![](https://dblp.uni-trier.de/img/logo.ua.320x120.png)
![](https://dblp.uni-trier.de/img/dropdown.dark.16x16.png)
![](https://dblp.uni-trier.de/img/peace.dark.16x16.png)
Остановите войну!
for scientists:
![search dblp search dblp](https://dblp.uni-trier.de/img/search.dark.16x16.png)
![search dblp](https://dblp.uni-trier.de/img/search.dark.16x16.png)
default search action
Chiara Romualdi
Person information
Refine list
![note](https://dblp.uni-trier.de/img/note-mark.dark.12x12.png)
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
2020 – today
- 2023
- [j28]Matteo Calgaro
, Chiara Romualdi
, Davide Risso, Nicola Vitulo
:
benchdamic: benchmarking of differential abundance methods for microbiome data. Bioinform. 39(1) (2023) - [j27]Tommaso Becchi, Luca Beltrame
, Laura Mannarino
, Enrica Calura
, Sergio Marchini, Chiara Romualdi:
A pan-cancer landscape of pathogenic somatic copy number variations. J. Biomed. Informatics 147: 104529 (2023) - 2022
- [j26]Giuseppe Cattaneo
, Umberto Ferraro Petrillo
, Raffaele Giancarlo, Francesco Palini, Chiara Romualdi
:
The power of word-frequency-based alignment-free functions: a comprehensive large-scale experimental analysis. Bioinform. 38(4): 925-932 (2022) - 2021
- [j25]Matteo Borella, Graziano Martello, Davide Risso
, Chiara Romualdi
:
PsiNorm: a scalable normalization for single-cell RNA-seq data. Bioinform. 38(1): 164-172 (2021) - [i1]Giuseppe Cattaneo, Umberto Ferraro Petrillo, Raffaele Giancarlo, Francesco Palini, Chiara Romualdi:
The Power of Alignment-Free Histogram-based Functions: a Comprehensive Genome Scale Experimental Analysis - Version 1. CoRR abs/2106.15531 (2021)
2010 – 2019
- 2019
- [j24]Gabriele Sales
, Enrica Calura
, Chiara Romualdi
:
metaGraphite-a new layer of pathway annotation to get metabolite networks. Bioinform. 35(7): 1258-1260 (2019) - [j23]Elisa Salviato
, Vera Djordjilovic
, Monica Chiogna
, Chiara Romualdi
:
SourceSet: A graphical model approach to identify primary genes in perturbed biological pathways. PLoS Comput. Biol. 15(10) (2019) - 2018
- [c2]Vera Djordjilovic
, Monica Chiogna
, Chiara Romualdi
, Elisa Salviato
:
Searching for the Source of Difference: A Graphical Model Approach. CIBB 2018: 131-138 - 2017
- [j22]Elisa Salviato
, Vera Djordjilovic
, Monica Chiogna, Chiara Romualdi
:
simPATHy: a new method for simulating data from perturbed biological PATHways. Bioinform. 33(3): 456-457 (2017) - [c1]Alessandro Palombit, Marco Castellaro
, Massimiliano Calabrese
, Chiara Romualdi
, Francesca Benedetta Pizzini
, Stefania Montemezzi
, Enrico Grisan
, Alessandra Bertoldo:
Cortical Thickness variability in Multiple Sclerosis: The role of lesion segmentation and filling. ISBI 2017: 792-795 - 2016
- [j21]Fabrizio Serra, Chiara Romualdi
, Federico Fogolari
:
Similarity Measures Based on the Overlap of Ranked Genes Are Effective for Comparison and Classification of Microarray Data. J. Comput. Biol. 23(7): 603-614 (2016) - [j20]Marco Moretto
, Paolo Sonego, Nicolas Dierckxsens
, Matteo Brilli
, Luca Bianco
, Daniela Ledezma-Tejeida
, Socorro Gama-Castro, Marco Galardini
, Chiara Romualdi
, Kris Laukens
, Julio Collado-Vides
, Pieter Meysman
, Kristof Engelen:
COLOMBOS v3.0: leveraging gene expression compendia for cross-species analyses. Nucleic Acids Res. 44(Database-Issue): 620-623 (2016) - 2014
- [j19]Paolo G. V. Martini
, Gabriele Sales
, Enrica Calura
, Stefano Cagnin
, Monica Chiogna, Chiara Romualdi
:
timeClip: pathway analysis for time course data without replicates. BMC Bioinform. 15(S-5): S3 (2014) - 2013
- [j18]Gabriele Sales
, Enrica Calura
, Paolo G. V. Martini
, Chiara Romualdi
:
Graphite Web: web tool for gene set analysis exploiting pathway topology. Nucleic Acids Res. 41(Webserver-Issue): 89-97 (2013) - 2012
- [j17]Gabriele Sales
, Enrica Calura
, Duccio Cavalieri
, Chiara Romualdi
:
graphite - a Bioconductor package to convert pathway topology to gene network. BMC Bioinform. 13: 20 (2012) - [j16]Andrea Bisognin
, Gabriele Sales
, Alessandro Coppe, Stefania Bortoluzzi
, Chiara Romualdi
:
MAGIA2: from miRNA and genes expression data integrative analysis to microRNA-transcription factor mixed regulatory circuits (2012 update). Nucleic Acids Res. 40(Web-Server-Issue): 13-21 (2012) - 2011
- [j15]Gabriele Sales
, Chiara Romualdi
:
parmigene - a parallel R package for mutual information estimation and gene network reconstruction. Bioinform. 27(13): 1876-1877 (2011) - [j14]Luca Beltrame
, Enrica Calura
, Razvan R. Popovici, Lisa Rizzetto
, Damariz Rivero Guedez, Michele Donato, Chiara Romualdi
, Sorin Draghici
, Duccio Cavalieri
:
The Biological Connection Markup Language: a SBGN-compliant format for visualization, filtering and analysis of biological pathways. Bioinform. 27(15): 2127-2133 (2011) - [j13]Paolo G. V. Martini
, Davide Risso
, Gabriele Sales
, Chiara Romualdi
, Gerolamo Lanfranchi, Stefano Cagnin
:
Statistical Test of Expression Pattern (STEPath): a new strategy to integrate gene expression data with genomic information in individual and meta-analysis studies. BMC Bioinform. 12: 92 (2011) - 2010
- [j12]Maria Sofia Massa
, Monica Chiogna, Chiara Romualdi
:
Gene set analysis exploiting the topology of a pathway. BMC Syst. Biol. 4: 121 (2010) - [j11]Gabriele Sales
, Alessandro Coppe, Andrea Bisognin
, Marta Biasiolo, Stefania Bortoluzzi
, Chiara Romualdi
:
MAGIA, a web-based tool for miRNA and Genes Integrated Analysis. Nucleic Acids Res. 38(Web-Server-Issue): 352-359 (2010)
2000 – 2009
- 2009
- [j10]Davide Risso
, Maria Sofia Massa
, Monica Chiogna, Chiara Romualdi
:
A modified LOESS normalization applied to microRNA arrays: a comparative evaluation. Bioinform. 25(20): 2685-2691 (2009) - [j9]Andrea Bisognin
, Alessandro Coppe, Francesco Ferrari
, Davide Risso
, Chiara Romualdi
, Silvio Bicciato
, Stefania Bortoluzzi
:
A-MADMAN: Annotation-based microarray data meta-analysis tool. BMC Bioinform. 10 (2009) - [j8]Monica Chiogna, Maria Sofia Massa
, Davide Risso
, Chiara Romualdi
:
A comparison on effects of normalisations in the detection of differentially expressed genes. BMC Bioinform. 10 (2009) - 2008
- [j7]Massimiliano Calabrese
, Massimo Filippi
, Marco Rovaris
, Irene Mattisi, Valentina Bernardi, Matteo Atzori, Alice Favaretto, Luigi Barachino, Luciano Rinaldi, Chiara Romualdi
, Paola Perini, Paolo Gallo:
Morphology and evolution of cortical lesions in multiple sclerosis. A longitudinal MRI study. NeuroImage 42(4): 1324-1328 (2008) - 2007
- [j6]Nicola Vitulo
, Alessandro Vezzi, Chiara Romualdi
, Stefano Campanaro
, Giorgio Valle
:
A global gene evolution analysis on Vibrionaceae family using phylogenetic profile. BMC Bioinform. 8(S-1) (2007) - 2005
- [j5]Davide Campagna, Chiara Romualdi
, Nicola Vitulo
, Micky Del Favero, Matej Lexa
, Nicola Cannata, Giorgio Valle
:
RAP: a new computer program for de novo identification of repeated sequences in whole genomes. Bioinform. 21(5): 582-588 (2005) - [j4]Chiara Romualdi
, Nicola Vitulo
, Micky Del Favero, Gerolamo Lanfranchi:
MIDAW: a web tool for statistical analysis of microarray data. Nucleic Acids Res. 33(Web-Server-Issue): 644-649 (2005) - 2003
- [j3]Stefano Toppo
, Nicola Cannata, Paolo Fontana, Chiara Romualdi
, Paolo Laveder, Emanuela Bertocco, Gerolamo Lanfranchi, Giorgio Valle
:
TRAIT (TRAnscript Integrated Table): a knowledgebase of human skeletal muscle transcripts. Bioinform. 19(5): 661-662 (2003) - 2002
- [j2]Nicola Cannata, Stefano Toppo, Chiara Romualdi
, Giorgio Valle:
Simplifying amino acid alphabets by means of a branch and bound algorithm and substitution matrices. Bioinform. 18(8): 1102-1108 (2002) - 2001
- [j1]Stefania Bortoluzzi
, Fabio d'Alessi, Chiara Romualdi, Gian Antonio Danieli:
Differential expression of genes coding for ribosomal proteins in different human tissues. Bioinform. 17(12): 1152-1157 (2001)
Coauthor Index
![](https://dblp.uni-trier.de/img/cog.dark.24x24.png)
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from ,
, and
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and
to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from .
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2024-06-10 21:26 CEST by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint