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2020 – today
- 2023
[j24]Allan Peter Davis
, Thomas C. Wiegers, Robin J. Johnson, Daniela Sciaky, Jolene Wiegers, Carolyn J. Mattingly:
Comparative Toxicogenomics Database (CTD): update 2023. Nucleic Acids Res. 51(D1): 1257-1262 (2023)- 2021
- [j23]Allan Peter Davis, Cynthia J. Grondin, Robin J. Johnson, Daniela Sciaky, Jolene Wiegers, Thomas C. Wiegers, Carolyn J. Mattingly:
Comparative Toxicogenomics Database (CTD): update 2021. Nucleic Acids Res. 49(Database-Issue): D1138-D1143 (2021)
2010 – 2019
- 2019
- [j22]Allan Peter Davis, Cynthia J. Grondin, Robin J. Johnson, Daniela Sciaky, Roy McMorran, Jolene Wiegers, Thomas C. Wiegers, Carolyn J. Mattingly:
The Comparative Toxicogenomics Database: update 2019. Nucleic Acids Res. 47(Database-Issue): D948-D954 (2019) - 2017
- [j21]Allan Peter Davis, Cynthia J. Grondin, Robin J. Johnson, Daniela Sciaky, Benjamin L. King, Roy McMorran, Jolene Wiegers, Thomas C. Wiegers, Carolyn J. Mattingly:
The Comparative Toxicogenomics Database: update 2017. Nucleic Acids Res. 45(Database-Issue): D972-D978 (2017) - 2016
- [j20]Jiao Li, Yueping Sun, Robin J. Johnson, Daniela Sciaky, Chih-Hsuan Wei, Robert Leaman, Allan Peter Davis, Carolyn J. Mattingly, Thomas C. Wiegers, Zhiyong Lu:
BioCreative V CDR task corpus: a resource for chemical disease relation extraction. Database J. Biol. Databases Curation 2016 (2016) - [j19]Dennis J. Pelletier, Thomas C. Wiegers, Ahmed Enayetallah, C. Kibbey, Mark Gosink, P. Koza-Taylor, Carolyn J. Mattingly, M. Lawton:
ToxEvaluator: an integrated computational platform to aid the interpretation of toxicology study-related findings. Database J. Biol. Databases Curation 2016 (2016) - [j18]Chih-Hsuan Wei, Yifan Peng, Robert Leaman, Allan Peter Davis, Carolyn J. Mattingly, Jiao Li, Thomas C. Wiegers, Zhiyong Lu:
Assessing the state of the art in biomedical relation extraction: overview of the BioCreative V chemical-disease relation (CDR) task. Database J. Biol. Databases Curation 2016 (2016) - 2015
- [j17]Allan Peter Davis, Cynthia J. Grondin, Kelley Lennon-Hopkins, Cynthia A. Saraceni-Richards, Daniela Sciaky, Benjamin L. King, Thomas C. Wiegers, Carolyn J. Mattingly:
The Comparative Toxicogenomics Database's 10th year anniversary: update 2015. Nucleic Acids Res. 43(Database-Issue): 914-920 (2015) - 2014
- [j16]Cecilia N. Arighi, Cathy H. Wu, Kevin Bretonnel Cohen, Lynette Hirschman, Martin Krallinger, Alfonso Valencia, Zhiyong Lu, W. John Wilbur, Thomas C. Wiegers:
BioCreative-IV virtual issue. Database J. Biol. Databases Curation 2014 (2014) - [j15]Donald C. Comeau, Riza Theresa Batista-Navarro, Hong-Jie Dai, Rezarta Islamaj Dogan, Antonio Jimeno-Yepes, Ritu Khare, Zhiyong Lu, Hernani Marques, Carolyn J. Mattingly, Mariana L. Neves, Yifan Peng, Rafal Rak, Fabio Rinaldi, Richard Tzong-Han Tsai, Karin Verspoor, Thomas C. Wiegers, Cathy H. Wu, W. John Wilbur:
BioC interoperability track overview. Database J. Biol. Databases Curation 2014 (2014) - [j14]Thomas C. Wiegers, Allan Peter Davis, Carolyn J. Mattingly:
Web services-based text-mining demonstrates broad impacts for interoperability and process simplification. Database J. Biol. Databases Curation 2014 (2014) - 2013
- [j13]Donald C. Comeau, Rezarta Islamaj Dogan, Paolo Ciccarese, Kevin Bretonnel Cohen, Martin Krallinger, Florian Leitner, Zhiyong Lu, Yifan Peng, Fabio Rinaldi, Manabu Torii, Alfonso Valencia, Karin Verspoor, Thomas C. Wiegers, Cathy H. Wu, W. John Wilbur:
BioC: a minimalist approach to interoperability for biomedical text processing. Database J. Biol. Databases Curation 2013 (2013) - [j12]Allan Peter Davis, Thomas C. Wiegers, Phoebe M. Roberts, Benjamin L. King, Jean M. Lay, Kelley Lennon-Hopkins, Daniela Sciaky, Robin J. Johnson, Heather Keating, Nigel Greene, Robert Hernandez, Kevin J. McConnell, Ahmed Enayetallah, Carolyn J. Mattingly:
A CTD-Pfizer collaboration: manual curation of 88 000 scientific articles text mined for drug-disease and drug-phenotype interactions. Database J. Biol. Databases Curation 2013 (2013) - [j11]Allan Peter Davis, Cynthia G. Murphy, Robin J. Johnson, Jean M. Lay, Kelley Lennon-Hopkins, Cynthia A. Saraceni-Richards, Daniela Sciaky, Benjamin L. King, Michael C. Rosenstein, Thomas C. Wiegers, Carolyn J. Mattingly:
The Comparative Toxicogenomics Database: update 2013. Nucleic Acids Res. 41(Database-Issue): 1104-1114 (2013) - 2012
- [j10]Susan M. Bello, Joel E. Richardson, Allan Peter Davis, Thomas C. Wiegers, Carolyn J. Mattingly, Mary E. Dolan, Cynthia L. Smith, Judith A. Blake, Janan T. Eppig:
Disease model curation improvements at Mouse Genome Informatics. Database J. Biol. Databases Curation 2012 (2012) - [j9]Allan Peter Davis, Robin J. Johnson, Kelley Lennon-Hopkins, Daniela Sciaky, Michael C. Rosenstein, Thomas C. Wiegers, Carolyn J. Mattingly:
Targeted journal curation as a method to improve data currency at the Comparative Toxicogenomics Database. Database J. Biol. Databases Curation 2012 (2012) - [j8]Allan Peter Davis, Thomas C. Wiegers, Michael C. Rosenstein, Carolyn J. Mattingly:
MEDIC: a practical disease vocabulary used at the Comparative Toxicogenomics Database. Database J. Biol. Databases Curation 2012 (2012) - [j7]Lynette Hirschman, Gully A. P. C. Burns, Martin Krallinger, Cecilia N. Arighi, K. Bretonnel Cohen, Alfonso Valencia, Cathy H. Wu, Andrew Chatr-aryamontri, Karen G. Dowell, Eva Huala, Anália Lourenço, Robert S. Nash, Anne-Lise Veuthey, Thomas C. Wiegers, Andrew G. Winter:
Text mining for the biocuration workflow. Database J. Biol. Databases Curation 2012 (2012) - [j6]Thomas C. Wiegers, Allan Peter Davis, Carolyn J. Mattingly:
Collaborative biocuration - text-mining development task for document prioritization for curation. Database J. Biol. Databases Curation 2012 (2012) - [j5]Cathy H. Wu, Cecilia N. Arighi, Kevin Bretonnel Cohen, Lynette Hirschman, Martin Krallinger, Zhiyong Lu, Carolyn J. Mattingly, Alfonso Valencia, Thomas C. Wiegers, W. John Wilbur:
BioCreative-2012 Virtual Issue. Database J. Biol. Databases Curation 2012 (2012) - 2011
- [j4]Allan Peter Davis, Thomas C. Wiegers, Cynthia G. Murphy, Carolyn J. Mattingly:
The curation paradigm and application tool used for manual curation of the scientific literature at the Comparative Toxicogenomics Database. Database J. Biol. Databases Curation 2011 (2011) - [j3]Allan Peter Davis, Benjamin L. King, Susan Mockus, Cynthia G. Murphy, Cynthia A. Saraceni-Richards, Michael C. Rosenstein, Thomas C. Wiegers, Carolyn J. Mattingly:
The Comparative Toxicogenomics Database: update 2011. Nucleic Acids Res. 39(Database-Issue): 1067-1072 (2011) - [c1]Susan M. Bello, Allan Peter Davis, Thomas C. Wiegers, Mary E. Dolan, Cynthia L. Smith, Joel E. Richardson, Judith A. Blake, Carolyn J. Mattingly, Janan T. Eppig:
Waiting for a Robust Disease Ontology: A Merger of OMIM and MeSH as a Practical Interim Solution. ICBO 2011
2000 – 2009
- 2009
- [j2]Thomas C. Wiegers, Allan Peter Davis, K. Bretonnel Cohen, Lynette Hirschman, Carolyn J. Mattingly:
Text mining and manual curation of chemical-gene-disease networks for the Comparative Toxicogenomics Database (CTD). BMC Bioinform. 10: 326 (2009) - [j1]Allan Peter Davis, Cynthia G. Murphy, Cynthia A. Saraceni-Richards, Michael C. Rosenstein, Thomas C. Wiegers, Carolyn J. Mattingly:
Comparative Toxicogenomics Database: a knowledgebase and discovery tool for chemical-gene-disease networks. Nucleic Acids Res. 37(Database-Issue): 786-792 (2009)
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