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Arjun Magge
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Journal Articles
- 2021
- [j6]Arjun Magge, Elena Tutubalina, Zulfat Miftahutdinov, Ilseyar Alimova, Anne Dirkson, Suzan Verberne, Davy Weissenbacher, Graciela Gonzalez-Hernandez:
DeepADEMiner: a deep learning pharmacovigilance pipeline for extraction and normalization of adverse drug event mentions on Twitter. J. Am. Medical Informatics Assoc. 28(10): 2184-2192 (2021) - 2020
- [j5]Arjun Magge, Davy Weissenbacher, Karen O'Connor, Tasnia Tahsin, Graciela Gonzalez-Hernandez, Matthew Scotch:
GeoBoost2: a natural languageprocessing pipeline for GenBank metadata enrichment for virus phylogeography. Bioinform. 36(20): 5120-5121 (2020) - 2019
- [j4]Arjun Magge, Abeed Sarker, Azadeh Nikfarjam, Graciela Gonzalez-Hernandez:
Comment on: "Deep learning for pharmacovigilance: recurrent neural network architectures for labeling adverse drug reactions in Twitter posts". J. Am. Medical Informatics Assoc. 26(6): 577-579 (2019) - [j3]Davy Weissenbacher, Abeed Sarker, Ari Z. Klein, Karen O'Connor, Arjun Magge, Graciela Gonzalez-Hernandez:
Deep neural networks ensemble for detecting medication mentions in tweets. J. Am. Medical Informatics Assoc. 26(12): 1618-1626 (2019) - 2018
- [j2]Tasnia Tahsin, Davy Weissenbacher, Karen O'Connor, Arjun Magge, Matthew Scotch, Graciela Gonzalez-Hernandez:
GeoBoost: accelerating research involving the geospatial metadata of virus GenBank records. Bioinform. 34(9): 1606-1608 (2018) - [j1]Arjun Magge, Davy Weissenbacher, Abeed Sarker, Matthew Scotch, Graciela Gonzalez-Hernandez:
Deep neural networks and distant supervision for geographic location mention extraction. Bioinform. 34(13): i565-i573 (2018)
Conference and Workshop Papers
- 2022
- [c11]Davy Weissenbacher, Juan M. Banda, Vera Davydova, Darryl Estrada-Zavala, Luis Gascó Sánchez, Yao Ge, Yuting Guo, Ari Z. Klein, Martin Krallinger, Mathias Leddin, Arjun Magge, Raul Rodriguez-Esteban, Abeed Sarker, Ana Lucía Schmidt, Elena Tutubalina, Graciela Gonzalez-Hernandez:
Overview of the Seventh Social Media Mining for Health Applications (#SMM4H) Shared Tasks at COLING 2022. SMM4H@COLING 2022: 221-241 - 2021
- [c10]Davy Weissenbacher, Siddharth Rawal, Arjun Magge, Graciela Gonzalez-Hernandez:
Addressing Extreme Imbalance for Detecting Medications Mentioned in Twitter User Timelines. AIME 2021: 93-102 - [c9]Arjun Magge, Ari Z. Klein, Antonio Miranda-Escalada, Mohammed Ali Al-Garadi, Ilseyar Alimova, Zulfat Miftahutdinov, Eulàlia Farré, Salvador Lima-López, Ivan Flores, Karen O'Connor, Davy Weissenbacher, Elena Tutubalina, Abeed Sarker, Juan M. Banda, Martin Krallinger, Graciela Gonzalez-Hernandez:
Overview of the Sixth Social Media Mining for Health Applications (#SMM4H) Shared Tasks at NAACL 2021. SMM4H@NAACL-HLT 2021: 21-32 - 2020
- [c8]Arjun Magge, Varad Pimpalkhute, Divya Rallapalli, David Siguenza, Graciela Gonzalez-Hernandez:
UPennHLP at WNUT-2020 Task 2 : Transformer models for classification of COVID19 posts on Twitter. W-NUT@EMNLP 2020: 378-382 - [c7]Ari Z. Klein, Ilseyar Alimova, Ivan Flores, Arjun Magge, Zulfat Miftahutdinov, Anne-Lyse Minard, Karen O'Connor, Abeed Sarker, Elena Tutubalina, Davy Weissenbacher, Graciela Gonzalez-Hernandez:
Overview of the Fifth Social Media Mining for Health Applications (#SMM4H) Shared Tasks at COLING 2020. SMM4H@COLING 2020: 27-36 - 2019
- [c6]Arjun Magge, Davy Weissenbacher, Abeed Sarker, Matthew Scotch, Graciela Gonzalez-Hernandez:
Bi-directional Recurrent Neural Network Models for Geographic Location Extraction in Biomedical Literature. PSB 2019: 100-111 - [c5]Davy Weissenbacher, Arjun Magge, Karen O'Connor, Matthew Scotch, Graciela Gonzalez-Hernandez:
SemEval-2019 Task 12: Toponym Resolution in Scientific Papers. SemEval@NAACL-HLT 2019: 907-916 - [c4]Davy Weissenbacher, Abeed Sarker, Arjun Magge, Ashlynn R. Daughton, Karen O'Connor, Michael J. Paul, Graciela Gonzalez-Hernandez:
Overview of the Fourth Social Media Mining for Health (SMM4H) Shared Tasks at ACL 2019. SMM4H@ACL 2019: 21-30 - 2018
- [c3]Masoud Rouhizadeh, Arjun Magge, Ari Z. Klein, Abeed Sarker, Graciela Gonzalez:
A Rule-based Approach to Determining Pregnancy Timeframe from Contextual Social Media Postings. DH 2018: 16-20 - [c2]Arjun Magge, Matthew Scotch, Graciela Gonzalez-Hernandez:
Clinical NER and Relation Extraction using Bi-Char-LSTMs and Random Forest Classifiers. Medication and Adverse Drug Event Detection 2018: 25-30 - 2017
- [c1]Arjun Magge, Matthew Scotch, Graciela Gonzalez:
CSaRUS-CNN at AMIA-2017 Tasks 1, 2: Under Sampled CNN for Text Classification. SMM4H@AMIA 2017: 76-78
Editorship
- 2021
- [e2]Arjun Magge, Ari Z. Klein, Antonio Miranda-Escalada, Mohammed Ali Al-garadi, Ilseyar Alimova, Zulfat Miftahutdinov, Eulàlia Farré-Maduell, Salvador Lima-López, Ivan Flores, Karen O'Connor, Davy Weissenbacher, Elena Tutubalina, Abeed Sarker, Juan M. Banda, Martin Krallinger, Graciela Gonzalez-Hernandez:
Proceedings of the Sixth Social Media Mining for Health Workshop and Shared Task, SMM4H@NAACL-HLT 2021, Mexico City, Mexico, June 10, 2021. Association for Computational Linguistics 2021, ISBN 978-1-954085-31-2 [contents] - 2020
- [e1]Graciela Gonzalez-Hernandez, Ari Z. Klein, Ivan Flores, Davy Weissenbacher, Arjun Magge, Karen O'Connor, Abeed Sarker, Anne-Lyse Minard, Elena Tutubalina, Zulfat Miftahutdinov, Ilseyar Alimova:
Proceedings of the Fifth Social Media Mining for Health Applications Workshop & Shared Task, SMM4H@COLING 2020, Barcelona, Spain (Online), December 12, 2020. Association for Computational Linguistics 2020, ISBN 978-1-952148-41-5 [contents]
Informal and Other Publications
- 2021
- [i3]Ari Z. Klein, Arjun Magge, Graciela Gonzalez-Hernandez:
ReportAGE: Automatically extracting the exact age of Twitter users based on self-reports in tweets. CoRR abs/2103.06357 (2021) - 2019
- [i2]Davy Weissenbacher, Abeed Sarker, Ari Z. Klein, Karen O'Connor, Arjun Magge Ranganatha, Graciela Gonzalez-Hernandez:
Deep Neural Networks Ensemble for Detecting Medication Mentions in Tweets. CoRR abs/1904.05308 (2019) - 2017
- [i1]Pramod Bharadwaj Chandrashekar, Arjun Magge, Abeed Sarker, Graciela Gonzalez:
Social media mining for identification and exploration of health-related information from pregnant women. CoRR abs/1702.02261 (2017)
Coauthor Index
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