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Journal Articles
- 2018
[j18]Svetlana Surkova
, Elena Golubkova, Ludmila Mamon, Maria Samsonova:
Dynamic maternal gradients and morphogenetic networks in Drosophila early embryo. Biosyst. 173: 207-213 (2018)- 2017
- [j17]Konstantin Kozlov, Vera Kosheverova, Rimma Kamentseva, Marianna Kharchenko, Alena Sokolkova, Elena Kornilova, Maria Samsonova:
Quantitative analysis of the heterogeneous population of endocytic vesicles. J. Bioinform. Comput. Biol. 15(2): 1750008:1-1750008:19 (2017) - 2016
- [j16]Konstantin Kozlov, Alexander M. Samsonov, Maria Samsonova:
A software for parameter optimization with Differential Evolution Entirely Parallel method. PeerJ Comput. Sci. 2: e74 (2016) - 2012
- [j15]Vitaly V. Gursky, Svetlana Surkova, Maria Samsonova:
Mechanisms of developmental robustness. Biosyst. 109(3): 329-335 (2012) - [j14]Konstantin Kozlov, Svetlana Surkova, Ekaterina M. Myasnikova, John Reinitz, Maria Samsonova:
Modeling of Gap Gene Expression in Drosophila Kruppel Mutants. PLoS Comput. Biol. 8(8) (2012) - 2011
- [j13]Ekaterina M. Myasnikova, Svetlana Surkova, Grigory Stein, Andrei Pisarev, Maria Samsonova:
A regression system for estimation of errors introduced by confocal imaging into gene expression data in situ. BMC Bioinform. 12: 320 (2011) - [j12]Vitaly V. Gursky, Lena Panok, Ekaterina M. Myasnikova, Manu, Maria Samsonova, John Reinitz, Alexander M. Samsonov:
Mechanisms of gap gene expression canalization in the Drosophila blastoderm. BMC Syst. Biol. 5: 118 (2011) - 2009
- [j11]Ekaterina M. Myasnikova, Svetlana Surkova, Lena Panok, Maria Samsonova, John Reinitz:
Estimation of errors introduced by confocal imaging into the data on segmentation gene expression in Drosophila. Bioinform. 25(3): 346-352 (2009) - [j10]Andrei Pisarev, Ekaterina Poustelnikova, Maria Samsonova, John Reinitz:
FlyEx, the quantitative atlas on segmentation gene expression at cellular resolution. Nucleic Acids Res. 37(Database-Issue): 560-566 (2009) - [j9]Manu, Svetlana Surkova, Alexander V. Spirov, Vitaly V. Gursky, Hilde Janssens, Ah-Ram Kim, Ovidiu Radulescu, Carlos E. Vanario-Alonso, David H. Sharp, Maria Samsonova, John Reinitz:
Canalization of Gene Expression and Domain Shifts in the Drosophila Blastoderm by Dynamical Attractors. PLoS Comput. Biol. 5(3) (2009) - 2005
- [j8]Andrei Pisarev, Ekaterina Poustelnikova, Konstantin Kozlov, Ekaterina M. Myasnikova, Maria Samsonova, John Reinitz:
ImageServer, a Tool for On-line Processing and Analysis of Biological Images. J. Integr. Bioinform. 2(1) (2005) - 2004
- [j7]Ekaterina Poustelnikova, Andrei Pisarev, Maxim Blagov, Maria Samsonova, John Reinitz:
A database for management of gene expression data in situ. Bioinform. 20(14): 2212-2221 (2004) - [j6]Andrei Pisarev, Ekaterina Poustelnikova, Maria Samsonova, Peter Baumann:
Erratum to "Mooshka: a system for the management of multidimensional gene expression data in situ": [Information Systems 28(4) (2003) 269-285]. Inf. Syst. 29(1): 93 (2004) - 2003
- [j5]Andrei Pisarev, Ekaterina Poustelnikova, Maria Samsonova, Peter Baumann:
Mooshka: a system for the management of multidimensional gene expression data in situ. Inf. Syst. 28(4): 269-285 (2003) - 2002
- [j4]Konstantin Kozlov, Ekaterina M. Myasnikova, Andrei Pisarev, Maria Samsonova, John Reinitz:
A method for two-dimensional registration and construction of the two-dimensional atlas of gene expression patterns in situ. Silico Biol. 2(2): 125-141 (2002) - 2001
- [j3]Ekaterina M. Myasnikova, Anastassia Samsonova, Konstantin Kozlov, Maria Samsonova, John Reinitz:
Registration of the expression patterns of Drosophila segmentation genes by two independent methods. Bioinform. 17(1): 3-12 (2001) - 1998
- [j2]Vassili N. Serov, Alexander V. Spirov, Maria Samsonova:
Graphical interface to the genetic network database GeNet. Bioinform. 14(6): 546-547 (1998) - 1991
- [j1]Philip Taylor, Paul Rosenberg, Maria Samsonova:
A new method for finding long consensus patterns in nucleic acid sequences. Comput. Appl. Biosci. 7(4): 495-500 (1991)
Conference and Workshop Papers
- 2013
- [c11]Konstantin Kozlov, Nikita Ivanisenko, Vladimir A. Ivanisenko, Nikolay A. Kolchanov, Maria Samsonova, Alexander M. Samsonov:
Enhanced Differential Evolution Entirely Parallel Method for Biomedical Applications. PaCT 2013: 409-416 - 2009
- [c10]Ekaterina M. Myasnikova, Svetlana Surkova, Maria Samsonova, John Reinitz:
Estimation of Errors in Gene Expression Data Introduced by Diffractive Blurring of Confocal Images. IMVIP 2009: 53-58 - 2006
- [c9]Maria Samsonova, Andrei Pisarev, Konstantin Kozlov, Ekaterina Poustelnikova, Arthur Tkachenko:
An Information Management System for Collaboration Within Distributed Working Environment. DILS 2006: 204-215 - 2003
- [c8]Maria Samsonova, Andrei Pisarev, Maxim Blagov:
Processing of natural language queries to a relational database. ISMB (Supplement of Bioinformatics) 2003: 241-249 - 2002
- [c7]Ekaterina M. Myasnikova, Anastassia Samsonova, Maria Samsonova, John Reinitz:
Support vector regression applied to the determination of the developmental age of a Drosophila embryo from its segmentation gene expression patterns. ISMB 2002: 87-95 - 2001
- [c6]Igor N. Aizenberg, Ekaterina M. Myasnikova, Maria Samsonova, John Reinitz:
Application of the Neural Networks Based on Multi-valued Neurons to Classification of the Images of Gene Expression Patterns. Fuzzy Days 2001: 291-304 - [c5]Igor N. Aizenberg, Ekaterina M. Myasnikova, Maria Samsonova:
Classification of the Images of Gene Expression Patterns Using Neural Networks Based on Multi-valued Neurons. IWANN (2) 2001: 219-226 - 2000
- [c4]Maria Samsonova, Ekaterina Poustelnikova, Andrei Pisarev, John Reinitz:
Design of the Integrated Atlas of Segmentation Gene Expression in Situ. German Conference on Bioinformatics 2000: 125-132 - [c3]Konstantin Kozlov, Ekaterina M. Myasnikova, Maria Samsonova, John Reinitz, David Kosman:
Fast Redundant Dyadic Wavelet Transform in Application to Spatial Registration of the Expression Patterns of Drosophila Segmentation Genes. ICPR 2000: 3463-3466 - 1999
- [c2]Ekaterina M. Myasnikova, David Kosman, John Reinitz, Maria Samsonova:
Spatio-Temporal Registration of the Expression Patterns of Drosophila Segmentation Genes. ISMB 1999: 195-201 - [c1]Maria Samsonova, Vassili N. Serov:
NetWork: An Interactive Interface to the Tools for Analysis of Genetic Network Structure and Dynamics. Pacific Symposium on Biocomputing 1999: 102-111
Parts in Books or Collections
- 1999
- [p1]Vassili N. Serov, Olga V. Kirillova, Maria Samsonova:
NetWork: a Tool for Visualization of Genetic Network Structure and Dynamics. Visual Representations and Interpretations 1999: 156-160
Coauthor Index
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