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Harold R. Garner
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2020 – today
- 2021
- [c2]Sajal Dash
, Qais Al-Hajri, Wu-chun Feng, Harold R. Garner, Ramu Anandakrishnan:
Scaling Out a Combinatorial Algorithm for Discovering Carcinogenic Gene Combinations to Thousands of GPUs. IPDPS 2021: 837-846
2010 – 2019
- 2019
- [j25]Nicholas Kinney
, Kyle Titus-Glover, Jonathan D. Wren
, Robin T. Varghese, Pawel Michalak, Han Liao, Ramu Anandakrishnan
, Arichanah Pulenthiran, Lin Kang
, Harold R. Garner:
CAGm: a repository of germline microsatellite variations in the 1000 genomes project. Nucleic Acids Res. 47(Database-Issue): D39-D45 (2019) - [j24]Ramu Anandakrishnan
, Robin T. Varghese, Nicholas Kinney
, Harold R. Garner:
Estimating the number of genetic mutations (hits) required for carcinogenesis based on the distribution of somatic mutations. PLoS Comput. Biol. 15(3) (2019) - 2018
- [j23]Fred Rawlins, Cameron Sumpter, Dean Sutphin, Harold R. Garner:
Quantifying medical student clinical experiences via an ICD Code Logging App. Int. J. Medical Informatics 111: 51-57 (2018) - 2014
- [j22]Hongseok Tae, Enusha Karunasena
, Jasmin H. Bavarva, Harold R. Garner:
Updating microbial genomic sequences: improving accuracy & innovation. BioData Min. 7: 25 (2014) - [j21]Hongseok Tae, Dong-Yun Kim, John McCormick, Robert E. Settlage, Harold R. Garner:
Discretized Gaussian mixture for genotyping of microsatellite loci containing homopolymer runs. Bioinform. 30(5): 652-659 (2014) - [j20]W. James Dittmar, Lauren McIver, Pawel Michalak, Harold R. Garner, Gregorio Valdez:
EvoCor: a platform for predicting functionally related genes using phylogenetic and expression profiles. Nucleic Acids Res. 42(Webserver-Issue): 72-75 (2014) - [j19]Harold R. Garner, Ashwin Puthige:
BioFlow: a web based workflow management software for design and execution of genomics pipelines. Source Code Biol. Medicine 9: 20 (2014) - 2013
- [j18]Hongseok Tae, Kevin W. McMahon, Robert E. Settlage, Jasmin H. Bavarva, Harold R. Garner:
ReviSTER: an automated pipeline to revise misaligned reads to simple tandem repeats. Bioinform. 29(14): 1734-1741 (2013) - 2010
- [j17]Mounir Errami, Zhaohui Sun, Angela C. George, Tara C. Long, Michael A. Skinner, Jonathan D. Wren
, Harold R. Garner:
Identifying duplicate content using statistically improbable phrases. Bioinform. 26(11): 1453-1457 (2010)
2000 – 2009
- 2009
- [j16]Niclas Chiang Tan, Wayne G. Fisher, Kevin P. Rosenblatt, Harold R. Garner:
Application of multiple statistical tests to enhance mass spectrometry-based biomarker discovery. BMC Bioinform. 10 (2009) - [j15]Mounir Errami, Zhaohui Sun, Tara C. Long, Angela C. George, Harold R. Garner:
Déjà vu: a database of highly similar citations in the scientific literature. Nucleic Acids Res. 37(Database-Issue): 921-924 (2009) - 2008
- [j14]Mounir Errami, Justin M. Hicks, Wayne G. Fisher, David Trusty, Jonathan D. Wren
, Tara C. Long, Harold R. Garner:
Déjà vu - A study of duplicate citations in Medline. Bioinform. 24(2): 243-249 (2008) - [j13]Vinayak Kulkarni, Mounir Errami, Robert Barber, Harold R. Garner:
Exhaustive prediction of disease susceptibility to coding base changes in the human genome. BMC Bioinform. 9(S-9) (2008) - 2007
- [j12]Mark F. Burkart, Jonathan D. Wren
, Jason I. Herschkowitz, Charles M. Perou
, Harold R. Garner:
Clustering microarray-derived gene lists through implicit literature relationships. Bioinform. 23(15): 1995-2003 (2007) - [j11]Jyoti K. Shah, Harold R. Garner, Michael A. White, David S. Shames
, John D. Minna:
sIR: siRNA Information Resource, a web-based tool for siRNA sequence design and analysis and an open access siRNA database. BMC Bioinform. 8 (2007) - [j10]Wayne G. Fisher, Kevin P. Rosenblatt, David A. Fishman, Gordon R. Whiteley, Alvydas Mikulskis, Scott A. Kuzdzal, Mary F. Lopez, Niclas Chiang Tan, Dwight C. German, Harold R. Garner:
A Robust Biomarker Discovery Pipeline for High-Performance Mass Spectrometry Data. J. Bioinform. Comput. Biol. 5(5): 1023-1045 (2007) - [j9]Mounir Errami, Jonathan D. Wren
, Justin M. Hicks, Harold R. Garner:
eTBLAST: a web server to identify expert reviewers, appropriate journals and similar publications. Nucleic Acids Res. 35(Web-Server-Issue): 12-15 (2007) - 2006
- [j8]James Lewis, Stephan Ossowski
, Justin M. Hicks, Mounir Errami, Harold R. Garner:
Text similarity: an alternative way to search MEDLINE. Bioinform. 22(18): 2298-2304 (2006) - 2005
- [j7]Yun Lian, Harold R. Garner:
Evidence for the regulation of alternative splicing via complementary DNA sequence repeats. Bioinform. 21(8): 1358-1364 (2005) - [j6]Jonathan D. Wren
, Jeffrey T. Chang, James Pustejovsky, Eytan Adar, Harold R. Garner, Russ B. Altman:
Biomedical term mapping databases. Nucleic Acids Res. 33(Database-Issue): 289-293 (2005) - 2004
- [j5]Jonathan D. Wren
, Harold R. Garner:
Shared relationship analysis: ranking set cohesion and commonalities within a literature-derived relationship network. Bioinform. 20(2): 191-198 (2004) - [j4]Jonathan D. Wren
, Raffi Bekeredjian, Jelena A. Stewart, Ralph V. Shohet, Harold R. Garner:
Knowledge discovery by automated identification and ranking of implicit relationships. Bioinform. 20(3): 389-398 (2004) - 2002
- [j3]Amit V. Kulkarni, Noelle Sevilir Williams, Yun Lian, Jonathan D. Wren
, David Mittelman, Alexander Pertsemlidis, Harold R. Garner:
ARROGANT: an application to manipulate large gene collections. Bioinform. 18(11): 1410-1417 (2002) - [j2]Jonathan D. Wren
, David A. Mittelman, Harold R. Garner:
SIGNAL-Sequence Information and GeNomic AnaLysis. Comput. Methods Programs Biomed. 68(2): 177-181 (2002) - [c1]Harold R. Garner:
Applied computational genomics: polymorphism prediction, data mining and genomic analysis. RECOMB 2002: 165 - 2000
- [j1]Birong Liao, Walker Hale, Charles B. Epstein
, Ronald A. Butow, Harold R. Garner:
MAD: a suite of tools for microarray data management and processing. Bioinform. 16(10): 946-947 (2000)
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