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David Simoncini
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Journal Articles
- 2020
- [j3]Jelena Vucinic
, David Simoncini, Manon Ruffini, Sophie Barbe
, Thomas Schiex:
Positive multistate protein design. Bioinform. 36(1): 122-130 (2020) - 2019
- [j2]David Simoncini, Kam Y. J. Zhang, Thomas Schiex, Sophie Barbe
:
A structural homology approach for computational protein design with flexible backbone. Bioinform. 35(14): 2418-2426 (2019) - 2012
- [j1]Francois Berenger
, Rojan Shrestha, Yong Zhou, David Simoncini, Kam Y. J. Zhang:
Durandal: Fast exact clustering of protein decoys. J. Comput. Chem. 33(4): 471-474 (2012)
Conference and Workshop Papers
- 2018
- [c7]David Simoncini, Sophie Barbe
, Thomas Schiex, Sébastien Vérel:
Fitness landscape analysis around the optimum in computational protein design. GECCO 2018: 355-362 - 2016
- [c6]Clément Viricel, David Simoncini, Sophie Barbe
, Thomas Schiex:
Guaranteed Weighted Counting for Affinity Computation: Beyond Determinism and Structure. CP 2016: 733-750 - 2015
- [c5]Clément Viricel, David Simoncini, David Allouche, Simon de Givry, Sophie Barbe
, Thomas Schiex:
Approximate Counting with Deterministic Guarantees for Affinity Computation. MCO (2) 2015: 165-176 - 2009
- [c4]David Simoncini, Sébastien Vérel
, Philippe Collard, Manuel Clergue
:
Centric selection: a way to tune the exploration/exploitation trade-off. GECCO 2009: 891-898 - 2007
- [c3]David Simoncini, Philippe Collard, Sébastien Vérel
, Manuel Clergue
:
On the influence of selection operators on performances in cellular Genetic Algorithms. IEEE Congress on Evolutionary Computation 2007: 4706-4713 - 2006
- [c2]David Simoncini, Philippe Collard, Sébastien Vérel, Manuel Clergue:
From Cells to Islands: An Unified Model of Cellular Parallel Genetic Algorithms. ACRI 2006: 248-257 - [c1]David Simoncini, Sébastien Vérel, Philippe Collard, Manuel Clergue:
Anisotropic selection in cellular genetic algorithms. GECCO 2006: 559-566
Reference Works
- 2019
- [r1]David Simoncini, Kam Y. J. Zhang:
Population-Based Sampling and Fragment-Based De Novo Protein Structure Prediction. Encyclopedia of Bioinformatics and Computational Biology (1) 2019: 774-784
Informal and Other Publications
- 2017
- [i5]Francois Berenger
, David Simoncini, Arnout R. D. Voet
, Rojan Shrestha, Kam Y. J. Zhang:
Fragger: a protein fragment picker for structural queries. F1000Research 6: 1722- (2017) - 2011
- [i4]David Simoncini, Sébastien Vérel, Philippe Collard, Manuel Clergue:
Centric selection: a way to tune the exploration/exploitation trade-off. CoRR abs/1107.4163 (2011) - 2008
- [i3]David Simoncini, Sébastien Vérel, Philippe Collard, Manuel Clergue:
Anisotropic selection in cellular genetic algorithms. CoRR abs/0802.2429 (2008) - [i2]David Simoncini, Philippe Collard, Sébastien Vérel, Manuel Clergue:
From Cells to Islands: An unified Model of Cellular Parallel Genetic Algorithms. CoRR abs/0803.4248 (2008) - [i1]David Simoncini, Philippe Collard, Sébastien Vérel, Manuel Clergue:
On the Influence of Selection Operators on Performances in Cellular Genetic Algorithms. CoRR abs/0804.0852 (2008)
Coauthor Index
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