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Tzu-Hao Chang
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2020 – today
- 2022
- [j23]Yi-Gang Chen
, Lantian Yao, Yun Tang, Jhih-Hua Jhong
, Jingting Wan, Jingyue Chang, Shi-Dong Cui, Yijun Luo, Xiao-Xuan Cai, Wenshuo Li, Qi Chen, Hsi-Yuan Huang, Zhuo Wang
, Weiming Chen, Tzu-Hao Chang, Feng-Xiang Wei, Tzong-Yi Lee
, Hsien-Da Huang
:
CircNet 2.0: an updated database for exploring circular RNA regulatory networks in cancers. Nucleic Acids Res. 50(D1): 93-101 (2022) - [j22]Jhih-Hua Jhong
, Lantian Yao, Yuxuan Pang
, Zhongyan Li, Chia-Ru Chung
, Rulan Wang, Shangfu Li, Wenshuo Li, Mengqi Luo
, Renfei Ma
, Yuqi Huang, Xiaoning Zhu, Jiahong Zhang, Hexiang Feng, Qifan Cheng, Chunxuan Wang, Kun Xi, Li-Ching Wu, Tzu-Hao Chang, Jorng-Tzong Horng, Lizhe Zhu
, Ying-Chih Chiang, Zhuo Wang
, Tzong-Yi Lee
:
dbAMP 2.0: updated resource for antimicrobial peptides with an enhanced scanning method for genomic and proteomic data. Nucleic Acids Res. 50(D1): 460-470 (2022) - 2020
- [j21]Tzong-Yi Lee, Kai-Yao Huang, Cheng-Hsiang Chuang, Cheng-Yang Lee, Tzu-Hao Chang:
Incorporating deep learning and multi-omics autoencoding for analysis of lung adenocarcinoma prognostication. Comput. Biol. Chem. 87: 107277 (2020)
2010 – 2019
- 2018
- [j20]Shun-Long Weng, Kai-Yao Huang, Julia Tzu-Ya Weng, Fang-Yu Hung, Tzu-Hao Chang, Tzong-Yi Lee:
Genome-wide discovery of viral microRNAs based on phylogenetic analysis and structural evolution of various human papillomavirus subtypes. Briefings Bioinform. 19(6): 1102-1114 (2018) - 2017
- [j19]Shun-Long Weng, Kai-Yao Huang, Fergie Joanda Kaunang, Chien-Hsun Huang, Hui-Ju Kao, Tzu-Hao Chang, Hsin-Yao Wang
, Jang-Jih Lu, Tzong-Yi Lee:
Investigation and identification of protein carbonylation sites based on position-specific amino acid composition and physicochemical features. BMC Bioinform. 18(S-3): 125-141 (2017) - [j18]Kai-Yao Huang, Tzu-Hao Chang, Jhih-Hua Jhong, Yu-Hsiang Chi, Wen-Chi Li, Chien-Lung Chan, K. Robert Lai, Tzong-Yi Lee:
Identification of natural antimicrobial peptides from bacteria through metagenomic and metatranscriptomic analysis of high-throughput transcriptome data of Taiwanese oolong teas. BMC Syst. Biol. 11(S-7): 29-44 (2017) - [j17]Usman Iqbal, Tzu-Hao Chang, Phung Anh Nguyen, Syed Abdul Shabbir
, Hsuan-Chia Yang
, Chih-Wei Huang
, Suleman Atique
, Wei-Chung Yang, Max Moldovan
, Wen-Shan Jian
, Min-Huei Hsu, Yun Yen, Yu-Chuan (Jack) Li
:
Benzodiazepines use and breast cancer risk: A population-based study and gene expression profiling evidence. J. Biomed. Informatics 74: 85-91 (2017) - 2016
- [j16]Van-Minh Bui, Shun-Long Weng, Cheng-Tsung Lu, Tzu-Hao Chang, Julia Tzu-Ya Weng, Tzong-Yi Lee:
SOHSite: incorporating evolutionary information and physicochemical properties to identify protein S-sulfenylation sites. BMC Genom. 17(S-1): 9 (2016) - 2015
- [j15]Van-Nui Nguyen, Kai-Yao Huang, Chien-Hsun Huang, Tzu-Hao Chang, Neil Arvin Bretaña
, K. Robert Lai, Julia Weng, Tzong-Yi Lee:
Characterization and identification of ubiquitin conjugation sites with E3 ligase recognition specificities. BMC Bioinform. 16(S-1): S1 (2015) - [j14]Kai-Yao Huang, Tzong-Yi Lee, Yu-Chuan Teng, Tzu-Hao Chang:
ViralmiR: a support-vector-machine-based method for predicting viral microRNA precursors. BMC Bioinform. 16(S-1): S9 (2015) - 2014
- [j13]Tzong-Yi Lee, Cheng-Wei Chang, Cheng-Tsung Lu, Tzu-Hsiu Cheng, Tzu-Hao Chang:
Identification and characterization of lysine-methylated sites on histones and non-histone proteins. Comput. Biol. Chem. 50: 11-18 (2014) - [j12]Chih-Min Chiu, Feng-Mao Lin, Tzu-Hao Chang, Wei-Chih Huang, Chao Liang, Ting Yang, Wei-Yun Wu, Tzu-Ling Yang, Shun-Long Weng, Hsien-Da Huang:
Clinical detection of human probiotics and human pathogenic bacteria by using a novel high-throughput platform based on next generation sequencing. J. Clin. Bioinform. 4: 1 (2014) - [j11]Sheng-Da Hsu
, Yu-Ting Tseng, Sirjana Shrestha
, Yu-Ling Lin, Anas Khaleel
, Chih-Hung Chou
, Chao-Fang Chu, Hsi-Yuan Huang, Ching-Min Lin, Shu-Yi Ho, Ting-Yan Jian, Feng-Mao Lin, Tzu-Hao Chang, Shun-Long Weng, Kuang-Wen Liao, I-En Liao, Chun-Chi Liu, Hsien-Da Huang:
miRTarBase update 2014: an information resource for experimentally validated miRNA-target interactions. Nucleic Acids Res. 42(Database-Issue): 78-85 (2014) - 2013
- [j10]Kai-Yao Huang, Cheng-Tsung Lu, Neil Arvin Bretaña
, Tzong-Yi Lee, Tzu-Hao Chang:
ViralPhos: incorporating a recursively statistical method to predict phosphorylation sites on virus proteins. BMC Bioinform. 14(S-16): S10 (2013) - [j9]Tzu-Hao Chang, Hsi-Yuan Huang, Justin Bo-Kai Hsu, Shun-Long Weng, Jorng-Tzong Horng, Hsien-Da Huang:
An enhanced computational platform for investigating the roles of regulatory RNA and for identifying functional RNA motifs. BMC Bioinform. 14(S-2): S4 (2013) - [j8]Chih-Hung Chou
, Feng-Mao Lin, Min-Te Chou, Sheng-Da Hsu
, Tzu-Hao Chang, Shun-Long Weng, Sirjana Shrestha
, Chiung-Chih Hsiao, Jui-Hung Hung
, Hsien-Da Huang:
A computational approach for identifying microRNA-target interactions using high-throughput CLIP and PAR-CLIP sequencing. BMC Genom. 14(S-1): S2 (2013) - [j7]Tzu-Hao Chang
, Li-Ching Wu, Tzong-Yi Lee, Shu-Pin Chen, Hsien-Da Huang, Jorng-Tzong Horng:
EuLoc: a web-server for accurately predict protein subcellular localization in eukaryotes by incorporating various features of sequence segments into the general form of Chou's PseAAC. J. Comput. Aided Mol. Des. 27(1): 91-103 (2013) - [c2]Chih-Min Chiu, Feng-Mao Lin, Tzu-Hao Chang, Wei-Chih Huang, Chao Liang, Wei-Yun Wu, Tzu-Ling Yang, Shun-Long Weng, Hsien-Da Huang:
Clinical detection of human probiotics and human pathogenic bacteria by using a novel high-throughput platform based on next generation sequencing. IWBBIO 2013: 29-40 - 2012
- [j6]Tzong-Yi Lee, Wen-Chi Chang
, Justin Bo-Kai Hsu, Tzu-Hao Chang, Dray-Ming Shien:
GPMiner: an integrated system for mining combinatorial cis-regulatory elements in mammalian gene group. BMC Genom. 13(S-1): S3 (2012) - [j5]Wei-Chih Huang, Feng-Mao Lin, Tzu-Hao Chang
, Kuang-Wen Liao, Hsien-Da Huang:
Identifying cancer highly-expressed membrane receptors for targeted drug delivery. Int. J. Bioinform. Res. Appl. 8(3/4): 192-209 (2012) - 2011
- [j4]Tzu-Hao Chang
, Li-Ching Wu, Yu-Ting Chen, Hsien-Da Huang, Baw-Jhiune Liu, Kuang-Fu Cheng, Jorng-Tzong Horng:
Characterization and prediction of mRNA polyadenylation sites in human genes. Medical Biol. Eng. Comput. 49(4): 463-472 (2011) - 2010
- [j3]Tzu-Hao Chang
, Li-Ching Wu, Jun-Hong Lin, Hsien-Da Huang, Baw-Jhiune Liu, Kuang-Fu Cheng, Jorng-Tzong Horng:
Prediction of small non-coding RNA in bacterial genomes using support vector machines. Expert Syst. Appl. 37(8): 5549-5557 (2010)
2000 – 2009
- 2009
- [c1]Tzu-Hao Chang
, Li-Ching Wu, Chi-Ta Yeh, Cheng-Wei Chang, Baw-Jhiune Liu, Hsien-Da Huang, Jorng-Tzong Horng:
RiboSW . BIBE 2009: 260-265 - 2008
- [j2]Tzu-Hao Chang
, Jorng-Tzong Horng, Hsien-Da Huang:
RNALogo: a new approach to display structural RNA alignment. Nucleic Acids Res. 36(Web-Server-Issue): 91-96 (2008) - 2006
- [j1]Tzu-Hao Chang
, Hsien-Da Huang, Tzu-Neng Chuang, Dray-Ming Shien, Jorng-Tzong Horng:
RNAMST: efficient and flexible approach for identifying RNA structural homologs. Nucleic Acids Res. 34(Web-Server-Issue): 423-428 (2006)
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