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2020 – today
- 2023
[j9]Shide Liang
, Chi Zhang, Mingfu Zhu:
Ab Initio Prediction of 3-D Conformations for Protein Long Loops with High Accuracy and Applications to Antibody CDRH3 Modeling. J. Chem. Inf. Model. 63(23): 7568-7577 (2023)- 2021
- [j8]Shide Liang, Zhixiu Li, Jian Zhan, Yaoqi Zhou:
De novo protein design by an energy function based on series expansion in distance and orientation dependence. Bioinform. 38(1): 86-93 (2021)
2010 – 2019
- 2014
- [j7]Kazuo Yamashita, Kazuyoshi Ikeda, Karlou Mar Amada, Shide Liang, Yuko Tsuchiya, Haruki Nakamura, Hiroki Shirai, Daron M. Standley:
Kotai Antibody Builder: automated high-resolution structural modeling of antibodies. Bioinform. 30(22): 3279-3280 (2014) - [j6]Shide Liang, Chi Zhang, Yaoqi Zhou:
LEAP: Highly accurate prediction of protein loop conformations by integrating coarse-grained sampling and optimized energy scores with all-atom refinement of backbone and side chains. J. Comput. Chem. 35(4): 335-341 (2014) - 2013
- [j5]Shide Liang, Dandan Zheng, Daron M. Standley, Huarong Guo, Chi Zhang:
A novel function prediction approach using protein overlap networks. BMC Syst. Biol. 7: 61 (2013) - 2011
- [j4]Shide Liang, Dandan Zheng, Chi Zhang, Daron M. Standley:
Fast and accurate prediction of protein side-chain conformations. Bioinform. 27(20): 2913-2914 (2011) - [j3]Shide Liang, Yaoqi Zhou, Nick V. Grishin, Daron M. Standley:
Protein side chain modeling with orientation-dependent atomic force fields derived by series expansions. J. Comput. Chem. 32(8): 1680-1686 (2011) - 2010
- [j2]Shide Liang, Dandan Zheng, Daron M. Standley, Bo Yao, Martin Zacharias, Chi Zhang:
EPSVR and EPMeta: prediction of antigenic epitopes using support vector regression and multiple server results. BMC Bioinform. 11: 381 (2010)
2000 – 2009
- 2009
- [j1]Shide Liang, Dandan Zheng, Chi Zhang, Martin Zacharias:
Prediction of antigenic epitopes on protein surfaces by consensus scoring. BMC Bioinform. 10: 302 (2009)
Coauthor Index
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