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ORCIDManolis Maragkakis
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2020 – today
- 2021
[j11]Christopher T. Lee, Manolis Maragkakis
:
SamQL: a structured query language and filtering tool for the SAM/BAM file format. BMC Bioinform. 22(1): 474 (2021)
2010 – 2019
- 2017
- [j10]R. Daniel Kortschak, Josh Bleecher Snyder, Manolis Maragkakis, David L. Adelson:
bíogo: a simple high-performance bioinformatics toolkit for the Go language. J. Open Source Softw. 2(10): 167 (2017) - 2013
- [j9]Maria D. Paraskevopoulou, Georgios K. Georgakilas, Nikos Kostoulas, Martin Reczko, Manolis Maragkakis, Theodore M. Dalamagas, Artemis G. Hatzigeorgiou:
DIANA-LncBase: experimentally verified and computationally predicted microRNA targets on long non-coding RNAs. Nucleic Acids Res. 41(Database-Issue): 239-245 (2013) - 2012
- [j8]Martin Reczko, Manolis Maragkakis, Panagiotis Alexiou, Ivo Grosse, Artemis G. Hatzigeorgiou:
Functional microRNA targets in protein coding sequences. Bioinform. 28(6): 771-776 (2012) - [j7]Thanasis Vergoulis, Ioannis S. Vlachos, Panagiotis Alexiou, George Georgakilas, Manolis Maragkakis, Martin Reczko, Stefanos Gerangelos, Nectarios Koziris, Theodore Dalamagas, Artemis G. Hatzigeorgiou:
TarBase 6.0: capturing the exponential growth of miRNA targets with experimental support. Nucleic Acids Res. 40(Database-Issue): 222-229 (2012) - [j6]Ioannis S. Vlachos, Nikos Kostoulas, Thanasis Vergoulis, Georgios K. Georgakilas, Martin Reczko, Manolis Maragkakis, Maria D. Paraskevopoulou, Kostantinos Prionidis, Theodore Dalamagas, Artemis G. Hatzigeorgiou:
DIANA miRPath v.2.0: investigating the combinatorial effect of microRNAs in pathways. Nucleic Acids Res. 40(Web-Server-Issue): 498-504 (2012) - [c3]Thanasis Vergoulis, Michail Alexakis, Theodore Dalamagas, Manolis Maragkakis, Artemis G. Hatzigeorgiou, Timos K. Sellis:
TARCLOUD: A Cloud-Based Platform to Support miRNA Target Prediction. SSDBM 2012: 628-633 - 2011
- [j5]Manolis Maragkakis, Thanasis Vergoulis, Panagiotis Alexiou, Martin Reczko, Kyriaki Plomaritou, Mixail Gousis, Kornilios Kourtis, Nectarios Koziris, Theodore Dalamagas, Artemis G. Hatzigeorgiou:
DIANA-microT Web server upgrade supports Fly and Worm miRNA target prediction and bibliographic miRNA to disease association. Nucleic Acids Res. 39(Web-Server-Issue): 145-148 (2011) - 2010
- [c2]Jan Grau, Daniel Arend, Ivo Grosse, Artemis G. Hatzigeorgiou, Jens Keilwagen, Manolis Maragkakis, Claus Weinholdt, Stefan Posch:
Predicting miRNA targets utilizing an Extended Profile HMM. GCB 2010: 81-91 - [c1]Theodore Dalamagas, Tryfon Farmakakis, Manolis Maragkakis, Artemis G. Hatzigeorgiou:
FreePub: Collecting and Organizing Scientific Material Using Mindmaps. SWAT4LS 2010 - [i1]Theodore Dalamagas, Tryfon Farmakakis, Manolis Maragkakis, Artemis G. Hatzigeorgiou:
FreePub: Collecting and Organizing Scientific Material Using Mindmaps. CoRR abs/1012.1623 (2010)
2000 – 2009
- 2009
- [j4]Giorgos L. Papadopoulos, Panagiotis Alexiou, Manolis Maragkakis, Martin Reczko, Artemis G. Hatzigeorgiou:
DIANA-mirPath: Integrating human and mouse microRNAs in pathways. Bioinform. 25(15): 1991-1993 (2009) - [j3]Panagiotis Alexiou, Manolis Maragkakis, Giorgos L. Papadopoulos, Martin Reczko, Artemis G. Hatzigeorgiou:
Lost in translation: an assessment and perspective for computational microRNA target identification. Bioinform. 25(23): 3049-3055 (2009) - [j2]Manolis Maragkakis, Panagiotis Alexiou, Giorgos L. Papadopoulos, Martin Reczko, Theodore Dalamagas, Giorgos Giannopoulos, George I. Goumas, Evangelos Koukis, Kornilios Kourtis, Victor A. Simossis, Praveen Sethupathy, Thanasis Vergoulis, Nectarios Koziris, Timos K. Sellis, Panayotis Tsanakas, Artemis G. Hatzigeorgiou:
Accurate microRNA target prediction correlates with protein repression levels. BMC Bioinform. 10: 295 (2009) - [j1]Manolis Maragkakis, Martin Reczko, Victor A. Simossis, Panagiotis Alexiou, Giorgos L. Papadopoulos, Theodore Dalamagas, Giorgos Giannopoulos, Georgios I. Goumas, Evangelos Koukis, Kornilios Kourtis, Thanasis Vergoulis, Nectarios Koziris, Timos K. Sellis, Panayotis Tsanakas, Artemis G. Hatzigeorgiou:
DIANA-microT web server: elucidating microRNA functions through target prediction. Nucleic Acids Res. 37(Web-Server-Issue): 273-276 (2009)
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