Zhang:
Provable Second-Order Riemannian Gauss-Newton Method for Low-Rank Tensor Estimation ‖. ICASSP 2022: 9057-9061 - [c9]Changlin Wan, Pengtao Dang, Tong Zhao, Yong Zang, Chi Zhang, Sha Cao:
Bias aware probabilistic Boolean matrix factorization. UAI 2022: 2035-2044 - 2021
- [c8]Wennan Chang, Pengdao Dang, Changlin Wan, Xiaoyu Lu, Yue Fang, Tong Zhao, Yong Zang, Bo Li, Chi Zhang, Sha Cao:
Spatially and Robustly Hybrid Mixture Regression Model for Inference of Spatial Dependence. ICDM 2021: 31-40 - 2020
- [c7]Changlin Wan, Wennan Chang, Tong Zhao, Mengya Li, Sha Cao, Chi Zhang:
Fast and Efficient Boolean Matrix Factorization by Geometric Segmentation. AAAI 2020: 6086-6093 - [c6]Changlin Wan, Dongya Jia, Yue Zhao, Wennan Chang, Sha Cao, Xiao Wang, Chi Zhang:
A data denoising approach to optimize functional clustering of single cell RNA-sequencing data. BIBM 2020: 217-222 - [c5]Changlin Wan, Wennan Chang, Tong Zhao, Sha Cao, Chi Zhang:
Denoising Individual Bias for Fairer Binary Submatrix Detection. CIKM 2020: 2245-2248 - [c4]Changlin Wan, Wennan Chang, Tong Zhao, Sha Cao, Chi Zhang:
Geometric All-way Boolean Tensor Decomposition. NeurIPS 2020 - 2018
- [c3]Jin Zhao, Haodi Feng, Daming Zhu, Chi Zhang, Ying Xu:
DTAST: A Novel Radical Framework for de Novo Transcriptome Assembly Based on Suffix Trees. ICIC (1) 2018: 740-745 - 2017
- [c2]Jin Zhao, Haodi Feng, Daming Zhu, Chi Zhang, Ying Xu:
IsoTree: De Novo Transcriptome Assembly from RNA-Seq Reads - (Extended Abstract). ISBRA 2017: 71-83 - 2016
- [c1]Yan Wang, Wei Du, Yanchun Liang, Xin Chen, Chi Zhang, Wei Pang, Ying Xu:
PUEPro: A Computational Pipeline for Prediction of Urine Excretory Proteins. ADMA 2016: 714-725
Informal and Other Publications
- 2021
- [i7]Changlin Wan, Muhan Zhang, Wei Hao, Sha Cao, Pan Li, Chi Zhang:
Principled Hyperedge Prediction with Structural Spectral Features and Neural Networks. CoRR abs/2106.04292 (2021) - [i6]Wennan Chang, Pengdao Dang, Changlin Wan, Xiaoyu Lu, Yue Fang, Tong Zhao, Yong Zang, Bo Li, Chi Zhang, Sha Cao:
Spatially and Robustly Hybrid Mixture Regression Model for Inference of Spatial Dependence. CoRR abs/2109.00539 (2021) - 2020
- [i5]Wennan Chang, Xinyu Zhou, Yong Zang, Chi Zhang, Sha Cao:
A New Algorithm using Component-wise Adaptive Trimming For Robust Mixture Regression. CoRR abs/2005.11599 (2020) - [i4]Wennan Chang, Changlin Wan, Yong Zang, Chi Zhang, Sha Cao:
Supervised clustering of high dimensional data using regularized mixture modeling. CoRR abs/2007.09720 (2020) - [i3]Changlin Wan, Wennan Chang, Tong Zhao, Yong Zang, Sha Cao, Chi Zhang:
Denoising individual bias for a fairer binary submatrix detection. CoRR abs/2007.15816 (2020) - [i2]Changlin Wan, Wennan Chang, Tong Zhao, Sha Cao, Chi Zhang:
Geometric All-Way Boolean Tensor Decomposition. CoRR abs/2007.15821 (2020) - 2019
- [i1]Changlin Wan, Wennan Chang, Tong Zhao, Mengya Li, Sha Cao, Chi Zhang:
MEBF: a fast and efficient Boolean matrix factorization method. CoRR abs/1909.03991 (2019)
Coauthor Index
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