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Shaika Chowdhury
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2020 – today
- 2024
- [j2]Shaika Chowdhury, Yongbin Chen, Pengyang Li, Sivaraman Rajaganapathy, Andrew Wen, Xiao Ma, Qiying Dai, Yue Yu, Sunyang Fu, Xiaoqian Jiang, Zhe He, Sunghwan Sohn, Xiaoke Liu, Suzette J. Bielinski, Alanna M. Chamberlain, James R. Cerhan, Nansu Zong:
Stratifying heart failure patients with graph neural network and transformer using Electronic Health Records to optimize drug response prediction. J. Am. Medical Informatics Assoc. 31(8): 1671-1681 (2024) - 2023
- [c6]Shaika Chowdhury, Yongbin Chen, Xiao Ma, Qiying Dai, Yue Yu, Nansu Zong:
Evaluating Drug Effectiveness for Antihypertensives in Heart Failure Prognosis: Leveraging Composite Clinical Endpoints and Biomarkers from Electronic Health Records. BCB 2023: 34:1-34:6 - [i7]Shaika Chowdhury, Sivaraman Rajaganapathy, Lichao Sun, James R. Cerhan, Nansu Zong:
Evaluation of GPT-3 for Anti-Cancer Drug Sensitivity Prediction. CoRR abs/2309.10016 (2023) - 2022
- [j1]Nansu Zong, Ning Li, Andrew Wen, Victoria Ngo, Yue Yu, Ming Huang, Shaika Chowdhury, Chao Jiang, Sunyang Fu, Richard Weinshilboum, Guoqian Jiang, Lawrence Hunter, Hongfang Liu:
BETA: a comprehensive benchmark for computational drug-target prediction. Briefings Bioinform. 23(4) (2022) - 2021
- [c5]Shaika Chowdhury, Halid Ziya Yerebakan, Yoshihisa Shinagawa, Philip S. Yu:
MedTextSeg: A Deep Dual Sequential Model for Section Segmentation in Medical Reports. IEEE BigData 2021: 1582-1588 - [c4]Shaika Chowdhury, Naouel Baili, Brian Vannah:
Ensemble Fine-tuned mBERT for Translation Quality Estimation. WMT@EMNLP 2021: 897-903 - [i6]Shaika Chowdhury, Naouel Baili, Brian Vannah:
Ensemble Fine-tuned mBERT for Translation Quality Estimation. CoRR abs/2109.03914 (2021) - 2020
- [c3]Shaika Chowdhury, Chenwei Zhang, Philip S. Yu, Yuan Luo:
Med2Meta: Learning Representations of Medical Concepts with Meta-embeddings. HEALTHINF 2020: 369-376 - [c2]Shaika Chowdhury, Philip S. Yu, Yuan Luo:
Improving Medical NLI Using Context-Aware Domain Knowledge. *SEM@COLING 2020: 1-11 - [i5]Ye Liu, Shaika Chowdhury, Chenwei Zhang, Cornelia Caragea, Philip S. Yu:
Interpretable Multi-Step Reasoning with Knowledge Extraction on Complex Healthcare Question Answering. CoRR abs/2008.02434 (2020)
2010 – 2019
- 2019
- [i4]Shaika Chowdhury, Chenwei Zhang, Philip S. Yu, Yuan Luo:
Mixed Pooling Multi-View Attention Autoencoder for Representation Learning in Healthcare. CoRR abs/1910.06456 (2019) - [i3]Shaika Chowdhury, Chenwei Zhang, Philip S. Yu, Yuan Luo:
Hierarchical Semantic Correspondence Learning for Post-Discharge Patient Mortality Prediction. CoRR abs/1910.06492 (2019) - [i2]Shaika Chowdhury, Chenwei Zhang, Philip S. Yu, Yuan Luo:
Med2Meta: Learning Representations of Medical Concepts with Meta-Embeddings. CoRR abs/1912.03366 (2019) - 2018
- [c1]Shaika Chowdhury, Chenwei Zhang, Philip S. Yu:
Multi-Task Pharmacovigilance Mining from Social Media Posts. WWW 2018: 117-126 - [i1]Shaika Chowdhury, Chenwei Zhang, Philip S. Yu:
Multi-Task Pharmacovigilance Mining from Social Media Posts. CoRR abs/1801.06294 (2018)
Coauthor Index
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