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ORCIDAxel Mosig
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- affiliation: Ruhr-University Bochum, Center for Protein Diagnostics, Germany
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Books and Theses
- 2003
[b1]Axel Mosig:
Efficient algorithms for shape and pattern matching. University of Bonn, Germany, 2003, pp. 1-111
Journal Articles
- 2022
- [j15]David Schuhmacher, Stephanie Schörner
, Claus Küpper, Frederik Großerüschkamp, Carlo Sternemann, Celine Lugnier, Anna-Lena Kraeft, Hendrik Jütte, Andrea Tannapfel, Anke Reinacher-Schick, Klaus Gerwert, Axel Mosig:
A framework for falsifiable explanations of machine learning models with an application in computational pathology. Medical Image Anal. 82: 102594 (2022) - [j14]Vivian B. Brandenburg, Franz Narberhaus, Axel Mosig:
Inverse folding based pre-training for the reliable identification of intrinsic transcription terminators. PLoS Comput. Biol. 18(7) (2022) - 2021
- [j13]Leonie Selbach, Tobias Kowalski, Klaus Gerwert, Maike Buchin, Axel Mosig:
Shape decomposition algorithms for laser capture microdissection. Algorithms Mol. Biol. 16(1): 15 (2021) - 2020
- [j12]Arne P. Raulf, Joshua Butke, Claus Küpper, Frederik Großerüschkamp, Klaus Gerwert, Axel Mosig:
Deep representation learning for domain adaptable classification of infrared spectral imaging data. Bioinform. 36(1): 287-294 (2020) - 2015
- [j11]Chen Yang, Daniel Niedieker, Frederik Großerüschkamp, Melanie Horn, Andrea Tannapfel, Angela Kallenbach-Thieltges, Klaus Gerwert, Axel Mosig:
Fully automated registration of vibrational microspectroscopic images in histologically stained tissue sections. BMC Bioinform. 16: 396:1-396:14 (2015) - 2013
- [j10]Qiaoyong Zhong, Chen Yang, Frederik Großerüschkamp, Angela Kallenbach-Thieltges, Peter Serocka, Klaus Gerwert, Axel Mosig:
Similarity maps and hierarchical clustering for annotating FT-IR spectral images. BMC Bioinform. 14: 333 (2013) - 2011
- [j9]Hang Xiao, Ying Li, Jiulin Du, Axel Mosig:
Ct3d: tracking microglia motility in 3D using a novel cosegmentation approach. Bioinform. 27(4): 564-571 (2011) - 2010
- [j8]Guofeng Meng, Axel Mosig, Martin Vingron:
A computational evaluation of over-representation of regulatory motifs in the promoter regions of differentially expressed genes. BMC Bioinform. 11: 267 (2010) - 2009
- [j7]Axel Mosig, Stefan Jäger, Chaofeng Wang, Sumit Kumar Nath, Ilker Ersoy, Kannappan Palaniappan, Su-Shing Chen:
Tracking cells in Life Cell Imaging videos using topological alignments. Algorithms Mol. Biol. 4 (2009) - [j6]Axel Mosig, Türker Bíyíkoglu, Sonja J. Prohaska, Peter F. Stadler:
Discovering cis-regulatory modules by optimizing barbecues. Discret. Appl. Math. 157(10): 2458-2468 (2009) - 2007
- [j5]Manja Marz, Axel Mosig, Bärbel M. R. Stadler, Peter F. Stadler:
U7 snRNAs: A Computational Survey. Genom. Proteom. Bioinform. 5(3-4): 187-195 (2007) - [j4]Axel Mosig, Guofeng Meng, Bärbel M. R. Stadler, Peter F. Stadler:
Evolution of the vertebrate Y RNA cluster. Theory Biosci. 126(1): 9-14 (2007) - 2006
- [j3]Axel Mosig, Katrin Sameith, Peter F. Stadler:
Fragrep: An Efficient Search Tool for Fragmented Patterns in Genomic Sequences. Genom. Proteom. Bioinform. 4(1): 56-60 (2006) - 2005
- [j2]Axel Mosig, Michael Clausen:
Approximately matching polygonal curves with respect to the Fre'chet distance. Comput. Geom. 30(2): 113-127 (2005) - [j1]Athanasius F. Bompfünewerer, Christoph Flamm, Claudia Fried, Guido Fritzsch, Ivo L. Hofacker, Jörg Lehmann, Kristin Missal, Axel Mosig, Bettina Müller, Sonja J. Prohaska, Bärbel M. R. Stadler, Peter F. Stadler, Andrea Tanzer, Stefan Washietl, Christina Witwer:
Evolutionary patterns of non-coding RNAs. Theory Biosci. 123(4): 301-369 (2005)
Conference and Workshop Papers
- 2021
- [c9]Joshua Butke, Tatjana Frick, Florian Roghmann, Samir F. El-Mashtoly, Klaus Gerwert, Axel Mosig:
End-to-end Multiple Instance Learning for Whole-Slide Cytopathology of Urothelial Carcinoma. COMPAY@MICCAI 2021: 57-68 - [c8]Arne P. Raulf, Sina Däubener, Ben Hack, Axel Mosig, Asja Fischer:
SmoothLRP: Smoothing LRP by Averaging over Stochastic Input Variations. ESANN 2021 - 2020
- [c7]Leonie Selbach, Tobias Kowalski, Klaus Gerwert, Maike Buchin, Axel Mosig:
Shape Decomposition Algorithms for Laser Capture Microdissection. WABI 2020: 13:1-13:17 - 2014
- [c6]Qiaoyong Zhong, Daniel Niedieker, Dennis Petersen, Klaus Gerwert, Axel Mosig:
Identifying minimally redundant wavenumbers for vibrational microspectroscopic image analysis. ICNC 2014: 856-861 - 2011
- [c5]Hang Xiao, Melvin Zhang, Axel Mosig, Hon Wai Leong:
Dynamic Programming Algorithms for Efficiently Computing Cosegmentations between Biological Images. WABI 2011: 339-350 - 2009
- [c4]David Damm, Chaofeng Wang, Xunbin Wei, Axel Mosig:
Cell Counting for In Vivo Flow Cytometer Signals Using Wavelet-Based Dynamic Peak Picking. BMEI 2009: 1-4 - 2007
- [c3]Axel Mosig, Peter Menzel, Peter F. Stadler:
Tanimoto's Best Barbecue: Discovering Regulatory Modules using Tanimoto Scores. German Conference on Bioinformatics 2007: 68-77 - [c2]Axel Mosig, Julian J.-L. Chen, Peter F. Stadler:
Homology Search with Fragmented Nucleic Acid Sequence Patterns. WABI 2007: 335-345 - 2006
- [c1]Axel Mosig, Ivo L. Hofacker, Peter F. Stadler:
Comparative Analysis of Cyclic Sequences: Viroids and other Small Circular RNAs. German Conference on Bioinformatics 2006: 93-102
Informal and Other Publications
- 2020
- [i3]Arne P. Raulf, Joshua Butke, Lukas Menzen, Claus Küpper, Frederik Großerüschkamp, Klaus Gerwert, Axel Mosig:
Deep Neural Networks for the Correction of Mie Scattering in Fourier-Transformed Infrared Spectra of Biological Samples. CoRR abs/2002.07681 (2020) - 2015
- [i2]Martin Eisenacher, Jörg Rahnenführer, Axel Mosig, Sven Rahmann:
Poster abstracts of GCB 2015. PeerJ Prepr. 3: e1350 (2015) - [i1]Axel Mosig, Jörg Rahnenführer, Martin Eisenacher, Sven Rahmann:
Invited presentations, junior research groups and research highlights at GCB 2015. PeerJ Prepr. 3: e1352 (2015)
Coauthor Index
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