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ORCIDOlga V. Patterson
Person information
- affiliation: University of Utah, , Salt Lake City, UT, USA
- affiliation: VA Salt Lake City Health Care System, UT, USA
- affiliation: GE Healthcare, Salt Lake City, UT, USA
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Journal Articles
- 2023
[j4]Vipina Kuttichi Keloth, Juan M. Banda, Michael J. Gurley, Paul M. Heider
, Georgina Kennedy, Hongfang Liu, Feifan Liu, Timothy Miller, Karthik Natarajan, Olga V. Patterson, Yifan Peng, Kalpana Raja, Ruth M. Reeves, Masoud Rouhizadeh, Jianlin Shi, Xiaoyan Wang, Yanshan Wang, Wei-Qi Wei, Andrew E. Williams, Rui Zhang, Rimma Belenkaya, Christian G. Reich, Clair Blacketer, Patrick B. Ryan, George Hripcsak, Noémie Elhadad, Hua Xu:
Representing and utilizing clinical textual data for real world studies: An OHDSI approach. J. Biomed. Informatics 142: 104343 (2023)- 2022
- [j3]Jorie M. Butler, Bryan Smith Gibson, Olga V. Patterson, Laura J. Damschroder, Corrinne H. Halls, Daniel W. Denhalter, Matthew H. Samore, Haojia Li, Yue Zhang, Scott L. DuVall:
Clinician documentation of patient centered care in the electronic health record. BMC Medical Informatics Decis. Mak. 22(1): 65 (2022) - 2021
- [j2]Braja Gopal Patra, Mohit Manoj Sharma, Veer Vekaria, Prakash Adekkanattu, Olga V. Patterson, Benjamin S. Glicksberg, Lauren A. Lepow, Euijung Ryu, Joanna M. Biernacka, Al'ona Furmanchuk, Thomas J. George, William R. Hogan, Yonghui Wu, Xi Yang, Jiang Bian, Myrna Weissman, Priya Wickramaratne, J. John Mann, Mark Olfson, Thomas R. Campion Jr., Mark G. Weiner, Jyotishman Pathak:
Extracting social determinants of health from electronic health records using natural language processing: a systematic review. J. Am. Medical Informatics Assoc. 28(12): 2716-2727 (2021) - 2007
- [j1]Jean A. Pratt, Karina Hauser, Zsolt Ugray, Olga V. Patterson:
Looking at human-computer interface design: Effects of ethnicity in computer agents. Interact. Comput. 19(4): 512-523 (2007)
Conference and Workshop Papers
- 2022
- [c40]Hannah Eyre, Scott L. DuVall, Olga V. Patterson:
From Rules to Machine Learning: Upgrading Aging Clinical NLP Systems. AMIA 2022 - [c39]Hannah Eyre, Kristine W. Lynch, Carolyn Gibson, Scott L. DuVall, Olga V. Patterson:
Identifying Menopausal Status with Natural Language Processing. AMIA 2022 - [c38]Christopher R. Wilson, Annie E. Bowles, Hannah Eyre, Scott L. DuVall, Olga V. Patterson:
Comprehensive Mapping of Presenting Symptoms in the Emergency Department and Inpatient Setting. AMIA 2022 - 2021
- [c37]Annie E. Bowles, Hannah Eyre, Scott L. DuVall, Olga V. Patterson:
Challenges of comprehensive automatic coding of presenting complaints. AMIA 2021 - [c36]Mike Conway, Patrick R. Alba, Shu-Hong Zhu, Olga V. Patterson:
Vaping at the VA: Developing an Annotated Corpus of Electronic Cigarette Mentions in Clinical Notes at the Department of Veterans Affairs. AMIA 2021 - [c35]Hannah Eyre, Alec B. Chapman, Kelly S. Peterson, Jianlin Shi, Patrick R. Alba, Makoto M. Jones, Tamara L. Box, Scott L. DuVall, Olga V. Patterson:
Launching into clinical space with medspaCy: a new clinical text processing toolkit in Python. AMIA 2021 - [c34]Olga V. Patterson, Hannah Eyre, Kelly S. Peterson, Scott L. DuVall:
From Emergency Department to Admission: mapping reasons for visit and admit diagnosis using Natural Language Processing. AMIA 2021 - 2020
- [c33]Patrick R. Alba, Olga V. Patterson, Mike Conway:
A Decade of Vaping: Identifying Shifts in Clinical Documentation and Terminology in the Department of Veterans Affairs (2010-2020). AMIA 2020 - [c32]Hannah Eyre, Olga V. Patterson, Jianlin Shi, Kelly S. Peterson, Alec B. Chapman, Patrick R. Alba, Scott L. DuVall:
Removing barriers to clinical text processing with MedSpaCy. AMIA 2020 - [c31]Olga V. Patterson, Samir Gupta, Andrew Gawron, Tonya Kaltenbach, Ranier Bustamante, Lin Liu, Daniel W. Denhalter, Ashley Earles, Scott L. DuVall:
Linking Polyps to Jars: information loss across colonoscopy and pathology reports. AMIA 2020 - 2019
- [c30]Patrick R. Alba, Olga V. Patterson, Joshua S. Richman, Scott L. DuVall:
Automatic Methods to Extract Prescription Status Quality Measures from Unstructured Health Records. MedInfo 2019: 15-19 - 2018
- [c29]Patrick R. Alba, Scott L. DuVall, Daniel Norvell, Kathryn P. Moore, Joseph M. Czerniecki, Olga V. Patterson:
Ankle Brachial Index Extraction System. AMIA 2018 - [c28]Alec B. Chapman, Patrick R. Alba, Brian T. Bucher, Scott L. DuVall, Olga V. Patterson:
A User-Friendly Interface for Concept Dictionary Expansion Using Word Embeddings and SNOMED-CT. AMIA 2018 - [c27]Rebecca Crowley Jacobson, Wendy W. Chapman, Hongfang Liu, Olga V. Patterson, Daniel S. Zisook:
Natural Language Processing at Scale - Perspectives from Five Healthcare Organizations. AMIA 2018 - [c26]Olga V. Patterson, Lalindra De Silva, Brad Adams, Ryan Cornia, Thomas Ginter, Susan L. Zickmund, Scott L. DuVall:
Towards intuitive NLP: Interactive system for machine teaching. AMIA 2018 - [c25]Kelly S. Peterson, Alec B. Chapman, Patrick R. Alba, Scott L. DuVall, Olga V. Patterson:
Fast and Accurate Adverse Drug Event labeling without a GPU. AMIA 2018 - [c24]Brett R. South, Kristine W. Lynch, Michael E. Matheny, Julie A. Lynch, Olga Efimova, Catherine Chanfreau-Coffinier, Olga V. Patterson, Benjamin Viernes, Scott L. DuVall:
Flipping the Model for Biomedical Informatics Research. AMIA 2018 - [c23]Alec B. Chapman, Kelly S. Peterson, Patrick R. Alba, Scott L. DuVall, Olga V. Patterson:
Hybrid system for adverse drug event detection. Medication and Adverse Drug Event Detection 2018: 16-24 - 2017
- [c22]Patrick R. Alba, Scott L. DuVall, Terri Elizabeth Workman, Florian Schroeck, Olga V. Patterson:
Pathology Information Extraction in Bladder Cancer Surveillance. AMIA 2017 - [c21]Daniel W. Denhalter, Olga V. Patterson, Brian D. Robison, Scott L. DuVall:
Improving the Quality of Clinical Data Extracted from Text. AMIA 2017 - [c20]Olga V. Patterson, Scott L. DuVall:
For the Common Good: Sharing Data Extracted from Text. AMIA 2017 - [c19]Danielle L. Mowery, Brett R. South, Olga V. Patterson, Shu-Hong Zhu, Mike Conway:
Investigating the Documentation of Electronic Cigarette Use in the Veteran Affairs Electronic Health Record: A Pilot Study. BioNLP 2017: 282-286 - 2016
- [c18]Patrick R. Alba, Olga V. Patterson, Benjamin Viernes, Daniel W. Denhalter, Nicole Bailey, Andrew Wilson, Aaron W. C. Kamauu, Scott L. DuVall:
The Super Annotator: A Method of Semi-Automated Rare Event Identification for Large Clinical Data Sets. AMIA 2016 - [c17]Scott L. DuVall, Patrick R. Alba, Olga V. Patterson:
Large Scale Clinical Text Processing and Process Optimization. AMIA 2016 - [c16]Thomas Ginter, Lalindra De Silva, Olga V. Patterson, William Scuba, Wendy W. Chapman, Scott L. DuVall:
VIP: A Framework for Mining Clinical Concepts Using Knowledge Author Ontologies and Apache UIMA. AMIA 2016 - [c15]Olga V. Patterson, Patrick R. Alba, Scott L. DuVall:
An Introduction to Natural Language Processing Methods in Clinical Research. AMIA 2016 - [c14]Olga V. Patterson, Matthew Freiberg, Cynthia Brandt, Scott L. DuVall:
Evaluation of UMLS Term Coverage for Echocardiogram Measures. AMIA 2016 - [c13]Lalindra De Silva, Olga V. Patterson, Scott L. DuVall:
Automatic Extraction of Maximum and Recommended Drug Dosage Information from DailyMed Database. AMIA 2016 - 2015
- [c12]Patrick R. Alba, Scott L. DuVall, Joanne LaFleur, Adam Bress, Olga V. Patterson:
Knowledge Base Acquisition For Rare Concepts Using Manual Bootstrapping. AMIA 2015 - [c11]Olga V. Patterson, Matthew Freiberg, Scott L. DuVall:
Building custom lexicon for a large number of related concepts using templates. AMIA 2015 - [c10]Olga V. Patterson, Tyler B. Forbush, Sameer D. Saini, Stephanie E. Moser, Scott L. DuVall:
Classifying the Indication for Colonoscopy Procedures: A Comparison of NLP Approaches in a Diverse National Healthcare System. MedInfo 2015: 614-618 - [c9]Olga V. Patterson, Makoto Jones, Yiwen Yao, Benjamin Viernes, Patrick R. Alba, Theodore J. Iwashyna, Scott L. DuVall:
Extraction of Vital Signs from Clinical Notes. MedInfo 2015: 1035 - 2014
- [c8]Ryan Cornia, Olga V. Patterson, Thomas Ginter, Scott L. DuVall:
Rapid NLP Development with Leo. AMIA 2014 - [c7]Scott L. DuVall, Ryan Cornia, Tyler B. Forbush, Corinne Halls, Olga V. Patterson:
Check it with Chex: A Validation Tool for Iterative NLP Development. AMIA 2014 - [c6]Thomas Ginter, Olga V. Patterson, Ryan Cornia, Scott L. DuVall:
Machine Learning Made Easy with Sherlock. AMIA 2014 - [c5]Olga V. Patterson, Scott D. Nelson, Makoto L. Jones, Kimberly Findley, Kevin L. Winthrop, Kevin P. Fennelly, Scott L. DuVall:
Automatic Engine for Mapping Mycobacteriology Reports to SNOMED-CT. AMIA 2014 - 2013
- [c4]Kristina Doing-Harris, Olga V. Patterson, Sean Igo, John F. Hurdle:
Document sublanguage clustering to detect medical specialty in cross-institutional clinical texts. DTMBIO 2013: 9-12 - [c3]Olga V. Patterson, Thomas Ginter, Scott L. DuVall:
Building a Common Pipeline for Rule-based Document Classification. MedInfo 2013: 1211 - 2012
- [c2]Ryan Cornia, Olga V. Patterson, Scott L. DuVall:
JMX Analysis Module: Multi-thread aggregate NLP performance monitoring. AMIA 2012 - [c1]Olga V. Patterson, Gail S. Kerr, J. Steuart Richards, Carl A. Nunziato, David D. Maron, Richard L. Amdur, Scott L. DuVall:
Identifying Provider Counseling Practices Using Natural Language Processing: Gout Example. HISB 2012: 127
Informal and Other Publications
- 2021
- [i1]Hannah Eyre, Alec B. Chapman, Kelly S. Peterson, Jianlin Shi, Patrick R. Alba, Makoto M. Jones, Tamara L. Box, Scott L. DuVall, Olga V. Patterson:
Launching into clinical space with medspaCy: a new clinical text processing toolkit in Python. CoRR abs/2106.07799 (2021)
Coauthor Index
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