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Stephen R. Holbrook
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2000 – 2009
- 2007
- [c7]Patricia Francis-Lyon, Nello Cristianini, Stephen R. Holbrook:
Terminator Detection by Support Vector Machine Utilizing a Stochastic Context-Free Grammar. CIBCB 2007: 170-177 - 2006
- [j6]Chunlin Wang, Chris H. Q. Ding, Richard F. Meraz, Stephen R. Holbrook:
PSoL: a positive sample only learning algorithm for finding non-coding RNA genes. Bioinform. 22(21): 2590-2596 (2006) - [j5]Chris H. Q. Ding, Xiaofeng He, Hui Xiong, Hanchuan Peng, Stephen R. Holbrook:
Transitive closure and metric inequality of weighted graphs: detecting protein interaction modules using cliques. Int. J. Data Min. Bioinform. 1(2): 162-177 (2006) - [j4]Liliana R. Stefan, Rui Zhang, Aaron G. Levitan, Donna K. Hendrix, Steven E. Brenner, Stephen R. Holbrook:
MeRNA: a database of metal ion binding sites in RNA structures. Nucleic Acids Res. 34(Database-Issue): 131-134 (2006) - [c6]Chris H. Q. Ding, Ya Zhang, Tao Li, Stephen R. Holbrook:
Biclustering Protein Complex Interactions with a Biclique Finding Algorithm. ICDM 2006: 178-187 - 2005
- [j3]Ya Zhang, John-Marc Chandonia
, Chris H. Q. Ding, Stephen R. Holbrook:
Comparative mapping of sequence-based and structure-based protein domains. BMC Bioinform. 6: 77 (2005) - [c5]Yan Karklin, Richard F. Meraz, Stephen R. Holbrook:
Classification of Non-Coding RNA Using Graph Representations of Secondary Structure. Pacific Symposium on Biocomputing 2005: 5-16 - [c4]Hui Xiong, Xiaofeng He, Chris H. Q. Ding, Ya Zhang, Vipin Kumar, Stephen R. Holbrook:
Identification of Functional Modules in Protein Complexes via Hyperclique Pattern Discovery. Pacific Symposium on Biocomputing 2005 - 2004
- [j2]Makio Tamura, Donna K. Hendrix, Peter S. Klosterman, Nancy R. B. Schimmelman, Steven E. Brenner, Stephen R. Holbrook:
SCOR: Structural Classification of RNA, version 2.0. Nucleic Acids Res. 32(Database-Issue): 182-184 (2004) - [c3]Richard F. Meraz, Xiaofeng He, Chris H. Q. Ding, Stephen R. Holbrook:
Positive Sample Only Learning (PSOL) for Predicting RNA Genes in E. coli. CSB 2004: 535-538 - [c2]Chris H. Q. Ding, Richard F. Meraz, Xiaofeng He, Stephen R. Holbrook:
Contraction Graphs for Representation and Analysis of RNA Secondary Structure. CSB 2004: 716-717 - 2002
- [j1]Peter S. Klosterman, Makio Tamura, Stephen R. Holbrook, Steven E. Brenner:
SCOR: a Structural Classification of RNA database. Nucleic Acids Res. 30(1): 392-394 (2002)
1990 – 1999
- 1993
- [c1]Inna Dubchak, Stephen R. Holbrook, Sung-Hou Kim:
Comparison of Two Variations of Neural Network Approaches to the Prediction of Protein Folding Pattern. ISMB 1993: 118-126
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