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Jens Reeder
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2010 – 2019
- 2017
- [j6]Jennifer A. Tom, Jens Reeder, William F. Forrest, Robert R. Graham, Julie Hunkapiller, Timothy W. Behrens, Tushar R. Bhangale:
Identifying and mitigating batch effects in whole genome sequencing data. BMC Bioinform. 18(1): 351 (2017) - 2016
- [p1]Thomas D. Wu, Jens Reeder, Michael Lawrence, Gabe Becker, Matthew J. Brauer:
GMAP and GSNAP for Genomic Sequence Alignment: Enhancements to Speed, Accuracy, and Functionality. Statistical Genomics 2016: 283-334
2000 – 2009
- 2008
- [j5]Stefan Janssen, Jens Reeder, Robert Giegerich:
Shape based indexing for faster search of RNA family databases. BMC Bioinform. 9 (2008) - 2007
- [j4]Jens Reeder, Peter Steffen, Robert Giegerich:
pknotsRG: RNA pseudoknot folding including near-optimal structures and sliding windows. Nucleic Acids Res. 35(Web-Server-Issue): 320-324 (2007) - [c1]Janina Reeder, Jens Reeder, Robert Giegerich:
Locomotif: from graphical motif description to RNA motif search. ISMB/ECCB (Supplement of Bioinformatics) 2007: 392-400 - 2006
- [j3]Peter Steffen, Björn Voß, Marc Rehmsmeier, Jens Reeder, Robert Giegerich:
RNAshapes: an integrated RNA analysis package based on abstract shapes. Bioinform. 22(4): 500-503 (2006) - 2005
- [j2]Jens Reeder, Robert Giegerich:
Consensus shapes: an alternative to the Sankoff algorithm for RNA consensus structure prediction. Bioinform. 21(17): 3516-3523 (2005) - 2004
- [j1]Jens Reeder, Robert Giegerich:
Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics. BMC Bioinform. 5: 104 (2004)
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