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Journal Articles
- 2021
[j15]Andrew J. Bass
, John D. Storey:
The optimal discovery procedure for significance analysis of general gene expression studies. Bioinform. 37(3): 367-374 (2021)- 2016
- [j14]Wei Hao, Minsun Song, John D. Storey:
Probabilistic models of genetic variation in structured populations applied to global human studies. Bioinform. 32(5): 713-721 (2016) - 2015
- [j13]Neo Christopher Chung, John D. Storey:
Statistical significance of variables driving systematic variation in high-dimensional data. Bioinform. 31(4): 545-554 (2015) - [j12]Alejandro Ochoa, John D. Storey, Manuel Llinás, Mona Singh:
Beyond the E-Value: Stratified Statistics for Protein Domain Prediction. PLoS Comput. Biol. 11(11) (2015) - 2014
- [j11]David G. Robinson, John D. Storey:
subSeq: Determining Appropriate Sequencing Depth Through Efficient Read Subsampling. Bioinform. 30(23): 3424-3426 (2014) - 2013
- [j10]Andrew E. Jaffe, John D. Storey, Hongkai Ji, Jeffrey T. Leek:
Gene set bagging for estimating the probability a statistically significant result will replicate. BMC Bioinform. 14: 360 (2013) - 2012
- [j9]Jeffrey T. Leek, W. Evan Johnson, Hilary S. Parker, Andrew E. Jaffe, John D. Storey:
The sva package for removing batch effects and other unwanted variation in high-throughput experiments. Bioinform. 28(6): 882-883 (2012) - 2011
- [j8]Sangsoon Woo, Jeffrey T. Leek, John D. Storey:
A computationally efficient modular optimal discovery procedure. Bioinform. 27(4): 509-515 (2011) - 2010
- [j7]Brigham H. Mecham, Peter S. Nelson, John D. Storey:
Supervised normalization of microarrays. Bioinform. 26(10): 1308-1315 (2010) - 2009
- [j6]Lukas Käll, John D. Storey, William Stafford Noble:
QVALITY: non-parametric estimation of q-values and posterior error probabilities. Bioinform. 25(7): 964-966 (2009) - 2008
- [j5]Lin S. Chen, John D. Storey:
Eigen-R2 for dissecting variation in high-dimensional studies. Bioinform. 24(19): 2260-2262 (2008) - [j4]Shameek Biswas, John D. Storey, Joshua M. Akey:
Mapping gene expression quantitative trait loci by singular value decomposition and independent component analysis. BMC Bioinform. 9 (2008) - 2006
- [j3]Jeffrey T. Leek, Eva Monsen, Alan R. Dabney, John D. Storey:
EDGE: extraction and analysis of differential gene expression. Bioinform. 22(4): 507-508 (2006) - [j2]Jeffrey T. Leek, Eva Monsen, Alan R. Dabney, John D. Storey:
EDGE: extraction and analysis of differential gene expression. Bioinform. 22(11): 1412 (2006) - 2001
- [j1]John D. Storey, David Siegmund:
Approximate P-Values for Local Sequence Alignments: Numerical Studies. J. Comput. Biol. 8(5): 549-556 (2001)
Conference and Workshop Papers
- 2008
- [c1]Lukas Käll, John D. Storey, William Stafford Noble:
Non-parametric estimation of posterior error probabilities associated with peptides identified by tandem mass spectrometry. ECCB 2008: 42-48
Reference Works
- 2011
- [r1]John D. Storey:
False Discovery Rate. International Encyclopedia of Statistical Science 2011: 504-508
Coauthor Index
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