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2020 – today
- 2023
[j18]Molly A. Bogue
, Robyn L. Ball, Vivek M. Philip, David O. Walton, Matthew H. Dunn, Georgi Kolishovski, Anna Lamoureux, Matthew Gerring, Hongping Liang, Jake Emerson, Tim Stearns, Hao He, Gaurab Mukherjee, John Bluis, Sejal Desai, Beth A. Sundberg, Beena Kadakkuzha, Kunde Ramamoorthy Govindarajan, Elissa J. Chesler:
Mouse Phenome Database: towards a more FAIR-compliant and TRUST-worthy data repository and tool suite for phenotypes and genotypes. Nucleic Acids Res. 51(D1): 1067-1074 (2023)- 2020
- [j17]Molly A. Bogue, Vivek M. Philip, David O. Walton, Stephen C. Grubb, Matthew H. Dunn, Georgi Kolishovski, Jake Emerson, Gaurab Mukherjee, Tim Stearns, Hao He, Vinita Sinha, Beena Kadakkuzha, Kunde Ramamoorthy Govindarajan, Elissa J. Chesler:
Mouse Phenome Database: a data repository and analysis suite for curated primary mouse phenotype data. Nucleic Acids Res. 48(Database-Issue): D716-D723 (2020)
2010 – 2019
- 2019
- [j16]Charles A. Phillips, Kai Wang, Erich J. Baker, Jason A. Bubier, Elissa J. Chesler, Michael A. Langston:
On Finding and Enumerating Maximal and Maximum k-Partite Cliques in k-Partite Graphs. Algorithms 12(1): 23 (2019) - [j15]Jason A. Bubier, David P. Hill, Gaurab Mukherjee, Timothy Reynolds, Erich J. Baker, Alexander Berger, Jake Emerson, Judith A. Blake, Elissa J. Chesler:
Curating gene sets: challenges and opportunities for integrative analysis. Database J. Biol. Databases Curation 2019: baz036 (2019) - 2018
- [j14]Molly A. Bogue, Stephen C. Grubb, David O. Walton, Vivek M. Philip, Georgi Kolishovski, Tim Stearns, Matthew H. Dunn, Daniel A. Skelly, Beena Kadakkuzha, Gregg TeHennepe, Kunde Ramamoorthy Govindarajan, Elissa J. Chesler:
Mouse Phenome Database: an integrative database and analysis suite for curated empirical phenotype data from laboratory mice. Nucleic Acids Res. 46(Database-Issue): D843-D850 (2018) - 2016
- [j13]Erich J. Baker, Jason A. Bubier, Timothy Reynolds, Michael A. Langston, Elissa J. Chesler:
GeneWeaver: data driven alignment of cross-species genomics in biology and disease. Nucleic Acids Res. 44(Database-Issue): 555-559 (2016) - 2015
- [j12]Mansi Sethi, Shreyas S. Joshi, Martin Striz, Neil Cole, Jennifer Ryan, Michael E. Lhamon, Anuj Agarwal, Stacey J. Sukoff Rizzo, James M. Denegre, Robert E. Braun, David W. Fardo, Kevin D. Donohue, Elissa J. Chesler, Karen L. Svenson, Bruce F. O'Hara:
Analysis of sleep traits in knockout mice from the large-scale KOMP2 population using a non-invasive, high-throughput piezoelectric system. BMC Bioinform. 16(S15): P15 (2015) - [c6]Charles A. Phillips, Kai Wang, Jason A. Bubier, Erich J. Baker, Elissa J. Chesler, Michael A. Langston:
Scalable multipartite subgraph enumeration for integrative analysis of heterogeneous experimental functional genomics data. BCB 2015: 626-633 - 2014
- [j11]Yun Zhang, Charles A. Phillips, Gary L. Rogers, Erich J. Baker, Elissa J. Chesler, Michael A. Langston:
On finding bicliques in bipartite graphs: a novel algorithm and its application to the integration of diverse biological data types. BMC Bioinform. 15: 110 (2014) - [j10]Charles A. Phillips, Erich J. Baker, Elissa J. Chesler, Michael A. Langston:
Algorithmic tools for tripartite data analysis. BMC Bioinform. 15(S-10): P32 (2014) - 2013
- [c5]Jeremy J. Jay, Erich J. Baker, Elissa J. Chesler:
A Context-Driven Gene Prioritization Method for Web-Based Functional Genomics. ISBRA 2013: 161-172 - 2012
- [j9]Jeremy J. Jay, John D. Eblen, Yun Zhang, Mikael Benson, Andy D. Perkins, Arnold M. Saxton, Brynn H. Voy, Elissa J. Chesler, Michael A. Langston:
A systematic comparison of genome-scale clustering algorithms. BMC Bioinform. 13(S-10): S7 (2012) - [j8]Erich J. Baker, Jeremy J. Jay, Jason A. Bubier, Michael A. Langston, Elissa J. Chesler:
GeneWeaver: a web-based system for integrative functional genomics. Nucleic Acids Res. 40(Database-Issue): 1067-1076 (2012) - [c4]Charles A. Phillips, Jeremy J. Jay, Erich J. Baker, Elissa J. Chesler, Michael A. Langston:
On Bipartite Graph Decomposition in the Presence of Noise, with Applications to Biological Data Clustering. CTW 2012: 215-219 - 2011
- [j7]Terrence F. Meehan, Christopher J. Carr, Jeremy J. Jay, Carol J. Bult, Elissa J. Chesler, Judith A. Blake:
Autism candidate genes via mouse phenomics. J. Biomed. Informatics 44(Supplement-1): S5-S11 (2011) - [c3]Jeremy J. Jay, John D. Eblen, Yun Zhang, Mikael Benson, Andy D. Perkins, Arnold M. Saxton, Brynn H. Voy, Elissa J. Chesler, Michael A. Langston:
A Systematic Comparison of Genome Scale Clustering Algorithms - (Extended Abstract). ISBRA 2011: 416-427 - 2010
- [j6]Sudhir Naswa, Gary L. Rogers Jr., Rachel M. Lynch, Stephen A. Kania, Suchita Das, Elissa J. Chesler, Arnold M. Saxton, Brynn H. Voy, Michael A. Langston:
Inferring gene coexpression networks for low dose ionizing radiation using graph theoretical algorithms and systems genetics. BMC Bioinform. 11(S-4): O5 (2010)
2000 – 2009
- 2009
- [j5]Mingzhou (Joe) Song, Chris K. Lewis, Eric R. Lance, Elissa J. Chesler, Roumyana Kirova Yordanova, Michael A. Langston, Kerrie H. Lodowski, Susan E. Bergeson:
Reconstructing Generalized Logical Networks of Transcriptional Regulation in Mouse Brain from Temporal Gene Expression Data. EURASIP J. Bioinform. Syst. Biol. 2009 (2009) - 2008
- [j4]Joshua R. New, Wesley Kendall, Jian Huang, Elissa J. Chesler:
Dynamic Visualization of Coexpression in Systems Genetics Data. IEEE Trans. Vis. Comput. Graph. 14(5): 1081-1095 (2008) - 2006
- [j3]Brynn H. Voy, Jon A. Scharff, Andy D. Perkins, Arnold M. Saxton, Bhavesh Borate, Elissa J. Chesler, Lisa K. Branstetter, Michael A. Langston:
Extracting Gene Networks for Low-Dose Radiation Using Graph Theoretical Algorithms. PLoS Comput. Biol. 2(7) (2006) - 2005
- [j2]Örjan Carlborg, D. J. De Koning, Kenneth F. Manly, Elissa J. Chesler, Robert W. Williams, Chris S. Haley:
Methodological aspects of the genetic dissection of gene expression. Bioinform. 21(10): 2383-2393 (2005) - [c2]Elissa J. Chesler, Michael A. Langston:
Combinatorial Genetic Regulatory Network Analysis Tools for High Throughput Transcriptomic Data. Systems Biology and Regulatory Genomics 2005: 150-165 - [c1]Yun Zhang, Faisal N. Abu-Khzam, Nicole E. Baldwin, Elissa J. Chesler, Michael A. Langston, Nagiza F. Samatova:
Genome-Scale Computational Approaches to Memory-Intensive Applications in Systems Biology. SC 2005: 12 - 2003
- [j1]Elissa J. Chesler, Jintao Wang, Lu Lu, Yanhua Qu, Kenneth F. Manly, Robert W. Williams:
Genetic correlates of gene expression in recombinant inbred strains - A relational model system to explore neurobehavioral phenotypes. Neuroinformatics 1(4): 343-357 (2003)
Coauthor Index
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