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Ashutosh Kumar 0001
Person information
- affiliation: RIKEN, Japan
Other persons with the same name
- Ashutosh Kumar — disambiguation page
- Ashutosh Kumar 0002
— University of California, Los Angeles, Computer Science Department, CA, USA (and 1 more)
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Journal Articles
- 2021
- [j17]Aditya K. Padhi
, Ashutosh Kumar, Ken-ichi Haruna, Haruna Sato, Hiroko Tamura, Satoru Nagatoishi, Kouhei Tsumoto, Atushi Yamaguchi, Fumie Iraha, Mihoko Takahashi, Kensaku Sakamoto, Kam Y. J. Zhang:
An integrated computational pipeline for designing high-affinity nanobodies with expanded genetic codes. Briefings Bioinform. 22(6) (2021) - [j16]Francois Berenger
, Ashutosh Kumar
, Kam Y. J. Zhang
, Yoshihiro Yamanishi:
Lean-Docking: Exploiting Ligands' Predicted Docking Scores to Accelerate Molecular Docking. J. Chem. Inf. Model. 61(5): 2341-2352 (2021) - 2019
- [j15]Ashutosh Kumar, Kam Y. J. Zhang
:
Shape similarity guided pose prediction: lessons from D3R Grand Challenge 3. J. Comput. Aided Mol. Des. 33(1): 47-59 (2019) - [j14]Ashutosh Kumar, Kam Y. J. Zhang
:
Improving ligand 3D shape similarity-based pose prediction with a continuum solvent model. J. Comput. Aided Mol. Des. 33(12): 1045-1055 (2019) - 2018
- [j13]Ashutosh Kumar, Kam Y. J. Zhang
:
A cross docking pipeline for improving pose prediction and virtual screening performance. J. Comput. Aided Mol. Des. 32(1): 163-173 (2018) - 2017
- [j12]Masaki Matsuoka, Ashutosh Kumar, Muhammad Muddassar, Akihisa Matsuyama, Minoru Yoshida
, Kam Y. J. Zhang
:
Discovery of Fungal Denitrification Inhibitors by Targeting Copper Nitrite Reductase from Fusarium oxysporum. J. Chem. Inf. Model. 57(2): 203-213 (2017) - 2016
- [j11]Ashutosh Kumar
, Kam Y. J. Zhang:
A pose prediction approach based on ligand 3D shape similarity. J. Comput. Aided Mol. Des. 30(6): 457-469 (2016) - [j10]Ashutosh Kumar
, Kam Y. J. Zhang:
Prospective evaluation of shape similarity based pose prediction method in D3R Grand Challenge 2015. J. Comput. Aided Mol. Des. 30(9): 685-693 (2016) - [j9]Ashutosh Kumar
, Kam Y. J. Zhang:
Application of Shape Similarity in Pose Selection and Virtual Screening in CSARdock2014 Exercise. J. Chem. Inf. Model. 56(6): 965-973 (2016) - [j8]Xi Jiang, Ashutosh Kumar, Tian Liu, Kam Y. J. Zhang, Qing Yang:
A Novel Scaffold for Developing Specific or Broad-Spectrum Chitinase Inhibitors. J. Chem. Inf. Model. 56(12): 2413-2420 (2016) - 2014
- [j7]Arnout R. D. Voet
, Ashutosh Kumar, Francois Berenger
, Kam Y. J. Zhang:
Combining in silico and in cerebro approaches for virtual screening and pose prediction in SAMPL4. J. Comput. Aided Mol. Des. 28(4): 363-373 (2014) - [j6]Ashutosh Kumar, Akihiro Ito, Mikako Hirohama, Minoru Yoshida, Kam Y. J. Zhang:
Identification of SUMO activating enzyme 1 inhibitors utilizing virtual screening approach. J. Cheminformatics 6(S-1): 37 (2014) - [j5]Ashutosh Kumar, Akihiro Ito, Misao Takemoto, Minoru Yoshida
, Kam Y. J. Zhang:
Identification of 1, 2, 5-Oxadiazoles as a New Class of SENP2 Inhibitors Using Structure Based Virtual Screening. J. Chem. Inf. Model. 54(3): 870-880 (2014) - [j4]Ashutosh Kumar, Akihiro Ito, Mikako Hirohama, Minoru Yoshida
, Kam Y. J. Zhang:
Identification of Sumoylation Inhibitors Targeting a Predicted Pocket in Ubc9. J. Chem. Inf. Model. 54(10): 2784-2793 (2014) - 2013
- [j3]Ashutosh Kumar, Akihiro Ito, Mikako Hirohama, Minoru Yoshida
, Kam Y. J. Zhang:
Identification of Sumoylation Activating Enzyme 1 Inhibitors by Structure-Based Virtual Screening. J. Chem. Inf. Model. 53(4): 809-820 (2013) - [j2]Ashutosh Kumar, Kam Y. J. Zhang:
Investigation on the Effect of Key Water Molecules on Docking Performance in CSARdock Exercise. J. Chem. Inf. Model. 53(8): 1880-1892 (2013) - 2012
- [j1]Ashutosh Kumar, Kam Y. J. Zhang:
Computational fragment-based screening using RosettaLigand: the SAMPL3 challenge. J. Comput. Aided Mol. Des. 26(5): 603-616 (2012)
Coauthor Index
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