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Asger Hobolth
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2020 – today
- 2024
- [i1]Ida Egendal, Rasmus Froberg Brøndum, Marta Pelizzola, Asger Hobolth, Martin Bøgsted:
On the Relation Between Autoencoders and Non-negative Matrix Factorization, and Their Application for Mutational Signature Extraction. CoRR abs/2405.07879 (2024) - 2023
- [j13]Marta Pelizzola
, Ragnhild Laursen, Asger Hobolth
:
Model selection and robust inference of mutational signatures using Negative Binomial non-negative matrix factorization. BMC Bioinform. 24(1): 187 (2023) - [j12]Iker Rivas-González
, Lars Nørvang Andersen
, Asger Hobolth
:
PhaseTypeR: an R package for phase-type distributions in population genetics. J. Open Source Softw. 8(83): 5054 (2023) - 2022
- [j11]Tobias Røikjer, Asger Hobolth
, Kasper Munch
:
Graph-based algorithms for phase-type distributions. Stat. Comput. 32(6): 103 (2022) - [j10]Ragnhild Laursen, Asger Hobolth
:
A Sampling Algorithm to Compute the Set of Feasible Solutions for NonNegative Matrix Factorization with an Arbitrary Rank. SIAM J. Matrix Anal. Appl. 43(1): 257-273 (2022) - 2020
- [j9]Esther Rheinbay, Morten Muhlig Nielsen, Federico Abascal, Jeremiah Wala, Ofer Shapira, Grace Tiao, Henrik Hornshøj, Julian M. Hess, Randi Istrup Juul, Ziao Lin, Lars Feuerbach, Radhakrishnan Sabarinathan, Tobias Madsen, Jaegil Kim, Loris Mularoni, Shimin Shuai, Andrés Lanzós, Carl Herrmann
, Yosef E. Maruvka, Ciyue Shen, Samirkumar B. Amin
, Pratiti Bandopadhayay, Johanna Bertl
, Keith A. Boroevich
, John Busanovich, Joana Carlevaro-Fita, Dimple Chakravarty, Calvin Wing Yiu Chan, David Craft, Priyanka Dhingra, Klev Diamanti
, Nuno A. Fonseca
, Abel Gonzalez-Perez
, Qianyun Guo, Mark P. Hamilton, Nicholas J. Haradhvala, Chen Hong, Keren Isaev, Todd A. Johnson, Malene Juul, André Kahles, Abdullah Kahraman, Youngwook Kim, Jan Komorowski, Kiran Kumar, Sushant Kumar, Donghoon Lee
, Kjong-Van Lehmann, Yilong Li, Eric Minwei Liu, Lucas Lochovsky, Keunchil Park, Oriol Pich, Nicola D. Roberts, Gordon Saksena, Steven E. Schumacher, Nikos Sidiropoulos, Lina Sieverling, Nasa Sinnott-Armstrong, Chip Stewart, David Tamborero, Jose M. C. Tubio, Husen M. Umer, Liis Uusküla-Reimand, Claes Wadelius, Lina Wadi, Xiaotong Yao, Cheng-Zhong Zhang, Jing Zhang, James E. Haber, Asger Hobolth, Marcin Imielinski, Manolis Kellis, Michael S. Lawrence, Christian von Mering, Hidewaki Nakagawa, Benjamin J. Raphael, Mark A. Rubin
, Chris Sander, Lincoln D. Stein, Joshua M. Stuart, Tatsuhiko Tsunoda, David A. Wheeler, Rory Johnson, Jüri Reimand
, Mark Gerstein, Ekta Khurana, Peter J. Campbell, Núria López-Bigas, Gary D. Bader, Jonathan Barenboim, Rameen Beroukhim, Søren Brunak, Ken Chen, Jung Kyoon Choi, Jordi Deu-Pons, J. Lynn Fink
, Joan Frigola, Carlo Gambacorti Passerini, Dale W. Garsed, Gad Getz, Ivo Glynne Gut, David Haan, Arif Ozgun Harmanci, Mohamed Helmy, Ermin Hodzic, José M. G. Izarzugaza, Jong K. Kim, Jan O. Korbel, Erik Larsson, Shantao Li, Xiaotong Li, Shaoke Lou, Kathleen Marchal
, Iñigo Martincorena, Alexander Martínez-Fundichely, Patrick D. McGillivray, William Meyerson, Ferran Muiños, Marta Paczkowska, Kiejung Park, Jakob Skou Pedersen
, Tirso Pons
, Sergio Pulido-Tamayo, Iker Reyes-Salazar, Matthew A. Reyna, Carlota Rubio-Perez, Süleyman Cenk Sahinalp, Leonidas Salichos, Mark Shackleton, Raunak Shrestha, Alfonso Valencia, Miguel Vazquez, Lieven P. C. Verbeke, Jiayin Wang, Jonathan Warrell, Sebastian M. Waszak
, Joachim Weischenfeldt, Guanming Wu, Jun Yu, Xuanping Zhang, Yan Zhang, Zhongming Zhao, Lihua Zou, Kadir C. Akdemir, Eva G. Alvarez, Adrian Baez-Ortega, Paul C. Boutros, David D. L. Bowtell, Benedikt Brors, Kathleen H. Burns, Kin Chan, Isidro Cortés-Ciriano
, Ana Dueso-Barroso, Andrew J. Dunford, Paul A. Edwards, Xavier Estivill, Dariush Etemadmoghadam, Milana Frenkel-Morgenstern
, Dmitry A. Gordenin, Barbara Hutter, David T. W. Jones, Young Seok Ju, Marat D. Kazanov
, Leszek J. Klimczak, Youngil Koh, Eunjung Alice Lee, Jake June-Koo Lee, Andy G. Lynch
, Geoff MacIntyre, Florian Markowetz, Matthew Meyerson, Satoru Miyano, Fabio C. P. Navarro, Stephan Ossowski, Peter J. Park, John V. Pearson, Montserrat Puiggròs, Karsten Rippe, Steven A. Roberts, Bernardo Rodriguez-Martin, Ralph Scully, David Torrents, Izar Villasante, Nicola Waddell, Jeremiah A. Wala, Lixing Yang, Sung-Soo Yoon, Jorge Zamora:
Analyses of non-coding somatic drivers in 2,658 cancer whole genomes. Nat. 578(7793): 102-111 (2020)
2010 – 2019
- 2019
- [j8]Malene Juul
, Tobias Madsen, Qianyun Guo, Johanna Bertl
, Asger Hobolth
, Manolis Kellis, Jakob Skou Pedersen
:
ncdDetect2: improved models of the site-specific mutation rate in cancer and driver detection with robust significance evaluation. Bioinform. 35(2): 189-199 (2019) - 2018
- [j7]Morten Muhlig Nielsen, Paula Tataru, Tobias Madsen, Asger Hobolth
, Jakob Skou Pedersen
:
Regmex: a statistical tool for exploring motifs in ranked sequence lists from genomics experiments. Algorithms Mol. Biol. 13(1): 17:1-17:11 (2018) - [j6]Johanna Bertl
, Qianyun Guo, Malene Juul, Søren Besenbacher
, Morten Muhlig Nielsen, Henrik Hornshøj, Jakob Skou Pedersen
, Asger Hobolth
:
A site specific model and analysis of the neutral somatic mutation rate in whole-genome cancer data. BMC Bioinform. 19(1): 147:1-147:15 (2018) - 2017
- [j5]Tobias Madsen
, Asger Hobolth
, Jens Ledet Jensen
, Jakob Skou Pedersen
:
Significance evaluation in factor graphs. BMC Bioinform. 18(1): 199:1-199:12 (2017) - 2016
- [c1]Svend V. Nielsen, Simon Simonsen, Asger Hobolth:
Inferring Population Genetic Parameters: Particle Filtering, HMM, Ripley's K-Function or Runs of Homozygosity? WABI 2016: 234-245 - 2011
- [j4]Paula Tataru
, Asger Hobolth
:
Comparison of methods for calculating conditional expectations of sufficient statistics for continuous time Markov chains. BMC Bioinform. 12: 465 (2011)
2000 – 2009
- 2005
- [j3]Asger Hobolth, Jens Ledet Jensen
:
Applications of Hidden Markov Models for Characterization of Homologous DNA Sequences with a Common Gene. J. Comput. Biol. 12(2): 186-203 (2005) - [j2]Ole F. Christensen
, Asger Hobolth, Jens Ledet Jensen
:
Pseudo-Likelihood Analysis of Codon Substitution Models with Neighbor-Dependent Rates. J. Comput. Biol. 12(9): 1166-1182 (2005) - 2002
- [j1]Asger Hobolth, Jan Pedersen, Eva Bjørn Vedel Jensen
:
A Deformable Template Model, with Special Reference to Elliptical Templates. J. Math. Imaging Vis. 17(2): 131-137 (2002)
Coauthor Index
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last updated on 2024-08-07 22:32 CEST by the dblp team
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